2024-05-10T10:49:33,623 Created temporary directory: /tmp/pip-build-tracker-1qvov2ls
2024-05-10T10:49:33,624 Initialized build tracking at /tmp/pip-build-tracker-1qvov2ls
2024-05-10T10:49:33,625 Created build tracker: /tmp/pip-build-tracker-1qvov2ls
2024-05-10T10:49:33,625 Entered build tracker: /tmp/pip-build-tracker-1qvov2ls
2024-05-10T10:49:33,626 Created temporary directory: /tmp/pip-wheel-r13y5qzj
2024-05-10T10:49:33,629 Created temporary directory: /tmp/pip-ephem-wheel-cache-ml65mrms
2024-05-10T10:49:33,651 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-10T10:49:33,654 2 location(s) to search for versions of stcat:
2024-05-10T10:49:33,654 * https://pypi.org/simple/stcat/
2024-05-10T10:49:33,654 * https://www.piwheels.org/simple/stcat/
2024-05-10T10:49:33,655 Fetching project page and analyzing links: https://pypi.org/simple/stcat/
2024-05-10T10:49:33,656 Getting page https://pypi.org/simple/stcat/
2024-05-10T10:49:33,657 Found index url https://pypi.org/simple/
2024-05-10T10:49:33,876 Fetched page https://pypi.org/simple/stcat/ as application/vnd.pypi.simple.v1+json
2024-05-10T10:49:33,879   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/dd/d9/7509763cc9a3235091c79b0b4a3a9a415f7b643a68593550ab533d06677d/STCAT-0.2-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,880   Found link https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.2
2024-05-10T10:49:33,881   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/a1/c2/622b9f058b24687ff867af676fe1a228e5ce888299d80fb946f23947d90b/STCAT-0.3-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,881   Found link https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3
2024-05-10T10:49:33,882   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/00/9f/c43fc909bbaa04cc23ab22dce4347ba97041c75509b1ad05cb32208af304/STCAT-0.3.1-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,883   Found link https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3.1
2024-05-10T10:49:33,884   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/82/30/81637812215bbf231cfcde640e3e9b6d9c2f03ca047ee35e4da2f00451ef/STCAT-0.4-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,885   Found link https://files.pythonhosted.org/packages/b1/2c/d5c45eed6a58face4a30c3d86a73f9ecf36428a3c1dba4e8261ee8b49491/STCAT-0.4.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.4
2024-05-10T10:49:33,886   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/c0/e2/4eb4ba85784764e9f06ff3e3ea3984483797409d9dbb78bac2bc72aefcda/STCAT-0.5-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,887   Found link https://files.pythonhosted.org/packages/63/4b/4c69ba9d101bddf6c744e6b95d7dd1baf70bfdca8f35d5d3d699286c9818/STCAT-0.5.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.5
2024-05-10T10:49:33,887   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/e7/b2/b1b8e75f6dcec052813774bb57b7acb1a6c936c7d63fcb679479a18316be/STCAT-0.6-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:33,888   Found link https://files.pythonhosted.org/packages/7d/7b/87a75714b463c728a46c3327292c2d1d015c9d5bf420211e3ecffd2181fd/STCAT-0.6.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.6
2024-05-10T10:49:33,889 Fetching project page and analyzing links: https://www.piwheels.org/simple/stcat/
2024-05-10T10:49:33,890 Getting page https://www.piwheels.org/simple/stcat/
2024-05-10T10:49:33,891 Found index url https://www.piwheels.org/simple/
2024-05-10T10:49:34,053 Fetched page https://www.piwheels.org/simple/stcat/ as text/html
2024-05-10T10:49:34,055   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.5-py3-none-any.whl#sha256=129d56f002bc386b4039e47de1ecdf4ec194e05e74b03e72f35c4fbbf6003229 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:34,056   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.4-py3-none-any.whl#sha256=1fc9535179dab13c6c61b1b6e2fcd1bd257776472eb6c91d94140ae9d3194adb (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:34,056   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.3.1-py3-none-any.whl#sha256=9222fb8e2c8a9b3ced6fcf927634943d0a8ff963cf28ca70f0f85907bb76dcf2 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:34,057   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.3-py3-none-any.whl#sha256=09afd386b49d2f718b124e55b00afc7b12430010014558c7d7df34f006324d19 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:34,057   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.2-py3-none-any.whl#sha256=faf26d207bd572f5fad92b52dcd16f0d45056fa51631366657ba80adc9e9f1ff (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-10T10:49:34,058 Skipping link: not a file: https://www.piwheels.org/simple/stcat/
