2024-05-10T00:01:32,171 Created temporary directory: /tmp/pip-build-tracker-e5cv_0mp 2024-05-10T00:01:32,172 Initialized build tracking at /tmp/pip-build-tracker-e5cv_0mp 2024-05-10T00:01:32,173 Created build tracker: /tmp/pip-build-tracker-e5cv_0mp 2024-05-10T00:01:32,173 Entered build tracker: /tmp/pip-build-tracker-e5cv_0mp 2024-05-10T00:01:32,174 Created temporary directory: /tmp/pip-wheel-e5psdhgn 2024-05-10T00:01:32,178 Created temporary directory: /tmp/pip-ephem-wheel-cache-33ik0yj5 2024-05-10T00:01:32,203 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-10T00:01:32,206 2 location(s) to search for versions of protein-design-tools: 2024-05-10T00:01:32,206 * https://pypi.org/simple/protein-design-tools/ 2024-05-10T00:01:32,206 * https://www.piwheels.org/simple/protein-design-tools/ 2024-05-10T00:01:32,207 Fetching project page and analyzing links: https://pypi.org/simple/protein-design-tools/ 2024-05-10T00:01:32,208 Getting page https://pypi.org/simple/protein-design-tools/ 2024-05-10T00:01:32,210 Found index url https://pypi.org/simple/ 2024-05-10T00:01:32,356 Fetched page https://pypi.org/simple/protein-design-tools/ as application/vnd.pypi.simple.v1+json 2024-05-10T00:01:32,360 Found link https://files.pythonhosted.org/packages/ed/a6/a527cb82986e54d8bf9c1f1de71036e3474c6fde773c40dbdcd2e857793e/protein-design-tools-0.1.0.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.0 2024-05-10T00:01:32,361 Found link https://files.pythonhosted.org/packages/99/f2/9710ed6b56c764ed7ecb1035655952234d65fef841aa220f727e7dc58c58/protein_design_tools-0.1.1.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.1 2024-05-10T00:01:32,362 Found link https://files.pythonhosted.org/packages/b2/8e/8559cd3b6f8454390d45afb9015819cdb01aa51ed9b53b64b044b9342bb2/protein_design_tools-0.1.3.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.3 2024-05-10T00:01:32,363 Found link https://files.pythonhosted.org/packages/05/90/17c62aa7320a475051eea3f857d854065f49e1c6e241816662de784d4495/protein_design_tools-0.1.4.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.4 2024-05-10T00:01:32,364 Found link https://files.pythonhosted.org/packages/2b/4f/e576ff4b0c17f92a752670ae249b18c4b22681d162b3ea54eb7c8187e934/protein-design-tools-0.1.5.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.5 2024-05-10T00:01:32,365 Found link https://files.pythonhosted.org/packages/2e/43/6bbc489853ecce726a00644099615c17b574b2fe318c53409f7071eb1829/protein_design_tools-0.1.6.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.6 2024-05-10T00:01:32,365 Found link https://files.pythonhosted.org/packages/6c/af/d4f52f5271c5185dcb0683fdea82ccd34534111b732c96913ee6cee20ba2/protein_design_tools-0.1.7.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.7 2024-05-10T00:01:32,366 Found link https://files.pythonhosted.org/packages/14/24/a1d06b818f3d46d7318b86f0334181bb8b9134f71856b2a0ca69ea24d040/protein_design_tools-0.1.8.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.8 2024-05-10T00:01:32,367 Found link https://files.pythonhosted.org/packages/9c/73/da486d6ea5db2b79ee4188d258d6b13734e412cf0c16cc9d40d09900699d/protein_design_tools-0.1.9.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.9 2024-05-10T00:01:32,368 Found link https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.10 2024-05-10T00:01:32,369 Found link https://files.pythonhosted.org/packages/be/d1/7552b3dafe349a6c0b89507eaf0b75338f5fa977b281f546bb30649942b7/protein_design_tools-0.1.11.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.11 2024-05-10T00:01:32,370 Found link https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.12 2024-05-10T00:01:32,371 Found link https://files.pythonhosted.org/packages/66/a4/9a64125c3f518d628b870adc8c9fb9ab0e26e23a3eabc51a0c06594b915e/protein_design_tools-0.1.13.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.13 2024-05-10T00:01:32,372 Found link https://files.pythonhosted.org/packages/70/87/e061d696b801f8b4d00fe4611c89fecf786ec93a5ecb0ba89b7a90f906e7/protein_design_tools-0.1.14.