2024-05-14T06:01:01,649 Created temporary directory: /tmp/pip-build-tracker-o0brak3y
2024-05-14T06:01:01,655 Initialized build tracking at /tmp/pip-build-tracker-o0brak3y
2024-05-14T06:01:01,655 Created build tracker: /tmp/pip-build-tracker-o0brak3y
2024-05-14T06:01:01,655 Entered build tracker: /tmp/pip-build-tracker-o0brak3y
2024-05-14T06:01:01,657 Created temporary directory: /tmp/pip-wheel-cdy3ztdv
2024-05-14T06:01:01,662 Created temporary directory: /tmp/pip-ephem-wheel-cache-0ntmzxg8
2024-05-14T06:01:01,721 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-14T06:01:01,724 2 location(s) to search for versions of pybiotk:
2024-05-14T06:01:01,724 * https://pypi.org/simple/pybiotk/
2024-05-14T06:01:01,724 * https://www.piwheels.org/simple/pybiotk/
2024-05-14T06:01:01,725 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2024-05-14T06:01:01,726 Getting page https://pypi.org/simple/pybiotk/
2024-05-14T06:01:01,727 Found index url https://pypi.org/simple/
2024-05-14T06:01:01,784 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2024-05-14T06:01:01,787   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2024-05-14T06:01:01,788   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2024-05-14T06:01:01,788   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2024-05-14T06:01:01,788   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2024-05-14T06:01:01,788   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2024-05-14T06:01:01,789   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2024-05-14T06:01:01,789   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2024-05-14T06:01:01,789   Found link https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.1
2024-05-14T06:01:01,790   Found link https://files.pythonhosted.org/packages/f7/2d/b38d75abba8592955a86e4d86c64229b02b37582049427c21925443b1807/pybiotk-1.2.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.0
2024-05-14T06:01:01,790   Found link https://files.pythonhosted.org/packages/d3/45/4f60c095cbd938d73427d73089a67014adb3f91d0b4f5b0e52a815bd550e/pybiotk-1.2.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.1
2024-05-14T06:01:01,790   Found link https://files.pythonhosted.org/packages/df/39/c06c8538af00a45170fa6216e13703fefeee2b5b195227cacff55d94e8bb/pybiotk-1.2.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.3
2024-05-14T06:01:01,790   Found link https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.5
2024-05-14T06:01:01,791   Found link https://files.pythonhosted.org/packages/2f/ec/9b017cf466b5e2489566c1efb857b51519c4446d7d936bd00e26cbd0a0a3/pybiotk-1.2.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.6
2024-05-14T06:01:01,791   Found link https://files.pythonhosted.org/packages/c9/89/e369e981702b24082a840ab6e988062653b861ccd9bab4cfd7ec1e625c8b/pybiotk-1.2.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.7
2024-05-14T06:01:01,791   Found link https://files.pythonhosted.org/packages/5e/18/245e4c2f522ab75d284adf9b93c3f72afa9d063b935452ad6a6409d1d7b1/pybiotk-1.2.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.8
2024-05-14T06:01:01,792 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2024-05-14T06:01:01,792 Getting page https://www.piwheels.org/simple/pybiotk/
2024-05-14T06:01:01,793 Found index url https://www.piwheels.org/simple/
2024-05-14T06:01:02,092 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2024-05-14T06:01:02,115   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp311-cp311-linux_armv6l.whl#sha256=ee432a6579f1fd3fc588081bf929404c95dc1ec104d35700f9da36f7ee5078a7 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,115   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp311-cp311-linux_armv7l.whl#sha256=ee432a6579f1fd3fc588081bf929404c95dc1ec104d35700f9da36f7ee5078a7 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,115   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp37-cp37m-linux_armv6l.whl#sha256=2dad54fc21da140dd42f1aed2ee62c105009897b4a34c91d2f89f9595f0866e7 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,116   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp37-cp37m-linux_armv7l.whl#sha256=2dad54fc21da140dd42f1aed2ee62c105009897b4a34c91d2f89f9595f0866e7 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,116   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp311-cp311-linux_armv6l.whl#sha256=be2eff96a402b9d784fbe795b3ffff5ba8c149b8f780f362eeb902794cc56dab (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,116   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp311-cp311-linux_armv7l.whl#sha256=be2eff96a402b9d784fbe795b3ffff5ba8c149b8f780f362eeb902794cc56dab (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,117   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp37-cp37m-linux_armv6l.whl#sha256=3edb6b06140229d192e72146378b27e67c3211117690ca071ac7d04014e6e367 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,117   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp37-cp37m-linux_armv7l.whl#sha256=3edb6b06140229d192e72146378b27e67c3211117690ca071ac7d04014e6e367 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,117   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp39-cp39-linux_armv6l.whl#sha256=109478ef17f1cfa2e053a1865c6d523b1c0f142ee846d2f1b327bec7bd32c550 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,118   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp39-cp39-linux_armv7l.whl#sha256=109478ef17f1cfa2e053a1865c6d523b1c0f142ee846d2f1b327bec7bd32c550 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,118   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp311-cp311-linux_armv6l.whl#sha256=2e6e790cdb7a9961cdc23b59eb08e3be5b5cec16a299740bf31ed11c1f99d588 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,118   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp311-cp311-linux_armv7l.whl#sha256=2e6e790cdb7a9961cdc23b59eb08e3be5b5cec16a299740bf31ed11c1f99d588 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,119   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp37-cp37m-linux_armv6l.whl#sha256=8c342ebc4df96b4e7847f378fad7f412b85012b0ad45c0f072f3fd0f750a5167 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,119   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp37-cp37m-linux_armv7l.whl#sha256=8c342ebc4df96b4e7847f378fad7f412b85012b0ad45c0f072f3fd0f750a5167 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,119   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp39-cp39-linux_armv6l.whl#sha256=f57ae8939de5533395110329ff1c9707b9d3b88b4e37a974cb8f1d2d1c7f3f10 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,120   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp39-cp39-linux_armv7l.whl#sha256=f57ae8939de5533395110329ff1c9707b9d3b88b4e37a974cb8f1d2d1c7f3f10 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,120   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv6l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,120   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv7l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,121   