2024-05-15T15:28:45,827 Created temporary directory: /tmp/pip-build-tracker-44drg0hn 2024-05-15T15:28:45,828 Initialized build tracking at /tmp/pip-build-tracker-44drg0hn 2024-05-15T15:28:45,829 Created build tracker: /tmp/pip-build-tracker-44drg0hn 2024-05-15T15:28:45,829 Entered build tracker: /tmp/pip-build-tracker-44drg0hn 2024-05-15T15:28:45,830 Created temporary directory: /tmp/pip-wheel-5nuy16ni 2024-05-15T15:28:45,833 Created temporary directory: /tmp/pip-ephem-wheel-cache-2xjscg86 2024-05-15T15:28:45,859 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-15T15:28:45,862 2 location(s) to search for versions of multiqc: 2024-05-15T15:28:45,862 * https://pypi.org/simple/multiqc/ 2024-05-15T15:28:45,862 * https://www.piwheels.org/simple/multiqc/ 2024-05-15T15:28:45,863 Fetching project page and analyzing links: https://pypi.org/simple/multiqc/ 2024-05-15T15:28:45,863 Getting page https://pypi.org/simple/multiqc/ 2024-05-15T15:28:45,865 Found index url https://pypi.org/simple/ 2024-05-15T15:28:46,079 Fetched page https://pypi.org/simple/multiqc/ as application/vnd.pypi.simple.v1+json 2024-05-15T15:28:46,089 Found link https://files.pythonhosted.org/packages/44/ae/59e74780d4c66afbbac9053d2b6b0f12aaef94e4ce92cb00b71a20025098/multiqc-0.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.1 2024-05-15T15:28:46,089 Found link https://files.pythonhosted.org/packages/e9/7c/14ca085189df0aaba25054bf42fe3ceb74bcbee5c271d4c6f9c9c39bf1c0/multiqc-0.2.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.2.0 2024-05-15T15:28:46,090 Found link https://files.pythonhosted.org/packages/5d/cd/08627e78e84acc038dcab2ee6403af9eca73b1203fe505645a2c33c316b0/multiqc-0.3.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.0 2024-05-15T15:28:46,091 Found link https://files.pythonhosted.org/packages/47/bb/3339d0a27891c241de1bcc76122e779b67efad072140224a02e8700e5199/multiqc-0.3.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.1 2024-05-15T15:28:46,091 Found link https://files.pythonhosted.org/packages/e5/56/76229fca10700a78fe4a51baf2de7385509a48c7d281f42d9d311a547d76/multiqc-0.3.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.2 2024-05-15T15:28:46,092 Found link https://files.pythonhosted.org/packages/1c/e0/1e14407025dd461f1917354af543dcd912b669729ce77e0e0d29879d146e/multiqc-0.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.4 2024-05-15T15:28:46,093 Found link https://files.pythonhosted.org/packages/08/1c/d9833670aee1303332713f456140730a7a8335cc97bc7aa3c67f37a3b0e1/multiqc-0.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.5 2024-05-15T15:28:46,093 Found link https://files.pythonhosted.org/packages/23/d9/95a5e62eea95f220007d7a6683d0da1ee1d9f99e6932bcff793b6601ef15/multiqc-0.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.6 2024-05-15T15:28:46,094 Found link https://files.pythonhosted.org/packages/6b/b7/839b0c84448856bd3b2e8c381c4778c4b9c22ded890881d1cd12f9e686fa/multiqc-0.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.7 2024-05-15T15:28:46,095 Found link https://files.pythonhosted.org/packages/ab/e4/9a9eea1facbc3dcb7c90e38d3719eea43d4877aa54a887726982f1ba1671/multiqc-0.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.8 2024-05-15T15:28:46,095 Found link https://files.pythonhosted.org/packages/ca/7b/b65089cad82caa2618298482c6c80967bb22aca5f64a50df91f0a2888172/multiqc-0.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.9 2024-05-15T15:28:46,096 Found link https://files.pythonhosted.org/packages/61/79/92c1b7d04f87bf70405cbcd24ae059abd509b19b13b469934125311dbf9f/multiqc-1.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.0 2024-05-15T15:28:46,097 Found link https://files.pythonhosted.org/packages/a0/7c/bb475d750a39917218d48fd592be147bbe47f76f6afaeda84e350bd973fb/multiqc-1.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.1 2024-05-15T15:28:46,097 Found link https://files.pythonhosted.org/packages/7e/c5/5b7e713b892ceadfdb23afe74acd9f246298f880fa96a304276a235422b4/multiqc-1.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.2 2024-05-15T15:28:46,098 Found link https://files.pythonhosted.org/packages/2c/af/1183857d4f2ade150fb2e22282ff11e6f5355419d129ca4ee7200022177f/multiqc-1.3.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.3 2024-05-15T15:28:46,099 Found link https://files.pythonhosted.org/packages/af/a1/5c5702c4b0ce9ee6fb7d1c982cc6f20832a85bfce184dcb8178f0bdcb5df/multiqc-1.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.4 2024-05-15T15:28:46,099 Found link https://files.pythonhosted.org/packages/fa/3e/fbdcbaebadad2110eed3b4212ced58617cbd9badbfc728c5eabc53916b84/multiqc-1.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.5 2024-05-15T15:28:46,100 Found link https://files.pythonhosted.org/packages/0c/00/1fd8c0cc80531bf51a1a2b15928a408b0e8a442a6e59236edc2a76371284/multiqc-1.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.6 2024-05-15T15:28:46,100 Found link https://files.pythonhosted.org/packages/6b/c7/817d8ef024866e00625d94bbfa26e7a4131eedc166b3d65d7f54ebc90ed6/multiqc-1.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.7 2024-05-15T15:28:46,101 Found link https://files.pythonhosted.org/packages/d3/4b/1cf18ef697e5daa72dfa55d496167354e6ec7d78e87c696a52f338c2dc63/multiqc-1.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.8 2024-05-15T15:28:46,101 Found link https://files.pythonhosted.org/packages/c8/2d/f0a6be15f861c5d165726d7afecd823ca158dff530b566379623a0e4534b/multiqc-1.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.9 2024-05-15T15:28:46,102 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/35/e5/dfccaa54058f2f5d2a83176bfee12ca65d631dba5dadda2a0c52ce25c45f/multiqc-1.10-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,103 Found link https://files.pythonhosted.org/packages/4e/39/cd87ee0581ead995b561635106d47cc9593687a76db9745a093d09fff1d9/multiqc-1.10.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10 2024-05-15T15:28:46,103 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/87/80/2e648984b8080fd65cb7c8eaa948a90ce74e8391828e6f7bdd4d0d137242/multiqc-1.10.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,104 Found link https://files.pythonhosted.org/packages/ca/e7/549a185924157e427b951ac741c1312ee4b324be9585ad323617bb3077a4/multiqc-1.10.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10.1 2024-05-15T15:28:46,104 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/2e/2a/4332775300481391ea5a7a1f35406f83f5812a2734eff5987c462c7e1ec7/multiqc-1.11-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,105 Found link https://files.pythonhosted.org/packages/22/23/3f94ffb423762201bcccf0e0cbf821fccf75673a9fedfb3e7c7ea491024d/multiqc-1.11.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.11 2024-05-15T15:28:46,105 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/08/74/23d79b7df154d5742e5b25b9cdf3cc352445290d90c7cc5fb770ba9911a4/multiqc-1.12-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,106 Found link https://files.pythonhosted.org/packages/6a/f0/122025f4521fd085c07d7a706f08819b4c6bed9e62cfe99453f8c5968ab9/multiqc-1.12.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.12 2024-05-15T15:28:46,106 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/1a/37/35f769e2be82ba3760a62a1cb39af42beee5334efa40cc7e151626e03c91/multiqc-1.13-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,107 Found link https://files.pythonhosted.org/packages/7b/cd/cbd2df3bf899f79ec4b20d5807262dfd3b6ce02245e852ece8dcdad250b1/multiqc-1.13.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.13 2024-05-15T15:28:46,108 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/11/4c/0f85a278cd37406f195115e38281478e9933c50f389b7c4d989af42cb9d1/multiqc-1.14-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,108 Found link https://files.pythonhosted.org/packages/ae/bb/3cb9d23ba28eb96a479161230626e3a11a04fc99899ac341ec949bc38bcb/multiqc-1.14.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.14 2024-05-15T15:28:46,109 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/65/cd/ef0884f0abb38c9662b11f212f463cdb022ef504c512719ccf13d4c728eb/multiqc-1.15-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,110 Found link https://files.pythonhosted.org/packages/ff/96/4ea623b57fef48f6b6c0a89757d53f7b4482b1ab950501617177d5c4a979/multiqc-1.15.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.15 2024-05-15T15:28:46,110 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/e0/6b/f6b8380c75a069c079c7b60b17d1cc0ec1c67a3c9623cfe4ee41a73fa9b4/multiqc-1.16-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,111 Found link https://files.pythonhosted.org/packages/36/3d/cc530c0cdd5c9dfd4e197c8147efa69c7da18023e8ef23d6daba4ac4e13c/multiqc-1.16.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.16 2024-05-15T15:28:46,111 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/a1/a5/2ee5d2546f04ef6addd930de9b772a6ee32151d4632319cde64aef822d50/multiqc-1.17-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,112 Found link https://files.pythonhosted.org/packages/e9/0d/2fc684e101ec6ce82ea5c1eaad1a0ab202fd08f50bee5847ef9e8168b7ad/multiqc-1.17.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.17 2024-05-15T15:28:46,112 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/ec/28/0e526e176fde109e06f0409e940e10893bc2e6e7d5cf91a44a3cf8ea214e/multiqc-1.18-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,113 Found link https://files.pythonhosted.org/packages/a5/17/6ed4268d6bc06489add671e5acbb7d429c97b99391b20d964689044cda77/multiqc-1.18.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.18 2024-05-15T15:28:46,113 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/d6/89/c164b49532afaf3308f809de48c519108592d0b204e368dca2a93b1b956b/multiqc-1.19-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,114 Found link https://files.pythonhosted.org/packages/1d/7c/0b3882a0916151b7877faef0f80ca403e1a7f4fc82b875b2dca32cdb8b89/multiqc-1.19.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.19 2024-05-15T15:28:46,114 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/6e/38/ec1edb7d5337c1bf4763e7ef0bb167ce14802742dff618a2fad3f251fb84/multiqc-1.20-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-15T15:28:46,115 Found link https://files.pythonhosted.org/packages/8c/c2/6016a7cb33e904a2637da26065a45198f8ed88bc9461d30a177c130360f8/multiqc-1.20.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.20 2024-05-15T15:28:46,116 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/05/93/f3d9efa1c949050e73a504e350a2f399bcc6c7db30e132e7469ce30cc36c/multiqc-1.21-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-15T15:28:46,116 Found link https://files.pythonhosted.org/packages/d7/4a/69fa3d76fb71a50c3f0f22a5b4d3fd6db3956f631862804f6524b66122d6/multiqc-1.21.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.21 2024-05-15T15:28:46,117 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/81/bc/5780dd13065676e4b1befca4345e18734a71ebc4f11db0cc1b4b3f325c36/multiqc-1.22-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-15T15:28:46,118 Found link https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22 2024-05-15T15:28:46,119 Fetching project page and analyzing links: https://www.piwheels.org/simple/multiqc/ 2024-05-15T15:28:46,120 Getting page https://www.piwheels.org/simple/multiqc/ 2024-05-15T15:28:46,121 Found index url https://www.piwheels.org/simple/ 2024-05-15T15:28:46,286 Fetched page https://www.piwheels.org/simple/multiqc/ as text/html 2024-05-15T15:28:46,295 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.21-py3-none-any.whl#sha256=66bad70b6b309118590096feb58c3855aa0a646c5828d5162776b3e954dcabb0 (from https://www.piwheels.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-15T15:28:46,296 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.20-py3-none-any.whl#sha256=761b9ace340a048c13c61645e020f0afe3284e1d4bace8fca65fc45c560ccd12 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,296 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.19-py3-none-any.whl#sha256=95392f476f57d4e6409a8840c07548b80fa1ad6a914ec4fd1f0d5ba4674c1f4b (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,297 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.18-py3-none-any.whl#sha256=6571d2a944e15103a4d824a1bada8a8d1d11a5369665b0bcebd80bdb402dac7a (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,297 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.17-py3-none-any.whl#sha256=3dc28a2d049c186d903291a1db4451f0a5a8fef09e66e057baf0acd6179e6263 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,297 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.16-py3-none-any.whl#sha256=03cca6a0517a1d55a342d26623de81f9cac003da50a6fe2e9e8450ce798ec2fa (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,298 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.15-py3-none-any.whl#sha256=b8e2124a3861980ad09b76cddb6765026adbbccf6744750bede1e09f8a938cb5 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,298 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.14-py3-none-any.whl#sha256=77b5c82fcefdd31644526d308c1eb7b7089ad0603a489df6c628cfe8643aa301 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,299 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.13-py3-none-any.whl#sha256=6d6952eddd313ed10111a2a56abf5421e4418808c270c772f6f35ec7523f0976 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,299 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.12-py3-none-any.whl#sha256=67987570ac064a0c09bb6a22e69589384484762af8cac9e4a688f51522a4e8a3 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,300 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.11-py3-none-any.whl#sha256=b2ea91646a12c0e31df6f5d29509d6ab0e371916b55d7f35b3e3a03bdcc0ef3d (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,300 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.10.1-py3-none-any.whl#sha256=213b2a50f377d47c3203aadbe59374e5f392ed700c3c8b99b25a321c6504433b (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,301 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.10-py3-none-any.whl#sha256=d50081f549cebbfd77e5ee016efc19d9860e63e14faac945bebb55707bdcde8d (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,301 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.9-py3-none-any.whl#sha256=28cad8bafce03a40b71bffb8c9d6b0a91b46db72750069b4b2a4760650a1e7ab (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,302 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.8-py3-none-any.whl#sha256=5c1de3fffcfc9ff6ae686c8b47b1bcc3eeab0bcb6ec104fdafbc920c4861fbb7 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,302 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.7-py3-none-any.whl#sha256=78412742db690568f7481fd2e021dc148be2862519e3f193d20cbf957e6f0338 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,303 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.6-py3-none-any.whl#sha256=e1600e93d93041641028f3364fa493f6f35a7b765d5f0aafd73089ace6f062e6 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,303 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.5-py3-none-any.whl#sha256=18ee8675a1f316d459b91049c42fde5061c6ae863063408fa063a4ecbeb0d527 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,304 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.4-py3-none-any.whl#sha256=02e593c71a8c2ed237d3f0138051b8e8c7f7f7c018ecc51b0cf46a17ad8c3f7f (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,304 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.3-py3-none-any.whl#sha256=780ff22fadd86cb81d9afe67c858e478ada911ed296d7d3f430a1da03059f96f (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,305 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.2-py3-none-any.whl#sha256=a2d3ab5bfec00fcaeb2b6b02477683cb026b7e803238094f6ba5706e9911e5db (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,305 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.1-py3-none-any.whl#sha256=17b18b185ba21595f7b6ab85364b590b11f5b90666bedd3fef8779d986b8783b (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,306 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.0-py3-none-any.whl#sha256=24119737c52e447f7913e17ef08e0a0e7218dd10ac535aa8eddb5181906eca44 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,306 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.9-py3-none-any.whl#sha256=8e08076a99a715a117ba6a56d8d23be94585467dff12235fde06aa32894f3588 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,306 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.8-py3-none-any.whl#sha256=24d31f7b916c4c11cb816a515f858d222d26027a5938cef4f0c3f52ad37e3329 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,307 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.7-py3-none-any.whl#sha256=27df9fe1e307b2b16f157f3a1548b69b44f18346fdd66794327008ade6ab90db (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,308 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.6-py3-none-any.whl#sha256=14044c5aa5f26ae68a9f1c47423f113e7a0d3e95d5b16dd4dcad1df4f7621982 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,308 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.5-py3-none-any.whl#sha256=5528eef1c13487a576717815ce7548964978e93f4668d414eb835d0267cd84ff (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,309 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.4-py3-none-any.whl#sha256=f67c3af42d83144411f956e962f736ef90b3e1946dd279ae47720a5142dd9a23 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,309 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.2-py3-none-any.whl#sha256=ca3e9c65ab5f1290d0e5ce999ac078ec0b75633ac8b64bc38f79d41a442f0147 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,310 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.1-py3-none-any.whl#sha256=e3fcc96c755277a57d0e7b1b8fac3256ff45b164d7a77655e169f54983470565 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,310 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.0-py3-none-any.whl#sha256=d1c8d281f8a75ded36ccdafbc131072a3ee9a5ddd896d32dd22f9945141a6b12 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,310 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.2.0-py3-none-any.whl#sha256=1ec95a9f8508ed8aee9eb0c6f7f3f77f6d477bf1405395854a1e2a1d2b5ea053 (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,311 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.1-py3-none-any.whl#sha256=aadbe1a0321716289d4557925ecb20ef7bb769a99c42ac213284f8c0af4eb0ea (from https://www.piwheels.org/simple/multiqc/) 2024-05-15T15:28:46,311 Skipping link: not a file: https://www.piwheels.org/simple/multiqc/ 2024-05-15T15:28:46,312 Skipping link: not a file: https://pypi.org/simple/multiqc/ 2024-05-15T15:28:46,334 Given no hashes to check 1 links for project 'multiqc': discarding no candidates 2024-05-15T15:28:46,352 Collecting multiqc==1.22 2024-05-15T15:28:46,354 Created temporary directory: /tmp/pip-unpack-5mpojt4q 2024-05-15T15:28:46,573 Downloading multiqc-1.22.tar.gz (4.2 MB) 2024-05-15T15:28:49,278 Added multiqc==1.22 from https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz to build tracker '/tmp/pip-build-tracker-44drg0hn' 2024-05-15T15:28:49,289 Created temporary directory: /tmp/pip-build-env-erqacd57 2024-05-15T15:28:49,293 Installing build dependencies: started 2024-05-15T15:28:49,294 Running command pip subprocess to install build dependencies 2024-05-15T15:28:50,454 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-15T15:28:50,962 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-15T15:28:52,418 Collecting setuptools 2024-05-15T15:28:52,436 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-05-15T15:28:55,077 Installing collected packages: setuptools 2024-05-15T15:28:57,490 Successfully installed setuptools-69.5.1 2024-05-15T15:28:57,994 Installing build dependencies: finished with status 'done' 2024-05-15T15:28:57,998 Getting requirements to build wheel: started 2024-05-15T15:28:57,999 Running command Getting requirements to build wheel 2024-05-15T15:28:58,777 running egg_info 2024-05-15T15:28:58,781 writing multiqc.egg-info/PKG-INFO 2024-05-15T15:28:58,787 writing dependency_links to multiqc.egg-info/dependency_links.txt 2024-05-15T15:28:58,794 writing entry points to multiqc.egg-info/entry_points.txt 2024-05-15T15:28:58,797 writing requirements to multiqc.egg-info/requires.txt 2024-05-15T15:28:58,799 writing top-level names to multiqc.egg-info/top_level.txt 2024-05-15T15:28:58,813 reading manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-15T15:28:58,892 reading manifest template 'MANIFEST.in' 2024-05-15T15:28:59,184 adding license file 'LICENSE' 2024-05-15T15:28:59,208 writing manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-15T15:28:59,324 Getting requirements to build wheel: finished with status 'done' 2024-05-15T15:28:59,331 Installing backend dependencies: started 2024-05-15T15:28:59,333 Running command pip subprocess to install backend dependencies 2024-05-15T15:29:00,468 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-15T15:29:00,982 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-15T15:29:01,475 Collecting wheel 2024-05-15T15:29:01,553 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-05-15T15:29:03,813 Installing collected packages: wheel 2024-05-15T15:29:04,037 Creating /tmp/pip-build-env-erqacd57/normal/local/bin 2024-05-15T15:29:04,039 changing mode of /tmp/pip-build-env-erqacd57/normal/local/bin/wheel to 755 2024-05-15T15:29:04,051 Successfully installed wheel-0.43.0 2024-05-15T15:29:04,511 Installing backend dependencies: finished with status 'done' 2024-05-15T15:29:04,513 Created temporary directory: /tmp/pip-modern-metadata-agn8fmmb 2024-05-15T15:29:04,515 Preparing metadata (pyproject.toml): started 2024-05-15T15:29:04,516 Running command Preparing metadata (pyproject.toml) 2024-05-15T15:29:05,316 running dist_info 2024-05-15T15:29:05,321 creating /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info 2024-05-15T15:29:05,325 writing /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/PKG-INFO 2024-05-15T15:29:05,331 writing dependency_links to /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/dependency_links.txt 2024-05-15T15:29:05,338 writing entry points to /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/entry_points.txt 2024-05-15T15:29:05,341 writing requirements to /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/requires.txt 2024-05-15T15:29:05,342 writing top-level names to /tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/top_level.txt 2024-05-15T15:29:05,343 writing manifest file '/tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/SOURCES.txt' 2024-05-15T15:29:05,357 reading manifest file '/tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/SOURCES.txt' 2024-05-15T15:29:05,360 reading manifest template 'MANIFEST.in' 2024-05-15T15:29:05,587 adding license file 'LICENSE' 2024-05-15T15:29:05,605 writing manifest file '/tmp/pip-modern-metadata-agn8fmmb/multiqc.egg-info/SOURCES.txt' 2024-05-15T15:29:05,607 creating '/tmp/pip-modern-metadata-agn8fmmb/multiqc-1.22.dist-info' 2024-05-15T15:29:05,771 Preparing metadata (pyproject.toml): finished with status 'done' 2024-05-15T15:29:05,781 Source in /tmp/pip-wheel-5nuy16ni/multiqc_b6fc91aec17e44c3b46cba42086d884a has version 1.22, which satisfies requirement multiqc==1.22 from https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz 2024-05-15T15:29:05,782 Removed multiqc==1.22 from https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz from build tracker '/tmp/pip-build-tracker-44drg0hn' 2024-05-15T15:29:05,801 Created temporary directory: /tmp/pip-unpack-n52hu9oh 2024-05-15T15:29:05,802 Created temporary directory: /tmp/pip-unpack-ib1_r3wt 2024-05-15T15:29:05,844 Building wheels for collected packages: multiqc 2024-05-15T15:29:05,848 Created temporary directory: /tmp/pip-wheel-7sz_hjph 2024-05-15T15:29:05,849 Destination directory: /tmp/pip-wheel-7sz_hjph 2024-05-15T15:29:05,851 Building wheel for multiqc (pyproject.toml): started 2024-05-15T15:29:05,852 Running command Building wheel for multiqc (pyproject.toml) 2024-05-15T15:29:06,613 running bdist_wheel 2024-05-15T15:29:06,629 running build 2024-05-15T15:29:06,630 running build_py 2024-05-15T15:29:06,634 creating build 2024-05-15T15:29:06,634 creating build/lib 2024-05-15T15:29:06,635 creating build/lib/multiqc 2024-05-15T15:29:06,636 copying multiqc/report.py -> build/lib/multiqc 2024-05-15T15:29:06,639 copying multiqc/base_module.py -> build/lib/multiqc 2024-05-15T15:29:06,642 copying multiqc/interactive.py -> build/lib/multiqc 2024-05-15T15:29:06,644 copying multiqc/__main__.py -> build/lib/multiqc 2024-05-15T15:29:06,646 copying multiqc/config.py -> build/lib/multiqc 2024-05-15T15:29:06,649 copying multiqc/multiqc.py -> build/lib/multiqc 2024-05-15T15:29:06,651 copying multiqc/__init__.py -> build/lib/multiqc 2024-05-15T15:29:06,653 running egg_info 2024-05-15T15:29:06,656 writing multiqc.egg-info/PKG-INFO 2024-05-15T15:29:06,662 writing dependency_links to multiqc.egg-info/dependency_links.txt 2024-05-15T15:29:06,669 writing entry points to multiqc.egg-info/entry_points.txt 2024-05-15T15:29:06,671 writing requirements to multiqc.egg-info/requires.txt 2024-05-15T15:29:06,672 writing top-level names to multiqc.egg-info/top_level.txt 2024-05-15T15:29:06,679 reading manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-15T15:29:06,692 reading manifest template 'MANIFEST.in' 2024-05-15T15:29:06,926 adding license file 'LICENSE' 2024-05-15T15:29:06,949 writing manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-15T15:29:06,952 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.core' is absent from the `packages` configuration. 