2024-05-10T18:02:30,160 Created temporary directory: /tmp/pip-build-tracker-brl5jv0r 2024-05-10T18:02:30,162 Initialized build tracking at /tmp/pip-build-tracker-brl5jv0r 2024-05-10T18:02:30,162 Created build tracker: /tmp/pip-build-tracker-brl5jv0r 2024-05-10T18:02:30,162 Entered build tracker: /tmp/pip-build-tracker-brl5jv0r 2024-05-10T18:02:30,163 Created temporary directory: /tmp/pip-wheel-2x55pvc2 2024-05-10T18:02:30,167 Created temporary directory: /tmp/pip-ephem-wheel-cache-krxsnm8f 2024-05-10T18:02:30,191 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-10T18:02:30,195 2 location(s) to search for versions of scilpy: 2024-05-10T18:02:30,195 * https://pypi.org/simple/scilpy/ 2024-05-10T18:02:30,195 * https://www.piwheels.org/simple/scilpy/ 2024-05-10T18:02:30,195 Fetching project page and analyzing links: https://pypi.org/simple/scilpy/ 2024-05-10T18:02:30,196 Getting page https://pypi.org/simple/scilpy/ 2024-05-10T18:02:30,198 Found index url https://pypi.org/simple/ 2024-05-10T18:02:30,250 Fetched page https://pypi.org/simple/scilpy/ as application/vnd.pypi.simple.v1+json 2024-05-10T18:02:30,255 Found link https://files.pythonhosted.org/packages/fc/2a/50d559ef46fb2d42ab0f8fbf3da9b077d522cf242a284c950ba7508cf9d1/scilpy-0.2.dev0.tar.gz (from https://pypi.org/simple/scilpy/), version: 0.2.dev0 2024-05-10T18:02:30,255 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/68/5b/160b7def3cfb0a5de995bc878895c1c51384b06b02cbe195711e2c55b7aa/scilpy-1.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,255 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/63/09/cf207e968fed291956d4c2fe748764d02dc42e98e67479e4be3f4f3d3b55/scilpy-1.5.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,256 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/5f/60/3c9ba56a83a8ca1b73fe658c48c51c0023214ef7ab294b07baab96b03578/scilpy-1.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,256 Found link https://files.pythonhosted.org/packages/ed/c6/db658cf822392685ea33e78beebc2a98a4f4dc6f20795b830c5853e20a8f/scilpy-1.5.0.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11), version: 1.5.0 2024-05-10T18:02:30,257 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/85/35/af43f0811237291f7515e3aabfd3a0c27b0e3a2a6737b8c583196602a595/scilpy-1.5.post2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,257 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/06/a6/cb1fe978af8bb5ba6e197c84bb88a1954975872b2b0b08c186b263ff3756/scilpy-1.5.post2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,257 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/3a/86/62a9ad50dc407e1741089780533246771ffa72c8113368db26cbd33b0f1f/scilpy-1.5.post2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,258 Found link https://files.pythonhosted.org/packages/63/cf/cd6532740cb57b56ac4d71529341641e736557bead414e1d9b40c7130d6f/scilpy-1.5.post2.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11), version: 1.5.post2 2024-05-10T18:02:30,258 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/53/23/fe49f865e6c9dd7d435590787bcab9734129a2a45cf81dc54795de046251/scilpy-2.0.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,259 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/30/ae/c61db7f1a29b5d57a7448a9ab39503aceaf3286d2f5ff1d7191830317be1/scilpy-2.0.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,259 Found link https://files.pythonhosted.org/packages/63/d9/27a2c31fb8d56499a234ecefb67baf3f7ffd5f9954b9e63f8391173956af/scilpy-2.0.0.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9), version: 2.0.0 2024-05-10T18:02:30,259 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/7f/c7/b680a936862d04132a6cf6e7823368c2d414cb0cb870ec431f420d8f361c/scilpy-2.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,260 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/38/ce/d0d62b558eb83310ffa7531ba860b74bb90a1c1fe099c07107f74dcd8f33/scilpy-2.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,260 Found link https://files.pythonhosted.org/packages/11/f8/3a4d7f964350ba28d8f9f57bbea9509cc9d673323e1692e15cee5ea8f31e/scilpy-2.0.1.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9), version: 2.0.1 2024-05-10T18:02:30,261 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/25/c7/33032d68e1b67d161f4fd9efedd81d8a5c93171a6492124d021da7db4d8d/scilpy-2.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,261 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/c0/74/28a4c71337f6cd6cd2c285858aca505d2a20fea0372790bf008948b39c63/scilpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-05-10T18:02:30,261 Found link https://files.pythonhosted.org/packages/51/da/9a8d441589d77647203c3864f897d6c97b4a37f20b3de5f96dc8fe7b724d/scilpy-2.0.2.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9), version: 2.0.2 2024-05-10T18:02:30,262 Fetching project page and analyzing links: https://www.piwheels.org/simple/scilpy/ 2024-05-10T18:02:30,262 Getting page https://www.piwheels.org/simple/scilpy/ 2024-05-10T18:02:30,263 Found index url https://www.piwheels.org/simple/ 2024-05-10T18:02:30,448 Fetched page https://www.piwheels.org/simple/scilpy/ as text/html 2024-05-10T18:02:30,453 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=470bc903bed1d1844c0ff95453a6029e40de028b65227e343b200cec1a75e453 (from https://www.piwheels.org/simple/scilpy/) (requires-python:>=3.9,<3.11) 2024-05-10T18:02:30,453 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=470bc903bed1d1844c0ff95453a6029e40de028b65227e343b200cec1a75e453 (from https://www.piwheels.org/simple/scilpy/) (requires-python:>=3.9,<3.11) 2024-05-10T18:02:30,453 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=93daca21f00b9d93f3014b04fd463f5ab153990aaf078601f80d57bf047c2f3c (from https://www.piwheels.org/simple/scilpy/) (requires-python:>=3.9,<3.11) 2024-05-10T18:02:30,453 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=93daca21f00b9d93f3014b04fd463f5ab153990aaf078601f80d57bf047c2f3c (from https://www.piwheels.org/simple/scilpy/) (requires-python:>=3.9,<3.11) 2024-05-10T18:02:30,453 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.post2-cp39-cp39-linux_armv6l.whl#sha256=4c2fce848cd6aca1e6e175977de3a6669eea310d4848eab74f66a8ab69991acf (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,454 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.post2-cp39-cp39-linux_armv7l.whl#sha256=4c2fce848cd6aca1e6e175977de3a6669eea310d4848eab74f66a8ab69991acf (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,454 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=7673d2adc10be42497d2fba658bc2c0064063e30ad1aa08b464920732b79dccd (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,454 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=7673d2adc10be42497d2fba658bc2c0064063e30ad1aa08b464920732b79dccd (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-05-10T18:02:30,454 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp37-cp37m-linux_armv6l.whl#sha256=1fe2a44941abfb6397d0634d6699f74930df00a3b74154d5a3ec7c754ad6bcab (from https://www.piwheels.org/simple/scilpy/) 2024-05-10T18:02:30,454 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp37-cp37m-linux_armv7l.whl#sha256=1fe2a44941abfb6397d0634d6699f74930df00a3b74154d5a3ec7c754ad6bcab (from https://www.piwheels.org/simple/scilpy/) 2024-05-10T18:02:30,455 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp39-cp39-linux_armv6l.whl#sha256=4d60471b8bc262bab66213e2b42319310aa245a776f74de10d899520122d7320 (from https://www.piwheels.org/simple/scilpy/) 2024-05-10T18:02:30,455 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp39-cp39-linux_armv7l.whl#sha256=4d60471b8bc262bab66213e2b42319310aa245a776f74de10d899520122d7320 (from https://www.piwheels.org/simple/scilpy/) 2024-05-10T18:02:30,455 Skipping link: not a file: https://www.piwheels.org/simple/scilpy/ 2024-05-10T18:02:30,455 Skipping link: not a file: https://pypi.org/simple/scilpy/ 2024-05-10T18:02:30,473 Given no hashes to check 1 links for project 'scilpy': discarding no candidates 2024-05-10T18:02:30,490 Collecting scilpy==2.0.2 2024-05-10T18:02:30,492 Created temporary directory: /tmp/pip-unpack-fqa2j093 2024-05-10T18:02:30,621 Downloading scilpy-2.0.2.tar.gz (529 kB) 2024-05-10T18:02:31,927 Added scilpy==2.0.2 from https://files.pythonhosted.org/packages/51/da/9a8d441589d77647203c3864f897d6c97b4a37f20b3de5f96dc8fe7b724d/scilpy-2.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-brl5jv0r' 2024-05-10T18:02:31,929 Running setup.py (path:/tmp/pip-wheel-2x55pvc2/scilpy_3acf8b1d8d9e4f2eb3fbf718a606e547/setup.py) egg_info for package scilpy 2024-05-10T18:02:31,930 Created temporary directory: /tmp/pip-pip-egg-info-wj7eyjbc 2024-05-10T18:02:31,930 Preparing metadata (setup.py): started 2024-05-10T18:02:31,931 Running command python setup.py egg_info 2024-05-10T18:02:32,981 /usr/local/lib/python3.9/dist-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-05-10T18:02:32,982 !! 2024-05-10T18:02:32,982 ******************************************************************************** 2024-05-10T18:02:32,982 Requirements should be satisfied by a PEP 517 installer. 2024-05-10T18:02:32,982 If you are using pip, you can try `pip install --use-pep517`. 2024-05-10T18:02:32,983 ******************************************************************************** 2024-05-10T18:02:32,983 !! 2024-05-10T18:02:32,983 dist.fetch_build_eggs(dist.setup_requires) 2024-05-10T18:02:33,230 running egg_info 2024-05-10T18:02:33,232 creating /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info 2024-05-10T18:02:33,264 writing /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/PKG-INFO 2024-05-10T18:02:33,270 writing dependency_links to /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/dependency_links.txt 2024-05-10T18:02:33,287 writing entry points to /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/entry_points.txt 2024-05-10T18:02:33,291 writing requirements to /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/requires.txt 2024-05-10T18:02:33,292 writing top-level names to /tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/top_level.txt 2024-05-10T18:02:33,294 writing manifest file '/tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/SOURCES.txt' 2024-05-10T18:02:33,454 reading manifest file '/tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/SOURCES.txt' 2024-05-10T18:02:33,455 reading manifest template 'MANIFEST.in' 2024-05-10T18:02:33,505 warning: no files found matching '*.c' under directory 'scilpy' 2024-05-10T18:02:33,551 warning: no files found matching '*.cpp' under directory 'scilpy' 2024-05-10T18:02:33,595 adding license file 'LICENSE' 2024-05-10T18:02:33,618 writing manifest file '/tmp/pip-pip-egg-info-wj7eyjbc/scilpy.egg-info/SOURCES.txt' 2024-05-10T18:02:33,719 Preparing metadata (setup.py): finished with status 'done' 2024-05-10T18:02:33,725 Source in /tmp/pip-wheel-2x55pvc2/scilpy_3acf8b1d8d9e4f2eb3fbf718a606e547 has version 2.0.2, which satisfies requirement scilpy==2.0.2 from https://files.pythonhosted.org/packages/51/da/9a8d441589d77647203c3864f897d6c97b4a37f20b3de5f96dc8fe7b724d/scilpy-2.0.2.tar.gz 2024-05-10T18:02:33,725 Removed scilpy==2.0.2 from https://files.pythonhosted.org/packages/51/da/9a8d441589d77647203c3864f897d6c97b4a37f20b3de5f96dc8fe7b724d/scilpy-2.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-brl5jv0r' 2024-05-10T18:02:33,733 Created temporary directory: /tmp/pip-unpack-kjqy99xg 2024-05-10T18:02:33,734 Created temporary directory: /tmp/pip-unpack-fomnz733 2024-05-10T18:02:33,792 Building wheels for collected packages: scilpy 2024-05-10T18:02:33,796 Created temporary directory: /tmp/pip-wheel-abn_kmoa 2024-05-10T18:02:33,796 Building wheel for scilpy (setup.py): started 2024-05-10T18:02:33,797 Destination directory: /tmp/pip-wheel-abn_kmoa 2024-05-10T18:02:33,797 Running command python setup.py bdist_wheel 2024-05-10T18:02:34,730 /usr/local/lib/python3.9/dist-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-05-10T18:02:34,731 !! 2024-05-10T18:02:34,731 ******************************************************************************** 2024-05-10T18:02:34,731 Requirements should be satisfied by a PEP 517 installer. 2024-05-10T18:02:34,731 If you are using pip, you can try `pip install --use-pep517`. 2024-05-10T18:02:34,731 ******************************************************************************** 2024-05-10T18:02:34,731 !! 2024-05-10T18:02:34,732 dist.fetch_build_eggs(dist.setup_requires) 2024-05-10T18:02:34,967 running bdist_wheel 2024-05-10T18:02:35,065 running build 2024-05-10T18:02:35,065 running build_py 2024-05-10T18:02:35,100 creating build 2024-05-10T18:02:35,101 creating build/lib.linux-armv7l-cpython-39 2024-05-10T18:02:35,101 creating build/lib.linux-armv7l-cpython-39/scilpy 2024-05-10T18:02:35,102 copying scilpy/version.py -> build/lib.linux-armv7l-cpython-39/scilpy 2024-05-10T18:02:35,104 copying scilpy/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy 2024-05-10T18:02:35,112 creating build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,113 copying scripts/scil_tractogram_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,115 copying scripts/scil_bundle_generate_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,117 copying scripts/scil_connectivity_pairwise_agreement.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,118 copying scripts/scil_fodf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,120 copying scripts/scil_labels_combine.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,122 copying scripts/scil_frf_mean.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,124 copying scripts/scil_dwi_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,126 copying scripts/scil_sh_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,128 copying scripts/scil_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,130 copying scripts/scil_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,131 copying scripts/scil_bundle_shape_measures.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,134 copying scripts/scil_tractogram_segment_and_score.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,136 copying scripts/scil_frf_set_diffusivities.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,138 copying scripts/scil_viz_volume_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,139 copying scripts/scil_bundle_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,142 copying scripts/scil_sh_to_aodf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,143 copying scripts/scil_tracking_local.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,145 copying scripts/scil_btensor_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,148 copying scripts/scil_rgb_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,149 copying scripts/scil_tractogram_project_map_to_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,151 copying scripts/scil_gradients_generate_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,153 copying scripts/scil_volume_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,155 copying scripts/scil_tractogram_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,157 copying scripts/scil_aodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,159 copying scripts/scil_tractogram_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,161 copying scripts/scil_dwi_to_sh.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,162 copying scripts/scil_tractogram_segment_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,164 copying scripts/scil_tractogram_filter_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,166 copying scripts/scil_tractogram_shuffle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,168 copying scripts/scil_sh_to_sf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,170 copying scripts/scil_bundle_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,171 copying scripts/scil_dwi_convert_FDF.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,173 copying scripts/scil_plot_stats_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,175 copying scripts/scil_tractogram_detect_loops.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,177 copying scripts/scil_tractogram_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,179 copying scripts/scil_gradients_validate_correct_eddy.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,180 copying scripts/scil_dwi_detect_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,182 copying scripts/scil_tractogram_assign_custom_color.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,184 copying scripts/scil_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,186 copying scripts/scil_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,188 copying scripts/scil_volume_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,190 copying scripts/scil_tracking_local_dev.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,192 copying scripts/scil_connectivity_compare_populations.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,194 copying scripts/scil_tractogram_convert_hdf5_to_trk.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,196 copying scripts/scil_dwi_extract_shell.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,198 copying scripts/scil_viz_gradients_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,200 copying scripts/scil_bundle_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,202 copying scripts/scil_tractogram_resample_nb_points.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,204 copying scripts/scil_tractogram_assign_uniform_color.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,206 copying scripts/scil_json_merge_entries.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,208 copying scripts/scil_labels_dilate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,210 copying scripts/scil_dwi_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,212 copying scripts/scil_tractogram_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,214 copying scripts/scil_bundle_reject_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,216 copying scripts/scil_viz_volume_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,218 copying scripts/scil_frf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,220 copying scripts/scil_gradients_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,222 copying scripts/scil_tractogram_commit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,225 copying scripts/scil_mti_adjust_B1_header.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,227 copying scripts/scil_bundle_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,230 copying scripts/scil_header_validate_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,232 copying scripts/scil_volume_resample.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,234 copying scripts/scil_bundle_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,236 copying scripts/scil_header_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,238 copying scripts/scil_volume_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,240 copying scripts/scil_viz_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,242 copying scripts/scil_tractogram_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,245 copying scripts/scil_dti_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,247 copying scripts/scil_bundle_uniformize_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,250 copying scripts/scil_json_convert_entries_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,252 copying scripts/scil_viz_bundle_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,255 copying scripts/scil_tractogram_filter_by_anatomy.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,258 copying scripts/scil_tractogram_segment_bundles_for_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,261 copying scripts/scil_tractogram_compress.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,263 copying scripts/scil_denoising_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,265 copying scripts/scil_connectivity_normalize.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,267 copying scripts/scil_labels_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,269 copying scripts/scil_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,272 copying scripts/scil_connectivity_compute_matrices.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,275 copying scripts/scil_viz_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,278 copying scripts/scil_gradients_modify_axes.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,280 copying scripts/scil_dwi_concatenate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,282 copying scripts/scil_viz_bundle_screenshot_mni.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,285 copying scripts/scil_viz_dti_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,287 copying scripts/scil_json_harmonize_entries.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,289 copying scripts/scil_bundle_mean_fixel_bingham_metric.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,291 copying scripts/scil_tractogram_register.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,293 copying scripts/scil_tractogram_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,295 copying scripts/scil_frf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,298 copying scripts/scil_tracking_pft.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,300 copying scripts/scil_connectivity_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,302 copying scripts/scil_surface_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,304 copying scripts/scil_volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,306 copying scripts/scil_volume_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,308 copying scripts/scil_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,310 copying scripts/scil_dki_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,313 copying scripts/scil_dwi_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,315 copying scripts/scil_mti_maps_MT.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,318 copying scripts/scil_tractogram_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,320 copying scripts/scil_NODDI_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,322 copying scripts/scil_volume_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,324 copying scripts/scil_fodf_to_bingham.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,326 copying scripts/scil_tractogram_compute_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,328 copying scripts/scil_bundle_filter_by_occurence.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,331 copying scripts/scil_tractogram_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,333 copying scripts/scil_bids_validate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,336 copying scripts/scil_tractogram_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,338 copying scripts/scil_volume_crop.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,340 copying scripts/scil_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,342 copying scripts/scil_connectivity_print_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,344 copying scripts/scil_dwi_split_by_indices.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,346 copying scripts/scil_tractogram_split.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,349 copying scripts/scil_tracking_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,351 copying scripts/scil_freewater_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,353 copying scripts/scil_frf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,355 copying scripts/scil_tractogram_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,357 copying scripts/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,359 copying scripts/scil_lesions_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,361 copying scripts/scil_dwi_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,364 copying scripts/scil_bundle_mean_fixel_afd.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,367 copying scripts/scil_labels_split_volume_from_lut.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,369 copying scripts/scil_tractogram_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,371 copying scripts/scil_sh_fusion.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,373 copying scripts/scil_dwi_compute_snr.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,375 copying scripts/scil_dwi_apply_bias_field.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,377 copying scripts/scil_bundle_score_same_bundle_many_segmentations.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,379 copying scripts/scil_bundle_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,382 copying scripts/scil_tractogram_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,384 copying scripts/scil_bundle_score_many_bundles_one_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,387 copying scripts/scil_sh_to_rish.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,389 copying scripts/scil_connectivity_reorder_rois.