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv6l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,121   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv7l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,121   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp39-cp39-linux_armv6l.whl#sha256=1bc04a508737f0d58899a64d071a1a96b30deed761a1e3fe01629f887fb9d5fc (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,122   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp39-cp39-linux_armv7l.whl#sha256=1bc04a508737f0d58899a64d071a1a96b30deed761a1e3fe01629f887fb9d5fc (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,122   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv6l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,122   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv7l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,123   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv6l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,123   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv7l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,123   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv6l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,124   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv7l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,124   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,124   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,125   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,125   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,125   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,126   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,126   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,126   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,126   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,127   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,127   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,127   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,128   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,128   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,128   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,129   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,129   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,129   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,130   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,130   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,130   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,131   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,131   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,131   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,131   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,132   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,132   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,132   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,133   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,133   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,133   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,134   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,134   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,134   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,135   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,135   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,135   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,136   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,136   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,136   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,137   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,137   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2024-05-14T06:01:02,137 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2024-05-14T06:01:02,138 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2024-05-14T06:01:02,169 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2024-05-14T06:01:02,196 Collecting pybiotk==1.2.8
2024-05-14T06:01:02,199   Created temporary directory: /tmp/pip-unpack-7a0da5kz
2024-05-14T06:01:02,245   Downloading pybiotk-1.2.8.tar.gz (102 kB)
2024-05-14T06:01:02,546   Added pybiotk==1.2.8 from https://files.pythonhosted.org/packages/5e/18/245e4c2f522ab75d284adf9b93c3f72afa9d063b935452ad6a6409d1d7b1/pybiotk-1.2.8.tar.gz to build tracker '/tmp/pip-build-tracker-o0brak3y'
2024-05-14T06:01:02,553   Created temporary directory: /tmp/pip-build-env-0mg6r2aq
2024-05-14T06:01:02,566   Installing build dependencies: started
2024-05-14T06:01:02,567   Running command pip subprocess to install build dependencies
2024-05-14T06:01:03,762   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-05-14T06:01:04,280   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-14T06:01:06,570   Collecting setuptools>=46.1.0
2024-05-14T06:01:06,588     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB)
2024-05-14T06:01:06,954   Collecting setuptools_scm>=5 (from setuptools_scm[toml]>=5)
2024-05-14T06:01:06,973     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB)
2024-05-14T06:01:07,207   Collecting wheel
2024-05-14T06:01:07,224     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-05-14T06:01:08,598   Collecting Cython
2024-05-14T06:01:09,697     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp39-cp39-linux_armv7l.whl (10.7 MB)
2024-05-14T06:01:11,433   Collecting packaging>=20 (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2024-05-14T06:01:11,611     Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB)
2024-05-14T06:01:12,633   Collecting typing-extensions (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2024-05-14T06:01:12,652     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.11.0-py3-none-any.whl (34 kB)
2024-05-14T06:01:12,768   Collecting tomli>=1 (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2024-05-14T06:01:12,787     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2024-05-14T06:01:14,996   Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, Cython, setuptools_scm
2024-05-14T06:01:15,218     Creating /tmp/pip-build-env-0mg6r2aq/overlay/bin
2024-05-14T06:01:15,220     changing mode of /tmp/pip-build-env-0mg6r2aq/overlay/bin/wheel to 755
2024-05-14T06:01:22,209     changing mode of /tmp/pip-build-env-0mg6r2aq/overlay/bin/cygdb to 755
2024-05-14T06:01:22,211     changing mode of /tmp/pip-build-env-0mg6r2aq/overlay/bin/cython to 755
2024-05-14T06:01:22,213     changing mode of /tmp/pip-build-env-0mg6r2aq/overlay/bin/cythonize to 755
2024-05-14T06:01:23,501   Successfully installed Cython-3.0.10 packaging-24.0 setuptools-69.5.1 setuptools_scm-8.1.0 tomli-2.0.1 typing-extensions-4.11.0 wheel-0.43.0
2024-05-14T06:01:24,097   Installing build dependencies: finished with status 'done'
2024-05-14T06:01:24,102   Getting requirements to build wheel: started
2024-05-14T06:01:24,103   Running command Getting requirements to build wheel
2024-05-14T06:01:27,370   Compiling src/bx/bitset.pyx because it changed.