2024-05-10T10:49:34,058 Skipping link: not a file: https://pypi.org/simple/stcat/
2024-05-10T10:49:34,077 Given no hashes to check 1 links for project 'stcat': discarding no candidates
2024-05-10T10:49:34,095 Collecting stcat==0.6
2024-05-10T10:49:34,098   Created temporary directory: /tmp/pip-unpack-qspq8q63
2024-05-10T10:49:34,312   Downloading STCAT-0.6.tar.gz (1.7 MB)
2024-05-10T10:49:34,690   Added stcat==0.6 from https://files.pythonhosted.org/packages/7d/7b/87a75714b463c728a46c3327292c2d1d015c9d5bf420211e3ecffd2181fd/STCAT-0.6.tar.gz to build tracker '/tmp/pip-build-tracker-1qvov2ls'
2024-05-10T10:49:34,691   Running setup.py (path:/tmp/pip-wheel-r13y5qzj/stcat_afbb66553fb54bbc8ce497f00eff5e62/setup.py) egg_info for package stcat
2024-05-10T10:49:34,692   Created temporary directory: /tmp/pip-pip-egg-info-68u8zj_z
2024-05-10T10:49:34,693   Preparing metadata (setup.py): started
2024-05-10T10:49:34,695   Running command python setup.py egg_info
2024-05-10T10:49:35,780   running egg_info
2024-05-10T10:49:35,782   creating /tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info
2024-05-10T10:49:35,806   writing /tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/PKG-INFO
2024-05-10T10:49:35,810   writing dependency_links to /tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/dependency_links.txt
2024-05-10T10:49:35,812   writing requirements to /tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/requires.txt
2024-05-10T10:49:35,813   writing top-level names to /tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/top_level.txt
2024-05-10T10:49:35,814   writing manifest file '/tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/SOURCES.txt'
2024-05-10T10:49:35,894   reading manifest file '/tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/SOURCES.txt'
2024-05-10T10:49:35,895   reading manifest template 'MANIFEST.in'
2024-05-10T10:49:35,900   writing manifest file '/tmp/pip-pip-egg-info-68u8zj_z/STCAT.egg-info/SOURCES.txt'
2024-05-10T10:49:36,018   Preparing metadata (setup.py): finished with status 'done'
2024-05-10T10:49:36,022   Source in /tmp/pip-wheel-r13y5qzj/stcat_afbb66553fb54bbc8ce497f00eff5e62 has version 0.6, which satisfies requirement stcat==0.6 from https://files.pythonhosted.org/packages/7d/7b/87a75714b463c728a46c3327292c2d1d015c9d5bf420211e3ecffd2181fd/STCAT-0.6.tar.gz
2024-05-10T10:49:36,023   Removed stcat==0.6 from https://files.pythonhosted.org/packages/7d/7b/87a75714b463c728a46c3327292c2d1d015c9d5bf420211e3ecffd2181fd/STCAT-0.6.tar.gz from build tracker '/tmp/pip-build-tracker-1qvov2ls'
2024-05-10T10:49:36,029 Created temporary directory: /tmp/pip-unpack-4aema4jv
2024-05-10T10:49:36,030 Created temporary directory: /tmp/pip-unpack-cj67n0_x
2024-05-10T10:49:36,041 Building wheels for collected packages: stcat
2024-05-10T10:49:36,045   Created temporary directory: /tmp/pip-wheel-kok98aud
2024-05-10T10:49:36,045   Building wheel for stcat (setup.py): started
2024-05-10T10:49:36,046   Destination directory: /tmp/pip-wheel-kok98aud
2024-05-10T10:49:36,047   Running command python setup.py bdist_wheel
2024-05-10T10:49:37,102   running bdist_wheel
2024-05-10T10:49:37,198   running build
2024-05-10T10:49:37,199   running build_py
2024-05-10T10:49:37,226   creating build
2024-05-10T10:49:37,227   creating build/lib
2024-05-10T10:49:37,227   creating build/lib/STCAT
2024-05-10T10:49:37,228   copying STCAT/logger.py -> build/lib/STCAT
2024-05-10T10:49:37,230   copying STCAT/__init__.py -> build/lib/STCAT
2024-05-10T10:49:37,232   copying STCAT/annotate.py -> build/lib/STCAT
2024-05-10T10:49:37,234   copying STCAT/STCAT.py -> build/lib/STCAT
2024-05-10T10:49:37,236   copying STCAT/models.py -> build/lib/STCAT
2024-05-10T10:49:37,239   copying STCAT/classifier.py -> build/lib/STCAT
2024-05-10T10:49:37,241   running egg_info
2024-05-10T10:49:37,299   writing STCAT.egg-info/PKG-INFO
2024-05-10T10:49:37,302   writing dependency_links to STCAT.egg-info/dependency_links.txt
2024-05-10T10:49:37,303   writing requirements to STCAT.egg-info/requires.txt
2024-05-10T10:49:37,304   writing top-level names to STCAT.egg-info/top_level.txt
2024-05-10T10:49:37,332   reading manifest file 'STCAT.egg-info/SOURCES.txt'
2024-05-10T10:49:37,334   reading manifest template 'MANIFEST.in'
2024-05-10T10:49:37,339   writing manifest file 'STCAT.egg-info/SOURCES.txt'
2024-05-10T10:49:37,341   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'STCAT.data' is absent from the `packages` configuration.
2024-05-10T10:49:37,342   !!