2024-05-15T15:29:06,953 !! 2024-05-15T15:29:06,954 ******************************************************************************** 2024-05-15T15:29:06,954 ############################ 2024-05-15T15:29:06,954 # Package would be ignored # 2024-05-15T15:29:06,955 ############################ 2024-05-15T15:29:06,955 Python recognizes 'multiqc.core' as an importable package[^1], 2024-05-15T15:29:06,956 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:06,957 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:06,957 package, please make sure that 'multiqc.core' is explicitly added 2024-05-15T15:29:06,958 to the `packages` configuration field. 2024-05-15T15:29:06,959 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:06,959 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:06,960 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:06,961 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:06,963 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:06,964 If you don't want 'multiqc.core' to be distributed and are 2024-05-15T15:29:06,965 already explicitly excluding 'multiqc.core' via 2024-05-15T15:29:06,965 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:06,966 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:06,966 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:06,967 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:06,968 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:06,970 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:06,970 even if it does not contain any `.py` files. 2024-05-15T15:29:06,970 On the other hand, currently there is no concept of package data 2024-05-15T15:29:06,971 directory, all directories are treated like packages. 2024-05-15T15:29:06,971 ******************************************************************************** 2024-05-15T15:29:06,972 !! 2024-05-15T15:29:06,973 check.warn(importable) 2024-05-15T15:29:06,973 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules' is absent from the `packages` configuration. 2024-05-15T15:29:06,974 !! 2024-05-15T15:29:06,975 ******************************************************************************** 2024-05-15T15:29:06,976 ############################ 2024-05-15T15:29:06,976 # Package would be ignored # 2024-05-15T15:29:06,977 ############################ 2024-05-15T15:29:06,978 Python recognizes 'multiqc.modules' as an importable package[^1], 2024-05-15T15:29:06,979 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:06,979 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:06,980 package, please make sure that 'multiqc.modules' is explicitly added 2024-05-15T15:29:06,980 to the `packages` configuration field. 2024-05-15T15:29:06,981 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:06,981 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:06,981 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:06,982 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:06,983 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:06,983 If you don't want 'multiqc.modules' to be distributed and are 2024-05-15T15:29:06,984 already explicitly excluding 'multiqc.modules' via 2024-05-15T15:29:06,984 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:06,984 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:06,985 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:06,986 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:06,986 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:06,988 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:06,988 even if it does not contain any `.py` files. 2024-05-15T15:29:06,989 On the other hand, currently there is no concept of package data 2024-05-15T15:29:06,989 directory, all directories are treated like packages. 2024-05-15T15:29:06,989 ******************************************************************************** 2024-05-15T15:29:06,991 !! 2024-05-15T15:29:06,991 check.warn(importable) 2024-05-15T15:29:06,992 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.adapterremoval' is absent from the `packages` configuration. 2024-05-15T15:29:06,992 !! 2024-05-15T15:29:06,993 ******************************************************************************** 2024-05-15T15:29:06,994 ############################ 2024-05-15T15:29:06,994 # Package would be ignored # 2024-05-15T15:29:06,995 ############################ 2024-05-15T15:29:06,995 Python recognizes 'multiqc.modules.adapterremoval' as an importable package[^1], 2024-05-15T15:29:06,996 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:06,997 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:06,997 package, please make sure that 'multiqc.modules.adapterremoval' is explicitly added 2024-05-15T15:29:06,997 to the `packages` configuration field. 2024-05-15T15:29:06,998 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:06,999 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:06,999 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,000 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,001 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,002 If you don't want 'multiqc.modules.adapterremoval' to be distributed and are 2024-05-15T15:29:07,003 already explicitly excluding 'multiqc.modules.adapterremoval' via 2024-05-15T15:29:07,003 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,004 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,004 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,005 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,006 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,007 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,007 even if it does not contain any `.py` files. 2024-05-15T15:29:07,008 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,008 directory, all directories are treated like packages. 2024-05-15T15:29:07,008 ******************************************************************************** 2024-05-15T15:29:07,009 !! 2024-05-15T15:29:07,009 check.warn(importable) 2024-05-15T15:29:07,010 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.afterqc' is absent from the `packages` configuration. 2024-05-15T15:29:07,010 !! 2024-05-15T15:29:07,011 ******************************************************************************** 2024-05-15T15:29:07,011 ############################ 2024-05-15T15:29:07,011 # Package would be ignored # 2024-05-15T15:29:07,012 ############################ 2024-05-15T15:29:07,012 Python recognizes 'multiqc.modules.afterqc' as an importable package[^1], 2024-05-15T15:29:07,012 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,013 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,014 package, please make sure that 'multiqc.modules.afterqc' is explicitly added 2024-05-15T15:29:07,015 to the `packages` configuration field. 2024-05-15T15:29:07,016 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,016 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,017 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,018 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,019 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,020 If you don't want 'multiqc.modules.afterqc' to be distributed and are 2024-05-15T15:29:07,021 already explicitly excluding 'multiqc.modules.afterqc' via 2024-05-15T15:29:07,021 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,022 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,022 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,023 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,024 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,025 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,026 even if it does not contain any `.py` files. 2024-05-15T15:29:07,026 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,027 directory, all directories are treated like packages. 2024-05-15T15:29:07,027 ******************************************************************************** 2024-05-15T15:29:07,029 !! 2024-05-15T15:29:07,029 check.warn(importable) 2024-05-15T15:29:07,030 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.anglerfish' is absent from the `packages` configuration. 2024-05-15T15:29:07,030 !! 2024-05-15T15:29:07,031 ******************************************************************************** 2024-05-15T15:29:07,032 ############################ 2024-05-15T15:29:07,032 # Package would be ignored # 2024-05-15T15:29:07,033 ############################ 2024-05-15T15:29:07,033 Python recognizes 'multiqc.modules.anglerfish' as an importable package[^1], 2024-05-15T15:29:07,033 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,034 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,034 package, please make sure that 'multiqc.modules.anglerfish' is explicitly added 2024-05-15T15:29:07,034 to the `packages` configuration field. 2024-05-15T15:29:07,035 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,035 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,036 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,036 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,037 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,038 If you don't want 'multiqc.modules.anglerfish' to be distributed and are 2024-05-15T15:29:07,038 already explicitly excluding 'multiqc.modules.anglerfish' via 2024-05-15T15:29:07,039 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,039 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,040 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,041 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,042 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,043 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,044 even if it does not contain any `.py` files. 2024-05-15T15:29:07,045 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,045 directory, all directories are treated like packages. 2024-05-15T15:29:07,046 ******************************************************************************** 2024-05-15T15:29:07,047 !! 2024-05-15T15:29:07,048 check.warn(importable) 2024-05-15T15:29:07,048 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bakta' is absent from the `packages` configuration. 2024-05-15T15:29:07,049 !! 2024-05-15T15:29:07,050 ******************************************************************************** 2024-05-15T15:29:07,050 ############################ 2024-05-15T15:29:07,050 # Package would be ignored # 2024-05-15T15:29:07,051 ############################ 2024-05-15T15:29:07,051 Python recognizes 'multiqc.modules.bakta' as an importable package[^1], 2024-05-15T15:29:07,052 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,053 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,053 package, please make sure that 'multiqc.modules.bakta' is explicitly added 2024-05-15T15:29:07,054 to the `packages` configuration field. 2024-05-15T15:29:07,055 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,055 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,056 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,057 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,058 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,058 If you don't want 'multiqc.modules.bakta' to be distributed and are 2024-05-15T15:29:07,059 already explicitly excluding 'multiqc.modules.bakta' via 2024-05-15T15:29:07,059 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,059 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,060 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,061 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,061 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,062 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,063 even if it does not contain any `.py` files. 2024-05-15T15:29:07,063 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,063 directory, all directories are treated like packages. 2024-05-15T15:29:07,064 ******************************************************************************** 2024-05-15T15:29:07,065 !! 2024-05-15T15:29:07,065 check.warn(importable) 2024-05-15T15:29:07,066 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bamdst' is absent from the `packages` configuration. 2024-05-15T15:29:07,066 !! 2024-05-15T15:29:07,067 ******************************************************************************** 2024-05-15T15:29:07,068 ############################ 2024-05-15T15:29:07,068 # Package would be ignored # 2024-05-15T15:29:07,069 ############################ 2024-05-15T15:29:07,069 Python recognizes 'multiqc.modules.bamdst' as an importable package[^1], 2024-05-15T15:29:07,070 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,071 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,072 package, please make sure that 'multiqc.modules.bamdst' is explicitly added 2024-05-15T15:29:07,072 to the `packages` configuration field. 2024-05-15T15:29:07,073 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,074 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,074 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,075 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,076 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,077 If you don't want 'multiqc.modules.bamdst' to be distributed and are 2024-05-15T15:29:07,078 already explicitly excluding 'multiqc.modules.bamdst' via 2024-05-15T15:29:07,078 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,079 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,079 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,080 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,081 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,083 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,083 even if it does not contain any `.py` files. 2024-05-15T15:29:07,084 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,085 directory, all directories are treated like packages. 2024-05-15T15:29:07,085 ******************************************************************************** 2024-05-15T15:29:07,086 !! 2024-05-15T15:29:07,086 check.warn(importable) 2024-05-15T15:29:07,087 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bamtools' is absent from the `packages` configuration. 2024-05-15T15:29:07,087 !! 2024-05-15T15:29:07,088 ******************************************************************************** 2024-05-15T15:29:07,088 ############################ 2024-05-15T15:29:07,088 # Package would be ignored # 2024-05-15T15:29:07,089 ############################ 2024-05-15T15:29:07,089 Python recognizes 'multiqc.modules.bamtools' as an importable package[^1], 2024-05-15T15:29:07,089 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,090 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,090 package, please make sure that 'multiqc.modules.bamtools' is explicitly added 2024-05-15T15:29:07,091 to the `packages` configuration field. 2024-05-15T15:29:07,091 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,092 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,092 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,093 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,094 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,095 If you don't want 'multiqc.modules.bamtools' to be distributed and are 2024-05-15T15:29:07,096 already explicitly excluding 'multiqc.modules.bamtools' via 2024-05-15T15:29:07,096 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,097 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,097 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,098 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,099 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,101 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,102 even if it does not contain any `.py` files. 2024-05-15T15:29:07,102 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,103 directory, all directories are treated like packages. 2024-05-15T15:29:07,103 ******************************************************************************** 2024-05-15T15:29:07,104 !! 2024-05-15T15:29:07,104 check.warn(importable) 2024-05-15T15:29:07,105 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bbduk' is absent from the `packages` configuration. 2024-05-15T15:29:07,105 !! 2024-05-15T15:29:07,106 ******************************************************************************** 2024-05-15T15:29:07,107 ############################ 2024-05-15T15:29:07,107 # Package would be ignored # 2024-05-15T15:29:07,108 ############################ 2024-05-15T15:29:07,108 Python recognizes 'multiqc.modules.bbduk' as an importable package[^1], 2024-05-15T15:29:07,109 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,110 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,110 package, please make sure that 'multiqc.modules.bbduk' is explicitly added 2024-05-15T15:29:07,111 to the `packages` configuration field. 2024-05-15T15:29:07,112 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,112 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,112 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,113 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,114 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,114 If you don't want 'multiqc.modules.bbduk' to be distributed and are 2024-05-15T15:29:07,115 already explicitly excluding 'multiqc.modules.bbduk' via 2024-05-15T15:29:07,115 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,115 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,116 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,116 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,117 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,119 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,119 even if it does not contain any `.py` files. 2024-05-15T15:29:07,120 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,120 directory, all directories are treated like packages. 2024-05-15T15:29:07,121 ******************************************************************************** 2024-05-15T15:29:07,122 !! 2024-05-15T15:29:07,122 check.warn(importable) 2024-05-15T15:29:07,123 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bbmap' is absent from the `packages` configuration. 2024-05-15T15:29:07,123 !! 2024-05-15T15:29:07,125 ******************************************************************************** 2024-05-15T15:29:07,125 ############################ 2024-05-15T15:29:07,126 # Package would be ignored # 2024-05-15T15:29:07,126 ############################ 2024-05-15T15:29:07,127 Python recognizes 'multiqc.modules.bbmap' as an importable package[^1], 2024-05-15T15:29:07,127 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,129 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,129 package, please make sure that 'multiqc.modules.bbmap' is explicitly added 2024-05-15T15:29:07,129 to the `packages` configuration field. 2024-05-15T15:29:07,130 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,131 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,131 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,132 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,133 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,134 If you don't want 'multiqc.modules.bbmap' to be distributed and are 2024-05-15T15:29:07,135 already explicitly excluding 'multiqc.modules.bbmap' via 2024-05-15T15:29:07,135 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,136 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,136 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,138 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,138 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,139 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,140 even if it does not contain any `.py` files. 2024-05-15T15:29:07,140 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,140 directory, all directories are treated like packages. 2024-05-15T15:29:07,141 ******************************************************************************** 2024-05-15T15:29:07,141 !! 2024-05-15T15:29:07,142 check.warn(importable) 2024-05-15T15:29:07,142 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bcftools' is absent from the `packages` configuration. 2024-05-15T15:29:07,142 !! 2024-05-15T15:29:07,143 ******************************************************************************** 2024-05-15T15:29:07,143 ############################ 2024-05-15T15:29:07,143 # Package would be ignored # 2024-05-15T15:29:07,144 ############################ 2024-05-15T15:29:07,144 Python recognizes 'multiqc.modules.bcftools' as an importable package[^1], 2024-05-15T15:29:07,145 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,145 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,146 package, please make sure that 'multiqc.modules.bcftools' is explicitly added 2024-05-15T15:29:07,146 to the `packages` configuration field. 2024-05-15T15:29:07,147 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,148 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,148 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,149 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,150 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,151 If you don't want 'multiqc.modules.bcftools' to be distributed and are 2024-05-15T15:29:07,152 already explicitly excluding 'multiqc.modules.bcftools' via 2024-05-15T15:29:07,152 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,153 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,154 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,155 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,155 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,157 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,157 even if it does not contain any `.py` files. 2024-05-15T15:29:07,158 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,158 directory, all directories are treated like packages. 2024-05-15T15:29:07,158 ******************************************************************************** 2024-05-15T15:29:07,159 !! 2024-05-15T15:29:07,160 check.warn(importable) 2024-05-15T15:29:07,160 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bcl2fastq' is absent from the `packages` configuration. 2024-05-15T15:29:07,161 !! 