2024-05-14T06:01:27,371   Compiling src/bx/cluster.pyx because it changed.
2024-05-14T06:01:27,371   Compiling src/bx/intersection.pyx because it changed.
2024-05-14T06:01:27,371   [1/3] Cythonizing src/bx/bitset.pyx
2024-05-14T06:01:27,371   [2/3] Cythonizing src/bx/cluster.pyx
2024-05-14T06:01:27,372   [3/3] Cythonizing src/bx/intersection.pyx
2024-05-14T06:01:27,555   /tmp/pip-build-env-0mg6r2aq/overlay/lib/python3.9/site-packages/setuptools_scm/_integration/setuptools.py:92: UserWarning: version of None already set
2024-05-14T06:01:27,555     warnings.warn(f"version of {dist_name} already set")
2024-05-14T06:01:27,666   running egg_info
2024-05-14T06:01:27,675   writing src/pybiotk.egg-info/PKG-INFO
2024-05-14T06:01:27,680   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2024-05-14T06:01:27,683   writing entry points to src/pybiotk.egg-info/entry_points.txt
2024-05-14T06:01:27,685   writing requirements to src/pybiotk.egg-info/requires.txt
2024-05-14T06:01:27,687   writing top-level names to src/pybiotk.egg-info/top_level.txt
2024-05-14T06:01:27,802   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-14T06:01:27,825   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:27,831   adding license file 'LICENSE.txt'
2024-05-14T06:01:27,839   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:28,073   Getting requirements to build wheel: finished with status 'done'
2024-05-14T06:01:28,083   Created temporary directory: /tmp/pip-modern-metadata-z8_at2c5
2024-05-14T06:01:28,087   Preparing metadata (pyproject.toml): started
2024-05-14T06:01:28,088   Running command Preparing metadata (pyproject.toml)
2024-05-14T06:01:29,353   /tmp/pip-build-env-0mg6r2aq/overlay/lib/python3.9/site-packages/setuptools_scm/_integration/setuptools.py:92: UserWarning: version of None already set
2024-05-14T06:01:29,354     warnings.warn(f"version of {dist_name} already set")
2024-05-14T06:01:29,468   running dist_info
2024-05-14T06:01:29,476   creating /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info
2024-05-14T06:01:29,483   writing /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/PKG-INFO
2024-05-14T06:01:29,488   writing dependency_links to /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/dependency_links.txt
2024-05-14T06:01:29,491   writing entry points to /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/entry_points.txt
2024-05-14T06:01:29,493   writing requirements to /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/requires.txt
2024-05-14T06:01:29,494   writing top-level names to /tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/top_level.txt
2024-05-14T06:01:29,496   writing manifest file '/tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:29,591   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-14T06:01:29,600   reading manifest file '/tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:29,604   adding license file 'LICENSE.txt'
2024-05-14T06:01:29,609   writing manifest file '/tmp/pip-modern-metadata-z8_at2c5/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:29,610   creating '/tmp/pip-modern-metadata-z8_at2c5/pybiotk-1.2.8.dist-info'
2024-05-14T06:01:29,825   Preparing metadata (pyproject.toml): finished with status 'done'
2024-05-14T06:01:29,831   Source in /tmp/pip-wheel-cdy3ztdv/pybiotk_bb17df31daa54d18a0666a0d54e2af36 has version 1.2.8, which satisfies requirement pybiotk==1.2.8 from https://files.pythonhosted.org/packages/5e/18/245e4c2f522ab75d284adf9b93c3f72afa9d063b935452ad6a6409d1d7b1/pybiotk-1.2.8.tar.gz
2024-05-14T06:01:29,832   Removed pybiotk==1.2.8 from https://files.pythonhosted.org/packages/5e/18/245e4c2f522ab75d284adf9b93c3f72afa9d063b935452ad6a6409d1d7b1/pybiotk-1.2.8.tar.gz from build tracker '/tmp/pip-build-tracker-o0brak3y'
2024-05-14T06:01:29,836 Created temporary directory: /tmp/pip-unpack-oue_b6sx
2024-05-14T06:01:29,837 Created temporary directory: /tmp/pip-unpack-yr0utpgz
2024-05-14T06:01:29,858 Building wheels for collected packages: pybiotk
2024-05-14T06:01:29,862   Created temporary directory: /tmp/pip-wheel-4yfhjm8i
2024-05-14T06:01:29,862   Destination directory: /tmp/pip-wheel-4yfhjm8i
2024-05-14T06:01:29,864   Building wheel for pybiotk (pyproject.toml): started
2024-05-14T06:01:29,865   Running command Building wheel for pybiotk (pyproject.toml)
2024-05-14T06:01:31,098   /tmp/pip-build-env-0mg6r2aq/overlay/lib/python3.9/site-packages/setuptools_scm/_integration/setuptools.py:92: UserWarning: version of None already set
2024-05-14T06:01:31,099     warnings.warn(f"version of {dist_name} already set")
2024-05-14T06:01:31,240   running bdist_wheel
2024-05-14T06:01:31,299   running build
2024-05-14T06:01:31,299   running build_py
2024-05-14T06:01:31,309   creating build/lib.linux-armv7l-cpython-39
2024-05-14T06:01:31,309   creating build/lib.linux-armv7l-cpython-39/pybiotk
2024-05-14T06:01:31,310   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk
2024-05-14T06:01:31,312   creating build/lib.linux-armv7l-cpython-39/stream
2024-05-14T06:01:31,313   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-39/stream
2024-05-14T06:01:31,317   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-39/stream
2024-05-14T06:01:31,320   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-39/stream