2024-05-10T10:49:37,343           ********************************************************************************
2024-05-10T10:49:37,344           ############################
2024-05-10T10:49:37,344           # Package would be ignored #
2024-05-10T10:49:37,345           ############################
2024-05-10T10:49:37,345           Python recognizes 'STCAT.data' as an importable package[^1],
2024-05-10T10:49:37,346           but it is absent from setuptools' `packages` configuration.

2024-05-10T10:49:37,347           This leads to an ambiguous overall configuration. If you want to distribute this
2024-05-10T10:49:37,348           package, please make sure that 'STCAT.data' is explicitly added
2024-05-10T10:49:37,348           to the `packages` configuration field.

2024-05-10T10:49:37,349           Alternatively, you can also rely on setuptools' discovery methods
2024-05-10T10:49:37,350           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-05-10T10:49:37,351           instead of `find_packages(...)`/`find:`).

2024-05-10T10:49:37,352           You can read more about "package discovery" on setuptools documentation page:

2024-05-10T10:49:37,362           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-05-10T10:49:37,363           If you don't want 'STCAT.data' to be distributed and are
2024-05-10T10:49:37,363           already explicitly excluding 'STCAT.data' via
2024-05-10T10:49:37,364           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-05-10T10:49:37,364           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-05-10T10:49:37,365           combination with a more fine grained `package-data` configuration.

2024-05-10T10:49:37,369           You can read more about "package data files" on setuptools documentation page:

2024-05-10T10:49:37,374           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-05-10T10:49:37,376           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-05-10T10:49:37,376                 even if it does not contain any `.py` files.
2024-05-10T10:49:37,379                 On the other hand, currently there is no concept of package data
2024-05-10T10:49:37,381                 directory, all directories are treated like packages.
2024-05-10T10:49:37,382           ********************************************************************************

2024-05-10T10:49:37,383   !!
2024-05-10T10:49:37,383     check.warn(importable)
2024-05-10T10:49:37,384   creating build/lib/STCAT/data
2024-05-10T10:49:37,384   copying STCAT/data/T_cell.pkl -> build/lib/STCAT/data
2024-05-10T10:49:37,385   copying STCAT/data/cd4.pkl -> build/lib/STCAT/data
2024-05-10T10:49:37,385   copying STCAT/data/cd8.pkl -> build/lib/STCAT/data
2024-05-10T10:49:37,386   copying STCAT/data/marker_CD4.txt -> build/lib/STCAT/data
2024-05-10T10:49:37,386   copying STCAT/data/marker_CD8.txt -> build/lib/STCAT/data
2024-05-10T10:49:37,414   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-05-10T10:49:37,415   !!