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,391 copying scripts/scil_volume_stats_in_labels.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,393 copying scripts/scil_tractogram_compute_TODI.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,396 copying scripts/scil_viz_tractogram_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,398 copying scripts/scil_dwi_reorder_philips.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,400 copying scripts/scil_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,403 copying scripts/scil_viz_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,406 copying scripts/scil_tracking_pft_maps_edit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,408 copying scripts/scil_viz_volume_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,411 copying scripts/scil_volume_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,413 copying scripts/scil_gradients_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,415 copying scripts/scil_tractogram_remove_invalid.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,418 copying scripts/scil_connectivity_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,420 copying scripts/scil_search_keywords.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,422 copying scripts/scil_viz_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,425 copying scripts/scil_connectivity_filter.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,428 copying scripts/scil_viz_volume_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,430 copying scripts/scil_viz_tractogram_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,433 copying scripts/scil_tractogram_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,435 copying scripts/scil_bundle_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,437 copying scripts/scil_get_version.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,439 copying scripts/scil_volume_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,441 copying scripts/scil_tractogram_resample.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,444 copying scripts/scil_tractogram_dpp_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,447 copying scripts/scil_surface_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,448 copying scripts/scil_tractogram_segment_one_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,450 copying scripts/scil_mti_maps_ihMT.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,453 copying scripts/scil_surface_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,455 copying scripts/scil_bingham_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,457 copying scripts/scil_tractogram_fix_trk.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,460 copying scripts/scil_surface_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,462 copying scripts/scil_freewater_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,463 copying scripts/scil_tractogram_filter_by_roi.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,466 copying scripts/scil_fodf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,468 copying scripts/scil_labels_remove.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,470 copying scripts/scil_stats_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,472 copying scripts/scil_tractogram_filter_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,474 copying scripts/scil_gradients_validate_correct.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,476 copying scripts/scil_gradients_round_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,478 copying scripts/scil_connectivity_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,480 copying scripts/scil_fodf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-05-10T18:02:35,482 creating build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-05-10T18:02:35,483 copying scilpy/utils/metrics_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-05-10T18:02:35,486 copying scilpy/utils/spatial.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-05-10T18:02:35,488 copying scilpy/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-05-10T18:02:35,490 copying scilpy/utils/filenames.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-05-10T18:02:35,493 creating build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,494 copying scilpy/image/volume_math.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,496 copying scilpy/image/volume_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,499 copying scilpy/image/reslice.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,501 copying scilpy/image/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,504 copying scilpy/image/volume_space_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,506 copying scilpy/image/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,507 copying scilpy/image/volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,509 copying scilpy/image/labels.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-05-10T18:02:35,512 creating build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,513 copying scilpy/tracking/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,516 copying scilpy/tracking/seed.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,519 copying scilpy/tracking/propagator.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,522 copying scilpy/tracking/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,523 copying scilpy/tracking/tracker.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-05-10T18:02:35,527 creating build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-05-10T18:02:35,528 copying scilpy/stats/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-05-10T18:02:35,530 copying scilpy/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-05-10T18:02:35,531 copying scilpy/stats/stats.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-05-10T18:02:35,534 copying scilpy/stats/matrix_stats.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-05-10T18:02:35,536 creating build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-05-10T18:02:35,537 copying scilpy/gpuparallel/opencl_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-05-10T18:02:35,540 copying scilpy/gpuparallel/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-05-10T18:02:35,542 creating build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-05-10T18:02:35,543 copying scilpy/denoise/asym_filtering.py -> build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-05-10T18:02:35,546 copying scilpy/denoise/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-05-10T18:02:35,548 creating build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,549 copying scilpy/segment/recobundlesx.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,551 copying scilpy/segment/streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,554 copying scilpy/segment/models.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,556 copying scilpy/segment/voting_scheme.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,558 copying scilpy/segment/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,560 copying scilpy/segment/tractogram_from_roi.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-05-10T18:02:35,564 creating build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-05-10T18:02:35,564 copying scilpy/connectivity/connectivity_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-05-10T18:02:35,567 copying scilpy/connectivity/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-05-10T18:02:35,569 creating build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,570 copying scilpy/tractanalysis/distance_to_centroid.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,572 copying scilpy/tractanalysis/reproducibility_measures.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,575 copying scilpy/tractanalysis/scoring.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,578 copying scilpy/tractanalysis/afd_along_streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,580 copying scilpy/tractanalysis/bundle_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,583 copying scilpy/tractanalysis/tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,584 copying scilpy/tractanalysis/bingham_metric_along_streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,587 copying scilpy/tractanalysis/todi_util.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,589 copying scilpy/tractanalysis/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,590 copying scilpy/tractanalysis/json_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,593 copying scilpy/tractanalysis/todi.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:35,596 creating build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,597 copying scilpy/io/streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,600 copying scilpy/io/image.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,602 copying scilpy/io/varian_fdf.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,604 copying scilpy/io/hdf5.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,607 copying scilpy/io/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,610 copying scilpy/io/deprecator.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,611 copying scilpy/io/fetcher.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,614 copying scilpy/io/dvc.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,616 copying scilpy/io/mti.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,618 copying scilpy/io/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,619 copying scilpy/io/tensor.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,621 copying scilpy/io/btensor.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,623 copying scilpy/io/gradients.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-05-10T18:02:35,625 creating build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,626 copying scilpy/gradients/bvec_bval_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,628 copying scilpy/gradients/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,630 copying scilpy/gradients/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,631 copying scilpy/gradients/gen_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,634 copying scilpy/gradients/optimize_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-05-10T18:02:35,637 creating build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,637 copying scilpy/tractograms/lazy_tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,639 copying scilpy/tractograms/dps_and_dpp_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,642 copying scilpy/tractograms/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,643 copying scilpy/tractograms/tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,646 copying scilpy/tractograms/streamline_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,649 copying scilpy/tractograms/streamline_and_mask_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:35,652 creating build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-05-10T18:02:35,652 copying scilpy/preprocessing/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-05-10T18:02:35,654 copying scilpy/preprocessing/distortion_correction.py -> build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-05-10T18:02:35,657 creating build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,658 copying scilpy/viz/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,660 copying scilpy/viz/screenshot.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,662 copying scilpy/viz/color.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,665 copying scilpy/viz/slice.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,668 copying scilpy/viz/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,669 copying scilpy/viz/gradients.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-05-10T18:02:35,672 creating build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,673 copying scilpy/reconst/fiber_coherence.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,675 copying scilpy/reconst/fodf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,678 copying scilpy/reconst/aodf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,679 copying scilpy/reconst/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,682 copying scilpy/reconst/bingham.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,684 copying scilpy/reconst/sh.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,687 copying scilpy/reconst/mti.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,689 copying scilpy/reconst/divide.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,692 copying scilpy/reconst/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,694 copying scilpy/reconst/frf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-05-10T18:02:35,697 creating build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-05-10T18:02:35,698 copying scilpy/dwi/operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-05-10T18:02:35,700 copying scilpy/dwi/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-05-10T18:02:35,703 copying scilpy/dwi/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-05-10T18:02:35,705 creating build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-05-10T18:02:35,706 copying scilpy/image/tests/test_volume_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-05-10T18:02:35,708 copying scilpy/image/tests/test_volume_math.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-05-10T18:02:35,711 copying scilpy/image/tests/test_labels.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-05-10T18:02:35,713 copying scilpy/image/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-05-10T18:02:35,715 creating build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,716 copying scilpy/tractograms/tests/test_streamline_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,719 copying scilpy/tractograms/tests/test_streamline_and_mask_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,721 copying scilpy/tractograms/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,723 copying scilpy/tractograms/tests/test_tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,726 copying scilpy/tractograms/tests/test_dps_and_dpp_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-05-10T18:02:35,728 creating build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-05-10T18:02:35,730 copying scilpy/viz/backends/pil.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-05-10T18:02:35,733 copying scilpy/viz/backends/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-05-10T18:02:35,734 copying scilpy/viz/backends/fury.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-05-10T18:02:35,737 copying scilpy/viz/backends/vtk.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-05-10T18:02:35,739 creating build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-05-10T18:02:35,740 copying scilpy/viz/legacy/chord_chart.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-05-10T18:02:35,743 copying scilpy/viz/legacy/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-05-10T18:02:35,745 creating build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-05-10T18:02:35,746 copying scilpy/dwi/tests/test_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-05-10T18:02:35,748 copying scilpy/dwi/tests/test_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-05-10T18:02:35,750 copying scilpy/dwi/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-05-10T18:02:35,759 creating build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,760 copying scripts/tests/test_surface_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,762 copying scripts/tests/test_denoising_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,764 copying scripts/tests/test_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,766 copying scripts/tests/test_bundle_mean_fixel_afd.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,768 copying scripts/tests/test_gradients_generate_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,769 copying scripts/tests/test_labels_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,771 copying scripts/tests/test_dwi_to_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,773 copying scripts/tests/test_dti_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,775 copying scripts/tests/test_fodf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,777 copying scripts/tests/test_freewater_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,778 copying scripts/tests/test_tractogram_remove_invalid.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,780 copying scripts/tests/test_surface_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,782 copying scripts/tests/test_tractogram_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,784 copying scripts/tests/test_dwi_concatenate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,786 copying scripts/tests/test_tracking_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,788 copying scripts/tests/test_tractogram_register.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,790 copying scripts/tests/test_btensor_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,792 copying scripts/tests/test_viz_volume_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,794 copying scripts/tests/test_dwi_extract_shell.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,796 copying scripts/tests/test_freewater_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,798 copying scripts/tests/test_gradients_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,800 copying scripts/tests/test_tractogram_fix_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,801 copying scripts/tests/test_tractogram_compress.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,803 copying scripts/tests/test_rgb_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,805 copying scripts/tests/test_tractogram_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,807 copying scripts/tests/test_viz_volume_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,808 copying scripts/tests/test_tractogram_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,810 copying scripts/tests/test_dwi_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,812 copying scripts/tests/test_connectivity_normalize.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,814 copying scripts/tests/test_frf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,816 copying scripts/tests/test_volume_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,818 copying scripts/tests/test_labels_combine.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,820 copying scripts/tests/test_surface_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,821 copying scripts/tests/test_gradients_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,823 copying scripts/tests/test_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,825 copying scripts/tests/test_json_merge_entries.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,827 copying scripts/tests/test_tractogram_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,829 copying scripts/tests/test_volume_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,831 copying scripts/tests/test_bundle_mean_fixel_bingham_metric.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,833 copying scripts/tests/test_viz_dti_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,835 copying scripts/tests/test_volume_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,837 copying scripts/tests/test_tractogram_filter_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,840 copying scripts/tests/test_tracking_pft_maps_edit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,842 copying scripts/tests/test_volume_resample.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,844 copying scripts/tests/test_volume_crop.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,846 copying scripts/tests/test_connectivity_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,848 copying scripts/tests/test_labels_dilate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,850 copying scripts/tests/test_tractogram_assign_custom_color.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,852 copying scripts/tests/test_bundle_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,853 copying scripts/tests/test_bundle_score_many_bundles_one_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,855 copying scripts/tests/test_bundle_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,857 copying scripts/tests/test_header_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,859 copying scripts/tests/test_viz_volume_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,862 copying scripts/tests/test_connectivity_compare_populations.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,863 copying scripts/tests/test_tractogram_dpp_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,865 copying scripts/tests/test_search_keywords.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,867 copying scripts/tests/test_volume_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,869 copying scripts/tests/test_tractogram_assign_uniform_color.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,871 copying scripts/tests/test_bundle_uniformize_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,872 copying scripts/tests/test_viz_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,874 copying scripts/tests/test_bundle_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,876 copying scripts/tests/test_bundle_filter_by_occurence.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,878 copying scripts/tests/test_bundle_generate_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,879 copying scripts/tests/test_connectivity_compute_matrices.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,881 copying scripts/tests/test_viz_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,883 copying scripts/tests/test_dwi_split_by_indices.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,885 copying scripts/tests/test_tracking_local_dev.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,886 copying scripts/tests/test_viz_tractogram_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,888 copying scripts/tests/test_bingham_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,890 copying scripts/tests/test_volume_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,891 copying scripts/tests/test_tractogram_split.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,893 copying scripts/tests/test_dwi_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,895 copying scripts/tests/test_json_convert_entries_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,897 copying scripts/tests/test_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,899 copying scripts/tests/test_tractogram_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,900 copying scripts/tests/test_bundle_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,902 copying scripts/tests/test_viz_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,904 copying scripts/tests/test_tractogram_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,906 copying scripts/tests/test_dwi_convert_FDF.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,908 copying scripts/tests/test_tractogram_segment_bundles_for_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,910 copying scripts/tests/test_frf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,912 copying scripts/tests/test_tractogram_compute_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,914 copying scripts/tests/test_frf_set_diffusivities.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,915 copying scripts/tests/test_dki_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,917 copying scripts/tests/test_json_harmonize_entries.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,919 copying scripts/tests/test_gradients_modify_axes.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,921 copying scripts/tests/test_volume_stats_in_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,923 copying scripts/tests/test_tractogram_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,924 copying scripts/tests/test_volume_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,926 copying scripts/tests/test_dwi_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,928 copying scripts/tests/test_dwi_detect_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,930 copying scripts/tests/test_frf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,932 copying scripts/tests/test_plot_stats_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,934 copying scripts/tests/test_gradients_round_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,936 copying scripts/tests/test_dwi_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,938 copying scripts/tests/test_NODDI_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,939 copying scripts/tests/test_tractogram_detect_loops.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,941 copying scripts/tests/test_sh_to_aodf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,943 copying scripts/tests/test_tractogram_segment_and_score.