2024-05-09T22:57:14,996 Created temporary directory: /tmp/pip-build-tracker-qp590_2m 2024-05-09T22:57:14,997 Initialized build tracking at /tmp/pip-build-tracker-qp590_2m 2024-05-09T22:57:14,998 Created build tracker: /tmp/pip-build-tracker-qp590_2m 2024-05-09T22:57:14,998 Entered build tracker: /tmp/pip-build-tracker-qp590_2m 2024-05-09T22:57:14,999 Created temporary directory: /tmp/pip-wheel-loj8xugz 2024-05-09T22:57:15,002 Created temporary directory: /tmp/pip-ephem-wheel-cache-27ku3l_q 2024-05-09T22:57:15,024 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-09T22:57:15,028 2 location(s) to search for versions of protein-design-tools: 2024-05-09T22:57:15,028 * https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:57:15,028 * https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:57:15,029 Fetching project page and analyzing links: https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:57:15,030 Getting page https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:57:15,031 Found index url https://pypi.org/simple/ 2024-05-09T22:57:15,181 Fetched page https://pypi.org/simple/protein-design-tools/ as application/vnd.pypi.simple.v1+json 2024-05-09T22:57:15,184 Found link https://files.pythonhosted.org/packages/ed/a6/a527cb82986e54d8bf9c1f1de71036e3474c6fde773c40dbdcd2e857793e/protein-design-tools-0.1.0.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.0 2024-05-09T22:57:15,185 Found link https://files.pythonhosted.org/packages/99/f2/9710ed6b56c764ed7ecb1035655952234d65fef841aa220f727e7dc58c58/protein_design_tools-0.1.1.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.1 2024-05-09T22:57:15,186 Found link https://files.pythonhosted.org/packages/b2/8e/8559cd3b6f8454390d45afb9015819cdb01aa51ed9b53b64b044b9342bb2/protein_design_tools-0.1.3.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.3 2024-05-09T22:57:15,187 Found link https://files.pythonhosted.org/packages/05/90/17c62aa7320a475051eea3f857d854065f49e1c6e241816662de784d4495/protein_design_tools-0.1.4.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.4 2024-05-09T22:57:15,188 Found link https://files.pythonhosted.org/packages/2b/4f/e576ff4b0c17f92a752670ae249b18c4b22681d162b3ea54eb7c8187e934/protein-design-tools-0.1.5.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.5 2024-05-09T22:57:15,189 Found link https://files.pythonhosted.org/packages/2e/43/6bbc489853ecce726a00644099615c17b574b2fe318c53409f7071eb1829/protein_design_tools-0.1.6.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.6 2024-05-09T22:57:15,190 Found link https://files.pythonhosted.org/packages/6c/af/d4f52f5271c5185dcb0683fdea82ccd34534111b732c96913ee6cee20ba2/protein_design_tools-0.1.7.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.7 2024-05-09T22:57:15,191 Found link https://files.pythonhosted.org/packages/14/24/a1d06b818f3d46d7318b86f0334181bb8b9134f71856b2a0ca69ea24d040/protein_design_tools-0.1.8.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.8 2024-05-09T22:57:15,192 Found link https://files.pythonhosted.org/packages/9c/73/da486d6ea5db2b79ee4188d258d6b13734e412cf0c16cc9d40d09900699d/protein_design_tools-0.1.9.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.9 2024-05-09T22:57:15,193 Found link https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.10 2024-05-09T22:57:15,194 Found link https://files.pythonhosted.org/packages/be/d1/7552b3dafe349a6c0b89507eaf0b75338f5fa977b281f546bb30649942b7/protein_design_tools-0.1.11.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.11 2024-05-09T22:57:15,195 Found link https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.12 2024-05-09T22:57:15,196 Fetching project page and analyzing links: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:57:15,197 Getting page https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:57:15,198 Found index url https://www.piwheels.org/simple/ 2024-05-09T22:57:15,438 Fetched page https://www.piwheels.org/simple/protein-design-tools/ as text/html 2024-05-09T22:57:15,442 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.11-py3-none-any.whl#sha256=3c7c4f05ad2996e49f7f0832d581ec72b0517cd4e0f986e845108c0a6e58acb8 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,443 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.10-py3-none-any.whl#sha256=d7e2a99fe064326d2b4c1fcc6ee98dc054b35d1ceccb8fe8665a0310c2d5dde3 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,443 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.9-py3-none-any.whl#sha256=5acbaf40f239e41b61fb581d11ea8a230ca5197b170159850bc93cd3403976f6 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,444 