2024-05-10T10:49:37,417           ********************************************************************************
2024-05-10T10:49:37,417           Please avoid running ``setup.py`` directly.
2024-05-10T10:49:37,418           Instead, use pypa/build, pypa/installer or other
2024-05-10T10:49:37,419           standards-based tools.

2024-05-10T10:49:37,420           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-05-10T10:49:37,421           ********************************************************************************

2024-05-10T10:49:37,422   !!
2024-05-10T10:49:37,422     self.initialize_options()
2024-05-10T10:49:37,441   installing to build/bdist.linux-armv7l/wheel
2024-05-10T10:49:37,441   running install
2024-05-10T10:49:37,466   running install_lib
2024-05-10T10:49:37,490   creating build/bdist.linux-armv7l
2024-05-10T10:49:37,491   creating build/bdist.linux-armv7l/wheel
2024-05-10T10:49:37,492   creating build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,493   copying build/lib/STCAT/logger.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,495   copying build/lib/STCAT/__init__.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,497   copying build/lib/STCAT/annotate.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,499   creating build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,500   copying build/lib/STCAT/data/cd8.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,508   copying build/lib/STCAT/data/marker_CD4.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,510   copying build/lib/STCAT/data/marker_CD8.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,512   copying build/lib/STCAT/data/cd4.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,526   copying build/lib/STCAT/data/T_cell.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-10T10:49:37,543   copying build/lib/STCAT/STCAT.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,545   copying build/lib/STCAT/models.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,547   copying build/lib/STCAT/classifier.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-10T10:49:37,550   running install_egg_info
2024-05-10T10:49:37,581   Copying STCAT.egg-info to build/bdist.linux-armv7l/wheel/STCAT-0.6-py3.11.egg-info
2024-05-10T10:49:37,590   running install_scripts
2024-05-10T10:49:37,603   creating build/bdist.linux-armv7l/wheel/STCAT-0.6.dist-info/WHEEL
2024-05-10T10:49:37,606   creating '/tmp/pip-wheel-kok98aud/STCAT-0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-05-10T10:49:37,609   adding 'STCAT/STCAT.py'
2024-05-10T10:49:37,610   adding 'STCAT/__init__.py'
2024-05-10T10:49:37,612   adding 'STCAT/annotate.py'
2024-05-10T10:49:37,615   adding 'STCAT/classifier.py'
2024-05-10T10:49:37,616   adding 'STCAT/logger.py'
2024-05-10T10:49:37,618   adding 'STCAT/models.py'
2024-05-10T10:49:37,768   adding 'STCAT/data/T_cell.pkl'
2024-05-10T10:49:37,855   adding 'STCAT/data/cd4.pkl'
2024-05-10T10:49:37,899   adding 'STCAT/data/cd8.pkl'
2024-05-10T10:49:37,902   adding 'STCAT/data/marker_CD4.txt'
2024-05-10T10:49:37,904   adding 'STCAT/data/marker_CD8.txt'
2024-05-10T10:49:37,906   adding 'STCAT-0.6.dist-info/METADATA'
2024-05-10T10:49:37,907   adding 'STCAT-0.6.dist-info/WHEEL'
2024-05-10T10:49:37,907   adding 'STCAT-0.6.dist-info/top_level.txt'
2024-05-10T10:49:37,908   adding 'STCAT-0.6.dist-info/RECORD'
2024-05-10T10:49:37,930   removing build/bdist.linux-armv7l/wheel
2024-05-10T10:49:38,056   Building wheel for stcat (setup.py): finished with status 'done'
2024-05-10T10:49:38,075   Created wheel for stcat: filename=STCAT-0.6-py3-none-any.whl size=1710007 sha256=6e886c594327fbcd34c1bb9fba6c23b3712cd50b3fbb795ee9d19a785074eb05
2024-05-10T10:49:38,076   Stored in directory: /tmp/pip-ephem-wheel-cache-ml65mrms/wheels/18/4e/0e/4324bd476d06c879e6d8088a7a50d824e05dd885a55175986f
2024-05-10T10:49:38,086 Successfully built stcat
2024-05-10T10:49:38,137 Removed build tracker: '/tmp/pip-build-tracker-1qvov2ls'