2024-05-15T15:29:07,162 ******************************************************************************** 2024-05-15T15:29:07,163 ############################ 2024-05-15T15:29:07,163 # Package would be ignored # 2024-05-15T15:29:07,164 ############################ 2024-05-15T15:29:07,164 Python recognizes 'multiqc.modules.bcl2fastq' as an importable package[^1], 2024-05-15T15:29:07,165 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,165 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,166 package, please make sure that 'multiqc.modules.bcl2fastq' is explicitly added 2024-05-15T15:29:07,166 to the `packages` configuration field. 2024-05-15T15:29:07,167 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,167 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,167 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,168 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,169 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,170 If you don't want 'multiqc.modules.bcl2fastq' to be distributed and are 2024-05-15T15:29:07,170 already explicitly excluding 'multiqc.modules.bcl2fastq' via 2024-05-15T15:29:07,170 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,171 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,171 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,172 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,173 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,175 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,175 even if it does not contain any `.py` files. 2024-05-15T15:29:07,175 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,176 directory, all directories are treated like packages. 2024-05-15T15:29:07,177 ******************************************************************************** 2024-05-15T15:29:07,178 !! 2024-05-15T15:29:07,178 check.warn(importable) 2024-05-15T15:29:07,179 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bclconvert' is absent from the `packages` configuration. 2024-05-15T15:29:07,179 !! 2024-05-15T15:29:07,180 ******************************************************************************** 2024-05-15T15:29:07,181 ############################ 2024-05-15T15:29:07,182 # Package would be ignored # 2024-05-15T15:29:07,182 ############################ 2024-05-15T15:29:07,183 Python recognizes 'multiqc.modules.bclconvert' as an importable package[^1], 2024-05-15T15:29:07,183 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,184 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,185 package, please make sure that 'multiqc.modules.bclconvert' is explicitly added 2024-05-15T15:29:07,185 to the `packages` configuration field. 2024-05-15T15:29:07,186 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,186 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,187 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,188 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,189 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,190 If you don't want 'multiqc.modules.bclconvert' to be distributed and are 2024-05-15T15:29:07,191 already explicitly excluding 'multiqc.modules.bclconvert' via 2024-05-15T15:29:07,192 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,192 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,193 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,193 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,194 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,195 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,196 even if it does not contain any `.py` files. 2024-05-15T15:29:07,196 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,196 directory, all directories are treated like packages. 2024-05-15T15:29:07,197 ******************************************************************************** 2024-05-15T15:29:07,198 !! 2024-05-15T15:29:07,198 check.warn(importable) 2024-05-15T15:29:07,198 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biobambam2' is absent from the `packages` configuration. 2024-05-15T15:29:07,199 !! 2024-05-15T15:29:07,199 ******************************************************************************** 2024-05-15T15:29:07,200 ############################ 2024-05-15T15:29:07,200 # Package would be ignored # 2024-05-15T15:29:07,201 ############################ 2024-05-15T15:29:07,201 Python recognizes 'multiqc.modules.biobambam2' as an importable package[^1], 2024-05-15T15:29:07,202 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,203 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,203 package, please make sure that 'multiqc.modules.biobambam2' is explicitly added 2024-05-15T15:29:07,204 to the `packages` configuration field. 2024-05-15T15:29:07,205 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,205 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,206 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,207 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,208 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,209 If you don't want 'multiqc.modules.biobambam2' to be distributed and are 2024-05-15T15:29:07,209 already explicitly excluding 'multiqc.modules.biobambam2' via 2024-05-15T15:29:07,210 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,210 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,211 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,212 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,212 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,214 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,215 even if it does not contain any `.py` files. 2024-05-15T15:29:07,215 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,216 directory, all directories are treated like packages. 2024-05-15T15:29:07,216 ******************************************************************************** 2024-05-15T15:29:07,217 !! 2024-05-15T15:29:07,218 check.warn(importable) 2024-05-15T15:29:07,218 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biobloomtools' is absent from the `packages` configuration. 2024-05-15T15:29:07,219 !! 2024-05-15T15:29:07,219 ******************************************************************************** 2024-05-15T15:29:07,220 ############################ 2024-05-15T15:29:07,220 # Package would be ignored # 2024-05-15T15:29:07,220 ############################ 2024-05-15T15:29:07,221 Python recognizes 'multiqc.modules.biobloomtools' as an importable package[^1], 2024-05-15T15:29:07,221 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,222 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,222 package, please make sure that 'multiqc.modules.biobloomtools' is explicitly added 2024-05-15T15:29:07,222 to the `packages` configuration field. 2024-05-15T15:29:07,223 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,223 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,224 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,224 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,225 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,226 If you don't want 'multiqc.modules.biobloomtools' to be distributed and are 2024-05-15T15:29:07,226 already explicitly excluding 'multiqc.modules.biobloomtools' via 2024-05-15T15:29:07,227 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,228 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,228 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,229 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,230 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,232 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,233 even if it does not contain any `.py` files. 2024-05-15T15:29:07,233 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,234 directory, all directories are treated like packages. 2024-05-15T15:29:07,234 ******************************************************************************** 2024-05-15T15:29:07,235 !! 2024-05-15T15:29:07,236 check.warn(importable) 2024-05-15T15:29:07,236 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biscuit' is absent from the `packages` configuration. 2024-05-15T15:29:07,237 !! 2024-05-15T15:29:07,238 ******************************************************************************** 2024-05-15T15:29:07,238 ############################ 2024-05-15T15:29:07,238 # Package would be ignored # 2024-05-15T15:29:07,239 ############################ 2024-05-15T15:29:07,239 Python recognizes 'multiqc.modules.biscuit' as an importable package[^1], 2024-05-15T15:29:07,240 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,241 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,242 package, please make sure that 'multiqc.modules.biscuit' is explicitly added 2024-05-15T15:29:07,242 to the `packages` configuration field. 2024-05-15T15:29:07,243 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,244 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,245 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,245 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,246 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,247 If you don't want 'multiqc.modules.biscuit' to be distributed and are 2024-05-15T15:29:07,247 already explicitly excluding 'multiqc.modules.biscuit' via 2024-05-15T15:29:07,247 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,248 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,248 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,249 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,250 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,251 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,251 even if it does not contain any `.py` files. 2024-05-15T15:29:07,251 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,252 directory, all directories are treated like packages. 2024-05-15T15:29:07,252 ******************************************************************************** 2024-05-15T15:29:07,253 !! 2024-05-15T15:29:07,254 check.warn(importable) 2024-05-15T15:29:07,254 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bismark' is absent from the `packages` configuration. 2024-05-15T15:29:07,255 !! 2024-05-15T15:29:07,256 ******************************************************************************** 2024-05-15T15:29:07,257 ############################ 2024-05-15T15:29:07,257 # Package would be ignored # 2024-05-15T15:29:07,258 ############################ 2024-05-15T15:29:07,258 Python recognizes 'multiqc.modules.bismark' as an importable package[^1], 2024-05-15T15:29:07,259 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,260 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,261 package, please make sure that 'multiqc.modules.bismark' is explicitly added 2024-05-15T15:29:07,261 to the `packages` configuration field. 2024-05-15T15:29:07,262 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,263 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,263 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,264 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,265 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,266 If you don't want 'multiqc.modules.bismark' to be distributed and are 2024-05-15T15:29:07,267 already explicitly excluding 'multiqc.modules.bismark' via 2024-05-15T15:29:07,267 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,268 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,269 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,270 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,271 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,273 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,273 even if it does not contain any `.py` files. 2024-05-15T15:29:07,273 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,274 directory, all directories are treated like packages. 2024-05-15T15:29:07,274 ******************************************************************************** 2024-05-15T15:29:07,275 !! 2024-05-15T15:29:07,275 check.warn(importable) 2024-05-15T15:29:07,276 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bowtie1' is absent from the `packages` configuration. 2024-05-15T15:29:07,276 !! 2024-05-15T15:29:07,277 ******************************************************************************** 2024-05-15T15:29:07,277 ############################ 2024-05-15T15:29:07,277 # Package would be ignored # 2024-05-15T15:29:07,278 ############################ 2024-05-15T15:29:07,278 Python recognizes 'multiqc.modules.bowtie1' as an importable package[^1], 2024-05-15T15:29:07,278 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,279 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,279 package, please make sure that 'multiqc.modules.bowtie1' is explicitly added 2024-05-15T15:29:07,280 to the `packages` configuration field. 2024-05-15T15:29:07,281 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,281 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,282 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,283 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,285 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,286 If you don't want 'multiqc.modules.bowtie1' to be distributed and are 2024-05-15T15:29:07,287 already explicitly excluding 'multiqc.modules.bowtie1' via 2024-05-15T15:29:07,287 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,288 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,289 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,290 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,291 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,293 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,294 even if it does not contain any `.py` files. 2024-05-15T15:29:07,294 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,295 directory, all directories are treated like packages. 2024-05-15T15:29:07,296 ******************************************************************************** 2024-05-15T15:29:07,297 !! 2024-05-15T15:29:07,297 check.warn(importable) 2024-05-15T15:29:07,298 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bowtie2' is absent from the `packages` configuration. 2024-05-15T15:29:07,299 !! 2024-05-15T15:29:07,300 ******************************************************************************** 2024-05-15T15:29:07,301 ############################ 2024-05-15T15:29:07,301 # Package would be ignored # 2024-05-15T15:29:07,302 ############################ 2024-05-15T15:29:07,303 Python recognizes 'multiqc.modules.bowtie2' as an importable package[^1], 2024-05-15T15:29:07,303 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,305 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,305 package, please make sure that 'multiqc.modules.bowtie2' is explicitly added 2024-05-15T15:29:07,306 to the `packages` configuration field. 2024-05-15T15:29:07,307 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,307 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,307 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,308 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,309 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,310 If you don't want 'multiqc.modules.bowtie2' to be distributed and are 2024-05-15T15:29:07,311 already explicitly excluding 'multiqc.modules.bowtie2' via 2024-05-15T15:29:07,311 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,311 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,312 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,313 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,314 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,316 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,316 even if it does not contain any `.py` files. 2024-05-15T15:29:07,317 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,317 directory, all directories are treated like packages. 2024-05-15T15:29:07,318 ******************************************************************************** 2024-05-15T15:29:07,319 !! 2024-05-15T15:29:07,320 check.warn(importable) 2024-05-15T15:29:07,321 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bracken' is absent from the `packages` configuration. 2024-05-15T15:29:07,321 !! 2024-05-15T15:29:07,323 ******************************************************************************** 2024-05-15T15:29:07,323 ############################ 2024-05-15T15:29:07,324 # Package would be ignored # 2024-05-15T15:29:07,325 ############################ 2024-05-15T15:29:07,325 Python recognizes 'multiqc.modules.bracken' as an importable package[^1], 2024-05-15T15:29:07,326 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,327 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,328 package, please make sure that 'multiqc.modules.bracken' is explicitly added 2024-05-15T15:29:07,328 to the `packages` configuration field. 2024-05-15T15:29:07,329 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,330 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,330 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,332 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,333 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,334 If you don't want 'multiqc.modules.bracken' to be distributed and are 2024-05-15T15:29:07,335 already explicitly excluding 'multiqc.modules.bracken' via 2024-05-15T15:29:07,335 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,336 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,337 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,338 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,339 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,340 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,341 even if it does not contain any `.py` files. 2024-05-15T15:29:07,341 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,342 directory, all directories are treated like packages. 2024-05-15T15:29:07,342 ******************************************************************************** 2024-05-15T15:29:07,343 !! 2024-05-15T15:29:07,344 check.warn(importable) 2024-05-15T15:29:07,345 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.busco' is absent from the `packages` configuration. 2024-05-15T15:29:07,345 !! 2024-05-15T15:29:07,346 ******************************************************************************** 2024-05-15T15:29:07,347 ############################ 2024-05-15T15:29:07,347 # Package would be ignored # 2024-05-15T15:29:07,348 ############################ 2024-05-15T15:29:07,348 Python recognizes 'multiqc.modules.busco' as an importable package[^1], 2024-05-15T15:29:07,349 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,350 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,350 package, please make sure that 'multiqc.modules.busco' is explicitly added 2024-05-15T15:29:07,351 to the `packages` configuration field. 2024-05-15T15:29:07,352 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,353 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,354 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,355 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,357 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,359 If you don't want 'multiqc.modules.busco' to be distributed and are 2024-05-15T15:29:07,359 already explicitly excluding 'multiqc.modules.busco' via 2024-05-15T15:29:07,360 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,361 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,361 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,363 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,364 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,366 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,366 even if it does not contain any `.py` files. 2024-05-15T15:29:07,367 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,368 directory, all directories are treated like packages. 2024-05-15T15:29:07,368 ******************************************************************************** 2024-05-15T15:29:07,370 !! 2024-05-15T15:29:07,370 check.warn(importable) 2024-05-15T15:29:07,371 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bustools' is absent from the `packages` configuration. 2024-05-15T15:29:07,372 !! 2024-05-15T15:29:07,373 ******************************************************************************** 2024-05-15T15:29:07,373 ############################ 2024-05-15T15:29:07,374 # Package would be ignored # 2024-05-15T15:29:07,374 ############################ 2024-05-15T15:29:07,375 Python recognizes 'multiqc.modules.bustools' as an importable package[^1], 2024-05-15T15:29:07,375 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,376 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,377 package, please make sure that 'multiqc.modules.bustools' is explicitly added 2024-05-15T15:29:07,377 to the `packages` configuration field. 2024-05-15T15:29:07,378 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,379 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,379 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,380 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,381 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,382 If you don't want 'multiqc.modules.bustools' to be distributed and are 2024-05-15T15:29:07,382 already explicitly excluding 'multiqc.modules.bustools' via 2024-05-15T15:29:07,383 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,383 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,383 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,385 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,386 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,387 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,388 even if it does not contain any `.py` files. 2024-05-15T15:29:07,389 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,389 directory, all directories are treated like packages. 2024-05-15T15:29:07,390 ******************************************************************************** 2024-05-15T15:29:07,391 !! 2024-05-15T15:29:07,391 check.warn(importable) 2024-05-15T15:29:07,392 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ccs' is absent from the `packages` configuration. 2024-05-15T15:29:07,393 !! 2024-05-15T15:29:07,394 ******************************************************************************** 2024-05-15T15:29:07,394 ############################ 2024-05-15T15:29:07,395 # Package would be ignored # 2024-05-15T15:29:07,395 ############################ 2024-05-15T15:29:07,396 Python recognizes 'multiqc.modules.ccs' as an importable package[^1], 2024-05-15T15:29:07,396 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,397 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,398 package, please make sure that 'multiqc.modules.ccs' is explicitly added 2024-05-15T15:29:07,398 to the `packages` configuration field. 2024-05-15T15:29:07,399 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,400 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,401 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,402 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,403 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,404 If you don't want 'multiqc.modules.ccs' to be distributed and are 2024-05-15T15:29:07,404 already explicitly excluding 'multiqc.modules.ccs' via 2024-05-15T15:29:07,405 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,405 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,405 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,406 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,407 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,408 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,408 even if it does not contain any `.py` files. 2024-05-15T15:29:07,409 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,409 directory, all directories are treated like packages. 2024-05-15T15:29:07,409 ******************************************************************************** 2024-05-15T15:29:07,410 !! 