2024-05-14T06:01:31,322   creating build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2024-05-14T06:01:31,323   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2024-05-14T06:01:31,326   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2024-05-14T06:01:31,328   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2024-05-14T06:01:31,330   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2024-05-14T06:01:31,332   creating build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,333   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,336   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,339   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,341   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,344   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2024-05-14T06:01:31,346   creating build/lib.linux-armv7l-cpython-39/pybiotk/string
2024-05-14T06:01:31,347   copying src/pybiotk/string/sequence.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2024-05-14T06:01:31,348   copying src/pybiotk/string/motif.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2024-05-14T06:01:31,350   copying src/pybiotk/string/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2024-05-14T06:01:31,352   creating build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,353   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,356   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,358   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,360   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,362   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,364   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,366   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2024-05-14T06:01:31,370   creating build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,370   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,373   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,375   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,378   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,380   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,383   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,385   copying src/pybiotk/utils/ercc_parser.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,387   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,388   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,390   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,392   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,394   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,396   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,398   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,399   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,402   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,403   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,405   copying src/pybiotk/utils/bigwigfetcher.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,407   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,409   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,410   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,412   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,414   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2024-05-14T06:01:31,416   creating build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,417   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,419   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,421   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,423   copying src/pybiotk/convert/fa2fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,424   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,426   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,428   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2024-05-14T06:01:31,430   creating build/lib.linux-armv7l-cpython-39/pybiotk/data
2024-05-14T06:01:31,430   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2024-05-14T06:01:31,432   running egg_info
2024-05-14T06:01:31,438   writing src/pybiotk.egg-info/PKG-INFO
2024-05-14T06:01:31,442   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2024-05-14T06:01:31,445   writing entry points to src/pybiotk.egg-info/entry_points.txt
2024-05-14T06:01:31,447   writing requirements to src/pybiotk.egg-info/requires.txt
2024-05-14T06:01:31,449   writing top-level names to src/pybiotk.egg-info/top_level.txt
2024-05-14T06:01:31,496   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-14T06:01:31,505   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:31,510   adding license file 'LICENSE.txt'
2024-05-14T06:01:31,517   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2024-05-14T06:01:31,525   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2024-05-14T06:01:31,528   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2024-05-14T06:01:31,535   running build_ext
2024-05-14T06:01:31,545   building 'pybiotk.bx.bitset' extension
2024-05-14T06:01:31,549   creating build/temp.linux-armv7l-cpython-39
2024-05-14T06:01:31,549   creating build/temp.linux-armv7l-cpython-39/build
2024-05-14T06:01:31,550   creating build/temp.linux-armv7l-cpython-39/build/src