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.8-py3-none-any.whl#sha256=f1747869a6004c8e1f0fb378cf55ab0df7c666a0a419414de8b98d92cacb2132 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,444 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.7-py3-none-any.whl#sha256=0e32edd830836de2ef77b03f2375ddd185dabc9fec3b9b9983f05b4f4d545a26 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,445 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.6-py3-none-any.whl#sha256=b7597266a06dd8c3544dd12e69d278db111719d068166100b2fde95e5438a85d (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,445 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.5-py3-none-any.whl#sha256=d39131f1daa2a71dfaf41651cbf0905f806d074b025dc60e908fd1562896da5e (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,446 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.4-py3-none-any.whl#sha256=8fb6924808b71bdc89472e84af147a439817e0a3a42d6c8ebbb24ab24d5aed48 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,447 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.3-py3-none-any.whl#sha256=3ca03677ec61152b0d2633cdaf790e7d1f0ad26fe98b3e941801c0fb4f764543 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:57:15,447 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.1-py3-none-any.whl#sha256=6906d32c055f62c2001f7821cd213d2dea1d429b436a820f794718def3ffc302 (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-09T22:57:15,448 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.0-py3-none-any.whl#sha256=b026a4bfbdb9619aa35b321f689be75094c1772ae9843728423ab7b58df7c6da (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-09T22:57:15,449 Skipping link: not a file: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:57:15,449 Skipping link: not a file: https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:57:15,469 Given no hashes to check 1 links for project 'protein-design-tools': discarding no candidates 2024-05-09T22:57:15,487 Collecting protein-design-tools==0.1.12 2024-05-09T22:57:15,490 Created temporary directory: /tmp/pip-unpack-la4y_5rk 2024-05-09T22:57:15,705 Downloading protein_design_tools-0.1.12.tar.gz (7.0 kB) 2024-05-09T22:57:15,741 Added protein-design-tools==0.1.12 from https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz to build tracker '/tmp/pip-build-tracker-qp590_2m' 2024-05-09T22:57:15,743 Running setup.py (path:/tmp/pip-wheel-loj8xugz/protein-design-tools_4f06858852ef4995bd96f0016d846bf3/setup.py) egg_info for package protein-design-tools 2024-05-09T22:57:15,744 Created temporary directory: /tmp/pip-pip-egg-info-sadv34ii 2024-05-09T22:57:15,745 Preparing metadata (setup.py): started 2024-05-09T22:57:15,746 Running command python setup.py egg_info 2024-05-09T22:57:16,842 running egg_info 2024-05-09T22:57:16,843 creating /tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info 2024-05-09T22:57:16,868 writing /tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/PKG-INFO 2024-05-09T22:57:16,871 writing dependency_links to /tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/dependency_links.txt 2024-05-09T22:57:16,873 writing requirements to /tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/requires.txt 2024-05-09T22:57:16,874 writing top-level names to /tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/top_level.txt 2024-05-09T22:57:16,875 writing manifest file '/tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:57:16,956 reading manifest file '/tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:57:16,958 adding license file 'LICENSE' 2024-05-09T22:57:16,960 writing manifest file '/tmp/pip-pip-egg-info-sadv34ii/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:57:17,077 Preparing metadata (setup.py): finished with status 'done' 2024-05-09T22:57:17,081 Source in /tmp/pip-wheel-loj8xugz/protein-design-tools_4f06858852ef4995bd96f0016d846bf3 has version 0.1.12, which satisfies requirement protein-design-tools==0.1.12 from https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz 2024-05-09T22:57:17,082 Removed protein-design-tools==0.1.12 from https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz from build tracker '/tmp/pip-build-tracker-qp590_2m' 2024-05-09T22:57:17,088 Created temporary directory: /tmp/pip-unpack-tbuh7txl 2024-05-09T22:57:17,089 Created temporary directory: /tmp/pip-unpack-tdg3j0at 2024-05-09T22:57:17,093 Building wheels for collected packages: protein-design-tools 2024-05-09T22:57:17,098 Created temporary directory: /tmp/pip-wheel-85g8ho5d 2024-05-09T22:57:17,099 Building wheel for protein-design-tools (setup.py): started 2024-05-09T22:57:17,100 Destination directory: /tmp/pip-wheel-85g8ho5d 