2024-05-15T15:29:07,411 check.warn(importable) 2024-05-15T15:29:07,411 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.cellranger' is absent from the `packages` configuration. 2024-05-15T15:29:07,411 !! 2024-05-15T15:29:07,412 ******************************************************************************** 2024-05-15T15:29:07,413 ############################ 2024-05-15T15:29:07,413 # Package would be ignored # 2024-05-15T15:29:07,414 ############################ 2024-05-15T15:29:07,414 Python recognizes 'multiqc.modules.cellranger' as an importable package[^1], 2024-05-15T15:29:07,415 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,416 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,416 package, please make sure that 'multiqc.modules.cellranger' is explicitly added 2024-05-15T15:29:07,417 to the `packages` configuration field. 2024-05-15T15:29:07,418 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,419 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,419 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,420 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,421 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,422 If you don't want 'multiqc.modules.cellranger' to be distributed and are 2024-05-15T15:29:07,423 already explicitly excluding 'multiqc.modules.cellranger' via 2024-05-15T15:29:07,423 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,424 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,424 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,425 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,426 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,428 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,428 even if it does not contain any `.py` files. 2024-05-15T15:29:07,429 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,429 directory, all directories are treated like packages. 2024-05-15T15:29:07,430 ******************************************************************************** 2024-05-15T15:29:07,431 !! 2024-05-15T15:29:07,431 check.warn(importable) 2024-05-15T15:29:07,432 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.checkqc' is absent from the `packages` configuration. 2024-05-15T15:29:07,432 !! 2024-05-15T15:29:07,433 ******************************************************************************** 2024-05-15T15:29:07,433 ############################ 2024-05-15T15:29:07,434 # Package would be ignored # 2024-05-15T15:29:07,434 ############################ 2024-05-15T15:29:07,434 Python recognizes 'multiqc.modules.checkqc' as an importable package[^1], 2024-05-15T15:29:07,435 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,435 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,436 package, please make sure that 'multiqc.modules.checkqc' is explicitly added 2024-05-15T15:29:07,436 to the `packages` configuration field. 2024-05-15T15:29:07,437 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,438 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,438 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,439 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,440 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,441 If you don't want 'multiqc.modules.checkqc' to be distributed and are 2024-05-15T15:29:07,441 already explicitly excluding 'multiqc.modules.checkqc' via 2024-05-15T15:29:07,442 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,443 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,443 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,445 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,446 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,448 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,448 even if it does not contain any `.py` files. 2024-05-15T15:29:07,449 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,450 directory, all directories are treated like packages. 2024-05-15T15:29:07,450 ******************************************************************************** 2024-05-15T15:29:07,452 !! 2024-05-15T15:29:07,453 check.warn(importable) 2024-05-15T15:29:07,453 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.clipandmerge' is absent from the `packages` configuration. 2024-05-15T15:29:07,454 !! 2024-05-15T15:29:07,455 ******************************************************************************** 2024-05-15T15:29:07,456 ############################ 2024-05-15T15:29:07,456 # Package would be ignored # 2024-05-15T15:29:07,457 ############################ 2024-05-15T15:29:07,457 Python recognizes 'multiqc.modules.clipandmerge' as an importable package[^1], 2024-05-15T15:29:07,458 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,459 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,459 package, please make sure that 'multiqc.modules.clipandmerge' is explicitly added 2024-05-15T15:29:07,460 to the `packages` configuration field. 2024-05-15T15:29:07,461 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,461 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,462 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,462 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,463 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,464 If you don't want 'multiqc.modules.clipandmerge' to be distributed and are 2024-05-15T15:29:07,464 already explicitly excluding 'multiqc.modules.clipandmerge' via 2024-05-15T15:29:07,465 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,465 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,465 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,466 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,467 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,468 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,468 even if it does not contain any `.py` files. 2024-05-15T15:29:07,469 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,469 directory, all directories are treated like packages. 2024-05-15T15:29:07,469 ******************************************************************************** 2024-05-15T15:29:07,470 !! 2024-05-15T15:29:07,471 check.warn(importable) 2024-05-15T15:29:07,472 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.clusterflow' is absent from the `packages` configuration. 2024-05-15T15:29:07,472 !! 2024-05-15T15:29:07,473 ******************************************************************************** 2024-05-15T15:29:07,474 ############################ 2024-05-15T15:29:07,474 # Package would be ignored # 2024-05-15T15:29:07,475 ############################ 2024-05-15T15:29:07,475 Python recognizes 'multiqc.modules.clusterflow' as an importable package[^1], 2024-05-15T15:29:07,476 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,477 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,478 package, please make sure that 'multiqc.modules.clusterflow' is explicitly added 2024-05-15T15:29:07,478 to the `packages` configuration field. 2024-05-15T15:29:07,479 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,480 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,480 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,481 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,482 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,483 If you don't want 'multiqc.modules.clusterflow' to be distributed and are 2024-05-15T15:29:07,484 already explicitly excluding 'multiqc.modules.clusterflow' via 2024-05-15T15:29:07,484 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,485 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,485 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,486 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,488 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,489 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,489 even if it does not contain any `.py` files. 2024-05-15T15:29:07,489 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,490 directory, all directories are treated like packages. 2024-05-15T15:29:07,490 ******************************************************************************** 2024-05-15T15:29:07,491 !! 2024-05-15T15:29:07,491 check.warn(importable) 2024-05-15T15:29:07,491 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.conpair' is absent from the `packages` configuration. 2024-05-15T15:29:07,492 !! 2024-05-15T15:29:07,492 ******************************************************************************** 2024-05-15T15:29:07,493 ############################ 2024-05-15T15:29:07,493 # Package would be ignored # 2024-05-15T15:29:07,493 ############################ 2024-05-15T15:29:07,494 Python recognizes 'multiqc.modules.conpair' as an importable package[^1], 2024-05-15T15:29:07,494 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,495 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,495 package, please make sure that 'multiqc.modules.conpair' is explicitly added 2024-05-15T15:29:07,496 to the `packages` configuration field. 2024-05-15T15:29:07,497 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,497 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,498 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,499 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,500 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,501 If you don't want 'multiqc.modules.conpair' to be distributed and are 2024-05-15T15:29:07,502 already explicitly excluding 'multiqc.modules.conpair' via 2024-05-15T15:29:07,502 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,503 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,503 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,504 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,505 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,507 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,507 even if it does not contain any `.py` files. 2024-05-15T15:29:07,508 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,508 directory, all directories are treated like packages. 2024-05-15T15:29:07,508 ******************************************************************************** 2024-05-15T15:29:07,509 !! 2024-05-15T15:29:07,510 check.warn(importable) 2024-05-15T15:29:07,510 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.custom_content' is absent from the `packages` configuration. 2024-05-15T15:29:07,511 !! 2024-05-15T15:29:07,512 ******************************************************************************** 2024-05-15T15:29:07,513 ############################ 2024-05-15T15:29:07,513 # Package would be ignored # 2024-05-15T15:29:07,514 ############################ 2024-05-15T15:29:07,514 Python recognizes 'multiqc.modules.custom_content' as an importable package[^1], 2024-05-15T15:29:07,515 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,516 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,516 package, please make sure that 'multiqc.modules.custom_content' is explicitly added 2024-05-15T15:29:07,517 to the `packages` configuration field. 2024-05-15T15:29:07,518 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,518 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,518 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,519 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,520 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,520 If you don't want 'multiqc.modules.custom_content' to be distributed and are 2024-05-15T15:29:07,521 already explicitly excluding 'multiqc.modules.custom_content' via 2024-05-15T15:29:07,521 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,522 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,522 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,523 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,524 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,526 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,526 even if it does not contain any `.py` files. 2024-05-15T15:29:07,527 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,527 directory, all directories are treated like packages. 2024-05-15T15:29:07,528 ******************************************************************************** 2024-05-15T15:29:07,529 !! 2024-05-15T15:29:07,530 check.warn(importable) 2024-05-15T15:29:07,530 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.cutadapt' is absent from the `packages` configuration. 2024-05-15T15:29:07,531 !! 2024-05-15T15:29:07,532 ******************************************************************************** 2024-05-15T15:29:07,532 ############################ 2024-05-15T15:29:07,533 # Package would be ignored # 2024-05-15T15:29:07,533 ############################ 2024-05-15T15:29:07,534 Python recognizes 'multiqc.modules.cutadapt' as an importable package[^1], 2024-05-15T15:29:07,534 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,535 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,536 package, please make sure that 'multiqc.modules.cutadapt' is explicitly added 2024-05-15T15:29:07,536 to the `packages` configuration field. 2024-05-15T15:29:07,537 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,538 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,538 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,539 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,540 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,542 If you don't want 'multiqc.modules.cutadapt' to be distributed and are 2024-05-15T15:29:07,542 already explicitly excluding 'multiqc.modules.cutadapt' via 2024-05-15T15:29:07,543 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,543 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,544 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,545 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,545 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,546 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,546 even if it does not contain any `.py` files. 2024-05-15T15:29:07,547 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,547 directory, all directories are treated like packages. 2024-05-15T15:29:07,547 ******************************************************************************** 2024-05-15T15:29:07,548 !! 2024-05-15T15:29:07,548 check.warn(importable) 2024-05-15T15:29:07,549 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.damageprofiler' is absent from the `packages` configuration. 2024-05-15T15:29:07,549 !! 2024-05-15T15:29:07,550 ******************************************************************************** 2024-05-15T15:29:07,550 ############################ 2024-05-15T15:29:07,551 # Package would be ignored # 2024-05-15T15:29:07,551 ############################ 2024-05-15T15:29:07,551 Python recognizes 'multiqc.modules.damageprofiler' as an importable package[^1], 2024-05-15T15:29:07,552 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,553 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,554 package, please make sure that 'multiqc.modules.damageprofiler' is explicitly added 2024-05-15T15:29:07,554 to the `packages` configuration field. 2024-05-15T15:29:07,555 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,556 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,556 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,558 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,559 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,560 If you don't want 'multiqc.modules.damageprofiler' to be distributed and are 2024-05-15T15:29:07,560 already explicitly excluding 'multiqc.modules.damageprofiler' via 2024-05-15T15:29:07,561 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,561 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,562 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,562 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,563 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,565 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,565 even if it does not contain any `.py` files. 2024-05-15T15:29:07,566 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,566 directory, all directories are treated like packages. 2024-05-15T15:29:07,567 ******************************************************************************** 2024-05-15T15:29:07,568 !! 2024-05-15T15:29:07,569 check.warn(importable) 2024-05-15T15:29:07,569 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dedup' is absent from the `packages` configuration. 2024-05-15T15:29:07,569 !! 2024-05-15T15:29:07,570 ******************************************************************************** 2024-05-15T15:29:07,570 ############################ 2024-05-15T15:29:07,571 # Package would be ignored # 2024-05-15T15:29:07,571 ############################ 2024-05-15T15:29:07,571 Python recognizes 'multiqc.modules.dedup' as an importable package[^1], 2024-05-15T15:29:07,572 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,572 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,573 package, please make sure that 'multiqc.modules.dedup' is explicitly added 2024-05-15T15:29:07,573 to the `packages` configuration field. 2024-05-15T15:29:07,574 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,574 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,575 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,575 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,576 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,577 If you don't want 'multiqc.modules.dedup' to be distributed and are 2024-05-15T15:29:07,577 already explicitly excluding 'multiqc.modules.dedup' via 2024-05-15T15:29:07,578 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,578 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,579 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,580 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,581 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,582 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,583 even if it does not contain any `.py` files. 2024-05-15T15:29:07,583 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,584 directory, all directories are treated like packages. 2024-05-15T15:29:07,584 ******************************************************************************** 2024-05-15T15:29:07,586 !! 2024-05-15T15:29:07,586 check.warn(importable) 2024-05-15T15:29:07,587 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.deeptools' is absent from the `packages` configuration. 2024-05-15T15:29:07,587 !! 2024-05-15T15:29:07,588 ******************************************************************************** 2024-05-15T15:29:07,589 ############################ 2024-05-15T15:29:07,589 # Package would be ignored # 2024-05-15T15:29:07,590 ############################ 2024-05-15T15:29:07,590 Python recognizes 'multiqc.modules.deeptools' as an importable package[^1], 2024-05-15T15:29:07,591 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,592 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,593 package, please make sure that 'multiqc.modules.deeptools' is explicitly added 2024-05-15T15:29:07,593 to the `packages` configuration field. 2024-05-15T15:29:07,594 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,595 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,596 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,596 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,597 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,598 If you don't want 'multiqc.modules.deeptools' to be distributed and are 2024-05-15T15:29:07,598 already explicitly excluding 'multiqc.modules.deeptools' via 2024-05-15T15:29:07,598 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,599 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,599 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,600 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,600 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,601 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,602 even if it does not contain any `.py` files. 2024-05-15T15:29:07,602 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,603 directory, all directories are treated like packages. 2024-05-15T15:29:07,603 ******************************************************************************** 2024-05-15T15:29:07,604 !! 2024-05-15T15:29:07,605 check.warn(importable) 2024-05-15T15:29:07,605 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.diamond' is absent from the `packages` configuration. 2024-05-15T15:29:07,606 !! 2024-05-15T15:29:07,607 ******************************************************************************** 2024-05-15T15:29:07,607 ############################ 2024-05-15T15:29:07,608 # Package would be ignored # 2024-05-15T15:29:07,609 ############################ 2024-05-15T15:29:07,609 Python recognizes 'multiqc.modules.diamond' as an importable package[^1], 2024-05-15T15:29:07,610 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,611 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,611 package, please make sure that 'multiqc.modules.diamond' is explicitly added 2024-05-15T15:29:07,612 to the `packages` configuration field. 2024-05-15T15:29:07,613 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,614 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,614 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,615 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,616 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,617 If you don't want 'multiqc.modules.diamond' to be distributed and are 2024-05-15T15:29:07,617 already explicitly excluding 'multiqc.modules.diamond' via 2024-05-15T15:29:07,618 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,618 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,619 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,620 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,621 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,623 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,623 even if it does not contain any `.py` files. 2024-05-15T15:29:07,624 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,624 directory, all directories are treated like packages. 2024-05-15T15:29:07,625 ******************************************************************************** 2024-05-15T15:29:07,625 !! 2024-05-15T15:29:07,626 check.warn(importable) 2024-05-15T15:29:07,626 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.disambiguate' is absent from the `packages` configuration. 2024-05-15T15:29:07,627 !! 2024-05-15T15:29:07,627 ******************************************************************************** 2024-05-15T15:29:07,628 ############################ 2024-05-15T15:29:07,628 # Package would be ignored # 2024-05-15T15:29:07,628 ############################ 2024-05-15T15:29:07,629 Python recognizes 'multiqc.modules.disambiguate' as an importable package[^1], 2024-05-15T15:29:07,629 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,630 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,630 package, please make sure that 'multiqc.modules.disambiguate' is explicitly added 2024-05-15T15:29:07,630 to the `packages` configuration field. 2024-05-15T15:29:07,631 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,631 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,632 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,633 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,634 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,635 If you don't want 'multiqc.modules.disambiguate' to be distributed and are 2024-05-15T15:29:07,636 already explicitly excluding 'multiqc.modules.disambiguate' via 2024-05-15T15:29:07,637 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,637 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,638 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,639 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,640 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,642 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,642 even if it does not contain any `.py` files. 