2024-05-14T06:01:31,551   creating build/temp.linux-armv7l-cpython-39/build/src/bx
2024-05-14T06:01:31,552   creating build/temp.linux-armv7l-cpython-39/src
2024-05-14T06:01:31,552   creating build/temp.linux-armv7l-cpython-39/src/bx
2024-05-14T06:01:31,553   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o
2024-05-14T06:01:42,936   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o
2024-05-14T06:01:43,316   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-39/src/bx/bits.o
2024-05-14T06:01:43,706   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-39/src/bx/common.o
2024-05-14T06:01:43,880   creating build/lib.linux-armv7l-cpython-39/pybiotk/bx
2024-05-14T06:01:43,881   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o build/temp.linux-armv7l-cpython-39/src/bx/bits.o build/temp.linux-armv7l-cpython-39/src/bx/common.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so
2024-05-14T06:01:44,022   building 'pybiotk.bx.cluster' extension
2024-05-14T06:01:44,022   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o
2024-05-14T06:01:48,462   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so
2024-05-14T06:01:48,571   building 'pybiotk.bx.intersection' extension
2024-05-14T06:01:48,572   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o
2024-05-14T06:02:03,540   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so
2024-05-14T06:02:03,671   running build_scripts
2024-05-14T06:02:03,672   creating build/scripts-3.9
2024-05-14T06:02:03,674   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.9
2024-05-14T06:02:03,676   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.9
2024-05-14T06:02:03,678   copying rscripts/plot_venn.R -> build/scripts-3.9
2024-05-14T06:02:03,681   copying rscripts/plot_chip_summary.R -> build/scripts-3.9
2024-05-14T06:02:03,683   copying rscripts/plot_hist.R -> build/scripts-3.9
2024-05-14T06:02:03,685   copying rscripts/plot_peak_width.R -> build/scripts-3.9
2024-05-14T06:02:03,687   copying rscripts/plot_rep_cor.R -> build/scripts-3.9
2024-05-14T06:02:03,690   copying rscripts/plot_bar.R -> build/scripts-3.9
2024-05-14T06:02:03,692   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.9
2024-05-14T06:02:03,694   copying rscripts/plot_corr.R -> build/scripts-3.9
2024-05-14T06:02:03,696   copying rscripts/peak_anno.R -> build/scripts-3.9
2024-05-14T06:02:03,698   copying rscripts/diff_expr_plot.R -> build/scripts-3.9
2024-05-14T06:02:03,701   copying rscripts/plot_FRiPs.R -> build/scripts-3.9
2024-05-14T06:02:03,704   copying scripts/get_chrom_length.sh -> build/scripts-3.9
2024-05-14T06:02:03,706   copying scripts/remove_duplicates.sh -> build/scripts-3.9
2024-05-14T06:02:03,707   copying scripts/merge_subseq.sh -> build/scripts-3.9
2024-05-14T06:02:03,710   copying scripts/gtfparser.sh -> build/scripts-3.9
2024-05-14T06:02:03,712   copying scripts/fasta_u2t.sh -> build/scripts-3.9
2024-05-14T06:02:03,714   copying scripts/fastq_len.sh -> build/scripts-3.9
2024-05-14T06:02:03,716   copying scripts/fasta_len.sh -> build/scripts-3.9
2024-05-14T06:02:03,717   changing mode of build/scripts-3.9/plot_deeptools_fragmentsize.R from 644 to 755
2024-05-14T06:02:03,717   changing mode of build/scripts-3.9/diff_expr_DESeq2.R from 644 to 755
2024-05-14T06:02:03,718   changing mode of build/scripts-3.9/plot_venn.R from 644 to 755
2024-05-14T06:02:03,718   changing mode of build/scripts-3.9/plot_chip_summary.R from 644 to 755
2024-05-14T06:02:03,719   changing mode of build/scripts-3.9/plot_hist.R from 644 to 755
2024-05-14T06:02:03,719   changing mode of build/scripts-3.9/plot_peak_width.R from 644 to 755
2024-05-14T06:02:03,719   changing mode of build/scripts-3.9/plot_rep_cor.R from 644 to 755
2024-05-14T06:02:03,720   changing mode of build/scripts-3.9/plot_bar.R from 644 to 755
2024-05-14T06:02:03,720   changing mode of build/scripts-3.9/diff_expr_edgeR.R from 644 to 755
2024-05-14T06:02:03,720   changing mode of build/scripts-3.9/plot_corr.R from 644 to 755
2024-05-14T06:02:03,721   changing mode of build/scripts-3.9/peak_anno.R from 644 to 755
2024-05-14T06:02:03,721   changing mode of build/scripts-3.9/diff_expr_plot.R from 644 to 755
2024-05-14T06:02:03,721   changing mode of build/scripts-3.9/plot_FRiPs.R from 644 to 755
2024-05-14T06:02:03,722   changing mode of build/scripts-3.9/get_chrom_length.sh from 644 to 755
2024-05-14T06:02:03,722   changing mode of build/scripts-3.9/remove_duplicates.sh from 644 to 755
2024-05-14T06:02:03,722   changing mode of build/scripts-3.9/merge_subseq.sh from 644 to 755
2024-05-14T06:02:03,723   changing mode of build/scripts-3.9/gtfparser.sh from 644 to 755
2024-05-14T06:02:03,723   changing mode of build/scripts-3.9/fasta_u2t.sh from 644 to 755
2024-05-14T06:02:03,724   changing mode of build/scripts-3.9/fastq_len.sh from 644 to 755
2024-05-14T06:02:03,724   changing mode of build/scripts-3.9/fasta_len.sh from 644 to 755
2024-05-14T06:02:03,749   installing to build/bdist.linux-armv7l/wheel
2024-05-14T06:02:03,749   running install
2024-05-14T06:02:03,775   running install_lib
2024-05-14T06:02:03,784   creating build/bdist.linux-armv7l
2024-05-14T06:02:03,784   creating build/bdist.linux-armv7l/wheel
2024-05-14T06:02:03,786   creating build/bdist.linux-armv7l/wheel/pybiotk