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,945 copying scripts/tests/test_aodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,947 copying scripts/tests/test_gradients_validate_correct.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,949 copying scripts/tests/test_fodf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,951 copying scripts/tests/test_tractogram_commit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,952 copying scripts/tests/test_viz_gradients_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,954 copying scripts/tests/test_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,956 copying scripts/tests/test_connectivity_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,958 copying scripts/tests/test_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,960 copying scripts/tests/test_sh_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,963 copying scripts/tests/test_bundle_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,964 copying scripts/tests/test_surface_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,967 copying scripts/tests/test_tractogram_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,969 copying scripts/tests/test_stats_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,971 copying scripts/tests/test_sh_fusion.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,972 copying scripts/tests/test_lesions_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,974 copying scripts/tests/test_labels_split_volume_from_lut.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,976 copying scripts/tests/test_dwi_apply_bias_field.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,978 copying scripts/tests/test_tracking_local.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,980 copying scripts/tests/test_dwi_reorder_philips.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,983 copying scripts/tests/test_tractogram_resample.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,985 copying scripts/tests/test_sh_to_rish.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,987 copying scripts/tests/test_volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,989 copying scripts/tests/test_viz_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,991 copying scripts/tests/test_fodf_to_bingham.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,992 copying scripts/tests/test_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,994 copying scripts/tests/test_bundle_score_same_bundle_many_segmentations.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,996 copying scripts/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,997 copying scripts/tests/test_tractogram_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:35,999 copying scripts/tests/test_tractogram_segment_one_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,001 copying scripts/tests/test_tractogram_shuffle.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,003 copying scripts/tests/test_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,004 copying scripts/tests/test_connectivity_print_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,006 copying scripts/tests/test_tractogram_resample_nb_points.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,008 copying scripts/tests/test_tractogram_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,010 copying scripts/tests/test_viz_volume_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,011 copying scripts/tests/test_tractogram_filter_by_roi.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,013 copying scripts/tests/test_connectivity_filter.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,015 copying scripts/tests/test_tractogram_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,017 copying scripts/tests/test_tractogram_convert_hdf5_to_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,019 copying scripts/tests/test_sh_to_sf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,021 copying scripts/tests/test_mti_adjust_B1_header.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,023 copying scripts/tests/test_tractogram_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,024 copying scripts/tests/test_labels_remove.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,026 copying scripts/tests/test_tractogram_filter_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,028 copying scripts/tests/test_frf_mean.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,030 copying scripts/tests/test_connectivity_reorder_rois.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,031 copying scripts/tests/test_bundle_shape_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,033 copying scripts/tests/test_tractogram_compute_TODI.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,035 copying scripts/tests/test_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,037 copying scripts/tests/test_mti_maps_MT.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,039 copying scripts/tests/test_dwi_compute_snr.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,041 copying scripts/tests/test_volume_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,043 copying scripts/tests/test_bundle_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,045 copying scripts/tests/test_mti_maps_ihMT.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,047 copying scripts/tests/test_tracking_pft.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,049 copying scripts/tests/test_bids_validate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,051 copying scripts/tests/test_tractogram_filter_by_anatomy.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,053 copying scripts/tests/test_viz_bundle_screenshot_mni.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,055 copying scripts/tests/test_viz_bundle_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,057 copying scripts/tests/test_viz_tractogram_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,059 copying scripts/tests/test_connectivity_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,061 copying scripts/tests/test_tractogram_project_map_to_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,063 copying scripts/tests/test_tractogram_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,064 copying scripts/tests/test_fodf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,066 copying scripts/tests/test_header_validate_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,068 copying scripts/tests/test_bundle_reject_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,070 copying scripts/tests/test_connectivity_pairwise_agreement.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,071 copying scripts/tests/test_gradients_validate_correct_eddy.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,073 copying scripts/tests/test_tractogram_segment_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,075 copying scripts/tests/test_bundle_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,077 copying scripts/tests/test_tractogram_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-05-10T18:02:36,085 creating build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,086 copying scripts/legacy/scil_screenshot_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,088 copying scripts/legacy/scil_convert_json_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,090 copying scripts/legacy/scil_convert_fdf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,091 copying scripts/legacy/scil_compute_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,093 copying scripts/legacy/scil_reorder_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,095 copying scripts/legacy/scil_convert_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,097 copying scripts/legacy/scil_crop_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,099 copying scripts/legacy/scil_perform_majority_vote.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,100 copying scripts/legacy/scil_decompose_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,102 copying scripts/legacy/scil_plot_mean_std_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,104 copying scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,106 copying scripts/legacy/scil_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,108 copying scripts/legacy/scil_visualize_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,109 copying scripts/legacy/scil_compute_asym_odf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,111 copying scripts/legacy/scil_smooth_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,113 copying scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,115 copying scripts/legacy/scil_compute_ihMT_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,117 copying scripts/legacy/scil_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,119 copying scripts/legacy/scil_resample_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,120 copying scripts/legacy/scil_convert_sh_basis.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,122 copying scripts/legacy/scil_resample_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,124 copying scripts/legacy/scil_compute_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,126 copying scripts/legacy/scil_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,128 copying scripts/legacy/scil_compute_pft.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,130 copying scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,132 copying scripts/legacy/scil_compute_divide.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,134 copying scripts/legacy/scil_visualize_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,136 copying scripts/legacy/scil_assign_uniform_color_to_tractograms.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,138 copying scripts/legacy/scil_fix_dsi_studio_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,140 copying scripts/legacy/scil_execute_asymmetric_filtering.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,142 copying scripts/legacy/scil_print_header.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,143 copying scripts/legacy/scil_compute_sh_from_signal.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,145 copying scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,147 copying scripts/legacy/scil_compute_memsmt_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,148 copying scripts/legacy/scil_filter_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,150 copying scripts/legacy/scil_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,152 copying scripts/legacy/scil_compute_streamlines_length_stats.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,154 copying scripts/legacy/scil_uniformize_streamlines_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,156 copying scripts/legacy/scil_compute_streamlines_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,158 copying scripts/legacy/scil_combine_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,160 copying scripts/legacy/scil_generate_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,161 copying scripts/legacy/scil_validate_bids.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,163 copying scripts/legacy/scil_filter_streamlines_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,165 copying scripts/legacy/scil_compute_msmt_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,167 copying scripts/legacy/scil_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,168 copying scripts/legacy/scil_score_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,171 copying scripts/legacy/scil_compute_rish_from_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,172 copying scripts/legacy/scil_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,174 copying scripts/legacy/scil_convert_rgb.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,177 copying scripts/legacy/scil_filter_streamlines_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,178 copying scripts/legacy/scil_apply_transform_to_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,180 copying scripts/legacy/scil_outlier_rejection.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,182 copying scripts/legacy/scil_apply_transform_to_image.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,184 copying scripts/legacy/scil_shuffle_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,186 copying scripts/legacy/scil_compute_ssst_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,187 copying scripts/legacy/scil_remove_invalid_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,189 copying scripts/legacy/scil_score_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,191 copying scripts/legacy/scil_analyse_lesions_load.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,193 copying scripts/legacy/scil_detect_dwi_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,194 copying scripts/legacy/scil_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,196 copying scripts/legacy/scil_visualize_bundles_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,198 copying scripts/legacy/scil_reorder_dwi_philips.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,200 copying scripts/legacy/scil_flip_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,202 copying scripts/legacy/scil_normalize_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,203 copying scripts/legacy/scil_extract_dwi_shell.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,205 copying scripts/legacy/scil_convert_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,207 copying scripts/legacy/scil_set_response_function.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,209 copying scripts/legacy/scil_evaluate_bundles_individual_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,211 copying scripts/legacy/scil_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,212 copying scripts/legacy/scil_compute_bundle_mean_std_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,214 copying scripts/legacy/scil_run_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,216 copying scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,218 copying scripts/legacy/scil_compute_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,219 copying scripts/legacy/scil_flip_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,224 copying scripts/legacy/scil_compute_MT_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,229 copying scripts/legacy/scil_split_volume_by_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,230 copying scripts/legacy/scil_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,232 copying scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,234 copying scripts/legacy/scil_fit_bingham_to_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,237 copying scripts/legacy/scil_visualize_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,239 copying scripts/legacy/scil_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,240 copying scripts/legacy/scil_compute_kurtosis_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,242 copying scripts/legacy/scil_compute_memsmt_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,244 copying scripts/legacy/scil_flip_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,246 copying scripts/legacy/scil_compress_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,248 copying scripts/legacy/scil_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,249 copying scripts/legacy/scil_compute_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,251 copying scripts/legacy/scil_compute_local_tracking_dev.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,253 copying scripts/legacy/scil_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,255 copying scripts/legacy/scil_generate_priors_from_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,257 copying scripts/legacy/scil_compute_bundle_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,259 copying scripts/legacy/scil_filter_tractogram_anatomically.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,260 copying scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,262 copying scripts/legacy/scil_concatenate_dwi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,264 copying scripts/legacy/scil_evaluate_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,266 copying scripts/legacy/scil_compute_mean_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,267 copying scripts/legacy/scil_recognize_single_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,269 copying scripts/legacy/scil_apply_transform_to_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,271 copying scripts/legacy/scil_swap_gradient_axis.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,272 copying scripts/legacy/scil_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,274 copying scripts/legacy/scil_compute_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,276 copying scripts/legacy/scil_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,278 copying scripts/legacy/scil_compute_ssst_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,279 copying scripts/legacy/scil_compute_sf_from_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,281 copying scripts/legacy/scil_recognize_multi_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,283 copying scripts/legacy/scil_compute_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,285 copying scripts/legacy/scil_compute_local_tracking.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,287 copying scripts/legacy/scil_compute_NODDI.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,289 copying scripts/legacy/scil_validate_and_correct_eddy_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,290 copying scripts/legacy/scil_save_connections_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,292 copying scripts/legacy/scil_visualize_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,294 copying scripts/legacy/scil_detect_streamlines_loops.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,296 copying scripts/legacy/scil_compute_msmt_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,298 copying scripts/legacy/scil_snr_in_roi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,300 copying scripts/legacy/scil_compute_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,302 copying scripts/legacy/scil_streamlines_math.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,303 copying scripts/legacy/scil_visualize_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,305 copying scripts/legacy/scil_validate_and_correct_bvecs.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,307 copying scripts/legacy/scil_visualize_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,309 copying scripts/legacy/scil_apply_transform_to_bvecs.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,311 copying scripts/legacy/scil_run_commit.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,312 copying scripts/legacy/scil_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,314 copying scripts/legacy/scil_compute_todi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,316 copying scripts/legacy/scil_split_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,318 copying scripts/legacy/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,319 copying scripts/legacy/scil_compute_freewater.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,321 copying scripts/legacy/scil_add_tracking_mask_to_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,323 copying scripts/legacy/scil_image_math.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,324 copying scripts/legacy/scil_compute_bundle_voxel_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,326 copying scripts/legacy/scil_visualize_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,328 copying scripts/legacy/scil_split_image.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,330 copying scripts/legacy/scil_visualize_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,331 copying scripts/legacy/scil_flip_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,333 copying scripts/legacy/scil_verify_space_attributes_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,335 copying scripts/legacy/scil_screenshot_dti.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,337 copying scripts/legacy/scil_assign_custom_color_to_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,339 copying scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,340 copying scripts/legacy/scil_visualize_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,342 copying scripts/legacy/scil_merge_json.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,344 copying scripts/legacy/scil_apply_bias_field_on_dwi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,346 copying scripts/legacy/scil_estimate_bundles_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,348 copying scripts/legacy/scil_compute_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,350 copying scripts/legacy/scil_print_connectivity_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,352 copying scripts/legacy/scil_compute_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,353 copying scripts/legacy/scil_remove_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,356 copying scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,358 copying scripts/legacy/scil_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,359 copying scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,361 copying scripts/legacy/scil_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,363 copying scripts/legacy/scil_compute_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,365 copying scripts/legacy/scil_smooth_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,367 copying scripts/legacy/scil_resample_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,369 copying scripts/legacy/scil_compute_metrics_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,370 copying scripts/legacy/scil_dilate_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,373 copying scripts/legacy/scil_compute_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,374 copying scripts/legacy/scil_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,376 copying scripts/legacy/scil_register_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,378 copying scripts/legacy/scil_merge_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,380 copying scripts/legacy/scil_compute_seed_by_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,382 copying scripts/legacy/scil_filter_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,384 copying scripts/legacy/scil_resample_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,386 copying scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,388 copying scripts/legacy/scil_compute_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,390 copying scripts/legacy/scil_screenshot_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,392 copying scripts/legacy/scil_compare_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,394 copying scripts/legacy/scil_harmonize_json.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,396 copying scripts/legacy/scil_screenshot_volume_mosaic_overlap.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-05-10T18:02:36,398 running egg_info 2024-05-10T18:02:36,467 writing scilpy.egg-info/PKG-INFO 2024-05-10T18:02:36,471 writing dependency_links to scilpy.egg-info/dependency_links.txt 2024-05-10T18:02:36,489 writing entry points to scilpy.egg-info/entry_points.txt 2024-05-10T18:02:36,493 writing requirements to scilpy.egg-info/requires.txt 2024-05-10T18:02:36,495 writing top-level names to scilpy.egg-info/top_level.txt 2024-05-10T18:02:36,582 reading manifest file 'scilpy.egg-info/SOURCES.txt' 2024-05-10T18:02:36,599 reading manifest template 'MANIFEST.in' 2024-05-10T18:02:36,645 warning: no files found matching '*.c' under directory 'scilpy' 2024-05-10T18:02:36,689 warning: no files found matching '*.cpp' under directory 'scilpy' 2024-05-10T18:02:36,733 adding license file 'LICENSE' 2024-05-10T18:02:36,765 writing manifest file 'scilpy.egg-info/SOURCES.txt' 2024-05-10T18:02:36,790 copying scilpy/tractanalysis/grid_intersections.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:36,793 copying scilpy/tractanalysis/quick_tools.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:36,795 copying scilpy/tractanalysis/streamlines_metrics.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:02:36,797 copying scilpy/tractograms/uncompress.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:36,836 running build_ext 2024-05-10T18:02:37,862 Compiling scilpy/tractograms/uncompress.pyx because it changed. 2024-05-10T18:02:37,862 Compiling scilpy/tractanalysis/quick_tools.pyx because it changed. 2024-05-10T18:02:37,863 Compiling scilpy/tractanalysis/grid_intersections.pyx because it changed. 2024-05-10T18:02:37,863 Compiling scilpy/tractanalysis/streamlines_metrics.pyx because it changed. 