2024-05-15T15:29:07,643 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,643 directory, all directories are treated like packages. 2024-05-15T15:29:07,643 ******************************************************************************** 2024-05-15T15:29:07,645 !! 2024-05-15T15:29:07,645 check.warn(importable) 2024-05-15T15:29:07,646 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen' is absent from the `packages` configuration. 2024-05-15T15:29:07,646 !! 2024-05-15T15:29:07,647 ******************************************************************************** 2024-05-15T15:29:07,648 ############################ 2024-05-15T15:29:07,648 # Package would be ignored # 2024-05-15T15:29:07,649 ############################ 2024-05-15T15:29:07,649 Python recognizes 'multiqc.modules.dragen' as an importable package[^1], 2024-05-15T15:29:07,650 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,651 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,651 package, please make sure that 'multiqc.modules.dragen' is explicitly added 2024-05-15T15:29:07,652 to the `packages` configuration field. 2024-05-15T15:29:07,653 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,653 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,653 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,654 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,655 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,655 If you don't want 'multiqc.modules.dragen' to be distributed and are 2024-05-15T15:29:07,656 already explicitly excluding 'multiqc.modules.dragen' via 2024-05-15T15:29:07,656 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,657 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,657 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,658 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,658 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,660 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,660 even if it does not contain any `.py` files. 2024-05-15T15:29:07,661 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,661 directory, all directories are treated like packages. 2024-05-15T15:29:07,662 ******************************************************************************** 2024-05-15T15:29:07,663 !! 2024-05-15T15:29:07,663 check.warn(importable) 2024-05-15T15:29:07,664 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen_fastqc' is absent from the `packages` configuration. 2024-05-15T15:29:07,665 !! 2024-05-15T15:29:07,666 ******************************************************************************** 2024-05-15T15:29:07,667 ############################ 2024-05-15T15:29:07,667 # Package would be ignored # 2024-05-15T15:29:07,668 ############################ 2024-05-15T15:29:07,668 Python recognizes 'multiqc.modules.dragen_fastqc' as an importable package[^1], 2024-05-15T15:29:07,669 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,670 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,670 package, please make sure that 'multiqc.modules.dragen_fastqc' is explicitly added 2024-05-15T15:29:07,671 to the `packages` configuration field. 2024-05-15T15:29:07,672 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,672 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,673 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,674 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,675 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,676 If you don't want 'multiqc.modules.dragen_fastqc' to be distributed and are 2024-05-15T15:29:07,676 already explicitly excluding 'multiqc.modules.dragen_fastqc' via 2024-05-15T15:29:07,677 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,677 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,678 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,679 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,679 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,681 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,681 even if it does not contain any `.py` files. 2024-05-15T15:29:07,681 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,682 directory, all directories are treated like packages. 2024-05-15T15:29:07,682 ******************************************************************************** 2024-05-15T15:29:07,683 !! 2024-05-15T15:29:07,683 check.warn(importable) 2024-05-15T15:29:07,683 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen_fastqc.assets.js' is absent from the `packages` configuration. 2024-05-15T15:29:07,684 !! 2024-05-15T15:29:07,685 ******************************************************************************** 2024-05-15T15:29:07,685 ############################ 2024-05-15T15:29:07,685 # Package would be ignored # 2024-05-15T15:29:07,686 ############################ 2024-05-15T15:29:07,686 Python recognizes 'multiqc.modules.dragen_fastqc.assets.js' as an importable package[^1], 2024-05-15T15:29:07,686 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,687 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,688 package, please make sure that 'multiqc.modules.dragen_fastqc.assets.js' is explicitly added 2024-05-15T15:29:07,689 to the `packages` configuration field. 2024-05-15T15:29:07,690 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,690 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,691 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,692 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,693 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,694 If you don't want 'multiqc.modules.dragen_fastqc.assets.js' to be distributed and are 2024-05-15T15:29:07,695 already explicitly excluding 'multiqc.modules.dragen_fastqc.assets.js' via 2024-05-15T15:29:07,695 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,696 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,697 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,698 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,699 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,700 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,700 even if it does not contain any `.py` files. 2024-05-15T15:29:07,701 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,701 directory, all directories are treated like packages. 2024-05-15T15:29:07,702 ******************************************************************************** 2024-05-15T15:29:07,703 !! 2024-05-15T15:29:07,704 check.warn(importable) 2024-05-15T15:29:07,704 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.eigenstratdatabasetools' is absent from the `packages` configuration. 2024-05-15T15:29:07,705 !! 2024-05-15T15:29:07,705 ******************************************************************************** 2024-05-15T15:29:07,706 ############################ 2024-05-15T15:29:07,706 # Package would be ignored # 2024-05-15T15:29:07,706 ############################ 2024-05-15T15:29:07,707 Python recognizes 'multiqc.modules.eigenstratdatabasetools' as an importable package[^1], 2024-05-15T15:29:07,707 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,708 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,708 package, please make sure that 'multiqc.modules.eigenstratdatabasetools' is explicitly added 2024-05-15T15:29:07,709 to the `packages` configuration field. 2024-05-15T15:29:07,709 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,710 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,710 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,711 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,711 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,712 If you don't want 'multiqc.modules.eigenstratdatabasetools' to be distributed and are 2024-05-15T15:29:07,713 already explicitly excluding 'multiqc.modules.eigenstratdatabasetools' via 2024-05-15T15:29:07,713 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,713 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,714 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,715 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,716 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,717 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,718 even if it does not contain any `.py` files. 2024-05-15T15:29:07,718 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,719 directory, all directories are treated like packages. 2024-05-15T15:29:07,719 ******************************************************************************** 2024-05-15T15:29:07,720 !! 2024-05-15T15:29:07,721 check.warn(importable) 2024-05-15T15:29:07,721 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastp' is absent from the `packages` configuration. 2024-05-15T15:29:07,722 !! 2024-05-15T15:29:07,723 ******************************************************************************** 2024-05-15T15:29:07,723 ############################ 2024-05-15T15:29:07,724 # Package would be ignored # 2024-05-15T15:29:07,724 ############################ 2024-05-15T15:29:07,725 Python recognizes 'multiqc.modules.fastp' as an importable package[^1], 2024-05-15T15:29:07,725 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,726 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,727 package, please make sure that 'multiqc.modules.fastp' is explicitly added 2024-05-15T15:29:07,727 to the `packages` configuration field. 2024-05-15T15:29:07,728 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,729 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,729 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,730 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,731 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,732 If you don't want 'multiqc.modules.fastp' to be distributed and are 2024-05-15T15:29:07,732 already explicitly excluding 'multiqc.modules.fastp' via 2024-05-15T15:29:07,732 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,733 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,733 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,734 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,735 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,736 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,737 even if it does not contain any `.py` files. 2024-05-15T15:29:07,737 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,737 directory, all directories are treated like packages. 2024-05-15T15:29:07,738 ******************************************************************************** 2024-05-15T15:29:07,739 !! 2024-05-15T15:29:07,739 check.warn(importable) 2024-05-15T15:29:07,739 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastq_screen' is absent from the `packages` configuration. 2024-05-15T15:29:07,740 !! 2024-05-15T15:29:07,741 ******************************************************************************** 2024-05-15T15:29:07,741 ############################ 2024-05-15T15:29:07,742 # Package would be ignored # 2024-05-15T15:29:07,742 ############################ 2024-05-15T15:29:07,743 Python recognizes 'multiqc.modules.fastq_screen' as an importable package[^1], 2024-05-15T15:29:07,744 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,745 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,745 package, please make sure that 'multiqc.modules.fastq_screen' is explicitly added 2024-05-15T15:29:07,746 to the `packages` configuration field. 2024-05-15T15:29:07,747 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,747 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,748 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,749 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,750 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,751 If you don't want 'multiqc.modules.fastq_screen' to be distributed and are 2024-05-15T15:29:07,751 already explicitly excluding 'multiqc.modules.fastq_screen' via 2024-05-15T15:29:07,752 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,752 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,753 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,754 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,755 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,757 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,757 even if it does not contain any `.py` files. 2024-05-15T15:29:07,758 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,759 directory, all directories are treated like packages. 2024-05-15T15:29:07,759 ******************************************************************************** 2024-05-15T15:29:07,760 !! 2024-05-15T15:29:07,760 check.warn(importable) 2024-05-15T15:29:07,760 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc' is absent from the `packages` configuration. 2024-05-15T15:29:07,761 !! 2024-05-15T15:29:07,761 ******************************************************************************** 2024-05-15T15:29:07,762 ############################ 2024-05-15T15:29:07,762 # Package would be ignored # 2024-05-15T15:29:07,762 ############################ 2024-05-15T15:29:07,763 Python recognizes 'multiqc.modules.fastqc' as an importable package[^1], 2024-05-15T15:29:07,763 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,764 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,764 package, please make sure that 'multiqc.modules.fastqc' is explicitly added 2024-05-15T15:29:07,765 to the `packages` configuration field. 2024-05-15T15:29:07,765 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,766 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,766 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,767 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,768 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,769 If you don't want 'multiqc.modules.fastqc' to be distributed and are 2024-05-15T15:29:07,770 already explicitly excluding 'multiqc.modules.fastqc' via 2024-05-15T15:29:07,770 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,771 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,771 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,772 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,774 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,775 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,776 even if it does not contain any `.py` files. 2024-05-15T15:29:07,776 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,777 directory, all directories are treated like packages. 2024-05-15T15:29:07,777 ******************************************************************************** 2024-05-15T15:29:07,778 !! 2024-05-15T15:29:07,778 check.warn(importable) 2024-05-15T15:29:07,779 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.assets.css' is absent from the `packages` configuration. 2024-05-15T15:29:07,779 !! 2024-05-15T15:29:07,780 ******************************************************************************** 2024-05-15T15:29:07,781 ############################ 2024-05-15T15:29:07,782 # Package would be ignored # 2024-05-15T15:29:07,782 ############################ 2024-05-15T15:29:07,783 Python recognizes 'multiqc.modules.fastqc.assets.css' as an importable package[^1], 2024-05-15T15:29:07,783 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,784 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,785 package, please make sure that 'multiqc.modules.fastqc.assets.css' is explicitly added 2024-05-15T15:29:07,785 to the `packages` configuration field. 2024-05-15T15:29:07,786 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,786 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,786 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,787 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,788 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,789 If you don't want 'multiqc.modules.fastqc.assets.css' to be distributed and are 2024-05-15T15:29:07,789 already explicitly excluding 'multiqc.modules.fastqc.assets.css' via 2024-05-15T15:29:07,789 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,790 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,790 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,791 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,791 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,793 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,793 even if it does not contain any `.py` files. 2024-05-15T15:29:07,793 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,794 directory, all directories are treated like packages. 2024-05-15T15:29:07,795 ******************************************************************************** 2024-05-15T15:29:07,796 !! 2024-05-15T15:29:07,796 check.warn(importable) 2024-05-15T15:29:07,797 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.assets.js' is absent from the `packages` configuration. 2024-05-15T15:29:07,797 !! 2024-05-15T15:29:07,798 ******************************************************************************** 2024-05-15T15:29:07,799 ############################ 2024-05-15T15:29:07,799 # Package would be ignored # 2024-05-15T15:29:07,800 ############################ 2024-05-15T15:29:07,801 Python recognizes 'multiqc.modules.fastqc.assets.js' as an importable package[^1], 2024-05-15T15:29:07,801 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,802 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,803 package, please make sure that 'multiqc.modules.fastqc.assets.js' is explicitly added 2024-05-15T15:29:07,803 to the `packages` configuration field. 2024-05-15T15:29:07,804 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,804 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,805 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,806 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,807 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,808 If you don't want 'multiqc.modules.fastqc.assets.js' to be distributed and are 2024-05-15T15:29:07,813 already explicitly excluding 'multiqc.modules.fastqc.assets.js' via 2024-05-15T15:29:07,813 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,814 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,815 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,816 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,817 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,818 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,818 even if it does not contain any `.py` files. 2024-05-15T15:29:07,819 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,819 directory, all directories are treated like packages. 2024-05-15T15:29:07,819 ******************************************************************************** 2024-05-15T15:29:07,820 !! 2024-05-15T15:29:07,821 check.warn(importable) 2024-05-15T15:29:07,821 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.fastqc_theoretical_gc' is absent from the `packages` configuration. 2024-05-15T15:29:07,821 !! 2024-05-15T15:29:07,822 ******************************************************************************** 2024-05-15T15:29:07,822 ############################ 2024-05-15T15:29:07,823 # Package would be ignored # 2024-05-15T15:29:07,823 ############################ 2024-05-15T15:29:07,823 Python recognizes 'multiqc.modules.fastqc.fastqc_theoretical_gc' as an importable package[^1], 2024-05-15T15:29:07,824 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,825 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,825 package, please make sure that 'multiqc.modules.fastqc.fastqc_theoretical_gc' is explicitly added 2024-05-15T15:29:07,826 to the `packages` configuration field. 2024-05-15T15:29:07,827 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,827 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,828 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,829 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,830 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,831 If you don't want 'multiqc.modules.fastqc.fastqc_theoretical_gc' to be distributed and are 2024-05-15T15:29:07,832 already explicitly excluding 'multiqc.modules.fastqc.fastqc_theoretical_gc' via 2024-05-15T15:29:07,832 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,833 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,834 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,834 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,835 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,837 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,838 even if it does not contain any `.py` files. 2024-05-15T15:29:07,838 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,839 directory, all directories are treated like packages. 2024-05-15T15:29:07,840 ******************************************************************************** 2024-05-15T15:29:07,841 !! 2024-05-15T15:29:07,841 check.warn(importable) 2024-05-15T15:29:07,842 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.featureCounts' is absent from the `packages` configuration. 2024-05-15T15:29:07,842 !! 2024-05-15T15:29:07,843 ******************************************************************************** 2024-05-15T15:29:07,844 ############################ 2024-05-15T15:29:07,844 # Package would be ignored # 2024-05-15T15:29:07,845 ############################ 2024-05-15T15:29:07,845 Python recognizes 'multiqc.modules.featureCounts' as an importable package[^1], 2024-05-15T15:29:07,845 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,846 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,846 package, please make sure that 'multiqc.modules.featureCounts' is explicitly added 2024-05-15T15:29:07,847 to the `packages` configuration field. 2024-05-15T15:29:07,847 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,848 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,848 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,849 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,850 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,850 If you don't want 'multiqc.modules.featureCounts' to be distributed and are 2024-05-15T15:29:07,851 already explicitly excluding 'multiqc.modules.featureCounts' via 2024-05-15T15:29:07,851 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,851 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,852 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,853 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,854 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,856 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,856 even if it does not contain any `.py` files. 2024-05-15T15:29:07,857 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,857 directory, all directories are treated like packages. 2024-05-15T15:29:07,858 ******************************************************************************** 2024-05-15T15:29:07,859 !! 2024-05-15T15:29:07,859 check.warn(importable) 2024-05-15T15:29:07,860 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fgbio' is absent from the `packages` configuration. 2024-05-15T15:29:07,861 !! 2024-05-15T15:29:07,861 ******************************************************************************** 2024-05-15T15:29:07,862 ############################ 2024-05-15T15:29:07,862 # Package would be ignored # 2024-05-15T15:29:07,863 ############################ 2024-05-15T15:29:07,863 Python recognizes 'multiqc.modules.fgbio' as an importable package[^1], 2024-05-15T15:29:07,864 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,865 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,865 package, please make sure that 'multiqc.modules.fgbio' is explicitly added 2024-05-15T15:29:07,866 to the `packages` configuration field. 