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.14 2024-05-10T00:01:32,373 Found link https://files.pythonhosted.org/packages/d0/02/6860c3a27feea487138bc8fc1814e86f48d4ecd4ff13575d0664e0636516/protein_design_tools-0.1.15.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.15 2024-05-10T00:01:32,374 Found link https://files.pythonhosted.org/packages/aa/f8/5530cc31171d24490da206b3f7f8050246c7566871002b256f047fc5756b/protein_design_tools-0.1.16.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.16 2024-05-10T00:01:32,375 Found link https://files.pythonhosted.org/packages/f0/d2/f64c07141a7b5573eb0035be55de68ad06fff208c0aa95c0641ae5ef064e/protein_design_tools-0.1.17.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.17 2024-05-10T00:01:32,375 Found link https://files.pythonhosted.org/packages/ba/36/d107bb411a9106a299484fd078f0ade64e1388720cdc97a815f8895f3a15/protein_design_tools-0.1.18.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.18 2024-05-10T00:01:32,376 Fetching project page and analyzing links: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-10T00:01:32,377 Getting page https://www.piwheels.org/simple/protein-design-tools/ 2024-05-10T00:01:32,378 Found index url https://www.piwheels.org/simple/ 2024-05-10T00:01:32,905 Fetched page https://www.piwheels.org/simple/protein-design-tools/ as text/html 2024-05-10T00:01:32,917 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.14-py3-none-any.whl#sha256=e6e49ebfe5e8973506daa1894aa6e66a5e820a2382df6cf8aa6f47ca95afc838 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,918 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.13-py3-none-any.whl#sha256=30eb22fc29481255ef00f15076280a7bb8c481e154a09ee7fcc6784d2926404a (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,919 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.12-py3-none-any.whl#sha256=31708ffda844e5438199508fb1c157e275d8abf0ce62d7a067b0dbcf336ff34c (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,920 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.11-py3-none-any.whl#sha256=3c7c4f05ad2996e49f7f0832d581ec72b0517cd4e0f986e845108c0a6e58acb8 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,921 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.10-py3-none-any.whl#sha256=d7e2a99fe064326d2b4c1fcc6ee98dc054b35d1ceccb8fe8665a0310c2d5dde3 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,922 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.9-py3-none-any.whl#sha256=5acbaf40f239e41b61fb581d11ea8a230ca5197b170159850bc93cd3403976f6 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,923 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.8-py3-none-any.whl#sha256=f1747869a6004c8e1f0fb378cf55ab0df7c666a0a419414de8b98d92cacb2132 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,925 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.7-py3-none-any.whl#sha256=0e32edd830836de2ef77b03f2375ddd185dabc9fec3b9b9983f05b4f4d545a26 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,926 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.6-py3-none-any.whl#sha256=b7597266a06dd8c3544dd12e69d278db111719d068166100b2fde95e5438a85d (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,927 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.5-py3-none-any.whl#sha256=d39131f1daa2a71dfaf41651cbf0905f806d074b025dc60e908fd1562896da5e (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,927 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.4-py3-none-any.whl#sha256=8fb6924808b71bdc89472e84af147a439817e0a3a42d6c8ebbb24ab24d5aed48 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,928 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.3-py3-none-any.whl#sha256=3ca03677ec61152b0d2633cdaf790e7d1f0ad26fe98b3e941801c0fb4f764543 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-10T00:01:32,929 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.1-py3-none-any.whl#sha256=6906d32c055f62c2001f7821cd213d2dea1d429b436a820f794718def3ffc302 (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-10T00:01:32,930 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.0-py3-none-any.whl#sha256=b026a4bfbdb9619aa35b321f689be75094c1772ae9843728423ab7b58df7c6da (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-10T00:01:32,931 Skipping link: not a file: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-10T00:01:32,932 Skipping link: not a file: https://pypi.org/simple/protein-design-tools/ 2024-05-10T00:01:32,970 Given no hashes to check 1 links for project 'protein-design-tools': discarding no candidates 2024-05-10T00:01:32,988 Collecting protein-design-tools==0.1.16 2024-05-10T00:01:32,990 Created temporary directory: /tmp/pip-unpack-uuao4nxp 2024-05-10T00:01:33,201 Downloading protein_design_tools-0.1.16.tar.gz (7.0 kB) 2024-05-10T00:01:33,235 Added protein-design-tools==0.1.16 from https://files.pythonhosted.org/packages/aa/f8/5530cc31171d24490da206b3f7f8050246c7566871002b256f047fc5756b/protein_design_tools-0.1.16.tar.gz to build tracker '/tmp/pip-build-tracker-e5cv_0mp' 2024-05-10T00:01:33,238 Running setup.py (path:/tmp/pip-wheel-e5psdhgn/protein-design-tools_4acff61607ea41de8821ea6dd70ca7cc/setup.py) egg_info for package protein-design-tools 2024-05-10T00:01:33,239 Created temporary directory: /tmp/pip-pip-egg-info-hc_yvqh0 2024-05-10T00:01:33,239 Preparing metadata (setup.py): started 2024-05-10T00:01:33,241 Running command python setup.py egg_info 2024-05-10T00:01:34,339 running egg_info 2024-05-10T00:01:34,340 creating /tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info 2024-05-10T00:01:34,365 writing /tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/PKG-INFO 2024-05-10T00:01:34,368 writing dependency_links to /tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/dependency_links.txt 2024-05-10T00:01:34,370 writing requirements to /tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/requires.txt 2024-05-10T00:01:34,371 writing top-level names to /tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/top_level.txt 2024-05-10T00:01:34,372 writing manifest file '/tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/SOURCES.txt' 2024-05-10T00:01:36,461 reading manifest file '/tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/SOURCES.txt' 2024-05-10T00:01:37,308 adding license file 'LICENSE' 2024-05-10T00:01:37,314 writing manifest file '/tmp/pip-pip-egg-info-hc_yvqh0/protein_design_tools.egg-info/SOURCES.txt' 2024-05-10T00:01:37,479 Preparing metadata (setup.py): finished with status 'done' 2024-05-10T00:01:37,484 Source in /tmp/pip-wheel-e5psdhgn/protein-design-tools_4acff61607ea41de8821ea6dd70ca7cc has version 0.1.16, which satisfies requirement protein-design-tools==0.1.16 from https://files.pythonhosted.org/packages/aa/f8/5530cc31171d24490da206b3f7f8050246c7566871002b256f047fc5756b/protein_design_tools-0.1.16.tar.gz 2024-05-10T00:01:37,486 Removed protein-design-tools==0.1.16 from https://files.pythonhosted.org/packages/aa/f8/5530cc31171d24490da206b3f7f8050246c7566871002b256f047fc5756b/protein_design_tools-0.1.16.tar.gz from build tracker '/tmp/pip-build-tracker-e5cv_0mp' 2024-05-10T00:01:37,492 Created temporary directory: /tmp/pip-unpack-8a0qesbr 2024-05-10T00:01:37,493 Created temporary directory: /tmp/pip-unpack-rlz5zk1x 2024-05-10T00:01:37,498 Building wheels for collected packages: protein-design-tools 2024-05-10T00:01:37,505 Created temporary directory: /tmp/pip-wheel-dkgvmvb8 2024-05-10T00:01:37,506 Building wheel for protein-design-tools (setup.py): started 2024-05-10T00:01:37,507 Destination directory: /tmp/pip-wheel-dkgvmvb8 2024-05-10T00:01:37,508 Running command python setup.py bdist_wheel 2024-05-10T00:01:38,946 running bdist_wheel 2024-05-10T00:01:40,224 running build 2024-05-10T00:01:40,225 running build_py 2024-05-10T00:01:40,282 creating build 2024-05-10T00:01:40,282 creating build/lib 2024-05-10T00:01:40,284 creating build/lib/protein_design_tools 2024-05-10T00:01:40,286 copying protein_design_tools/protein_structure.py -> build/lib/protein_design_tools 2024-05-10T00:01:40,290 copying protein_design_tools/protein_structure_utils.py -> build/lib/protein_design_tools 2024-05-10T00:01:40,293 copying protein_design_tools/test.py -> build/lib/protein_design_tools 2024-05-10T00:01:40,296 copying protein_design_tools/__init__.py -> build/lib/protein_design_tools 2024-05-10T00:01:40,339 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-10T00:01:40,340 !! 