2024-05-09T22:57:17,101 Running command python setup.py bdist_wheel 2024-05-09T22:57:18,159 running bdist_wheel 2024-05-09T22:57:18,254 running build 2024-05-09T22:57:18,254 running build_py 2024-05-09T22:57:18,281 creating build 2024-05-09T22:57:18,282 creating build/lib 2024-05-09T22:57:18,282 creating build/lib/protein_design_tools 2024-05-09T22:57:18,283 copying protein_design_tools/protein_structure.py -> build/lib/protein_design_tools 2024-05-09T22:57:18,286 copying protein_design_tools/protein_structure_utils.py -> build/lib/protein_design_tools 2024-05-09T22:57:18,288 copying protein_design_tools/__init__.py -> build/lib/protein_design_tools 2024-05-09T22:57:18,289 copying protein_design_tools/test.py -> build/lib/protein_design_tools 2024-05-09T22:57:18,317 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-09T22:57:18,318 !! 2024-05-09T22:57:18,319 ******************************************************************************** 2024-05-09T22:57:18,319 Please avoid running ``setup.py`` directly. 2024-05-09T22:57:18,320 Instead, use pypa/build, pypa/installer or other 2024-05-09T22:57:18,321 standards-based tools. 2024-05-09T22:57:18,322 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-09T22:57:18,322 ******************************************************************************** 2024-05-09T22:57:18,323 !! 2024-05-09T22:57:18,324 self.initialize_options() 2024-05-09T22:57:18,343 installing to build/bdist.linux-armv7l/wheel 2024-05-09T22:57:18,343 running install 2024-05-09T22:57:18,368 running install_lib 2024-05-09T22:57:18,392 creating build/bdist.linux-armv7l 2024-05-09T22:57:18,393 creating build/bdist.linux-armv7l/wheel 2024-05-09T22:57:18,394 creating build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:57:18,395 copying build/lib/protein_design_tools/protein_structure.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:57:18,398 copying build/lib/protein_design_tools/protein_structure_utils.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:57:18,400 copying build/lib/protein_design_tools/__init__.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:57:18,402 copying build/lib/protein_design_tools/test.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:57:18,403 running install_egg_info 2024-05-09T22:57:18,467 running egg_info 2024-05-09T22:57:18,491 writing protein_design_tools.egg-info/PKG-INFO 2024-05-09T22:57:18,494 writing dependency_links to protein_design_tools.egg-info/dependency_links.txt 2024-05-09T22:57:18,496 writing requirements to protein_design_tools.egg-info/requires.txt 2024-05-09T22:57:18,497 writing top-level names to protein_design_tools.egg-info/top_level.txt 2024-05-09T22:57:18,523 reading manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:57:18,525 adding license file 'LICENSE' 2024-05-09T22:57:18,527 writing manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:57:18,529 Copying protein_design_tools.egg-info to build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.12-py3.11.egg-info 2024-05-09T22:57:18,538 running install_scripts 2024-05-09T22:57:18,551 creating build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.12.dist-info/WHEEL 2024-05-09T22:57:18,553 creating '/tmp/pip-wheel-85g8ho5d/protein_design_tools-0.1.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-09T22:57:18,555 adding 'protein_design_tools/__init__.py' 2024-05-09T22:57:18,557 adding 'protein_design_tools/protein_structure.py' 2024-05-09T22:57:18,558 adding 'protein_design_tools/protein_structure_utils.py' 2024-05-09T22:57:18,560 adding 'protein_design_tools/test.py' 2024-05-09T22:57:18,562 adding 'protein_design_tools-0.1.12.dist-info/LICENSE' 2024-05-09T22:57:18,563 adding 'protein_design_tools-0.1.12.dist-info/METADATA' 2024-05-09T22:57:18,564 adding 'protein_design_tools-0.1.12.dist-info/WHEEL' 2024-05-09T22:57:18,565 adding 'protein_design_tools-0.1.12.dist-info/top_level.txt' 2024-05-09T22:57:18,566 adding 'protein_design_tools-0.1.12.dist-info/RECORD' 2024-05-09T22:57:18,567 removing build/bdist.linux-armv7l/wheel 2024-05-09T22:57:18,690 Building wheel for protein-design-tools (setup.py): finished with status 'done' 2024-05-09T22:57:18,693 Created wheel for protein-design-tools: filename=protein_design_tools-0.1.12-py3-none-any.whl size=7508 sha256=31708ffda844e5438199508fb1c157e275d8abf0ce62d7a067b0dbcf336ff34c 2024-05-09T22:57:18,695 Stored in directory: /tmp/pip-ephem-wheel-cache-27ku3l_q/wheels/63/a5/76/84ac04e8b4819b0878ecbf9945a785f775dc86cc10f92e2b52 2024-05-09T22:57:18,704 Successfully built protein-design-tools 2024-05-09T22:57:18,707 Removed build tracker: '/tmp/pip-build-tracker-qp590_2m'