2024-05-15T15:29:07,867 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,867 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,868 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,870 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,870 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,871 If you don't want 'multiqc.modules.fgbio' to be distributed and are 2024-05-15T15:29:07,871 already explicitly excluding 'multiqc.modules.fgbio' via 2024-05-15T15:29:07,872 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,872 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,872 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,873 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,874 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,875 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,875 even if it does not contain any `.py` files. 2024-05-15T15:29:07,876 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,876 directory, all directories are treated like packages. 2024-05-15T15:29:07,876 ******************************************************************************** 2024-05-15T15:29:07,877 !! 2024-05-15T15:29:07,878 check.warn(importable) 2024-05-15T15:29:07,878 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.filtlong' is absent from the `packages` configuration. 2024-05-15T15:29:07,878 !! 2024-05-15T15:29:07,879 ******************************************************************************** 2024-05-15T15:29:07,880 ############################ 2024-05-15T15:29:07,880 # Package would be ignored # 2024-05-15T15:29:07,881 ############################ 2024-05-15T15:29:07,881 Python recognizes 'multiqc.modules.filtlong' as an importable package[^1], 2024-05-15T15:29:07,882 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,883 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,883 package, please make sure that 'multiqc.modules.filtlong' is explicitly added 2024-05-15T15:29:07,884 to the `packages` configuration field. 2024-05-15T15:29:07,885 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,886 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,886 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,887 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,889 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,890 If you don't want 'multiqc.modules.filtlong' to be distributed and are 2024-05-15T15:29:07,890 already explicitly excluding 'multiqc.modules.filtlong' via 2024-05-15T15:29:07,891 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,891 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,892 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,893 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,894 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,895 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,896 even if it does not contain any `.py` files. 2024-05-15T15:29:07,896 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,897 directory, all directories are treated like packages. 2024-05-15T15:29:07,898 ******************************************************************************** 2024-05-15T15:29:07,899 !! 2024-05-15T15:29:07,899 check.warn(importable) 2024-05-15T15:29:07,899 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.flash' is absent from the `packages` configuration. 2024-05-15T15:29:07,900 !! 2024-05-15T15:29:07,900 ******************************************************************************** 2024-05-15T15:29:07,901 ############################ 2024-05-15T15:29:07,901 # Package would be ignored # 2024-05-15T15:29:07,901 ############################ 2024-05-15T15:29:07,902 Python recognizes 'multiqc.modules.flash' as an importable package[^1], 2024-05-15T15:29:07,902 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,903 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,903 package, please make sure that 'multiqc.modules.flash' is explicitly added 2024-05-15T15:29:07,903 to the `packages` configuration field. 2024-05-15T15:29:07,904 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,905 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,905 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,906 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,906 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,907 If you don't want 'multiqc.modules.flash' to be distributed and are 2024-05-15T15:29:07,908 already explicitly excluding 'multiqc.modules.flash' via 2024-05-15T15:29:07,908 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,909 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,909 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,910 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,911 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,913 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,914 even if it does not contain any `.py` files. 2024-05-15T15:29:07,914 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,915 directory, all directories are treated like packages. 2024-05-15T15:29:07,915 ******************************************************************************** 2024-05-15T15:29:07,916 !! 2024-05-15T15:29:07,917 check.warn(importable) 2024-05-15T15:29:07,917 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.flexbar' is absent from the `packages` configuration. 2024-05-15T15:29:07,917 !! 2024-05-15T15:29:07,918 ******************************************************************************** 2024-05-15T15:29:07,919 ############################ 2024-05-15T15:29:07,919 # Package would be ignored # 2024-05-15T15:29:07,920 ############################ 2024-05-15T15:29:07,920 Python recognizes 'multiqc.modules.flexbar' as an importable package[^1], 2024-05-15T15:29:07,921 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,922 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,922 package, please make sure that 'multiqc.modules.flexbar' is explicitly added 2024-05-15T15:29:07,923 to the `packages` configuration field. 2024-05-15T15:29:07,924 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,925 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,925 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,926 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,926 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,927 If you don't want 'multiqc.modules.flexbar' to be distributed and are 2024-05-15T15:29:07,927 already explicitly excluding 'multiqc.modules.flexbar' via 2024-05-15T15:29:07,928 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,928 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,928 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,929 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,930 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,931 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,931 even if it does not contain any `.py` files. 2024-05-15T15:29:07,932 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,932 directory, all directories are treated like packages. 2024-05-15T15:29:07,932 ******************************************************************************** 2024-05-15T15:29:07,933 !! 2024-05-15T15:29:07,934 check.warn(importable) 2024-05-15T15:29:07,934 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.freyja' is absent from the `packages` configuration. 2024-05-15T15:29:07,935 !! 2024-05-15T15:29:07,936 ******************************************************************************** 2024-05-15T15:29:07,936 ############################ 2024-05-15T15:29:07,937 # Package would be ignored # 2024-05-15T15:29:07,938 ############################ 2024-05-15T15:29:07,938 Python recognizes 'multiqc.modules.freyja' as an importable package[^1], 2024-05-15T15:29:07,939 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,940 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,940 package, please make sure that 'multiqc.modules.freyja' is explicitly added 2024-05-15T15:29:07,941 to the `packages` configuration field. 2024-05-15T15:29:07,942 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,942 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,942 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,943 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,944 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,945 If you don't want 'multiqc.modules.freyja' to be distributed and are 2024-05-15T15:29:07,946 already explicitly excluding 'multiqc.modules.freyja' via 2024-05-15T15:29:07,946 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,947 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,948 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,949 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,949 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,950 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,951 even if it does not contain any `.py` files. 2024-05-15T15:29:07,951 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,951 directory, all directories are treated like packages. 2024-05-15T15:29:07,952 ******************************************************************************** 2024-05-15T15:29:07,952 !! 2024-05-15T15:29:07,953 check.warn(importable) 2024-05-15T15:29:07,953 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gatk' is absent from the `packages` configuration. 2024-05-15T15:29:07,954 !! 2024-05-15T15:29:07,954 ******************************************************************************** 2024-05-15T15:29:07,955 ############################ 2024-05-15T15:29:07,955 # Package would be ignored # 2024-05-15T15:29:07,955 ############################ 2024-05-15T15:29:07,956 Python recognizes 'multiqc.modules.gatk' as an importable package[^1], 2024-05-15T15:29:07,956 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,957 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,957 package, please make sure that 'multiqc.modules.gatk' is explicitly added 2024-05-15T15:29:07,958 to the `packages` configuration field. 2024-05-15T15:29:07,959 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,959 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,960 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,961 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,962 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,963 If you don't want 'multiqc.modules.gatk' to be distributed and are 2024-05-15T15:29:07,964 already explicitly excluding 'multiqc.modules.gatk' via 2024-05-15T15:29:07,965 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,965 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,966 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,967 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,968 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,969 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,970 even if it does not contain any `.py` files. 2024-05-15T15:29:07,970 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,970 directory, all directories are treated like packages. 2024-05-15T15:29:07,971 ******************************************************************************** 2024-05-15T15:29:07,972 !! 2024-05-15T15:29:07,972 check.warn(importable) 2024-05-15T15:29:07,973 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gffcompare' is absent from the `packages` configuration. 2024-05-15T15:29:07,974 !! 2024-05-15T15:29:07,975 ******************************************************************************** 2024-05-15T15:29:07,975 ############################ 2024-05-15T15:29:07,976 # Package would be ignored # 2024-05-15T15:29:07,977 ############################ 2024-05-15T15:29:07,977 Python recognizes 'multiqc.modules.gffcompare' as an importable package[^1], 2024-05-15T15:29:07,977 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,978 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,979 package, please make sure that 'multiqc.modules.gffcompare' is explicitly added 2024-05-15T15:29:07,979 to the `packages` configuration field. 2024-05-15T15:29:07,980 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,980 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,981 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:07,981 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:07,982 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:07,983 If you don't want 'multiqc.modules.gffcompare' to be distributed and are 2024-05-15T15:29:07,983 already explicitly excluding 'multiqc.modules.gffcompare' via 2024-05-15T15:29:07,983 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:07,984 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:07,984 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:07,985 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:07,986 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:07,987 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:07,988 even if it does not contain any `.py` files. 2024-05-15T15:29:07,988 On the other hand, currently there is no concept of package data 2024-05-15T15:29:07,989 directory, all directories are treated like packages. 2024-05-15T15:29:07,989 ******************************************************************************** 2024-05-15T15:29:07,990 !! 2024-05-15T15:29:07,991 check.warn(importable) 2024-05-15T15:29:07,991 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.goleft_indexcov' is absent from the `packages` configuration. 2024-05-15T15:29:07,992 !! 2024-05-15T15:29:07,993 ******************************************************************************** 2024-05-15T15:29:07,994 ############################ 2024-05-15T15:29:07,994 # Package would be ignored # 2024-05-15T15:29:07,995 ############################ 2024-05-15T15:29:07,995 Python recognizes 'multiqc.modules.goleft_indexcov' as an importable package[^1], 2024-05-15T15:29:07,995 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:07,996 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:07,997 package, please make sure that 'multiqc.modules.goleft_indexcov' is explicitly added 2024-05-15T15:29:07,997 to the `packages` configuration field. 2024-05-15T15:29:07,998 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:07,999 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:07,999 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,000 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,001 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,002 If you don't want 'multiqc.modules.goleft_indexcov' to be distributed and are 2024-05-15T15:29:08,003 already explicitly excluding 'multiqc.modules.goleft_indexcov' via 2024-05-15T15:29:08,004 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,004 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,005 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,005 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,006 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,007 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,007 even if it does not contain any `.py` files. 2024-05-15T15:29:08,008 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,008 directory, all directories are treated like packages. 2024-05-15T15:29:08,009 ******************************************************************************** 2024-05-15T15:29:08,009 !! 2024-05-15T15:29:08,010 check.warn(importable) 2024-05-15T15:29:08,010 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gopeaks' is absent from the `packages` configuration. 2024-05-15T15:29:08,010 !! 2024-05-15T15:29:08,011 ******************************************************************************** 2024-05-15T15:29:08,012 ############################ 2024-05-15T15:29:08,012 # Package would be ignored # 2024-05-15T15:29:08,013 ############################ 2024-05-15T15:29:08,013 Python recognizes 'multiqc.modules.gopeaks' as an importable package[^1], 2024-05-15T15:29:08,013 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,015 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,015 package, please make sure that 'multiqc.modules.gopeaks' is explicitly added 2024-05-15T15:29:08,016 to the `packages` configuration field. 2024-05-15T15:29:08,017 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,017 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,018 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,019 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,020 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,021 If you don't want 'multiqc.modules.gopeaks' to be distributed and are 2024-05-15T15:29:08,022 already explicitly excluding 'multiqc.modules.gopeaks' via 2024-05-15T15:29:08,022 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,023 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,023 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,024 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,025 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,027 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,027 even if it does not contain any `.py` files. 2024-05-15T15:29:08,028 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,028 directory, all directories are treated like packages. 2024-05-15T15:29:08,029 ******************************************************************************** 2024-05-15T15:29:08,030 !! 2024-05-15T15:29:08,030 check.warn(importable) 2024-05-15T15:29:08,031 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.happy' is absent from the `packages` configuration. 2024-05-15T15:29:08,031 !! 2024-05-15T15:29:08,032 ******************************************************************************** 2024-05-15T15:29:08,032 ############################ 2024-05-15T15:29:08,032 # Package would be ignored # 2024-05-15T15:29:08,033 ############################ 2024-05-15T15:29:08,033 Python recognizes 'multiqc.modules.happy' as an importable package[^1], 2024-05-15T15:29:08,034 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,034 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,035 package, please make sure that 'multiqc.modules.happy' is explicitly added 2024-05-15T15:29:08,035 to the `packages` configuration field. 2024-05-15T15:29:08,036 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,036 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,037 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,038 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,038 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,039 If you don't want 'multiqc.modules.happy' to be distributed and are 2024-05-15T15:29:08,039 already explicitly excluding 'multiqc.modules.happy' via 2024-05-15T15:29:08,040 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,040 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,041 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,042 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,043 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,044 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,045 even if it does not contain any `.py` files. 2024-05-15T15:29:08,046 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,046 directory, all directories are treated like packages. 2024-05-15T15:29:08,047 ******************************************************************************** 2024-05-15T15:29:08,048 !! 2024-05-15T15:29:08,048 check.warn(importable) 2024-05-15T15:29:08,048 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicexplorer' is absent from the `packages` configuration. 2024-05-15T15:29:08,049 !! 2024-05-15T15:29:08,050 ******************************************************************************** 2024-05-15T15:29:08,050 ############################ 2024-05-15T15:29:08,051 # Package would be ignored # 2024-05-15T15:29:08,051 ############################ 2024-05-15T15:29:08,052 Python recognizes 'multiqc.modules.hicexplorer' as an importable package[^1], 2024-05-15T15:29:08,052 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,053 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,054 package, please make sure that 'multiqc.modules.hicexplorer' is explicitly added 2024-05-15T15:29:08,054 to the `packages` configuration field. 2024-05-15T15:29:08,055 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,056 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,057 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,058 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,058 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,059 If you don't want 'multiqc.modules.hicexplorer' to be distributed and are 2024-05-15T15:29:08,059 already explicitly excluding 'multiqc.modules.hicexplorer' via 2024-05-15T15:29:08,060 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,060 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,060 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,061 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,062 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,063 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,063 even if it does not contain any `.py` files. 2024-05-15T15:29:08,063 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,064 directory, all directories are treated like packages. 2024-05-15T15:29:08,064 ******************************************************************************** 2024-05-15T15:29:08,065 !! 2024-05-15T15:29:08,065 check.warn(importable) 2024-05-15T15:29:08,066 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicpro' is absent from the `packages` configuration. 2024-05-15T15:29:08,066 !! 2024-05-15T15:29:08,067 ******************************************************************************** 2024-05-15T15:29:08,067 ############################ 2024-05-15T15:29:08,068 # Package would be ignored # 2024-05-15T15:29:08,069 ############################ 2024-05-15T15:29:08,069 Python recognizes 'multiqc.modules.hicpro' as an importable package[^1], 2024-05-15T15:29:08,070 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,071 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,071 package, please make sure that 'multiqc.modules.hicpro' is explicitly added 2024-05-15T15:29:08,072 to the `packages` configuration field. 2024-05-15T15:29:08,073 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,073 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,074 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,075 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,075 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,076 If you don't want 'multiqc.modules.hicpro' to be distributed and are 2024-05-15T15:29:08,077 already explicitly excluding 'multiqc.modules.hicpro' via 2024-05-15T15:29:08,077 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,078 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,078 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,079 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,080 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,082 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,082 even if it does not contain any `.py` files. 2024-05-15T15:29:08,083 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,084 directory, all directories are treated like packages. 2024-05-15T15:29:08,084 ******************************************************************************** 2024-05-15T15:29:08,085 !! 2024-05-15T15:29:08,085 check.warn(importable) 2024-05-15T15:29:08,086 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicup' is absent from the `packages` configuration. 2024-05-15T15:29:08,086 !! 2024-05-15T15:29:08,087 ******************************************************************************** 2024-05-15T15:29:08,088 ############################ 2024-05-15T15:29:08,088 # Package would be ignored # 2024-05-15T15:29:08,089 ############################ 2024-05-15T15:29:08,089 Python recognizes 'multiqc.modules.hicup' as an importable package[^1], 2024-05-15T15:29:08,089 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,090 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,091 package, please make sure that 'multiqc.modules.hicup' is explicitly added 2024-05-15T15:29:08,091 to the `packages` configuration field. 