2024-05-14T06:02:03,787   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2024-05-14T06:02:03,788   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2024-05-14T06:02:03,791   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2024-05-14T06:02:03,792   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2024-05-14T06:02:03,794   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2024-05-14T06:02:03,796   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,797   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,800   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,802   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,805   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,807   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2024-05-14T06:02:03,809   creating build/bdist.linux-armv7l/wheel/pybiotk/string
2024-05-14T06:02:03,810   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/sequence.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2024-05-14T06:02:03,816   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/motif.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2024-05-14T06:02:03,818   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2024-05-14T06:02:03,820   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,821   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,823   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,826   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,828   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,831   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,832   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,834   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2024-05-14T06:02:03,837   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,838   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,841   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,843   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,846   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,848   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,849   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,852   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/ercc_parser.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,854   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,855   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,857   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,859   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,861   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,864   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,866   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,867   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,870   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,872   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,875   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/bigwigfetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,881   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,883   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,885   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,886   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,888   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2024-05-14T06:02:03,890   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2024-05-14T06:02:03,891   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2024-05-14T06:02:03,916   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2024-05-14T06:02:03,925   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2024-05-14T06:02:03,941   copying build/lib.linux-armv7l-cpython-39/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk
2024-05-14T06:02:03,943   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,943   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,945   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,947   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,949   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fa2fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,951   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,953   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,954   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2024-05-14T06:02:03,956   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2024-05-14T06:02:03,957   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2024-05-14T06:02:03,959   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2024-05-14T06:02:03,961   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/data
2024-05-14T06:02:03,963   creating build/bdist.linux-armv7l/wheel/stream
2024-05-14T06:02:03,964   copying build/lib.linux-armv7l-cpython-39/stream/pipe.py -> build/bdist.linux-armv7l/wheel/stream
2024-05-14T06:02:03,967   copying build/lib.linux-armv7l-cpython-39/stream/stream.py -> build/bdist.linux-armv7l/wheel/stream
2024-05-14T06:02:03,969   copying build/lib.linux-armv7l-cpython-39/stream/__init__.py -> build/bdist.linux-armv7l/wheel/stream
2024-05-14T06:02:03,970   running install_egg_info
2024-05-14T06:02:03,981   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/pybiotk-1.2.8-py3.9.egg-info
2024-05-14T06:02:03,995   running install_scripts