2024-05-10T18:02:37,864 [1/4] Cythonizing scilpy/tractanalysis/grid_intersections.pyx 2024-05-10T18:02:39,080 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-2x55pvc2/scilpy_3acf8b1d8d9e4f2eb3fbf718a606e547/scilpy/tractanalysis/grid_intersections.pyx 2024-05-10T18:02:39,081 tree = Parsing.p_module(s, pxd, full_module_name) 2024-05-10T18:02:39,860 performance hint: scilpy/tractanalysis/grid_intersections.pyx:89:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-05-10T18:02:39,860 Possible solutions: 2024-05-10T18:02:39,860 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:39,860 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-05-10T18:02:39,860 performance hint: scilpy/tractanalysis/grid_intersections.pyx:100:5: Exception check on 'copypoint_f' will always require the GIL to be acquired. 2024-05-10T18:02:39,861 Possible solutions: 2024-05-10T18:02:39,861 1. Declare 'copypoint_f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:39,861 2. Use an 'int' return type on 'copypoint_f' to allow an error code to be returned. 2024-05-10T18:02:39,861 performance hint: scilpy/tractanalysis/grid_intersections.pyx:107:5: Exception check on 'copypoint_d' will always require the GIL to be acquired. 2024-05-10T18:02:39,861 Possible solutions: 2024-05-10T18:02:39,861 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:39,861 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-05-10T18:02:39,862 performance hint: scilpy/tractanalysis/grid_intersections.pyx:114:5: Exception check on 'copypoint_f2d' will always require the GIL to be acquired. 2024-05-10T18:02:39,862 Possible solutions: 2024-05-10T18:02:39,862 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:39,862 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-05-10T18:02:39,862 performance hint: scilpy/tractanalysis/grid_intersections.pyx:121:5: Exception check on 'copypoint_d2f' will always require the GIL to be acquired. 2024-05-10T18:02:39,862 Possible solutions: 2024-05-10T18:02:39,862 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:39,863 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-05-10T18:02:40,416 warning: scilpy/tractanalysis/grid_intersections.pyx:270:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:40,416 warning: scilpy/tractanalysis/grid_intersections.pyx:271:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:40,417 warning: scilpy/tractanalysis/grid_intersections.pyx:272:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:40,420 warning: scilpy/tractanalysis/grid_intersections.pyx:297:38: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:40,420 warning: scilpy/tractanalysis/grid_intersections.pyx:297:65: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:41,754 performance hint: scilpy/tractanalysis/grid_intersections.pyx:162:19: Exception check after calling 'copypoint_f' will always require the GIL to be acquired. 2024-05-10T18:02:41,754 Possible solutions: 2024-05-10T18:02:41,754 1. Declare 'copypoint_f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,754 2. Use an 'int' return type on 'copypoint_f' to allow an error code to be returned. 2024-05-10T18:02:41,756 performance hint: scilpy/tractanalysis/grid_intersections.pyx:179:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-05-10T18:02:41,756 Possible solutions: 2024-05-10T18:02:41,756 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,756 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-05-10T18:02:41,757 performance hint: scilpy/tractanalysis/grid_intersections.pyx:180:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-05-10T18:02:41,757 Possible solutions: 2024-05-10T18:02:41,757 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,757 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-05-10T18:02:41,757 performance hint: scilpy/tractanalysis/grid_intersections.pyx:185:29: Exception check after calling 'copypoint_f2d' will always require the GIL to be acquired. 2024-05-10T18:02:41,757 Possible solutions: 2024-05-10T18:02:41,757 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,758 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-05-10T18:02:41,758 performance hint: scilpy/tractanalysis/grid_intersections.pyx:186:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-05-10T18:02:41,758 Possible solutions: 2024-05-10T18:02:41,758 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,758 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-05-10T18:02:41,758 performance hint: scilpy/tractanalysis/grid_intersections.pyx:190:25: Exception check after calling 'copypoint_f2d' will always require the GIL to be acquired. 2024-05-10T18:02:41,758 Possible solutions: 2024-05-10T18:02:41,758 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,759 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-05-10T18:02:41,762 performance hint: scilpy/tractanalysis/grid_intersections.pyx:217:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-05-10T18:02:41,762 Possible solutions: 2024-05-10T18:02:41,762 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,762 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-05-10T18:02:41,764 performance hint: scilpy/tractanalysis/grid_intersections.pyx:235:34: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. 2024-05-10T18:02:41,764 Possible solutions: 2024-05-10T18:02:41,764 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,764 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-05-10T18:02:41,765 performance hint: scilpy/tractanalysis/grid_intersections.pyx:254:33: Exception check after calling 'copypoint_d2f' will always require the GIL to be acquired. 2024-05-10T18:02:41,765 Possible solutions: 2024-05-10T18:02:41,766 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,766 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-05-10T18:02:41,768 performance hint: scilpy/tractanalysis/grid_intersections.pyx:273:33: Exception check after calling 'copypoint_d2f' will always require the GIL to be acquired. 2024-05-10T18:02:41,768 Possible solutions: 2024-05-10T18:02:41,768 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:41,768 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-05-10T18:02:41,957 [2/4] Cythonizing scilpy/tractanalysis/quick_tools.pyx 2024-05-10T18:02:41,973 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-2x55pvc2/scilpy_3acf8b1d8d9e4f2eb3fbf718a606e547/scilpy/tractanalysis/quick_tools.pyx 2024-05-10T18:02:41,973 tree = Parsing.p_module(s, pxd, full_module_name) 2024-05-10T18:02:44,269 [3/4] Cythonizing scilpy/tractanalysis/streamlines_metrics.pyx 2024-05-10T18:02:44,284 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-2x55pvc2/scilpy_3acf8b1d8d9e4f2eb3fbf718a606e547/scilpy/tractanalysis/streamlines_metrics.pyx 2024-05-10T18:02:44,284 tree = Parsing.p_module(s, pxd, full_module_name) 2024-05-10T18:02:45,519 performance hint: scilpy/tractanalysis/streamlines_metrics.pyx:26:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-05-10T18:02:45,519 Possible solutions: 2024-05-10T18:02:45,519 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:45,519 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-05-10T18:02:47,104 [4/4] Cythonizing scilpy/tractograms/uncompress.pyx 2024-05-10T18:02:47,763 performance hint: scilpy/tractograms/uncompress.pyx:141:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-05-10T18:02:47,764 Possible solutions: 2024-05-10T18:02:47,764 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:47,764 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-05-10T18:02:48,501 warning: scilpy/tractograms/uncompress.pyx:192:47: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:48,501 warning: scilpy/tractograms/uncompress.pyx:192:74: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:48,522 warning: scilpy/tractograms/uncompress.pyx:357:38: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:48,522 warning: scilpy/tractograms/uncompress.pyx:357:65: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:48,523 warning: scilpy/tractograms/uncompress.pyx:359:42: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:48,523 warning: scilpy/tractograms/uncompress.pyx:359:73: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-05-10T18:02:49,701 performance hint: scilpy/tractograms/uncompress.pyx:282:34: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. 2024-05-10T18:02:49,701 Possible solutions: 2024-05-10T18:02:49,701 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-05-10T18:02:49,702 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-05-10T18:02:49,844 building 'scilpy.tractograms.uncompress' extension 2024-05-10T18:02:49,845 creating build/temp.linux-armv7l-cpython-39 2024-05-10T18:02:49,845 creating build/temp.linux-armv7l-cpython-39/scilpy 2024-05-10T18:02:49,846 creating build/temp.linux-armv7l-cpython-39/scilpy/tractograms 2024-05-10T18:02:49,848 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractograms/uncompress.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.o 2024-05-10T18:02:50,206 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-05-10T18:02:50,206 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-05-10T18:02:50,207 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-05-10T18:02:50,207 from scilpy/tractograms/uncompress.c:1241: 2024-05-10T18:02:50,207 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-05-10T18:02:50,207 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-05-10T18:02:50,207 | ^~~~~~~ 2024-05-10T18:03:12,469 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so 2024-05-10T18:03:12,646 building 'scilpy.tractanalysis.quick_tools' extension 2024-05-10T18:03:12,646 creating build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-05-10T18:03:12,647 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/quick_tools.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.o 2024-05-10T18:03:12,977 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-05-10T18:03:12,977 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-05-10T18:03:12,977 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-05-10T18:03:12,977 from scilpy/tractanalysis/quick_tools.c:1240: 2024-05-10T18:03:12,977 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-05-10T18:03:12,978 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-05-10T18:03:12,978 | ^~~~~~~ 2024-05-10T18:03:31,066 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so 2024-05-10T18:03:31,223 building 'scilpy.tractanalysis.grid_intersections' extension 2024-05-10T18:03:31,224 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/grid_intersections.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.o 2024-05-10T18:03:31,549 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-05-10T18:03:31,549 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-05-10T18:03:31,549 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-05-10T18:03:31,549 from scilpy/tractanalysis/grid_intersections.c:1241: 2024-05-10T18:03:31,549 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-05-10T18:03:31,549 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-05-10T18:03:31,550 | ^~~~~~~ 2024-05-10T18:03:52,183 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so 2024-05-10T18:03:52,359 building 'scilpy.tractanalysis.streamlines_metrics' extension 2024-05-10T18:03:52,360 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/streamlines_metrics.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.o 2024-05-10T18:03:52,695 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-05-10T18:03:52,695 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-05-10T18:03:52,695 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-05-10T18:03:52,695 from scilpy/tractanalysis/streamlines_metrics.c:1240: 2024-05-10T18:03:52,696 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-05-10T18:03:52,696 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-05-10T18:03:52,696 | ^~~~~~~ 2024-05-10T18:04:14,891 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so 2024-05-10T18:04:15,103 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-10T18:04:15,104 !! 2024-05-10T18:04:15,104 ******************************************************************************** 2024-05-10T18:04:15,104 Please avoid running ``setup.py`` directly. 2024-05-10T18:04:15,104 Instead, use pypa/build, pypa/installer or other 2024-05-10T18:04:15,105 standards-based tools. 2024-05-10T18:04:15,105 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-10T18:04:15,105 ******************************************************************************** 2024-05-10T18:04:15,105 !! 2024-05-10T18:04:15,105 self.initialize_options() 2024-05-10T18:04:15,138 installing to build/bdist.linux-armv7l/wheel 2024-05-10T18:04:15,138 running install 2024-05-10T18:04:15,164 running install_lib 2024-05-10T18:04:15,197 creating build/bdist.linux-armv7l 2024-05-10T18:04:15,198 creating build/bdist.linux-armv7l/wheel 2024-05-10T18:04:15,199 creating build/bdist.linux-armv7l/wheel/scilpy 2024-05-10T18:04:15,201 creating build/bdist.linux-armv7l/wheel/scilpy/utils 2024-05-10T18:04:15,202 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/metrics_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-05-10T18:04:15,204 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/spatial.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-05-10T18:04:15,207 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-05-10T18:04:15,208 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/filenames.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-05-10T18:04:15,210 creating build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,211 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_math.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,214 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,217 copying build/lib.linux-armv7l-cpython-39/scilpy/image/reslice.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,219 copying build/lib.linux-armv7l-cpython-39/scilpy/image/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,221 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_space_management.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,223 copying build/lib.linux-armv7l-cpython-39/scilpy/image/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,225 creating build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-05-10T18:04:15,226 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_volume_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-05-10T18:04:15,228 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_volume_math.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-05-10T18:04:15,231 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_labels.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-05-10T18:04:15,233 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-05-10T18:04:15,234 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,236 copying build/lib.linux-armv7l-cpython-39/scilpy/image/labels.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-05-10T18:04:15,239 creating build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,240 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,243 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/seed.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,245 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/propagator.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,248 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,249 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/tracker.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-05-10T18:04:15,252 creating build/bdist.linux-armv7l/wheel/scilpy/stats 2024-05-10T18:04:15,253 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-05-10T18:04:15,256 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-05-10T18:04:15,257 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/stats.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-05-10T18:04:15,260 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/matrix_stats.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-05-10T18:04:15,262 copying build/lib.linux-armv7l-cpython-39/scilpy/version.py -> build/bdist.linux-armv7l/wheel/scilpy 2024-05-10T18:04:15,264 creating build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-05-10T18:04:15,265 copying build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel/opencl_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-05-10T18:04:15,267 copying build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-05-10T18:04:15,269 creating build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-05-10T18:04:15,270 copying build/lib.linux-armv7l-cpython-39/scilpy/denoise/asym_filtering.py -> build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-05-10T18:04:15,272 copying build/lib.linux-armv7l-cpython-39/scilpy/denoise/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-05-10T18:04:15,274 creating build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,275 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/recobundlesx.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,277 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,280 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/models.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,282 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/voting_scheme.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,284 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,285 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/tractogram_from_roi.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-05-10T18:04:15,288 creating build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-05-10T18:04:15,289 copying build/lib.linux-armv7l-cpython-39/scilpy/connectivity/connectivity_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-05-10T18:04:15,291 copying build/lib.linux-armv7l-cpython-39/scilpy/connectivity/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-05-10T18:04:15,294 creating build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,294 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/distance_to_centroid.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,296 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,319 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/reproducibility_measures.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,322 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/scoring.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,325 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,326 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,329 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,351 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/afd_along_streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,353 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/bundle_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,356 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/tools.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,357 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,360 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/bingham_metric_along_streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,362 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/todi_util.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,364 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,365 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/json_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,367 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/todi.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,369 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-05-10T18:04:15,386 creating build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,387 copying build/lib.linux-armv7l-cpython-39/scilpy/io/streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,389 copying build/lib.linux-armv7l-cpython-39/scilpy/io/image.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,391 copying build/lib.linux-armv7l-cpython-39/scilpy/io/varian_fdf.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,394 copying build/lib.linux-armv7l-cpython-39/scilpy/io/hdf5.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,396 copying build/lib.linux-armv7l-cpython-39/scilpy/io/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,399 copying build/lib.linux-armv7l-cpython-39/scilpy/io/deprecator.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,400 copying build/lib.linux-armv7l-cpython-39/scilpy/io/fetcher.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,402 copying build/lib.linux-armv7l-cpython-39/scilpy/io/dvc.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,404 copying build/lib.linux-armv7l-cpython-39/scilpy/io/mti.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,407 copying build/lib.linux-armv7l-cpython-39/scilpy/io/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,408 copying build/lib.linux-armv7l-cpython-39/scilpy/io/tensor.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,410 copying build/lib.linux-armv7l-cpython-39/scilpy/io/btensor.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,412 copying build/lib.linux-armv7l-cpython-39/scilpy/io/gradients.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-05-10T18:04:15,414 creating build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,415 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/bvec_bval_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,418 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,419 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,421 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/gen_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,423 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/optimize_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-05-10T18:04:15,426 copying build/lib.linux-armv7l-cpython-39/scilpy/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy 2024-05-10T18:04:15,428 creating build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,428 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/lazy_tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,430 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,433 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/dps_and_dpp_management.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,435 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,459 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,461 creating build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,461 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_streamline_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,464 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_streamline_and_mask_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,466 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,467 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,469 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_dps_and_dpp_management.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-05-10T18:04:15,472 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,474 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/streamline_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,477 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/streamline_and_mask_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-05-10T18:04:15,480 creating build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-05-10T18:04:15,481 copying build/lib.linux-armv7l-cpython-39/scilpy/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-05-10T18:04:15,482 copying build/lib.linux-armv7l-cpython-39/scilpy/preprocessing/distortion_correction.py -> build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-05-10T18:04:15,485 creating build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,486 creating build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-05-10T18:04:15,487 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/pil.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-05-10T18:04:15,489 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-05-10T18:04:15,490 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/fury.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-05-10T18:04:15,493 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/vtk.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-05-10T18:04:15,495 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,497 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/screenshot.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,499 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/color.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,501 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/slice.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,503 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,505 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/gradients.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-05-10T18:04:15,507 creating build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-05-10T18:04:15,508 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy/chord_chart.