2024-05-15T15:29:08,093 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,093 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,094 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,095 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,096 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,098 If you don't want 'multiqc.modules.hicup' to be distributed and are 2024-05-15T15:29:08,098 already explicitly excluding 'multiqc.modules.hicup' via 2024-05-15T15:29:08,099 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,100 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,101 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,102 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,103 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,105 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,106 even if it does not contain any `.py` files. 2024-05-15T15:29:08,106 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,107 directory, all directories are treated like packages. 2024-05-15T15:29:08,108 ******************************************************************************** 2024-05-15T15:29:08,109 !! 2024-05-15T15:29:08,109 check.warn(importable) 2024-05-15T15:29:08,110 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hifiasm' is absent from the `packages` configuration. 2024-05-15T15:29:08,110 !! 2024-05-15T15:29:08,112 ******************************************************************************** 2024-05-15T15:29:08,112 ############################ 2024-05-15T15:29:08,113 # Package would be ignored # 2024-05-15T15:29:08,114 ############################ 2024-05-15T15:29:08,115 Python recognizes 'multiqc.modules.hifiasm' as an importable package[^1], 2024-05-15T15:29:08,116 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,117 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,117 package, please make sure that 'multiqc.modules.hifiasm' is explicitly added 2024-05-15T15:29:08,118 to the `packages` configuration field. 2024-05-15T15:29:08,119 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,119 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,120 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,121 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,122 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,122 If you don't want 'multiqc.modules.hifiasm' to be distributed and are 2024-05-15T15:29:08,123 already explicitly excluding 'multiqc.modules.hifiasm' via 2024-05-15T15:29:08,123 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,124 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,124 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,125 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,126 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,128 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,128 even if it does not contain any `.py` files. 2024-05-15T15:29:08,129 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,129 directory, all directories are treated like packages. 2024-05-15T15:29:08,130 ******************************************************************************** 2024-05-15T15:29:08,131 !! 2024-05-15T15:29:08,132 check.warn(importable) 2024-05-15T15:29:08,133 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hisat2' is absent from the `packages` configuration. 2024-05-15T15:29:08,133 !! 2024-05-15T15:29:08,135 ******************************************************************************** 2024-05-15T15:29:08,135 ############################ 2024-05-15T15:29:08,136 # Package would be ignored # 2024-05-15T15:29:08,137 ############################ 2024-05-15T15:29:08,137 Python recognizes 'multiqc.modules.hisat2' as an importable package[^1], 2024-05-15T15:29:08,138 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,139 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,140 package, please make sure that 'multiqc.modules.hisat2' is explicitly added 2024-05-15T15:29:08,141 to the `packages` configuration field. 2024-05-15T15:29:08,142 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,142 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,143 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,144 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,145 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,147 If you don't want 'multiqc.modules.hisat2' to be distributed and are 2024-05-15T15:29:08,147 already explicitly excluding 'multiqc.modules.hisat2' via 2024-05-15T15:29:08,148 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,149 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,149 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,151 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,152 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,153 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,153 even if it does not contain any `.py` files. 2024-05-15T15:29:08,154 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,154 directory, all directories are treated like packages. 2024-05-15T15:29:08,155 ******************************************************************************** 2024-05-15T15:29:08,156 !! 2024-05-15T15:29:08,156 check.warn(importable) 2024-05-15T15:29:08,157 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.homer' is absent from the `packages` configuration. 2024-05-15T15:29:08,157 !! 2024-05-15T15:29:08,158 ******************************************************************************** 2024-05-15T15:29:08,159 ############################ 2024-05-15T15:29:08,159 # Package would be ignored # 2024-05-15T15:29:08,160 ############################ 2024-05-15T15:29:08,160 Python recognizes 'multiqc.modules.homer' as an importable package[^1], 2024-05-15T15:29:08,161 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,162 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,162 package, please make sure that 'multiqc.modules.homer' is explicitly added 2024-05-15T15:29:08,163 to the `packages` configuration field. 2024-05-15T15:29:08,164 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,165 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,165 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,166 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,168 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,169 If you don't want 'multiqc.modules.homer' to be distributed and are 2024-05-15T15:29:08,170 already explicitly excluding 'multiqc.modules.homer' via 2024-05-15T15:29:08,171 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,171 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,172 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,173 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,174 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,176 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,177 even if it does not contain any `.py` files. 2024-05-15T15:29:08,177 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,178 directory, all directories are treated like packages. 2024-05-15T15:29:08,178 ******************************************************************************** 2024-05-15T15:29:08,180 !! 2024-05-15T15:29:08,180 check.warn(importable) 2024-05-15T15:29:08,181 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hops' is absent from the `packages` configuration. 2024-05-15T15:29:08,182 !! 2024-05-15T15:29:08,183 ******************************************************************************** 2024-05-15T15:29:08,184 ############################ 2024-05-15T15:29:08,184 # Package would be ignored # 2024-05-15T15:29:08,185 ############################ 2024-05-15T15:29:08,185 Python recognizes 'multiqc.modules.hops' as an importable package[^1], 2024-05-15T15:29:08,185 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,186 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,187 package, please make sure that 'multiqc.modules.hops' is explicitly added 2024-05-15T15:29:08,187 to the `packages` configuration field. 2024-05-15T15:29:08,188 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,188 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,188 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,189 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,190 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,190 If you don't want 'multiqc.modules.hops' to be distributed and are 2024-05-15T15:29:08,191 already explicitly excluding 'multiqc.modules.hops' via 2024-05-15T15:29:08,191 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,192 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,192 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,193 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,194 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,195 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,196 even if it does not contain any `.py` files. 2024-05-15T15:29:08,196 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,197 directory, all directories are treated like packages. 2024-05-15T15:29:08,198 ******************************************************************************** 2024-05-15T15:29:08,199 !! 2024-05-15T15:29:08,199 check.warn(importable) 2024-05-15T15:29:08,200 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hostile' is absent from the `packages` configuration. 2024-05-15T15:29:08,200 !! 2024-05-15T15:29:08,202 ******************************************************************************** 2024-05-15T15:29:08,202 ############################ 2024-05-15T15:29:08,203 # Package would be ignored # 2024-05-15T15:29:08,203 ############################ 2024-05-15T15:29:08,203 Python recognizes 'multiqc.modules.hostile' as an importable package[^1], 2024-05-15T15:29:08,204 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,205 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,205 package, please make sure that 'multiqc.modules.hostile' is explicitly added 2024-05-15T15:29:08,206 to the `packages` configuration field. 2024-05-15T15:29:08,207 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,207 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,208 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,209 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,210 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,211 If you don't want 'multiqc.modules.hostile' to be distributed and are 2024-05-15T15:29:08,211 already explicitly excluding 'multiqc.modules.hostile' via 2024-05-15T15:29:08,211 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,212 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,212 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,213 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,213 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,214 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,215 even if it does not contain any `.py` files. 2024-05-15T15:29:08,215 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,215 directory, all directories are treated like packages. 2024-05-15T15:29:08,216 ******************************************************************************** 2024-05-15T15:29:08,217 !! 2024-05-15T15:29:08,217 check.warn(importable) 2024-05-15T15:29:08,217 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.htseq' is absent from the `packages` configuration. 2024-05-15T15:29:08,218 !! 2024-05-15T15:29:08,218 ******************************************************************************** 2024-05-15T15:29:08,219 ############################ 2024-05-15T15:29:08,219 # Package would be ignored # 2024-05-15T15:29:08,220 ############################ 2024-05-15T15:29:08,220 Python recognizes 'multiqc.modules.htseq' as an importable package[^1], 2024-05-15T15:29:08,220 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,221 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,222 package, please make sure that 'multiqc.modules.htseq' is explicitly added 2024-05-15T15:29:08,223 to the `packages` configuration field. 2024-05-15T15:29:08,224 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,224 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,225 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,226 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,227 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,228 If you don't want 'multiqc.modules.htseq' to be distributed and are 2024-05-15T15:29:08,229 already explicitly excluding 'multiqc.modules.htseq' via 2024-05-15T15:29:08,229 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,229 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,230 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,231 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,232 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,233 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,234 even if it does not contain any `.py` files. 2024-05-15T15:29:08,234 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,235 directory, all directories are treated like packages. 2024-05-15T15:29:08,235 ******************************************************************************** 2024-05-15T15:29:08,236 !! 2024-05-15T15:29:08,237 check.warn(importable) 2024-05-15T15:29:08,237 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.humid' is absent from the `packages` configuration. 2024-05-15T15:29:08,237 !! 2024-05-15T15:29:08,238 ******************************************************************************** 2024-05-15T15:29:08,238 ############################ 2024-05-15T15:29:08,238 # Package would be ignored # 2024-05-15T15:29:08,239 ############################ 2024-05-15T15:29:08,239 Python recognizes 'multiqc.modules.humid' as an importable package[^1], 2024-05-15T15:29:08,239 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,240 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,240 package, please make sure that 'multiqc.modules.humid' is explicitly added 2024-05-15T15:29:08,241 to the `packages` configuration field. 2024-05-15T15:29:08,241 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,242 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,242 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,243 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,243 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,245 If you don't want 'multiqc.modules.humid' to be distributed and are 2024-05-15T15:29:08,245 already explicitly excluding 'multiqc.modules.humid' via 2024-05-15T15:29:08,246 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,246 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,247 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,247 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,248 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,250 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,251 even if it does not contain any `.py` files. 2024-05-15T15:29:08,251 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,252 directory, all directories are treated like packages. 2024-05-15T15:29:08,252 ******************************************************************************** 2024-05-15T15:29:08,253 !! 2024-05-15T15:29:08,253 check.warn(importable) 2024-05-15T15:29:08,254 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.interop' is absent from the `packages` configuration. 2024-05-15T15:29:08,254 !! 2024-05-15T15:29:08,255 ******************************************************************************** 2024-05-15T15:29:08,256 ############################ 2024-05-15T15:29:08,256 # Package would be ignored # 2024-05-15T15:29:08,257 ############################ 2024-05-15T15:29:08,257 Python recognizes 'multiqc.modules.interop' as an importable package[^1], 2024-05-15T15:29:08,258 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,259 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,259 package, please make sure that 'multiqc.modules.interop' is explicitly added 2024-05-15T15:29:08,260 to the `packages` configuration field. 2024-05-15T15:29:08,261 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,261 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,262 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,262 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,263 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,264 If you don't want 'multiqc.modules.interop' to be distributed and are 2024-05-15T15:29:08,264 already explicitly excluding 'multiqc.modules.interop' via 2024-05-15T15:29:08,265 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,265 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,265 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,266 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,267 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,268 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,268 even if it does not contain any `.py` files. 2024-05-15T15:29:08,269 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,269 directory, all directories are treated like packages. 2024-05-15T15:29:08,269 ******************************************************************************** 2024-05-15T15:29:08,270 !! 2024-05-15T15:29:08,271 check.warn(importable) 2024-05-15T15:29:08,271 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.isoseq' is absent from the `packages` configuration. 2024-05-15T15:29:08,272 !! 2024-05-15T15:29:08,273 ******************************************************************************** 2024-05-15T15:29:08,274 ############################ 2024-05-15T15:29:08,274 # Package would be ignored # 2024-05-15T15:29:08,275 ############################ 2024-05-15T15:29:08,275 Python recognizes 'multiqc.modules.isoseq' as an importable package[^1], 2024-05-15T15:29:08,276 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,277 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,278 package, please make sure that 'multiqc.modules.isoseq' is explicitly added 2024-05-15T15:29:08,278 to the `packages` configuration field. 2024-05-15T15:29:08,279 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,280 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,280 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,281 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,282 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,283 If you don't want 'multiqc.modules.isoseq' to be distributed and are 2024-05-15T15:29:08,283 already explicitly excluding 'multiqc.modules.isoseq' via 2024-05-15T15:29:08,284 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,285 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,285 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,286 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,287 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,288 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,289 even if it does not contain any `.py` files. 2024-05-15T15:29:08,289 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,289 directory, all directories are treated like packages. 2024-05-15T15:29:08,290 ******************************************************************************** 2024-05-15T15:29:08,290 !! 2024-05-15T15:29:08,291 check.warn(importable) 2024-05-15T15:29:08,291 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ivar' is absent from the `packages` configuration. 2024-05-15T15:29:08,291 !! 2024-05-15T15:29:08,292 ******************************************************************************** 2024-05-15T15:29:08,292 ############################ 2024-05-15T15:29:08,293 # Package would be ignored # 2024-05-15T15:29:08,293 ############################ 2024-05-15T15:29:08,293 Python recognizes 'multiqc.modules.ivar' as an importable package[^1], 2024-05-15T15:29:08,294 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,294 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,295 package, please make sure that 'multiqc.modules.ivar' is explicitly added 2024-05-15T15:29:08,295 to the `packages` configuration field. 2024-05-15T15:29:08,296 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,296 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,297 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,297 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,299 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,300 If you don't want 'multiqc.modules.ivar' to be distributed and are 2024-05-15T15:29:08,300 already explicitly excluding 'multiqc.modules.ivar' via 2024-05-15T15:29:08,301 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,301 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,302 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,303 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,303 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,305 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,305 even if it does not contain any `.py` files. 2024-05-15T15:29:08,306 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,306 directory, all directories are treated like packages. 2024-05-15T15:29:08,307 ******************************************************************************** 2024-05-15T15:29:08,308 !! 2024-05-15T15:29:08,308 check.warn(importable) 2024-05-15T15:29:08,309 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.jcvi' is absent from the `packages` configuration. 2024-05-15T15:29:08,309 !! 2024-05-15T15:29:08,310 ******************************************************************************** 2024-05-15T15:29:08,311 ############################ 2024-05-15T15:29:08,311 # Package would be ignored # 2024-05-15T15:29:08,312 ############################ 2024-05-15T15:29:08,312 Python recognizes 'multiqc.modules.jcvi' as an importable package[^1], 2024-05-15T15:29:08,313 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,314 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,314 package, please make sure that 'multiqc.modules.jcvi' is explicitly added 2024-05-15T15:29:08,315 to the `packages` configuration field. 2024-05-15T15:29:08,315 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,316 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,316 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,317 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,318 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,318 If you don't want 'multiqc.modules.jcvi' to be distributed and are 2024-05-15T15:29:08,319 already explicitly excluding 'multiqc.modules.jcvi' via 2024-05-15T15:29:08,319 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,319 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,320 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,320 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,321 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,322 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,323 even if it does not contain any `.py` files. 2024-05-15T15:29:08,323 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,324 directory, all directories are treated like packages. 2024-05-15T15:29:08,324 ******************************************************************************** 2024-05-15T15:29:08,325 !! 2024-05-15T15:29:08,325 check.warn(importable) 2024-05-15T15:29:08,326 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.jellyfish' is absent from the `packages` configuration. 2024-05-15T15:29:08,327 !! 2024-05-15T15:29:08,328 ******************************************************************************** 2024-05-15T15:29:08,328 ############################ 2024-05-15T15:29:08,329 # Package would be ignored # 2024-05-15T15:29:08,329 ############################ 2024-05-15T15:29:08,330 Python recognizes 'multiqc.modules.jellyfish' as an importable package[^1], 2024-05-15T15:29:08,330 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,331 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,332 package, please make sure that 'multiqc.modules.jellyfish' is explicitly added 2024-05-15T15:29:08,332 to the `packages` configuration field. 