2024-05-14T06:02:03,996   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data
2024-05-14T06:02:03,997   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:03,998   copying build/scripts-3.9/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,000   copying build/scripts-3.9/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,002   copying build/scripts-3.9/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,004   copying build/scripts-3.9/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,006   copying build/scripts-3.9/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,007   copying build/scripts-3.9/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,009   copying build/scripts-3.9/plot_chip_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,011   copying build/scripts-3.9/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,013   copying build/scripts-3.9/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,015   copying build/scripts-3.9/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,017   copying build/scripts-3.9/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,019   copying build/scripts-3.9/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,021   copying build/scripts-3.9/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,023   copying build/scripts-3.9/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,025   copying build/scripts-3.9/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,026   copying build/scripts-3.9/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,028   copying build/scripts-3.9/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,031   copying build/scripts-3.9/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,032   copying build/scripts-3.9/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,034   copying build/scripts-3.9/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts
2024-05-14T06:02:04,035   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_deeptools_fragmentsize.R to 755
2024-05-14T06:02:04,036   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/get_chrom_length.sh to 755
2024-05-14T06:02:04,036   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/diff_expr_DESeq2.R to 755
2024-05-14T06:02:04,036   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/remove_duplicates.sh to 755
2024-05-14T06:02:04,037   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/merge_subseq.sh to 755
2024-05-14T06:02:04,037   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_venn.R to 755
2024-05-14T06:02:04,037   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_chip_summary.R to 755
2024-05-14T06:02:04,038   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_hist.R to 755
2024-05-14T06:02:04,038   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/gtfparser.sh to 755
2024-05-14T06:02:04,038   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_peak_width.R to 755
2024-05-14T06:02:04,039   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_rep_cor.R to 755
2024-05-14T06:02:04,039   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_bar.R to 755
2024-05-14T06:02:04,039   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/diff_expr_edgeR.R to 755
2024-05-14T06:02:04,040   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_corr.R to 755
2024-05-14T06:02:04,040   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/fasta_u2t.sh to 755
2024-05-14T06:02:04,040   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/peak_anno.R to 755
2024-05-14T06:02:04,041   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/diff_expr_plot.R to 755
2024-05-14T06:02:04,041   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/fastq_len.sh to 755
2024-05-14T06:02:04,041   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/plot_FRiPs.R to 755
2024-05-14T06:02:04,042   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.data/scripts/fasta_len.sh to 755
2024-05-14T06:02:04,090   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.8.dist-info/WHEEL
2024-05-14T06:02:04,093   creating '/tmp/pip-wheel-4yfhjm8i/.tmp-8078t28b/pybiotk-1.2.8-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-05-14T06:02:04,095   adding 'pybiotk/__init__.py'
2024-05-14T06:02:04,097   adding 'pybiotk/annodb/__init__.py'
2024-05-14T06:02:04,098   adding 'pybiotk/annodb/anno.py'
2024-05-14T06:02:04,100   adding 'pybiotk/annodb/gene.py'
2024-05-14T06:02:04,102   adding 'pybiotk/annodb/merged_transcript.py'
2024-05-14T06:02:04,104   adding 'pybiotk/annodb/transcript.py'
2024-05-14T06:02:04,226   adding 'pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so'
2024-05-14T06:02:04,286   adding 'pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so'
2024-05-14T06:02:04,442   adding 'pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so'
2024-05-14T06:02:04,449   adding 'pybiotk/convert/__init__.py'
2024-05-14T06:02:04,450   adding 'pybiotk/convert/bam2fastx.py'
2024-05-14T06:02:04,451   adding 'pybiotk/convert/bampe_order_by_name.py'
2024-05-14T06:02:04,452   adding 'pybiotk/convert/bed2bedgraph.py'
2024-05-14T06:02:04,454   adding 'pybiotk/convert/fa2fastq.py'
2024-05-14T06:02:04,455   adding 'pybiotk/convert/fq2fasta.py'
2024-05-14T06:02:04,456   adding 'pybiotk/convert/gtf2bed.py'