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-05-10T18:04:15,511 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-05-10T18:04:15,513 creating build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,514 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/fiber_coherence.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,516 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/fodf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,518 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/aodf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,520 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,521 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/bingham.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,523 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/sh.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,526 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/mti.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,528 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/divide.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,531 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,532 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/frf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-05-10T18:04:15,535 creating build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-05-10T18:04:15,536 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/operations.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-05-10T18:04:15,538 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-05-10T18:04:15,540 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-05-10T18:04:15,542 creating build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-05-10T18:04:15,543 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/test_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-05-10T18:04:15,545 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-05-10T18:04:15,546 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-05-10T18:04:15,551 creating build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,552 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_smooth.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,553 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_generate_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,555 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_pairwise_agreement.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,557 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,560 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_combine.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,562 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_mean.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,563 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,565 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,567 copying build/lib.linux-armv7l-cpython-39/scripts/scil_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,569 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,571 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_shape_measures.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,573 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_and_score.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,576 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_set_diffusivities.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,577 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_histogram.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,579 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,582 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_aodf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,584 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_local.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,586 copying build/lib.linux-armv7l-cpython-39/scripts/scil_btensor_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,588 copying build/lib.linux-armv7l-cpython-39/scripts/scil_rgb_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,590 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_project_map_to_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,592 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_generate_sampling.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,594 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,596 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_qbx.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,597 copying build/lib.linux-armv7l-cpython-39/scripts/scil_aodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,599 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,601 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_to_sh.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,603 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_bundles.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,605 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_length.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,607 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_shuffle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,609 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_sf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,611 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,613 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_convert_FDF.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,615 copying build/lib.linux-armv7l-cpython-39/scripts/scil_plot_stats_per_point.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,617 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_detect_loops.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,619 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_print_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,621 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_validate_correct_eddy.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,623 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_detect_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,624 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_assign_custom_color.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,626 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,629 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,630 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,633 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_local_dev.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,635 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compare_populations.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,637 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_convert_hdf5_to_trk.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,639 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_extract_shell.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,641 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_gradients_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,644 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_label_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,646 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_resample_nb_points.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,648 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_assign_uniform_color.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,650 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_merge_entries.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,651 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_dilate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,653 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,655 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,658 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_reject_outliers.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,659 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,661 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,663 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,666 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_commit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,668 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_adjust_B1_header.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,670 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,672 copying build/lib.linux-armv7l-cpython-39/scripts/scil_header_validate_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,674 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_resample.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,676 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,677 copying build/lib.linux-armv7l-cpython-39/scripts/scil_header_print_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,679 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,681 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,683 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,685 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dti_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,687 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_uniformize_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,689 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_convert_entries_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,691 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,693 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_anatomy.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,696 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_bundles_for_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,698 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compress.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,700 copying build/lib.linux-armv7l-cpython-39/scripts/scil_denoising_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,702 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_normalize.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,704 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,706 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,708 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compute_matrices.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,711 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_fodf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,713 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_modify_axes.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,715 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_concatenate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,717 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle_screenshot_mni.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,719 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_dti_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,721 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_harmonize_entries.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,723 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_bingham_metric.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,724 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_register.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,726 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,729 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,732 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,734 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,737 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,738 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,740 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,742 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,744 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dki_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,746 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,748 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_maps_MT.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,750 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,752 copying build/lib.linux-armv7l-cpython-39/scripts/scil_NODDI_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,754 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,756 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_to_bingham.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,758 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compute_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,760 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_filter_by_occurence.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,762 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,764 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bids_validate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,766 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,768 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_crop.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,770 copying build/lib.linux-armv7l-cpython-39/scripts/scil_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,772 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_print_filenames.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,774 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_split_by_indices.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,775 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_split.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,778 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,780 copying build/lib.linux-armv7l-cpython-39/scripts/scil_freewater_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,782 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,784 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,786 copying build/lib.linux-armv7l-cpython-39/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,787 copying build/lib.linux-armv7l-cpython-39/scripts/scil_lesions_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,789 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,791 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_afd.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,793 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_split_volume_from_lut.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,795 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,796 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_fusion.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,798 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_compute_snr.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,800 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_apply_bias_field.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,802 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_score_same_bundle_many_segmentations.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:15,812 creating build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,813 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_smooth.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,815 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_denoising_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,817 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,818 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_afd.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,820 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_generate_sampling.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,822 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,823 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_to_sh.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,825 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dti_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,827 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,828 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_freewater_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,830 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_remove_invalid.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,832 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,834 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,836 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_concatenate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,838 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,839 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_register.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,841 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_btensor_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,843 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,845 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_extract_shell.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,847 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_freewater_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,849 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,851 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_fix_trk.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,852 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compress.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,854 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_rgb_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,856 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,857 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,859 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,861 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,863 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_normalize.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,864 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,866 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,868 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_combine.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,870 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,871 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,873 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,875 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_merge_entries.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,876 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,878 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,880 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_bingham_metric.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,881 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_dti_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,883 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,885 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_length.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,886 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft_maps_edit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,888 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_resample.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,890 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_crop.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,891 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,893 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_dilate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,895 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_assign_custom_color.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,897 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,899 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_score_many_bundles_one_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,901 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_label_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,902 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_header_print_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,904 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,906 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compare_populations.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,908 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_dpp_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,909 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_search_keywords.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,911 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,913 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_assign_uniform_color.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,915 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_uniformize_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,917 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,919 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,920 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_filter_by_occurence.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,923 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_generate_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,924 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compute_matrices.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,926 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,928 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_split_by_indices.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,929 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_local_dev.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,931 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_tractogram_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,932 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bingham_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,934 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,936 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_split.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,938 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,939 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_convert_entries_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,941 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,942 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_smooth.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,944 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,946 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,947 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_qbx.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,949 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_convert_FDF.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,951 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_bundles_for_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,952 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,954 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compute_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,956 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_set_diffusivities.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,957 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dki_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,959 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_harmonize_entries.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,961 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_modify_axes.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,962 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_stats_in_labels.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,964 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,965 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,967 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,969 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_detect_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,970 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,972 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_plot_stats_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,974 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_round_bvals.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,976 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,977 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_NODDI_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,979 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_detect_loops.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,980 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_aodf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,982 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_and_score.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,984 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_aodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,986 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_validate_correct.