2024-05-10T00:01:40,341 ******************************************************************************** 2024-05-10T00:01:40,342 Please avoid running ``setup.py`` directly. 2024-05-10T00:01:40,346 Instead, use pypa/build, pypa/installer or other 2024-05-10T00:01:40,346 standards-based tools. 2024-05-10T00:01:40,348 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-10T00:01:40,350 ******************************************************************************** 2024-05-10T00:01:40,352 !! 2024-05-10T00:01:40,353 self.initialize_options() 2024-05-10T00:01:40,374 installing to build/bdist.linux-armv7l/wheel 2024-05-10T00:01:40,374 running install 2024-05-10T00:01:40,398 running install_lib 2024-05-10T00:01:40,432 creating build/bdist.linux-armv7l 2024-05-10T00:01:40,433 creating build/bdist.linux-armv7l/wheel 2024-05-10T00:01:40,438 creating build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-10T00:01:40,443 copying build/lib/protein_design_tools/protein_structure.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-10T00:01:40,450 copying build/lib/protein_design_tools/protein_structure_utils.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-10T00:01:40,454 copying build/lib/protein_design_tools/test.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-10T00:01:40,460 copying build/lib/protein_design_tools/__init__.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-10T00:01:40,462 running install_egg_info 2024-05-10T00:01:40,558 running egg_info 2024-05-10T00:01:40,590 writing protein_design_tools.egg-info/PKG-INFO 2024-05-10T00:01:40,598 writing dependency_links to protein_design_tools.egg-info/dependency_links.txt 2024-05-10T00:01:40,600 writing requirements to protein_design_tools.egg-info/requires.txt 2024-05-10T00:01:40,601 writing top-level names to protein_design_tools.egg-info/top_level.txt 2024-05-10T00:01:40,637 reading manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-10T00:01:40,640 adding license file 'LICENSE' 2024-05-10T00:01:40,642 writing manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-10T00:01:40,645 Copying protein_design_tools.egg-info to build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.16-py3.11.egg-info 2024-05-10T00:01:40,659 running install_scripts 2024-05-10T00:01:40,680 creating build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.16.dist-info/WHEEL 2024-05-10T00:01:40,683 creating '/tmp/pip-wheel-dkgvmvb8/protein_design_tools-0.1.16-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-10T00:01:40,689 adding 'protein_design_tools/__init__.py' 2024-05-10T00:01:40,691 adding 'protein_design_tools/protein_structure.py' 2024-05-10T00:01:40,693 adding 'protein_design_tools/protein_structure_utils.py' 2024-05-10T00:01:40,694 adding 'protein_design_tools/test.py' 2024-05-10T00:01:40,697 adding 'protein_design_tools-0.1.16.dist-info/LICENSE' 2024-05-10T00:01:40,699 adding 'protein_design_tools-0.1.16.dist-info/METADATA' 2024-05-10T00:01:40,700 adding 'protein_design_tools-0.1.16.dist-info/WHEEL' 2024-05-10T00:01:40,701 adding 'protein_design_tools-0.1.16.dist-info/top_level.txt' 2024-05-10T00:01:40,702 adding 'protein_design_tools-0.1.16.dist-info/RECORD' 2024-05-10T00:01:40,703 removing build/bdist.linux-armv7l/wheel 2024-05-10T00:01:40,830 Building wheel for protein-design-tools (setup.py): finished with status 'done' 2024-05-10T00:01:40,833 Created wheel for protein-design-tools: filename=protein_design_tools-0.1.16-py3-none-any.whl size=7369 sha256=046d1cf8f56bb327c002b39c390164efea85d617e3cdc28b7b83e1e1208031a6 2024-05-10T00:01:40,835 Stored in directory: /tmp/pip-ephem-wheel-cache-33ik0yj5/wheels/e8/5b/c7/4bab0568640e53c534aff845c588d4bbfc8807dddd16f34b94 2024-05-10T00:01:40,846 Successfully built protein-design-tools 2024-05-10T00:01:40,849 Removed build tracker: '/tmp/pip-build-tracker-e5cv_0mp'