2024-05-14T06:02:04,458   adding 'pybiotk/data/__init__.py'
2024-05-14T06:02:04,462   adding 'pybiotk/data/hg38.chrom.sizes'
2024-05-14T06:02:04,464   adding 'pybiotk/data/mm10.chrom.sizes'
2024-05-14T06:02:04,466   adding 'pybiotk/intervals/__init__.py'
2024-05-14T06:02:04,468   adding 'pybiotk/intervals/grange.py'
2024-05-14T06:02:04,470   adding 'pybiotk/intervals/merge_bed3.py'
2024-05-14T06:02:04,471   adding 'pybiotk/intervals/merge_intervals.py'
2024-05-14T06:02:04,474   adding 'pybiotk/io/__init__.py'
2024-05-14T06:02:04,476   adding 'pybiotk/io/bam.py'
2024-05-14T06:02:04,478   adding 'pybiotk/io/bed.py'
2024-05-14T06:02:04,480   adding 'pybiotk/io/bw.py'
2024-05-14T06:02:04,482   adding 'pybiotk/io/fasta.py'
2024-05-14T06:02:04,484   adding 'pybiotk/io/fastq.py'
2024-05-14T06:02:04,487   adding 'pybiotk/io/gtf.py'
2024-05-14T06:02:04,489   adding 'pybiotk/string/__init__.py'
2024-05-14T06:02:04,491   adding 'pybiotk/string/motif.py'
2024-05-14T06:02:04,492   adding 'pybiotk/string/sequence.py'
2024-05-14T06:02:04,495   adding 'pybiotk/utils/__init__.py'
2024-05-14T06:02:04,497   adding 'pybiotk/utils/bam_random.py'
2024-05-14T06:02:04,498   adding 'pybiotk/utils/bigwigfetcher.py'
2024-05-14T06:02:04,500   adding 'pybiotk/utils/ercc_parser.py'
2024-05-14T06:02:04,502   adding 'pybiotk/utils/fasta_filter.py'
2024-05-14T06:02:04,504   adding 'pybiotk/utils/fastq_join.py'
2024-05-14T06:02:04,506   adding 'pybiotk/utils/fastq_uniq.py'
2024-05-14T06:02:04,507   adding 'pybiotk/utils/fastx_rename.py'
2024-05-14T06:02:04,509   adding 'pybiotk/utils/fragment_size.py'
2024-05-14T06:02:04,511   adding 'pybiotk/utils/genomefetcher.py'
2024-05-14T06:02:04,513   adding 'pybiotk/utils/gtf_filter.py'
2024-05-14T06:02:04,515   adding 'pybiotk/utils/merge_row.py'
2024-05-14T06:02:04,517   adding 'pybiotk/utils/merge_subseq.py'
2024-05-14T06:02:04,519   adding 'pybiotk/utils/normalize.py'
2024-05-14T06:02:04,521   adding 'pybiotk/utils/pyanno.py'
2024-05-14T06:02:04,523   adding 'pybiotk/utils/read_tables.py'
2024-05-14T06:02:04,525   adding 'pybiotk/utils/reference_count.py'
2024-05-14T06:02:04,527   adding 'pybiotk/utils/reverse_fastx.py'
2024-05-14T06:02:04,528   adding 'pybiotk/utils/rmats_filter.py'
2024-05-14T06:02:04,530   adding 'pybiotk/utils/seq_random.py'
2024-05-14T06:02:04,532   adding 'pybiotk/utils/subseq_analysis.py'
2024-05-14T06:02:04,535   adding 'pybiotk/utils/summary_log.py'
2024-05-14T06:02:04,537   adding 'pybiotk/utils/utils.py'
2024-05-14T06:02:04,541   adding 'pybiotk-1.2.8.data/scripts/diff_expr_DESeq2.R'
2024-05-14T06:02:04,543   adding 'pybiotk-1.2.8.data/scripts/diff_expr_edgeR.R'
2024-05-14T06:02:04,546   adding 'pybiotk-1.2.8.data/scripts/diff_expr_plot.R'
2024-05-14T06:02:04,548   adding 'pybiotk-1.2.8.data/scripts/fasta_len.sh'
2024-05-14T06:02:04,549   adding 'pybiotk-1.2.8.data/scripts/fasta_u2t.sh'
2024-05-14T06:02:04,551   adding 'pybiotk-1.2.8.data/scripts/fastq_len.sh'
2024-05-14T06:02:04,552   adding 'pybiotk-1.2.8.data/scripts/get_chrom_length.sh'
2024-05-14T06:02:04,554   adding 'pybiotk-1.2.8.data/scripts/gtfparser.sh'
2024-05-14T06:02:04,556   adding 'pybiotk-1.2.8.data/scripts/merge_subseq.sh'
2024-05-14T06:02:04,557   adding 'pybiotk-1.2.8.data/scripts/peak_anno.R'
2024-05-14T06:02:04,559   adding 'pybiotk-1.2.8.data/scripts/plot_FRiPs.R'
2024-05-14T06:02:04,560   adding 'pybiotk-1.2.8.data/scripts/plot_bar.R'
2024-05-14T06:02:04,561   adding 'pybiotk-1.2.8.data/scripts/plot_chip_summary.R'
2024-05-14T06:02:04,563   adding 'pybiotk-1.2.8.data/scripts/plot_corr.R'
2024-05-14T06:02:04,564   adding 'pybiotk-1.2.8.data/scripts/plot_deeptools_fragmentsize.R'
2024-05-14T06:02:04,565   adding 'pybiotk-1.2.8.data/scripts/plot_hist.R'
2024-05-14T06:02:04,567   adding 'pybiotk-1.2.8.data/scripts/plot_peak_width.R'
2024-05-14T06:02:04,568   adding 'pybiotk-1.2.8.data/scripts/plot_rep_cor.R'
2024-05-14T06:02:04,569   adding 'pybiotk-1.2.8.data/scripts/plot_venn.R'
2024-05-14T06:02:04,571   adding 'pybiotk-1.2.8.data/scripts/remove_duplicates.sh'
2024-05-14T06:02:04,573   adding 'stream/__init__.py'
2024-05-14T06:02:04,575   adding 'stream/pipe.py'
2024-05-14T06:02:04,577   adding 'stream/stream.py'
2024-05-14T06:02:04,578   adding 'pybiotk-1.2.8.dist-info/LICENSE.txt'
2024-05-14T06:02:04,579   adding 'pybiotk-1.2.8.dist-info/METADATA'
2024-05-14T06:02:04,580   adding 'pybiotk-1.2.8.dist-info/WHEEL'
2024-05-14T06:02:04,581   adding 'pybiotk-1.2.8.dist-info/entry_points.txt'
2024-05-14T06:02:04,582   adding 'pybiotk-1.2.8.dist-info/top_level.txt'
2024-05-14T06:02:04,584   adding 'pybiotk-1.2.8.dist-info/RECORD'
2024-05-14T06:02:04,599   removing build/bdist.linux-armv7l/wheel
2024-05-14T06:02:04,751   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2024-05-14T06:02:04,771   Created wheel for pybiotk: filename=pybiotk-1.2.8-cp39-cp39-linux_armv7l.whl size=704228 sha256=91085e513c89bf8d3d6e698af268ffcb3e7b08fdf9737b17f8e9c1f1f83dc708
2024-05-14T06:02:04,773   Stored in directory: /tmp/pip-ephem-wheel-cache-0ntmzxg8/wheels/c4/74/55/cd44c37dd3aa17c322c8e69a3770126fe4a1802ec433bd1431
2024-05-14T06:02:04,787 Successfully built pybiotk
2024-05-14T06:02:04,811 Removed build tracker: '/tmp/pip-build-tracker-o0brak3y'