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,987 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,989 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_commit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,991 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_gradients_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,992 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,994 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,995 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,997 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:15,999 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,001 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,002 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,004 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_stats_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,006 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_fusion.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,008 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_lesions_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,009 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_split_volume_from_lut.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,011 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_apply_bias_field.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,013 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_local.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,015 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_reorder_philips.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,016 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_resample.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,018 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_rish.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,020 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,022 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,023 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_to_bingham.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,025 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,027 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_score_same_bundle_many_segmentations.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,028 copying build/lib.linux-armv7l-cpython-39/scripts/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,030 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,031 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_one_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,033 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_shuffle.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,035 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,036 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_print_filenames.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,038 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_resample_nb_points.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,040 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,041 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_histogram.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,043 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_roi.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,045 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_filter.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,046 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,048 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_convert_hdf5_to_trk.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,050 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_sf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,052 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_adjust_B1_header.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,053 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,055 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_remove.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,056 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,058 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_mean.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,060 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_reorder_rois.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,062 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_shape_measures.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,063 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compute_TODI.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,065 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,067 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_maps_MT.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,069 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_compute_snr.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,070 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,072 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,074 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_maps_ihMT.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,076 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,078 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bids_validate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,080 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_anatomy.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,082 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle_screenshot_mni.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,084 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,086 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_tractogram_seeds.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,087 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,089 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_project_map_to_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,091 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,093 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,095 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_header_validate_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,097 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_reject_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,099 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_pairwise_agreement.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,100 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_validate_correct_eddy.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,102 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,103 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_diameter.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,105 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_print_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-05-10T18:04:16,107 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_diameter.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,109 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,111 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_score_many_bundles_one_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,113 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_rish.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,115 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_reorder_rois.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,117 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_stats_in_labels.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,119 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compute_TODI.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,120 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_tractogram_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,122 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_reorder_philips.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,124 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,126 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,128 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft_maps_edit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,130 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,132 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,134 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,135 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_remove_invalid.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,137 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,139 copying build/lib.linux-armv7l-cpython-39/scripts/scil_search_keywords.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,142 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,144 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_filter.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,146 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,148 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_tractogram_seeds.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,150 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,152 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,154 copying build/lib.linux-armv7l-cpython-39/scripts/scil_get_version.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,156 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,158 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_resample.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,160 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_dpp_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,162 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_smooth.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,163 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_one_bundle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,166 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_maps_ihMT.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,168 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,170 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bingham_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,172 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_fix_trk.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,174 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,176 copying build/lib.linux-armv7l-cpython-39/scripts/scil_freewater_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,177 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_roi.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,180 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,182 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_remove.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,184 copying build/lib.linux-armv7l-cpython-39/scripts/scil_stats_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,186 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,188 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_validate_correct.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,190 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_round_bvals.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,195 creating build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,196 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,198 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_json_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,199 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_fdf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,201 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_qbx.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,203 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reorder_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,204 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,206 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_crop_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,207 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_perform_majority_vote.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,209 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_decompose_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,211 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_plot_mean_std_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,212 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,214 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,216 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_histogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,217 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_asym_odf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,219 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_smooth_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,221 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,222 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ihMT_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,224 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,226 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,227 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_sh_basis.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,229 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,230 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,232 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,233 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_pft.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,235 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,237 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_divide.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,238 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,240 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_assign_uniform_color_to_tractograms.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,242 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_fix_dsi_studio_trk.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,243 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_execute_asymmetric_filtering.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,245 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_print_header.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,247 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_sh_from_signal.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,248 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,250 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_memsmt_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,251 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,253 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,255 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_streamlines_length_stats.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,256 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_uniformize_streamlines_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,258 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_streamlines_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,260 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_combine_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,262 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_generate_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,263 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_bids.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,265 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_streamlines_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,267 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_msmt_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,268 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,270 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_score_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,272 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_rish_from_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,274 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,275 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_rgb.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,277 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_streamlines_by_length.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,279 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,280 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_outlier_rejection.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,282 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_image.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,284 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_shuffle_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,285 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ssst_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,287 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_invalid_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,289 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_score_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,290 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_analyse_lesions_load.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,292 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_detect_dwi_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,294 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,295 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bundles_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,297 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reorder_dwi_philips.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,299 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,300 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_normalize_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,302 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_dwi_shell.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,304 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,305 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_set_response_function.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,307 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_individual_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,308 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,310 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_mean_std_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,312 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_run_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,313 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,315 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,317 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,319 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_MT_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,320 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_volume_by_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,322 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,324 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,325 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_fit_bingham_to_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,327 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,329 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,330 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_kurtosis_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,332 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_memsmt_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,334 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,336 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compress_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,338 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,339 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,341 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_local_tracking_dev.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,343 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,344 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_generate_priors_from_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,346 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,348 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_tractogram_anatomically.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,349 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,351 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_concatenate_dwi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,353 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,354 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,356 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_recognize_single_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,358 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,360 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_swap_gradient_axis.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,361 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,363 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,365 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,366 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ssst_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,368 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_sf_from_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,370 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_recognize_multi_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,371 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,374 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_local_tracking.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,375 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_NODDI.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,377 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_and_correct_eddy_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,378 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_save_connections_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,380 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,382 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_detect_streamlines_loops.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,383 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_msmt_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,385 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_snr_in_roi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,387 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,390 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_streamlines_math.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,392 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,393 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_and_correct_bvecs.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,395 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_seeds.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,397 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_bvecs.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,398 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_run_commit.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,400 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,402 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_todi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,403 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,405 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/__init__.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,407 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_freewater.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,408 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_add_tracking_mask_to_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,410 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_image_math.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,412 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_voxel_label_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,413 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,415 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_image.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,417 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,418 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,420 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_verify_space_attributes_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,422 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_dti.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,423 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_assign_custom_color_to_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,425 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,426 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,428 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_merge_json.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,430 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_bias_field_on_dwi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,432 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_estimate_bundles_diameter.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,433 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,435 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_print_connectivity_filenames.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,437 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,439 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,440 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,442 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,443 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,445 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,447 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,448 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_smooth_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,450 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_bvals.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,452 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_metrics_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,453 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_dilate_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,455 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,456 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,458 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_register_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,460 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_merge_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,461 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_seed_by_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,463 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,465 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,467 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,468 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,470 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,472 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compare_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,474 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_harmonize_json.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,475 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_volume_mosaic_overlap.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-05-10T18:04:16,477 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,479 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts 2024-05-10T18:04:16,481 running install_data 2024-05-10T18:04:16,516 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data 2024-05-10T18:04:16,516 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data 2024-05-10T18:04:16,518 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data/data 2024-05-10T18:04:16,518 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data/data/LUT 2024-05-10T18:04:16,521 copying data/LUT/freesurfer_desikan_killiany.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data/data/LUT 2024-05-10T18:04:16,523 copying data/LUT/freesurfer_subcortical.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data/data/LUT 2024-05-10T18:04:16,526 copying data/LUT/dk_aggregate_structures.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.2.data/data/data/LUT 2024-05-10T18:04:16,527 running install_egg_info 2024-05-10T18:04:16,565 Copying scilpy.egg-info to build/bdist.linux-armv7l/wheel/scilpy-2.0.2-py3.9.egg-info 2024-05-10T18:04:16,578 running install_scripts 2024-05-10T18:04:16,617 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2024-05-10T18:04:16,621 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.2.dist-info/WHEEL 2024-05-10T18:04:16,623 creating '/tmp/pip-wheel-abn_kmoa/scilpy-2.0.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-10T18:04:16,626 adding 'scilpy/__init__.py' 2024-05-10T18:04:16,627 adding 'scilpy/version.py' 2024-05-10T18:04:16,629 adding 'scilpy/connectivity/__init__.py' 2024-05-10T18:04:16,630 adding 'scilpy/connectivity/connectivity_tools.py' 2024-05-10T18:04:16,632 adding 'scilpy/denoise/__init__.py' 2024-05-10T18:04:16,635 adding 'scilpy/denoise/asym_filtering.py' 2024-05-10T18:04:16,637 adding 'scilpy/dwi/__init__.py' 2024-05-10T18:04:16,639 adding 'scilpy/dwi/operations.py' 2024-05-10T18:04:16,641 adding 'scilpy/dwi/utils.py' 2024-05-10T18:04:16,642 adding 'scilpy/dwi/tests/__init__.py' 2024-05-10T18:04:16,643 adding 'scilpy/dwi/tests/test_operations.py' 2024-05-10T18:04:16,645 adding 'scilpy/dwi/tests/test_utils.py' 2024-05-10T18:04:16,646 adding 'scilpy/gpuparallel/__init__.py' 2024-05-10T18:04:16,648 adding 'scilpy/gpuparallel/opencl_utils.py' 2024-05-10T18:04:16,650 adding 'scilpy/gradients/__init__.py' 2024-05-10T18:04:16,652 adding 'scilpy/gradients/bvec_bval_tools.py' 2024-05-10T18:04:16,653 adding 'scilpy/gradients/gen_gradient_sampling.py' 2024-05-10T18:04:16,655 adding 'scilpy/gradients/optimize_gradient_sampling.py' 2024-05-10T18:04:16,657 adding 'scilpy/gradients/utils.py' 2024-05-10T18:04:16,659 adding 'scilpy/image/__init__.py' 2024-05-10T18:04:16,661 adding 'scilpy/image/labels.py' 2024-05-10T18:04:16,662 adding 'scilpy/image/reslice.py' 2024-05-10T18:04:16,664 adding 'scilpy/image/utils.py' 2024-05-10T18:04:16,665 adding 'scilpy/image/volume_b0_synthesis.py' 2024-05-10T18:04:16,668 adding 'scilpy/image/volume_math.py' 2024-05-10T18:04:16,672 adding 'scilpy/image/volume_operations.py' 2024-05-10T18:04:16,673 adding 'scilpy/image/volume_space_management.py' 2024-05-10T18:04:16,675 adding 'scilpy/image/tests/__init__.py' 2024-05-10T18:04:16,677 adding 'scilpy/image/tests/test_labels.py' 2024-05-10T18:04:16,679 adding 'scilpy/image/tests/test_volume_math.py' 2024-05-10T18:04:16,681 adding 'scilpy/image/tests/test_volume_operations.py' 2024-05-10T18:04:16,683 adding 'scilpy/io/__init__.py' 2024-05-10T18:04:16,684 adding 'scilpy/io/btensor.py' 2024-05-10T18:04:16,686 adding 'scilpy/io/deprecator.py' 2024-05-10T18:04:16,687 adding 'scilpy/io/dvc.py' 2024-05-10T18:04:16,689 adding 'scilpy/io/fetcher.py' 2024-05-10T18:04:16,690 adding 'scilpy/io/gradients.py' 2024-05-10T18:04:16,692 adding 'scilpy/io/hdf5.py' 2024-05-10T18:04:16,694 adding 'scilpy/io/image.py' 2024-05-10T18:04:16,695 adding 'scilpy/io/mti.py' 2024-05-10T18:04:16,697 adding 'scilpy/io/streamlines.py' 2024-05-10T18:04:16,699 adding 'scilpy/io/tensor.py' 2024-05-10T18:04:16,703 adding 'scilpy/io/utils.py' 2024-05-10T18:04:16,706 adding 'scilpy/io/varian_fdf.py' 2024-05-10T18:04:16,708 adding 'scilpy/preprocessing/__init__.py' 2024-05-10T18:04:16,709 adding 'scilpy/preprocessing/distortion_correction.py' 2024-05-10T18:04:16,711 adding 'scilpy/reconst/__init__.py' 2024-05-10T18:04:16,712 adding 'scilpy/reconst/aodf.py' 2024-05-10T18:04:16,714 adding 'scilpy/reconst/bingham.py' 2024-05-10T18:04:16,716 adding 'scilpy/reconst/divide.py' 2024-05-10T18:04:16,718 adding 'scilpy/reconst/fiber_coherence.py' 2024-05-10T18:04:16,720 adding 'scilpy/reconst/fodf.py' 2024-05-10T18:04:16,722 adding 'scilpy/reconst/frf.py' 2024-05-10T18:04:16,724 adding 'scilpy/reconst/mti.py' 2024-05-10T18:04:16,727 adding 'scilpy/reconst/sh.py' 2024-05-10T18:04:16,729 adding 'scilpy/reconst/utils.py' 2024-05-10T18:04:16,730 adding 'scilpy/segment/__init__.py' 2024-05-10T18:04:16,731 adding 'scilpy/segment/models.py' 2024-05-10T18:04:16,733 adding 'scilpy/segment/recobundlesx.py' 2024-05-10T18:04:16,735 adding 'scilpy/segment/streamlines.py' 2024-05-10T18:04:16,738 adding 'scilpy/segment/tractogram_from_roi.py' 2024-05-10T18:04:16,741 adding 'scilpy/segment/voting_scheme.py' 2024-05-10T18:04:16,742 adding 'scilpy/stats/__init__.py' 2024-05-10T18:04:16,744 adding 'scilpy/stats/matrix_stats.py' 2024-05-10T18:04:16,746 adding 'scilpy/stats/stats.py' 2024-05-10T18:04:16,748 adding 'scilpy/stats/utils.py' 2024-05-10T18:04:16,750 adding 'scilpy/tracking/__init__.py' 2024-05-10T18:04:16,753 adding 'scilpy/tracking/propagator.py' 2024-05-10T18:04:16,755 adding 'scilpy/tracking/seed.py' 2024-05-10T18:04:16,758 adding 'scilpy/tracking/tracker.py' 2024-05-10T18:04:16,761 adding 'scilpy/tracking/utils.py' 2024-05-10T18:04:16,762 adding 'scilpy/tractanalysis/__init__.py' 2024-05-10T18:04:16,764 adding 'scilpy/tractanalysis/afd_along_streamlines.py' 2024-05-10T18:04:16,766 adding 'scilpy/tractanalysis/bingham_metric_along_streamlines.py' 2024-05-10T18:04:16,768 adding 'scilpy/tractanalysis/bundle_operations.py' 2024-05-10T18:04:16,770 adding 'scilpy/tractanalysis/distance_to_centroid.py' 2024-05-10T18:04:16,973 adding 'scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so' 2024-05-10T18:04:16,981 adding 'scilpy/tractanalysis/grid_intersections.pyx' 2024-05-10T18:04:16,982 adding 'scilpy/tractanalysis/json_utils.py' 2024-05-10T18:04:17,169 adding 'scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so' 2024-05-10T18:04:17,176 adding 'scilpy/tractanalysis/quick_tools.pyx' 2024-05-10T18:04:17,179 adding 'scilpy/tractanalysis/reproducibility_measures.py' 2024-05-10T18:04:17,181 adding 'scilpy/tractanalysis/scoring.py' 2024-05-10T18:04:17,389 adding 'scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so' 2024-05-10T18:04:17,398 adding 'scilpy/tractanalysis/streamlines_metrics.pyx' 2024-05-10T18:04:17,400 adding 'scilpy/tractanalysis/todi.py' 2024-05-10T18:04:17,402 adding 'scilpy/tractanalysis/todi_util.py' 2024-05-10T18:04:17,403 adding 'scilpy/tractanalysis/tools.py' 2024-05-10T18:04:17,405 adding 'scilpy/tractograms/__init__.py' 2024-05-10T18:04:17,407 adding 'scilpy/tractograms/dps_and_dpp_management.py' 2024-05-10T18:04:17,409 adding 'scilpy/tractograms/lazy_tractogram_operations.py' 2024-05-10T18:04:17,411 adding 'scilpy/tractograms/streamline_and_mask_operations.py' 2024-05-10T18:04:17,414 adding 'scilpy/tractograms/streamline_operations.py' 2024-05-10T18:04:17,419 adding 'scilpy/tractograms/tractogram_operations.py' 2024-05-10T18:04:17,626 adding 'scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so' 2024-05-10T18:04:17,634 adding 'scilpy/tractograms/uncompress.pyx' 2024-05-10T18:04:17,636 adding 'scilpy/tractograms/tests/__init__.py' 2024-05-10T18:04:17,637 adding 'scilpy/tractograms/tests/test_dps_and_dpp_management.py' 2024-05-10T18:04:17,639 adding 'scilpy/tractograms/tests/test_streamline_and_mask_operations.py' 2024-05-10T18:04:17,641 adding 'scilpy/tractograms/tests/test_streamline_operations.py' 2024-05-10T18:04:17,643 adding 'scilpy/tractograms/tests/test_tractogram_operations.py' 2024-05-10T18:04:17,644 adding 'scilpy/utils/__init__.py' 2024-05-10T18:04:17,646 adding 'scilpy/utils/filenames.py' 2024-05-10T18:04:17,648 adding 'scilpy/utils/metrics_tools.py' 2024-05-10T18:04:17,649 adding 'scilpy/utils/spatial.py' 2024-05-10T18:04:17,651 adding 'scilpy/viz/__init__.py' 2024-05-10T18:04:17,653 adding 'scilpy/viz/color.py' 2024-05-10T18:04:17,654 adding 'scilpy/viz/gradients.py' 2024-05-10T18:04:17,656 adding 'scilpy/viz/screenshot.py' 2024-05-10T18:04:17,658 adding 'scilpy/viz/slice.py' 2024-05-10T18:04:17,659 adding 'scilpy/viz/utils.py' 2024-05-10T18:04:17,661 adding 'scilpy/viz/backends/__init__.py' 2024-05-10T18:04:17,663 adding 'scilpy/viz/backends/fury.py' 2024-05-10T18:04:17,665 adding 'scilpy/viz/backends/pil.py' 2024-05-10T18:04:17,667 adding 'scilpy/viz/backends/vtk.py' 2024-05-10T18:04:17,669 adding 'scilpy/viz/legacy/__init__.py' 2024-05-10T18:04:17,670 adding 'scilpy/viz/legacy/chord_chart.py' 2024-05-10T18:04:17,673 adding 'scilpy-2.0.2.data/data/data/LUT/dk_aggregate_structures.json' 2024-05-10T18:04:17,674 adding 'scilpy-2.0.2.data/data/data/LUT/freesurfer_desikan_killiany.json' 2024-05-10T18:04:17,676 adding 'scilpy-2.0.2.data/data/data/LUT/freesurfer_subcortical.json' 2024-05-10T18:04:17,681 adding 'scripts/__init__.py' 2024-05-10T18:04:17,683 adding 'scripts/scil_NODDI_maps.py' 2024-05-10T18:04:17,684 adding 'scripts/scil_NODDI_priors.py' 2024-05-10T18:04:17,686 adding 'scripts/scil_aodf_metrics.py' 2024-05-10T18:04:17,689 adding 'scripts/scil_bids_validate.py' 2024-05-10T18:04:17,690 adding 'scripts/scil_bingham_metrics.py' 2024-05-10T18:04:17,692 adding 'scripts/scil_btensor_metrics.py' 2024-05-10T18:04:17,694 adding 'scripts/scil_bundle_clean_qbx_clusters.py' 2024-05-10T18:04:17,695 adding 'scripts/scil_bundle_compute_centroid.py' 2024-05-10T18:04:17,697 adding 'scripts/scil_bundle_compute_endpoints_map.py' 2024-05-10T18:04:17,699 adding 'scripts/scil_bundle_diameter.py' 2024-05-10T18:04:17,701 adding 'scripts/scil_bundle_filter_by_occurence.py' 2024-05-10T18:04:17,702 adding 'scripts/scil_bundle_generate_priors.py' 2024-05-10T18:04:17,704 adding 'scripts/scil_bundle_label_map.py' 2024-05-10T18:04:17,706 adding 'scripts/scil_bundle_mean_fixel_afd.py' 2024-05-10T18:04:17,707 adding 'scripts/scil_bundle_mean_fixel_afd_from_hdf5.py' 2024-05-10T18:04:17,709 adding 'scripts/scil_bundle_mean_fixel_bingham_metric.py' 2024-05-10T18:04:17,710 adding 'scripts/scil_bundle_mean_std.py' 2024-05-10T18:04:17,712 adding 'scripts/scil_bundle_pairwise_comparison.py' 2024-05-10T18:04:17,714 adding 'scripts/scil_bundle_reject_outliers.py' 2024-05-10T18:04:17,716 adding 'scripts/scil_bundle_score_many_bundles_one_tractogram.py' 2024-05-10T18:04:17,717 adding 'scripts/scil_bundle_score_same_bundle_many_segmentations.py' 2024-05-10T18:04:17,719 adding 'scripts/scil_bundle_shape_measures.py' 2024-05-10T18:04:17,721 adding 'scripts/scil_bundle_uniformize_endpoints.py' 2024-05-10T18:04:17,723 adding 'scripts/scil_bundle_volume_per_label.py' 2024-05-10T18:04:17,724 adding 'scripts/scil_connectivity_compare_populations.py' 2024-05-10T18:04:17,727 adding 'scripts/scil_connectivity_compute_matrices.py' 2024-05-10T18:04:17,729 adding 'scripts/scil_connectivity_compute_pca.py' 2024-05-10T18:04:17,731 adding 'scripts/scil_connectivity_filter.py' 2024-05-10T18:04:17,732 adding 'scripts/scil_connectivity_graph_measures.py' 2024-05-10T18:04:17,734 adding 'scripts/scil_connectivity_hdf5_average_density_map.py' 2024-05-10T18:04:17,735 adding 'scripts/scil_connectivity_math.py' 2024-05-10T18:04:17,737 adding 'scripts/scil_connectivity_normalize.py' 2024-05-10T18:04:17,738 adding 'scripts/scil_connectivity_pairwise_agreement.py' 2024-05-10T18:04:17,740 adding 'scripts/scil_connectivity_print_filenames.py' 2024-05-10T18:04:17,741 adding 'scripts/scil_connectivity_reorder_rois.py' 2024-05-10T18:04:17,743 adding 'scripts/scil_denoising_nlmeans.py' 2024-05-10T18:04:17,744 adding 'scripts/scil_dki_metrics.py' 2024-05-10T18:04:17,746 adding 'scripts/scil_dti_convert_tensors.py' 2024-05-10T18:04:17,748 adding 'scripts/scil_dti_metrics.py' 2024-05-10T18:04:17,750 adding 'scripts/scil_dwi_apply_bias_field.py' 2024-05-10T18:04:17,751 adding 'scripts/scil_dwi_compute_snr.py' 2024-05-10T18:04:17,753 adding 'scripts/scil_dwi_concatenate.py' 2024-05-10T18:04:17,754 adding 'scripts/scil_dwi_convert_FDF.py' 2024-05-10T18:04:17,756 adding 'scripts/scil_dwi_detect_volume_outliers.py' 2024-05-10T18:04:17,757 adding 'scripts/scil_dwi_extract_b0.py' 2024-05-10T18:04:17,758 adding 'scripts/scil_dwi_extract_shell.py' 2024-05-10T18:04:17,760 adding 'scripts/scil_dwi_powder_average.py' 2024-05-10T18:04:17,762 adding 'scripts/scil_dwi_prepare_eddy_command.py' 2024-05-10T18:04:17,763 adding 'scripts/scil_dwi_prepare_topup_command.py' 2024-05-10T18:04:17,765 adding 'scripts/scil_dwi_reorder_philips.py' 2024-05-10T18:04:17,766 adding 'scripts/scil_dwi_split_by_indices.py' 2024-05-10T18:04:17,768 adding 'scripts/scil_dwi_to_sh.py' 2024-05-10T18:04:17,770 adding 'scripts/scil_fodf_max_in_ventricles.py' 2024-05-10T18:04:17,771 adding 'scripts/scil_fodf_memsmt.py' 2024-05-10T18:04:17,773 adding 'scripts/scil_fodf_metrics.py' 2024-05-10T18:04:17,775 adding 'scripts/scil_fodf_msmt.py' 2024-05-10T18:04:17,777 adding 'scripts/scil_fodf_ssst.py' 2024-05-10T18:04:17,778 adding 'scripts/scil_fodf_to_bingham.py' 2024-05-10T18:04:17,780 adding 'scripts/scil_freewater_maps.py' 2024-05-10T18:04:17,781 adding 'scripts/scil_freewater_priors.py' 2024-05-10T18:04:17,782 adding 'scripts/scil_frf_mean.py' 2024-05-10T18:04:17,784 adding 'scripts/scil_frf_memsmt.py' 2024-05-10T18:04:17,786 adding 'scripts/scil_frf_msmt.py' 2024-05-10T18:04:17,787 adding 'scripts/scil_frf_set_diffusivities.py' 2024-05-10T18:04:17,789 adding 'scripts/scil_frf_ssst.py' 2024-05-10T18:04:17,790 adding 'scripts/scil_get_version.py' 2024-05-10T18:04:17,791 adding 'scripts/scil_gradients_apply_transform.py' 2024-05-10T18:04:17,793 adding 'scripts/scil_gradients_convert.py' 2024-05-10T18:04:17,794 adding 'scripts/scil_gradients_generate_sampling.py' 2024-05-10T18:04:17,796 adding 'scripts/scil_gradients_modify_axes.py' 2024-05-10T18:04:17,798 adding 'scripts/scil_gradients_round_bvals.py' 2024-05-10T18:04:17,799 adding 'scripts/scil_gradients_validate_correct.py' 2024-05-10T18:04:17,800 adding 'scripts/scil_gradients_validate_correct_eddy.py' 2024-05-10T18:04:17,802 adding 'scripts/scil_header_print_info.py' 2024-05-10T18:04:17,803 adding 'scripts/scil_header_validate_compatibility.py' 2024-05-10T18:04:17,805 adding 'scripts/scil_json_convert_entries_to_xlsx.py' 2024-05-10T18:04:17,806 adding 'scripts/scil_json_harmonize_entries.py' 2024-05-10T18:04:17,808 adding 'scripts/scil_json_merge_entries.py' 2024-05-10T18:04:17,809 adding 'scripts/scil_labels_combine.py' 2024-05-10T18:04:17,811 adding 'scripts/scil_labels_dilate.py' 2024-05-10T18:04:17,812 adding 'scripts/scil_labels_remove.py' 2024-05-10T18:04:17,814 adding 'scripts/scil_labels_split_volume_by_ids.py' 2024-05-10T18:04:17,815 adding 'scripts/scil_labels_split_volume_from_lut.py' 2024-05-10T18:04:17,817 adding 'scripts/scil_lesions_info.py' 2024-05-10T18:04:17,818 adding 'scripts/scil_mti_adjust_B1_header.py' 2024-05-10T18:04:17,820 adding 'scripts/scil_mti_maps_MT.py' 2024-05-10T18:04:17,822 adding 'scripts/scil_mti_maps_ihMT.py' 2024-05-10T18:04:17,824 adding 'scripts/scil_plot_stats_per_point.py' 2024-05-10T18:04:17,825 adding 'scripts/scil_qball_metrics.py' 2024-05-10T18:04:17,827 adding 'scripts/scil_rgb_convert.py' 2024-05-10T18:04:17,828 adding 'scripts/scil_search_keywords.py' 2024-05-10T18:04:17,830 adding 'scripts/scil_sh_convert.py' 2024-05-10T18:04:17,831 adding 'scripts/scil_sh_fusion.py' 2024-05-10T18:04:17,833 adding 'scripts/scil_sh_to_aodf.py' 2024-05-10T18:04:17,834 adding 'scripts/scil_sh_to_rish.py' 2024-05-10T18:04:17,836 adding 'scripts/scil_sh_to_sf.py' 2024-05-10T18:04:17,838 adding 'scripts/scil_stats_group_comparison.py' 2024-05-10T18:04:17,839 adding 'scripts/scil_surface_apply_transform.py' 2024-05-10T18:04:17,840 adding 'scripts/scil_surface_convert.py' 2024-05-10T18:04:17,842 adding 'scripts/scil_surface_flip.py' 2024-05-10T18:04:17,843 adding 'scripts/scil_surface_smooth.py' 2024-05-10T18:04:17,845 adding 'scripts/scil_tracking_local.py' 2024-05-10T18:04:17,847 adding 'scripts/scil_tracking_local_dev.py' 2024-05-10T18:04:17,849 adding 'scripts/scil_tracking_pft.py' 2024-05-10T18:04:17,851 adding 'scripts/scil_tracking_pft_maps.py' 2024-05-10T18:04:17,852 adding 'scripts/scil_tracking_pft_maps_edit.py' 2024-05-10T18:04:17,854 adding 'scripts/scil_tractogram_apply_transform.py' 2024-05-10T18:04:17,855 adding 'scripts/scil_tractogram_apply_transform_to_hdf5.py' 2024-05-10T18:04:17,857 adding 'scripts/scil_tractogram_assign_custom_color.py' 2024-05-10T18:04:17,859 adding 'scripts/scil_tractogram_assign_uniform_color.py' 2024-05-10T18:04:17,862 adding 'scripts/scil_tractogram_commit.py' 2024-05-10T18:04:17,863 adding 'scripts/scil_tractogram_compress.py' 2024-05-10T18:04:17,865 adding 'scripts/scil_tractogram_compute_TODI.py' 2024-05-10T18:04:17,866 adding 'scripts/scil_tractogram_compute_density_map.py' 2024-05-10T18:04:17,868 adding 'scripts/scil_tractogram_convert.py' 2024-05-10T18:04:17,869 adding 'scripts/scil_tractogram_convert_hdf5_to_trk.py' 2024-05-10T18:04:17,870 adding 'scripts/scil_tractogram_count_streamlines.py' 2024-05-10T18:04:17,872 adding 'scripts/scil_tractogram_cut_streamlines.py' 2024-05-10T18:04:17,874 adding 'scripts/scil_tractogram_detect_loops.py' 2024-05-10T18:04:17,876 adding 'scripts/scil_tractogram_dpp_math.py' 2024-05-10T18:04:17,877 adding 'scripts/scil_tractogram_extract_ushape.py' 2024-05-10T18:04:17,879 adding 'scripts/scil_tractogram_filter_by_anatomy.py' 2024-05-10T18:04:17,881 adding 'scripts/scil_tractogram_filter_by_length.py' 2024-05-10T18:04:17,882 adding 'scripts/scil_tractogram_filter_by_orientation.py' 2024-05-10T18:04:17,884 adding 'scripts/scil_tractogram_filter_by_roi.py' 2024-05-10T18:04:17,886 adding 'scripts/scil_tractogram_fix_trk.py' 2024-05-10T18:04:17,888 adding 'scripts/scil_tractogram_flip.py' 2024-05-10T18:04:17,889 adding 'scripts/scil_tractogram_math.py' 2024-05-10T18:04:17,891 adding 'scripts/scil_tractogram_pairwise_comparison.py' 2024-05-10T18:04:17,892 adding 'scripts/scil_tractogram_print_info.py' 2024-05-10T18:04:17,894 adding 'scripts/scil_tractogram_project_map_to_streamlines.py' 2024-05-10T18:04:17,896 adding 'scripts/scil_tractogram_project_streamlines_to_map.py' 2024-05-10T18:04:17,897 adding 'scripts/scil_tractogram_qbx.py' 2024-05-10T18:04:17,898 adding 'scripts/scil_tractogram_register.py' 2024-05-10T18:04:17,900 adding 'scripts/scil_tractogram_remove_invalid.py' 2024-05-10T18:04:17,901 adding 'scripts/scil_tractogram_resample.py' 2024-05-10T18:04:17,903 adding 'scripts/scil_tractogram_resample_nb_points.py' 2024-05-10T18:04:17,904 adding 'scripts/scil_tractogram_seed_density_map.py' 2024-05-10T18:04:17,907 adding 'scripts/scil_tractogram_segment_and_score.py' 2024-05-10T18:04:17,908 adding 'scripts/scil_tractogram_segment_bundles.py' 2024-05-10T18:04:17,911 adding 'scripts/scil_tractogram_segment_bundles_for_connectivity.py' 2024-05-10T18:04:17,912 adding 'scripts/scil_tractogram_segment_one_bundle.py' 2024-05-10T18:04:17,914 adding 'scripts/scil_tractogram_shuffle.py' 2024-05-10T18:04:17,915 adding 'scripts/scil_tractogram_smooth.py' 2024-05-10T18:04:17,917 adding 'scripts/scil_tractogram_split.py' 2024-05-10T18:04:17,918 adding 'scripts/scil_viz_bingham_fit.py' 2024-05-10T18:04:17,920 adding 'scripts/scil_viz_bundle.py' 2024-05-10T18:04:17,922 adding 'scripts/scil_viz_bundle_screenshot_mni.py' 2024-05-10T18:04:17,924 adding 'scripts/scil_viz_bundle_screenshot_mosaic.py' 2024-05-10T18:04:17,926 adding 'scripts/scil_viz_connectivity.py' 2024-05-10T18:04:17,928 adding 'scripts/scil_viz_dti_screenshot.py' 2024-05-10T18:04:17,930 adding 'scripts/scil_viz_fodf.py' 2024-05-10T18:04:17,932 adding 'scripts/scil_viz_gradients_screenshot.py' 2024-05-10T18:04:17,934 adding 'scripts/scil_viz_tractogram_seeds.py' 2024-05-10T18:04:17,935 adding 'scripts/scil_viz_tractogram_seeds_3d.py' 2024-05-10T18:04:17,936 adding 'scripts/scil_viz_volume_histogram.py' 2024-05-10T18:04:17,938 adding 'scripts/scil_viz_volume_scatterplot.py' 2024-05-10T18:04:17,940 adding 'scripts/scil_viz_volume_screenshot.py' 2024-05-10T18:04:17,942 adding 'scripts/scil_viz_volume_screenshot_mosaic.py' 2024-05-10T18:04:17,943 adding 'scripts/scil_volume_apply_transform.py' 2024-05-10T18:04:17,944 adding 'scripts/scil_volume_b0_synthesis.py' 2024-05-10T18:04:17,946 adding 'scripts/scil_volume_count_non_zero_voxels.py' 2024-05-10T18:04:17,947 adding 'scripts/scil_volume_crop.py' 2024-05-10T18:04:17,948 adding 'scripts/scil_volume_flip.py' 2024-05-10T18:04:17,950 adding 'scripts/scil_volume_math.py' 2024-05-10T18:04:17,951 adding 'scripts/scil_volume_remove_outliers_ransac.py' 2024-05-10T18:04:17,953 adding 'scripts/scil_volume_resample.py' 2024-05-10T18:04:17,954 adding 'scripts/scil_volume_reshape_to_reference.py' 2024-05-10T18:04:17,956 adding 'scripts/scil_volume_stats_in_ROI.py' 2024-05-10T18:04:17,957 adding 'scripts/scil_volume_stats_in_labels.py' 2024-05-10T18:04:17,961 adding 'scripts/legacy/__init__.py' 2024-05-10T18:04:17,962 adding 'scripts/legacy/scil_add_tracking_mask_to_pft_maps.py' 2024-05-10T18:04:17,964 adding 'scripts/legacy/scil_analyse_lesions_load.py' 2024-05-10T18:04:17,965 adding 'scripts/legacy/scil_apply_bias_field_on_dwi.py' 2024-05-10T18:04:17,966 adding 'scripts/legacy/scil_apply_transform_to_bvecs.py' 2024-05-10T18:04:17,967 adding 'scripts/legacy/scil_apply_transform_to_hdf5.py' 2024-05-10T18:04:17,968 adding 'scripts/legacy/scil_apply_transform_to_image.py' 2024-05-10T18:04:17,970 adding 'scripts/legacy/scil_apply_transform_to_surface.py' 2024-05-10T18:04:17,971 adding 'scripts/legacy/scil_apply_transform_to_tractogram.py' 2024-05-10T18:04:17,972 adding 'scripts/legacy/scil_assign_custom_color_to_tractogram.py' 2024-05-10T18:04:17,973 adding 'scripts/legacy/scil_assign_uniform_color_to_tractograms.py' 2024-05-10T18:04:17,974 adding 'scripts/legacy/scil_clean_qbx_clusters.py' 2024-05-10T18:04:17,976 adding 'scripts/legacy/scil_combine_labels.py' 2024-05-10T18:04:17,977 adding 'scripts/legacy/scil_compare_connectivity.py' 2024-05-10T18:04:17,978 adding 'scripts/legacy/scil_compress_streamlines.py' 2024-05-10T18:04:17,979 adding 'scripts/legacy/scil_compute_MT_maps.py' 2024-05-10T18:04:17,980 adding 'scripts/legacy/scil_compute_NODDI.py' 2024-05-10T18:04:17,981 adding 'scripts/legacy/scil_compute_NODDI_priors.py' 2024-05-10T18:04:17,983 adding 'scripts/legacy/scil_compute_asym_odf_metrics.py' 2024-05-10T18:04:17,984 adding 'scripts/legacy/scil_compute_bundle_mean_std.py' 2024-05-10T18:04:17,985 adding 'scripts/legacy/scil_compute_bundle_mean_std_per_point.py' 2024-05-10T18:04:17,986 adding 'scripts/legacy/scil_compute_bundle_volume.py' 2024-05-10T18:04:17,987 adding 'scripts/legacy/scil_compute_bundle_volume_per_label.py' 2024-05-10T18:04:17,989 adding 'scripts/legacy/scil_compute_bundle_voxel_label_map.py' 2024-05-10T18:04:17,990 adding 'scripts/legacy/scil_compute_centroid.py' 2024-05-10T18:04:17,991 adding 'scripts/legacy/scil_compute_connectivity.py' 2024-05-10T18:04:17,992 adding 'scripts/legacy/scil_compute_divide.py' 2024-05-10T18:04:17,993 adding 'scripts/legacy/scil_compute_dti_metrics.py' 2024-05-10T18:04:17,994 adding 'scripts/legacy/scil_compute_endpoints_map.py' 2024-05-10T18:04:17,996 adding 'scripts/legacy/scil_compute_fodf_max_in_ventricles.py' 2024-05-10T18:04:17,997 adding 'scripts/legacy/scil_compute_fodf_metrics.py' 2024-05-10T18:04:17,998 adding 'scripts/legacy/scil_compute_freewater.py' 2024-05-10T18:04:17,999 adding 'scripts/legacy/scil_compute_hdf5_average_density_map.py' 2024-05-10T18:04:18,000 adding 'scripts/legacy/scil_compute_ihMT_maps.py' 2024-05-10T18:04:18,001 adding 'scripts/legacy/scil_compute_kurtosis_metrics.py' 2024-05-10T18:04:18,003 adding 'scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py' 2024-05-10T18:04:18,004 adding 'scripts/legacy/scil_compute_local_tracking.py' 2024-05-10T18:04:18,005 adding 'scripts/legacy/scil_compute_local_tracking_dev.py' 2024-05-10T18:04:18,006 adding 'scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py' 2024-05-10T18:04:18,007 adding 'scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py' 2024-05-10T18:04:18,009 adding 'scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py' 2024-05-10T18:04:18,010 adding 'scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py' 2024-05-10T18:04:18,011 adding 'scripts/legacy/scil_compute_mean_frf.py' 2024-05-10T18:04:18,012 adding 'scripts/legacy/scil_compute_memsmt_fodf.py' 2024-05-10T18:04:18,013 adding 'scripts/legacy/scil_compute_memsmt_frf.py' 2024-05-10T18:04:18,014 adding 'scripts/legacy/scil_compute_metrics_stats_in_ROI.py' 2024-05-10T18:04:18,016 adding 'scripts/legacy/scil_compute_msmt_fodf.py' 2024-05-10T18:04:18,017 adding 'scripts/legacy/scil_compute_msmt_frf.py' 2024-05-10T18:04:18,018 adding 'scripts/legacy/scil_compute_pca.py' 2024-05-10T18:04:18,019 adding 'scripts/legacy/scil_compute_pft.py' 2024-05-10T18:04:18,020 adding 'scripts/legacy/scil_compute_powder_average.py' 2024-05-10T18:04:18,022 adding 'scripts/legacy/scil_compute_qball_metrics.py' 2024-05-10T18:04:18,023 adding 'scripts/legacy/scil_compute_qbx.py' 2024-05-10T18:04:18,024 adding 'scripts/legacy/scil_compute_rish_from_sh.py' 2024-05-10T18:04:18,025 adding 'scripts/legacy/scil_compute_seed_by_labels.py' 2024-05-10T18:04:18,026 adding 'scripts/legacy/scil_compute_seed_density_map.py' 2024-05-10T18:04:18,027 adding 'scripts/legacy/scil_compute_sf_from_sh.py' 2024-05-10T18:04:18,029 adding 'scripts/legacy/scil_compute_sh_from_signal.py' 2024-05-10T18:04:18,030 adding 'scripts/legacy/scil_compute_ssst_fodf.py' 2024-05-10T18:04:18,031 adding 'scripts/legacy/scil_compute_ssst_frf.py' 2024-05-10T18:04:18,032 adding 'scripts/legacy/scil_compute_streamlines_density_map.py' 2024-05-10T18:04:18,033 adding 'scripts/legacy/scil_compute_streamlines_length_stats.py' 2024-05-10T18:04:18,034 adding 'scripts/legacy/scil_compute_todi.py' 2024-05-10T18:04:18,036 adding 'scripts/legacy/scil_concatenate_dwi.py' 2024-05-10T18:04:18,037 adding 'scripts/legacy/scil_convert_fdf.py' 2024-05-10T18:04:18,038 adding 'scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py' 2024-05-10T18:04:18,039 adding 'scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py' 2024-05-10T18:04:18,040 adding 'scripts/legacy/scil_convert_json_to_xlsx.py' 2024-05-10T18:04:18,041 adding 'scripts/legacy/scil_convert_rgb.py' 2024-05-10T18:04:18,043 adding 'scripts/legacy/scil_convert_sh_basis.py' 2024-05-10T18:04:18,044 adding 'scripts/legacy/scil_convert_surface.py' 2024-05-10T18:04:18,045 adding 'scripts/legacy/scil_convert_tensors.py' 2024-05-10T18:04:18,046 adding 'scripts/legacy/scil_convert_tractogram.py' 2024-05-10T18:04:18,047 adding 'scripts/legacy/scil_count_non_zero_voxels.py' 2024-05-10T18:04:18,049 adding 'scripts/legacy/scil_count_streamlines.py' 2024-05-10T18:04:18,050 adding 'scripts/legacy/scil_crop_volume.py' 2024-05-10T18:04:18,051 adding 'scripts/legacy/scil_cut_streamlines.py' 2024-05-10T18:04:18,052 adding 'scripts/legacy/scil_decompose_connectivity.py' 2024-05-10T18:04:18,053 adding 'scripts/legacy/scil_detect_dwi_volume_outliers.py' 2024-05-10T18:04:18,054 adding 'scripts/legacy/scil_detect_streamlines_loops.py' 2024-05-10T18:04:18,056 adding 'scripts/legacy/scil_dilate_labels.py' 2024-05-10T18:04:18,057 adding 'scripts/legacy/scil_estimate_bundles_diameter.py' 2024-05-10T18:04:18,058 adding 'scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py' 2024-05-10T18:04:18,059 adding 'scripts/legacy/scil_evaluate_bundles_individual_measures.py' 2024-05-10T18:04:18,060 adding 'scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py' 2024-05-10T18:04:18,062 adding 'scripts/legacy/scil_evaluate_connectivity_graph_measures.py' 2024-05-10T18:04:18,063 adding 'scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py' 2024-05-10T18:04:18,064 adding 'scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py' 2024-05-10T18:04:18,065 adding 'scripts/legacy/scil_execute_asymmetric_filtering.py' 2024-05-10T18:04:18,066 adding 'scripts/legacy/scil_extract_b0.py' 2024-05-10T18:04:18,067 adding 'scripts/legacy/scil_extract_dwi_shell.py' 2024-05-10T18:04:18,069 adding 'scripts/legacy/scil_extract_ushape.py' 2024-05-10T18:04:18,070 adding 'scripts/legacy/scil_filter_connectivity.py' 2024-05-10T18:04:18,071 adding 'scripts/legacy/scil_filter_streamlines_by_length.py' 2024-05-10T18:04:18,072 adding 'scripts/legacy/scil_filter_streamlines_by_orientation.py' 2024-05-10T18:04:18,073 adding 'scripts/legacy/scil_filter_tractogram.py' 2024-05-10T18:04:18,074 adding 'scripts/legacy/scil_filter_tractogram_anatomically.py' 2024-05-10T18:04:18,076 adding 'scripts/legacy/scil_fit_bingham_to_fodf.py' 2024-05-10T18:04:18,077 adding 'scripts/legacy/scil_fix_dsi_studio_trk.py' 2024-05-10T18:04:18,078 adding 'scripts/legacy/scil_flip_gradients.py' 2024-05-10T18:04:18,079 adding 'scripts/legacy/scil_flip_streamlines.py' 2024-05-10T18:04:18,080 adding 'scripts/legacy/scil_flip_surface.py' 2024-05-10T18:04:18,081 adding 'scripts/legacy/scil_flip_volume.py' 2024-05-10T18:04:18,083 adding 'scripts/legacy/scil_generate_gradient_sampling.py' 2024-05-10T18:04:18,084 adding 'scripts/legacy/scil_generate_priors_from_bundle.py' 2024-05-10T18:04:18,085 adding 'scripts/legacy/scil_group_comparison.py' 2024-05-10T18:04:18,086 adding 'scripts/legacy/scil_harmonize_json.py' 2024-05-10T18:04:18,087 adding 'scripts/legacy/scil_image_math.py' 2024-05-10T18:04:18,088 adding 'scripts/legacy/scil_merge_json.py' 2024-05-10T18:04:18,090 adding 'scripts/legacy/scil_merge_sh.py' 2024-05-10T18:04:18,091 adding 'scripts/legacy/scil_normalize_connectivity.py' 2024-05-10T18:04:18,092 adding 'scripts/legacy/scil_outlier_rejection.py' 2024-05-10T18:04:18,093 adding 'scripts/legacy/scil_perform_majority_vote.py' 2024-05-10T18:04:18,094 adding 'scripts/legacy/scil_plot_mean_std_per_point.py' 2024-05-10T18:04:18,095 adding 'scripts/legacy/scil_prepare_eddy_command.py' 2024-05-10T18:04:18,097 adding 'scripts/legacy/scil_prepare_topup_command.py' 2024-05-10T18:04:18,098 adding 'scripts/legacy/scil_print_connectivity_filenames.py' 2024-05-10T18:04:18,099 adding 'scripts/legacy/scil_print_header.py' 2024-05-10T18:04:18,100 adding 'scripts/legacy/scil_project_streamlines_to_map.py' 2024-05-10T18:04:18,101 adding 'scripts/legacy/scil_recognize_multi_bundles.py' 2024-05-10T18:04:18,103 adding 'scripts/legacy/scil_recognize_single_bundle.py' 2024-05-10T18:04:18,104 adding 'scripts/legacy/scil_register_tractogram.py' 2024-05-10T18:04:18,105 adding 'scripts/legacy/scil_remove_invalid_streamlines.py' 2024-05-10T18:04:18,106 adding 'scripts/legacy/scil_remove_labels.py' 2024-05-10T18:04:18,107 adding 'scripts/legacy/scil_remove_outliers_ransac.py' 2024-05-10T18:04:18,108 adding 'scripts/legacy/scil_reorder_connectivity.py' 2024-05-10T18:04:18,110 adding 'scripts/legacy/scil_reorder_dwi_philips.py' 2024-05-10T18:04:18,111 adding 'scripts/legacy/scil_resample_bvals.py' 2024-05-10T18:04:18,112 adding 'scripts/legacy/scil_resample_streamlines.py' 2024-05-10T18:04:18,113 adding 'scripts/legacy/scil_resample_tractogram.py' 2024-05-10T18:04:18,114 adding 'scripts/legacy/scil_resample_volume.py' 2024-05-10T18:04:18,115 adding 'scripts/legacy/scil_reshape_to_reference.py' 2024-05-10T18:04:18,117 adding 'scripts/legacy/scil_run_commit.py' 2024-05-10T18:04:18,118 adding 'scripts/legacy/scil_run_nlmeans.py' 2024-05-10T18:04:18,119 adding 'scripts/legacy/scil_save_connections_from_hdf5.py' 2024-05-10T18:04:18,120 adding 'scripts/legacy/scil_score_bundles.py' 2024-05-10T18:04:18,121 adding 'scripts/legacy/scil_score_tractogram.py' 2024-05-10T18:04:18,122 adding 'scripts/legacy/scil_screenshot_bundle.py' 2024-05-10T18:04:18,124 adding 'scripts/legacy/scil_screenshot_dti.py' 2024-05-10T18:04:18,125 adding 'scripts/legacy/scil_screenshot_volume.py' 2024-05-10T18:04:18,126 adding 'scripts/legacy/scil_screenshot_volume_mosaic_overlap.py' 2024-05-10T18:04:18,127 adding 'scripts/legacy/scil_set_response_function.py' 2024-05-10T18:04:18,128 adding 'scripts/legacy/scil_shuffle_streamlines.py' 2024-05-10T18:04:18,129 adding 'scripts/legacy/scil_smooth_streamlines.py' 2024-05-10T18:04:18,131 adding 'scripts/legacy/scil_smooth_surface.py' 2024-05-10T18:04:18,132 adding 'scripts/legacy/scil_snr_in_roi.py' 2024-05-10T18:04:18,133 adding 'scripts/legacy/scil_split_image.py' 2024-05-10T18:04:18,134 adding 'scripts/legacy/scil_split_tractogram.py' 2024-05-10T18:04:18,135 adding 'scripts/legacy/scil_split_volume_by_ids.py' 2024-05-10T18:04:18,137 adding 'scripts/legacy/scil_split_volume_by_labels.py' 2024-05-10T18:04:18,138 adding 'scripts/legacy/scil_streamlines_math.py' 2024-05-10T18:04:18,139 adding 'scripts/legacy/scil_swap_gradient_axis.py' 2024-05-10T18:04:18,140 adding 'scripts/legacy/scil_uniformize_streamlines_endpoints.py' 2024-05-10T18:04:18,141 adding 'scripts/legacy/scil_validate_and_correct_bvecs.py' 2024-05-10T18:04:18,142 adding 'scripts/legacy/scil_validate_and_correct_eddy_gradients.py' 2024-05-10T18:04:18,144 adding 'scripts/legacy/scil_validate_bids.py' 2024-05-10T18:04:18,145 adding 'scripts/legacy/scil_verify_space_attributes_compatibility.py' 2024-05-10T18:04:18,146 adding 'scripts/legacy/scil_visualize_bingham_fit.py' 2024-05-10T18:04:18,147 adding 'scripts/legacy/scil_visualize_bundles.py' 2024-05-10T18:04:18,148 adding 'scripts/legacy/scil_visualize_bundles_mosaic.py' 2024-05-10T18:04:18,149 adding 'scripts/legacy/scil_visualize_connectivity.py' 2024-05-10T18:04:18,151 adding 'scripts/legacy/scil_visualize_fodf.py' 2024-05-10T18:04:18,152 adding 'scripts/legacy/scil_visualize_gradients.py' 2024-05-10T18:04:18,153 adding 'scripts/legacy/scil_visualize_histogram.py' 2024-05-10T18:04:18,154 adding 'scripts/legacy/scil_visualize_scatterplot.py' 2024-05-10T18:04:18,155 adding 'scripts/legacy/scil_visualize_seeds.py' 2024-05-10T18:04:18,157 adding 'scripts/legacy/scil_visualize_seeds_3d.py' 2024-05-10T18:04:18,161 adding 'scripts/tests/__init__.py' 2024-05-10T18:04:18,163 adding 'scripts/tests/test_NODDI_maps.py' 2024-05-10T18:04:18,164 adding 'scripts/tests/test_NODDI_priors.py' 2024-05-10T18:04:18,165 adding 'scripts/tests/test_aodf_metrics.py' 2024-05-10T18:04:18,167 adding 'scripts/tests/test_bids_validate.py' 2024-05-10T18:04:18,168 adding 'scripts/tests/test_bingham_metrics.py' 2024-05-10T18:04:18,170 adding 'scripts/tests/test_btensor_metrics.py' 2024-05-10T18:04:18,171 adding 'scripts/tests/test_bundle_clean_qbx_clusters.py' 2024-05-10T18:04:18,172 adding 'scripts/tests/test_bundle_compute_centroid.py' 2024-05-10T18:04:18,174 adding 'scripts/tests/test_bundle_compute_endpoints_map.py' 2024-05-10T18:04:18,175 adding 'scripts/tests/test_bundle_diameter.py' 2024-05-10T18:04:18,176 adding 'scripts/tests/test_bundle_filter_by_occurence.py' 2024-05-10T18:04:18,177 adding 'scripts/tests/test_bundle_generate_priors.py' 2024-05-10T18:04:18,179 adding 'scripts/tests/test_bundle_label_map.py' 2024-05-10T18:04:18,180 adding 'scripts/tests/test_bundle_mean_fixel_afd.py' 2024-05-10T18:04:18,181 adding 'scripts/tests/test_bundle_mean_fixel_afd_from_hdf5.py' 2024-05-10T18:04:18,182 adding 'scripts/tests/test_bundle_mean_fixel_bingham_metric.py' 2024-05-10T18:04:18,183 adding 'scripts/tests/test_bundle_mean_std.py' 2024-05-10T18:04:18,185 adding 'scripts/tests/test_bundle_pairwise_comparison.py' 2024-05-10T18:04:18,186 adding 'scripts/tests/test_bundle_reject_outliers.py' 2024-05-10T18:04:18,187 adding 'scripts/tests/test_bundle_score_many_bundles_one_tractogram.py' 2024-05-10T18:04:18,189 adding 'scripts/tests/test_bundle_score_same_bundle_many_segmentations.py' 2024-05-10T18:04:18,190 adding 'scripts/tests/test_bundle_shape_measures.py' 2024-05-10T18:04:18,191 adding 'scripts/tests/test_bundle_uniformize_endpoints.py' 2024-05-10T18:04:18,193 adding 'scripts/tests/test_bundle_volume_per_label.py' 2024-05-10T18:04:18,194 adding 'scripts/tests/test_connectivity_compare_populations.py' 2024-05-10T18:04:18,195 adding 'scripts/tests/test_connectivity_compute_matrices.py' 2024-05-10T18:04:18,197 adding 'scripts/tests/test_connectivity_compute_pca.py' 2024-05-10T18:04:18,198 adding 'scripts/tests/test_connectivity_filter.py' 2024-05-10T18:04:18,199 adding 'scripts/tests/test_connectivity_graph_measures.py' 2024-05-10T18:04:18,200 adding 'scripts/tests/test_connectivity_hdf5_average_density_map.py' 2024-05-10T18:04:18,201 adding 'scripts/tests/test_connectivity_math.py' 2024-05-10T18:04:18,203 adding 'scripts/tests/test_connectivity_normalize.py' 2024-05-10T18:04:18,204 adding 'scripts/tests/test_connectivity_pairwise_agreement.py' 2024-05-10T18:04:18,205 adding 'scripts/tests/test_connectivity_print_filenames.py' 2024-05-10T18:04:18,207 adding 'scripts/tests/test_connectivity_reorder_rois.py' 2024-05-10T18:04:18,208 adding 'scripts/tests/test_denoising_nlmeans.py' 2024-05-10T18:04:18,209 adding 'scripts/tests/test_dki_metrics.py' 2024-05-10T18:04:18,210 adding 'scripts/tests/test_dti_convert_tensors.py' 2024-05-10T18:04:18,212 adding 'scripts/tests/test_dti_metrics.py' 2024-05-10T18:04:18,213 adding 'scripts/tests/test_dwi_apply_bias_field.py' 2024-05-10T18:04:18,214 adding 'scripts/tests/test_dwi_compute_snr.py' 2024-05-10T18:04:18,215 adding 'scripts/tests/test_dwi_concatenate.py' 2024-05-10T18:04:18,217 adding 'scripts/tests/test_dwi_convert_FDF.py' 2024-05-10T18:04:18,218 adding 'scripts/tests/test_dwi_detect_volume_outliers.py' 2024-05-10T18:04:18,219 adding 'scripts/tests/test_dwi_extract_b0.py' 2024-05-10T18:04:18,220 adding 'scripts/tests/test_dwi_extract_shell.py' 2024-05-10T18:04:18,221 adding 'scripts/tests/test_dwi_powder_average.py' 2024-05-10T18:04:18,223 adding 'scripts/tests/test_dwi_prepare_eddy_command.py' 2024-05-10T18:04:18,224 adding 'scripts/tests/test_dwi_prepare_topup_command.py' 2024-05-10T18:04:18,225 adding 'scripts/tests/test_dwi_reorder_philips.py' 2024-05-10T18:04:18,226 adding 'scripts/tests/test_dwi_split_by_indices.py' 2024-05-10T18:04:18,228 adding 'scripts/tests/test_dwi_to_sh.py' 2024-05-10T18:04:18,229 adding 'scripts/tests/test_fodf_max_in_ventricles.py' 2024-05-10T18:04:18,230 adding 'scripts/tests/test_fodf_memsmt.py' 2024-05-10T18:04:18,231 adding 'scripts/tests/test_fodf_metrics.py' 2024-05-10T18:04:18,233 adding 'scripts/tests/test_fodf_msmt.py' 2024-05-10T18:04:18,234 adding 'scripts/tests/test_fodf_ssst.py' 2024-05-10T18:04:18,235 adding 'scripts/tests/test_fodf_to_bingham.py' 2024-05-10T18:04:18,236 adding 'scripts/tests/test_freewater_maps.py' 2024-05-10T18:04:18,238 adding 'scripts/tests/test_freewater_priors.py' 2024-05-10T18:04:18,239 adding 'scripts/tests/test_frf_mean.py' 2024-05-10T18:04:18,241 adding 'scripts/tests/test_frf_memsmt.py' 2024-05-10T18:04:18,242 adding 'scripts/tests/test_frf_msmt.py' 2024-05-10T18:04:18,243 adding 'scripts/tests/test_frf_set_diffusivities.py' 2024-05-10T18:04:18,244 adding 'scripts/tests/test_frf_ssst.py' 2024-05-10T18:04:18,246 adding 'scripts/tests/test_gradients_apply_transform.py' 2024-05-10T18:04:18,247 adding 'scripts/tests/test_gradients_convert.py' 2024-05-10T18:04:18,248 adding 'scripts/tests/test_gradients_generate_sampling.py' 2024-05-10T18:04:18,250 adding 'scripts/tests/test_gradients_modify_axes.py' 2024-05-10T18:04:18,251 adding 'scripts/tests/test_gradients_round_bvals.py' 2024-05-10T18:04:18,252 adding 'scripts/tests/test_gradients_validate_correct.py' 2024-05-10T18:04:18,253 adding 'scripts/tests/test_gradients_validate_correct_eddy.py' 2024-05-10T18:04:18,254 adding 'scripts/tests/test_header_print_info.py' 2024-05-10T18:04:18,256 adding 'scripts/tests/test_header_validate_compatibility.py' 2024-05-10T18:04:18,257 adding 'scripts/tests/test_json_convert_entries_to_xlsx.py' 2024-05-10T18:04:18,258 adding 'scripts/tests/test_json_harmonize_entries.py' 2024-05-10T18:04:18,259 adding 'scripts/tests/test_json_merge_entries.py' 2024-05-10T18:04:18,261 adding 'scripts/tests/test_labels_combine.py' 2024-05-10T18:04:18,262 adding 'scripts/tests/test_labels_dilate.py' 2024-05-10T18:04:18,263 adding 'scripts/tests/test_labels_remove.py' 2024-05-10T18:04:18,264 adding 'scripts/tests/test_labels_split_volume_by_ids.py' 2024-05-10T18:04:18,265 adding 'scripts/tests/test_labels_split_volume_from_lut.py' 2024-05-10T18:04:18,267 adding 'scripts/tests/test_lesions_info.py' 2024-05-10T18:04:18,268 adding 'scripts/tests/test_mti_adjust_B1_header.py' 2024-05-10T18:04:18,270 adding 'scripts/tests/test_mti_maps_MT.py' 2024-05-10T18:04:18,271 adding 'scripts/tests/test_mti_maps_ihMT.py' 2024-05-10T18:04:18,273 adding 'scripts/tests/test_plot_stats_per_point.py' 2024-05-10T18:04:18,274 adding 'scripts/tests/test_qball_metrics.py' 2024-05-10T18:04:18,276 adding 'scripts/tests/test_rgb_convert.py' 2024-05-10T18:04:18,277 adding 'scripts/tests/test_search_keywords.py' 2024-05-10T18:04:18,278 adding 'scripts/tests/test_sh_convert.py' 2024-05-10T18:04:18,279 adding 'scripts/tests/test_sh_fusion.py' 2024-05-10T18:04:18,281 adding 'scripts/tests/test_sh_to_aodf.py' 2024-05-10T18:04:18,282 adding 'scripts/tests/test_sh_to_rish.py' 2024-05-10T18:04:18,283 adding 'scripts/tests/test_sh_to_sf.py' 2024-05-10T18:04:18,285 adding 'scripts/tests/test_stats_group_comparison.py' 2024-05-10T18:04:18,286 adding 'scripts/tests/test_surface_apply_transform.py' 2024-05-10T18:04:18,287 adding 'scripts/tests/test_surface_convert.py' 2024-05-10T18:04:18,289 adding 'scripts/tests/test_surface_flip.py' 2024-05-10T18:04:18,290 adding 'scripts/tests/test_surface_smooth.py' 2024-05-10T18:04:18,291 adding 'scripts/tests/test_tracking_local.py' 2024-05-10T18:04:18,293 adding 'scripts/tests/test_tracking_local_dev.py' 2024-05-10T18:04:18,294 adding 'scripts/tests/test_tracking_pft.py' 2024-05-10T18:04:18,295 adding 'scripts/tests/test_tracking_pft_maps.py' 2024-05-10T18:04:18,296 adding 'scripts/tests/test_tracking_pft_maps_edit.py' 2024-05-10T18:04:18,298 adding 'scripts/tests/test_tractogram_apply_transform.py' 2024-05-10T18:04:18,299 adding 'scripts/tests/test_tractogram_apply_transform_to_hdf5.py' 2024-05-10T18:04:18,300 adding 'scripts/tests/test_tractogram_assign_custom_color.py' 2024-05-10T18:04:18,301 adding 'scripts/tests/test_tractogram_assign_uniform_color.py' 2024-05-10T18:04:18,303 adding 'scripts/tests/test_tractogram_commit.py' 2024-05-10T18:04:18,304 adding 'scripts/tests/test_tractogram_compress.py' 2024-05-10T18:04:18,305 adding 'scripts/tests/test_tractogram_compute_TODI.py' 2024-05-10T18:04:18,307 adding 'scripts/tests/test_tractogram_compute_density_map.py' 2024-05-10T18:04:18,308 adding 'scripts/tests/test_tractogram_convert.py' 2024-05-10T18:04:18,309 adding 'scripts/tests/test_tractogram_convert_hdf5_to_trk.py' 2024-05-10T18:04:18,310 adding 'scripts/tests/test_tractogram_count_streamlines.py' 2024-05-10T18:04:18,312 adding 'scripts/tests/test_tractogram_cut_streamlines.py' 2024-05-10T18:04:18,313 adding 'scripts/tests/test_tractogram_detect_loops.py' 2024-05-10T18:04:18,314 adding 'scripts/tests/test_tractogram_dpp_math.py' 2024-05-10T18:04:18,316 adding 'scripts/tests/test_tractogram_extract_ushape.py' 2024-05-10T18:04:18,317 adding 'scripts/tests/test_tractogram_filter_by_anatomy.py' 2024-05-10T18:04:18,318 adding 'scripts/tests/test_tractogram_filter_by_length.py' 2024-05-10T18:04:18,320 adding 'scripts/tests/test_tractogram_filter_by_orientation.py' 2024-05-10T18:04:18,321 adding 'scripts/tests/test_tractogram_filter_by_roi.py' 2024-05-10T18:04:18,322 adding 'scripts/tests/test_tractogram_fix_trk.py' 2024-05-10T18:04:18,323 adding 'scripts/tests/test_tractogram_flip.py' 2024-05-10T18:04:18,325 adding 'scripts/tests/test_tractogram_math.py' 2024-05-10T18:04:18,326 adding 'scripts/tests/test_tractogram_pairwise_comparison.py' 2024-05-10T18:04:18,327 adding 'scripts/tests/test_tractogram_print_info.py' 2024-05-10T18:04:18,328 adding 'scripts/tests/test_tractogram_project_map_to_streamlines.py' 2024-05-10T18:04:18,330 adding 'scripts/tests/test_tractogram_project_streamlines_to_map.py' 2024-05-10T18:04:18,331 adding 'scripts/tests/test_tractogram_qbx.py' 2024-05-10T18:04:18,332 adding 'scripts/tests/test_tractogram_register.py' 2024-05-10T18:04:18,333 adding 'scripts/tests/test_tractogram_remove_invalid.py' 2024-05-10T18:04:18,334 adding 'scripts/tests/test_tractogram_resample.py' 2024-05-10T18:04:18,336 adding 'scripts/tests/test_tractogram_resample_nb_points.py' 2024-05-10T18:04:18,337 adding 'scripts/tests/test_tractogram_seed_density_map.py' 2024-05-10T18:04:18,338 adding 'scripts/tests/test_tractogram_segment_and_score.py' 2024-05-10T18:04:18,340 adding 'scripts/tests/test_tractogram_segment_bundles.py' 2024-05-10T18:04:18,341 adding 'scripts/tests/test_tractogram_segment_bundles_for_connectivity.py' 2024-05-10T18:04:18,342 adding 'scripts/tests/test_tractogram_segment_one_bundles.py' 2024-05-10T18:04:18,343 adding 'scripts/tests/test_tractogram_shuffle.py' 2024-05-10T18:04:18,344 adding 'scripts/tests/test_tractogram_smooth.py' 2024-05-10T18:04:18,346 adding 'scripts/tests/test_tractogram_split.py' 2024-05-10T18:04:18,347 adding 'scripts/tests/test_viz_bingham_fit.py' 2024-05-10T18:04:18,348 adding 'scripts/tests/test_viz_bundle.py' 2024-05-10T18:04:18,349 adding 'scripts/tests/test_viz_bundle_screenshot_mni.py' 2024-05-10T18:04:18,350 adding 'scripts/tests/test_viz_bundle_screenshot_mosaic.py' 2024-05-10T18:04:18,351 adding 'scripts/tests/test_viz_connectivity.py' 2024-05-10T18:04:18,353 adding 'scripts/tests/test_viz_dti_screenshot.py' 2024-05-10T18:04:18,354 adding 'scripts/tests/test_viz_fodf.py' 2024-05-10T18:04:18,355 adding 'scripts/tests/test_viz_gradients_screenshot.py' 2024-05-10T18:04:18,356 adding 'scripts/tests/test_viz_tractogram_seeds.py' 2024-05-10T18:04:18,357 adding 'scripts/tests/test_viz_tractogram_seeds_3d.py' 2024-05-10T18:04:18,358 adding 'scripts/tests/test_viz_volume_histogram.py' 2024-05-10T18:04:18,360 adding 'scripts/tests/test_viz_volume_scatterplot.py' 2024-05-10T18:04:18,361 adding 'scripts/tests/test_viz_volume_screenshot.py' 2024-05-10T18:04:18,362 adding 'scripts/tests/test_viz_volume_screenshot_mosaic.py' 2024-05-10T18:04:18,363 adding 'scripts/tests/test_volume_apply_transform.py' 2024-05-10T18:04:18,364 adding 'scripts/tests/test_volume_b0_synthesis.py' 2024-05-10T18:04:18,366 adding 'scripts/tests/test_volume_count_non_zero_voxels.py' 2024-05-10T18:04:18,367 adding 'scripts/tests/test_volume_crop.py' 2024-05-10T18:04:18,368 adding 'scripts/tests/test_volume_flip.py' 2024-05-10T18:04:18,370 adding 'scripts/tests/test_volume_math.py' 2024-05-10T18:04:18,371 adding 'scripts/tests/test_volume_remove_outliers_ransac.py' 2024-05-10T18:04:18,372 adding 'scripts/tests/test_volume_resample.py' 2024-05-10T18:04:18,374 adding 'scripts/tests/test_volume_reshape_to_reference.py' 2024-05-10T18:04:18,375 adding 'scripts/tests/test_volume_stats_in_ROI.py' 2024-05-10T18:04:18,376 adding 'scripts/tests/test_volume_stats_in_labels.py' 2024-05-10T18:04:18,378 adding 'scilpy-2.0.2.dist-info/LICENSE' 2024-05-10T18:04:18,379 adding 'scilpy-2.0.2.dist-info/METADATA' 2024-05-10T18:04:18,380 adding 'scilpy-2.0.2.dist-info/WHEEL' 2024-05-10T18:04:18,382 adding 'scilpy-2.0.2.dist-info/entry_points.txt' 2024-05-10T18:04:18,383 adding 'scilpy-2.0.2.dist-info/top_level.txt' 2024-05-10T18:04:18,394 adding 'scilpy-2.0.2.dist-info/RECORD' 2024-05-10T18:04:18,427 removing build/bdist.linux-armv7l/wheel 2024-05-10T18:04:19,301 Building wheel for scilpy (setup.py): finished with status 'done' 2024-05-10T18:04:19,328 Created wheel for scilpy: filename=scilpy-2.0.2-cp39-cp39-linux_armv7l.whl size=2346026 sha256=6bd97516a6930800498f48a48c5f2ab97a1ba370c5d06c8be27c96cc51780561 2024-05-10T18:04:19,329 Stored in directory: /tmp/pip-ephem-wheel-cache-krxsnm8f/wheels/84/af/62/7a56a6067a13eb5b2bca98d0ca2bf21af7631ec5ef12e6514d 2024-05-10T18:04:19,361 Successfully built scilpy 2024-05-10T18:04:19,428 Removed build tracker: '/tmp/pip-build-tracker-brl5jv0r'