2024-05-15T15:29:08,333 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,334 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,334 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,335 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,336 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,337 If you don't want 'multiqc.modules.jellyfish' to be distributed and are 2024-05-15T15:29:08,338 already explicitly excluding 'multiqc.modules.jellyfish' via 2024-05-15T15:29:08,338 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,339 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,340 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,340 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,341 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,342 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,343 even if it does not contain any `.py` files. 2024-05-15T15:29:08,343 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,344 directory, all directories are treated like packages. 2024-05-15T15:29:08,344 ******************************************************************************** 2024-05-15T15:29:08,345 !! 2024-05-15T15:29:08,345 check.warn(importable) 2024-05-15T15:29:08,346 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kaiju' is absent from the `packages` configuration. 2024-05-15T15:29:08,346 !! 2024-05-15T15:29:08,347 ******************************************************************************** 2024-05-15T15:29:08,347 ############################ 2024-05-15T15:29:08,348 # Package would be ignored # 2024-05-15T15:29:08,348 ############################ 2024-05-15T15:29:08,348 Python recognizes 'multiqc.modules.kaiju' as an importable package[^1], 2024-05-15T15:29:08,349 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,349 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,350 package, please make sure that 'multiqc.modules.kaiju' is explicitly added 2024-05-15T15:29:08,350 to the `packages` configuration field. 2024-05-15T15:29:08,351 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,351 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,352 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,353 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,354 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,354 If you don't want 'multiqc.modules.kaiju' to be distributed and are 2024-05-15T15:29:08,355 already explicitly excluding 'multiqc.modules.kaiju' via 2024-05-15T15:29:08,355 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,356 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,356 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,357 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,358 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,359 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,359 even if it does not contain any `.py` files. 2024-05-15T15:29:08,360 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,360 directory, all directories are treated like packages. 2024-05-15T15:29:08,361 ******************************************************************************** 2024-05-15T15:29:08,362 !! 2024-05-15T15:29:08,362 check.warn(importable) 2024-05-15T15:29:08,363 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kallisto' is absent from the `packages` configuration. 2024-05-15T15:29:08,363 !! 2024-05-15T15:29:08,364 ******************************************************************************** 2024-05-15T15:29:08,365 ############################ 2024-05-15T15:29:08,365 # Package would be ignored # 2024-05-15T15:29:08,365 ############################ 2024-05-15T15:29:08,366 Python recognizes 'multiqc.modules.kallisto' as an importable package[^1], 2024-05-15T15:29:08,366 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,366 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,367 package, please make sure that 'multiqc.modules.kallisto' is explicitly added 2024-05-15T15:29:08,367 to the `packages` configuration field. 2024-05-15T15:29:08,368 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,368 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,368 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,369 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,370 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,371 If you don't want 'multiqc.modules.kallisto' to be distributed and are 2024-05-15T15:29:08,371 already explicitly excluding 'multiqc.modules.kallisto' via 2024-05-15T15:29:08,371 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,372 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,372 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,373 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,374 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,376 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,376 even if it does not contain any `.py` files. 2024-05-15T15:29:08,376 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,377 directory, all directories are treated like packages. 2024-05-15T15:29:08,377 ******************************************************************************** 2024-05-15T15:29:08,378 !! 2024-05-15T15:29:08,379 check.warn(importable) 2024-05-15T15:29:08,379 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kat' is absent from the `packages` configuration. 2024-05-15T15:29:08,379 !! 2024-05-15T15:29:08,380 ******************************************************************************** 2024-05-15T15:29:08,381 ############################ 2024-05-15T15:29:08,381 # Package would be ignored # 2024-05-15T15:29:08,382 ############################ 2024-05-15T15:29:08,382 Python recognizes 'multiqc.modules.kat' as an importable package[^1], 2024-05-15T15:29:08,382 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,383 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,384 package, please make sure that 'multiqc.modules.kat' is explicitly added 2024-05-15T15:29:08,384 to the `packages` configuration field. 2024-05-15T15:29:08,386 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,386 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,387 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,388 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,389 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,390 If you don't want 'multiqc.modules.kat' to be distributed and are 2024-05-15T15:29:08,390 already explicitly excluding 'multiqc.modules.kat' via 2024-05-15T15:29:08,390 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,391 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,391 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,392 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,393 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,394 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,394 even if it does not contain any `.py` files. 2024-05-15T15:29:08,394 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,395 directory, all directories are treated like packages. 2024-05-15T15:29:08,395 ******************************************************************************** 2024-05-15T15:29:08,396 !! 2024-05-15T15:29:08,396 check.warn(importable) 2024-05-15T15:29:08,397 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kraken' is absent from the `packages` configuration. 2024-05-15T15:29:08,397 !! 2024-05-15T15:29:08,398 ******************************************************************************** 2024-05-15T15:29:08,398 ############################ 2024-05-15T15:29:08,398 # Package would be ignored # 2024-05-15T15:29:08,399 ############################ 2024-05-15T15:29:08,399 Python recognizes 'multiqc.modules.kraken' as an importable package[^1], 2024-05-15T15:29:08,400 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,401 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,402 package, please make sure that 'multiqc.modules.kraken' is explicitly added 2024-05-15T15:29:08,402 to the `packages` configuration field. 2024-05-15T15:29:08,403 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,404 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,404 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,406 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,406 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,407 If you don't want 'multiqc.modules.kraken' to be distributed and are 2024-05-15T15:29:08,408 already explicitly excluding 'multiqc.modules.kraken' via 2024-05-15T15:29:08,408 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,409 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,409 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,410 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,411 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,413 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,413 even if it does not contain any `.py` files. 2024-05-15T15:29:08,414 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,415 directory, all directories are treated like packages. 2024-05-15T15:29:08,415 ******************************************************************************** 2024-05-15T15:29:08,417 !! 2024-05-15T15:29:08,417 check.warn(importable) 2024-05-15T15:29:08,417 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.leehom' is absent from the `packages` configuration. 2024-05-15T15:29:08,418 !! 2024-05-15T15:29:08,418 ******************************************************************************** 2024-05-15T15:29:08,419 ############################ 2024-05-15T15:29:08,419 # Package would be ignored # 2024-05-15T15:29:08,419 ############################ 2024-05-15T15:29:08,420 Python recognizes 'multiqc.modules.leehom' as an importable package[^1], 2024-05-15T15:29:08,421 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,421 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,422 package, please make sure that 'multiqc.modules.leehom' is explicitly added 2024-05-15T15:29:08,422 to the `packages` configuration field. 2024-05-15T15:29:08,423 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,423 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,424 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,424 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,425 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,426 If you don't want 'multiqc.modules.leehom' to be distributed and are 2024-05-15T15:29:08,427 already explicitly excluding 'multiqc.modules.leehom' via 2024-05-15T15:29:08,427 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,428 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,428 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,429 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,430 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,432 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,433 even if it does not contain any `.py` files. 2024-05-15T15:29:08,433 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,434 directory, all directories are treated like packages. 2024-05-15T15:29:08,434 ******************************************************************************** 2024-05-15T15:29:08,435 !! 2024-05-15T15:29:08,436 check.warn(importable) 2024-05-15T15:29:08,436 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.librarian' is absent from the `packages` configuration. 2024-05-15T15:29:08,436 !! 2024-05-15T15:29:08,437 ******************************************************************************** 2024-05-15T15:29:08,438 ############################ 2024-05-15T15:29:08,438 # Package would be ignored # 2024-05-15T15:29:08,439 ############################ 2024-05-15T15:29:08,440 Python recognizes 'multiqc.modules.librarian' as an importable package[^1], 2024-05-15T15:29:08,440 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,441 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,442 package, please make sure that 'multiqc.modules.librarian' is explicitly added 2024-05-15T15:29:08,442 to the `packages` configuration field. 2024-05-15T15:29:08,444 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,444 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,444 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,445 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,446 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,447 If you don't want 'multiqc.modules.librarian' to be distributed and are 2024-05-15T15:29:08,447 already explicitly excluding 'multiqc.modules.librarian' via 2024-05-15T15:29:08,447 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,448 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,448 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,449 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,449 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,450 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,451 even if it does not contain any `.py` files. 2024-05-15T15:29:08,451 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,452 directory, all directories are treated like packages. 2024-05-15T15:29:08,452 ******************************************************************************** 2024-05-15T15:29:08,453 !! 2024-05-15T15:29:08,453 check.warn(importable) 2024-05-15T15:29:08,454 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.lima' is absent from the `packages` configuration. 2024-05-15T15:29:08,455 !! 2024-05-15T15:29:08,456 ******************************************************************************** 2024-05-15T15:29:08,456 ############################ 2024-05-15T15:29:08,457 # Package would be ignored # 2024-05-15T15:29:08,457 ############################ 2024-05-15T15:29:08,458 Python recognizes 'multiqc.modules.lima' as an importable package[^1], 2024-05-15T15:29:08,458 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,459 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,460 package, please make sure that 'multiqc.modules.lima' is explicitly added 2024-05-15T15:29:08,461 to the `packages` configuration field. 2024-05-15T15:29:08,462 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,462 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,463 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,464 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,465 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,466 If you don't want 'multiqc.modules.lima' to be distributed and are 2024-05-15T15:29:08,466 already explicitly excluding 'multiqc.modules.lima' via 2024-05-15T15:29:08,467 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,467 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,468 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,469 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,470 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,471 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,471 even if it does not contain any `.py` files. 2024-05-15T15:29:08,472 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,472 directory, all directories are treated like packages. 2024-05-15T15:29:08,472 ******************************************************************************** 2024-05-15T15:29:08,473 !! 2024-05-15T15:29:08,474 check.warn(importable) 2024-05-15T15:29:08,474 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.longranger' is absent from the `packages` configuration. 2024-05-15T15:29:08,474 !! 2024-05-15T15:29:08,475 ******************************************************************************** 2024-05-15T15:29:08,475 ############################ 2024-05-15T15:29:08,476 # Package would be ignored # 2024-05-15T15:29:08,476 ############################ 2024-05-15T15:29:08,476 Python recognizes 'multiqc.modules.longranger' as an importable package[^1], 2024-05-15T15:29:08,477 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,478 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,478 package, please make sure that 'multiqc.modules.longranger' is explicitly added 2024-05-15T15:29:08,478 to the `packages` configuration field. 2024-05-15T15:29:08,479 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,480 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,480 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,481 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,482 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,483 If you don't want 'multiqc.modules.longranger' to be distributed and are 2024-05-15T15:29:08,484 already explicitly excluding 'multiqc.modules.longranger' via 2024-05-15T15:29:08,485 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,485 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,486 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,487 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,488 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,490 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,490 even if it does not contain any `.py` files. 2024-05-15T15:29:08,491 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,491 directory, all directories are treated like packages. 2024-05-15T15:29:08,491 ******************************************************************************** 2024-05-15T15:29:08,493 !! 2024-05-15T15:29:08,493 check.warn(importable) 2024-05-15T15:29:08,494 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.macs2' is absent from the `packages` configuration. 2024-05-15T15:29:08,494 !! 2024-05-15T15:29:08,495 ******************************************************************************** 2024-05-15T15:29:08,496 ############################ 2024-05-15T15:29:08,497 # Package would be ignored # 2024-05-15T15:29:08,497 ############################ 2024-05-15T15:29:08,498 Python recognizes 'multiqc.modules.macs2' as an importable package[^1], 2024-05-15T15:29:08,498 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,499 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,499 package, please make sure that 'multiqc.modules.macs2' is explicitly added 2024-05-15T15:29:08,500 to the `packages` configuration field. 2024-05-15T15:29:08,500 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,501 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,501 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,502 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,503 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,503 If you don't want 'multiqc.modules.macs2' to be distributed and are 2024-05-15T15:29:08,504 already explicitly excluding 'multiqc.modules.macs2' via 2024-05-15T15:29:08,504 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,505 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,505 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,506 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,506 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,508 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,509 even if it does not contain any `.py` files. 2024-05-15T15:29:08,509 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,510 directory, all directories are treated like packages. 2024-05-15T15:29:08,510 ******************************************************************************** 2024-05-15T15:29:08,511 !! 2024-05-15T15:29:08,512 check.warn(importable) 2024-05-15T15:29:08,513 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.malt' is absent from the `packages` configuration. 2024-05-15T15:29:08,513 !! 2024-05-15T15:29:08,515 ******************************************************************************** 2024-05-15T15:29:08,515 ############################ 2024-05-15T15:29:08,516 # Package would be ignored # 2024-05-15T15:29:08,517 ############################ 2024-05-15T15:29:08,517 Python recognizes 'multiqc.modules.malt' as an importable package[^1], 2024-05-15T15:29:08,518 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,519 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,519 package, please make sure that 'multiqc.modules.malt' is explicitly added 2024-05-15T15:29:08,520 to the `packages` configuration field. 2024-05-15T15:29:08,521 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,521 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,522 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,523 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,524 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,525 If you don't want 'multiqc.modules.malt' to be distributed and are 2024-05-15T15:29:08,526 already explicitly excluding 'multiqc.modules.malt' via 2024-05-15T15:29:08,527 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,527 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,528 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,528 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,529 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,530 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,531 even if it does not contain any `.py` files. 2024-05-15T15:29:08,531 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,531 directory, all directories are treated like packages. 2024-05-15T15:29:08,532 ******************************************************************************** 2024-05-15T15:29:08,532 !! 2024-05-15T15:29:08,533 check.warn(importable) 2024-05-15T15:29:08,533 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mapdamage' is absent from the `packages` configuration. 2024-05-15T15:29:08,534 !! 2024-05-15T15:29:08,534 ******************************************************************************** 2024-05-15T15:29:08,535 ############################ 2024-05-15T15:29:08,535 # Package would be ignored # 2024-05-15T15:29:08,535 ############################ 2024-05-15T15:29:08,536 Python recognizes 'multiqc.modules.mapdamage' as an importable package[^1], 2024-05-15T15:29:08,536 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,537 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,538 package, please make sure that 'multiqc.modules.mapdamage' is explicitly added 2024-05-15T15:29:08,538 to the `packages` configuration field. 2024-05-15T15:29:08,539 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,540 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,540 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,541 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,542 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,543 If you don't want 'multiqc.modules.mapdamage' to be distributed and are 2024-05-15T15:29:08,544 already explicitly excluding 'multiqc.modules.mapdamage' via 2024-05-15T15:29:08,544 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,545 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,545 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,546 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,547 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,548 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,549 even if it does not contain any `.py` files. 2024-05-15T15:29:08,549 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,550 directory, all directories are treated like packages. 2024-05-15T15:29:08,550 ******************************************************************************** 2024-05-15T15:29:08,552 !! 2024-05-15T15:29:08,552 check.warn(importable) 2024-05-15T15:29:08,553 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.megahit' is absent from the `packages` configuration. 2024-05-15T15:29:08,553 !! 2024-05-15T15:29:08,554 ******************************************************************************** 2024-05-15T15:29:08,555 ############################ 2024-05-15T15:29:08,555 # Package would be ignored # 2024-05-15T15:29:08,556 ############################ 2024-05-15T15:29:08,556 Python recognizes 'multiqc.modules.megahit' as an importable package[^1], 2024-05-15T15:29:08,556 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,557 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,558 package, please make sure that 'multiqc.modules.megahit' is explicitly added 2024-05-15T15:29:08,558 to the `packages` configuration field. 2024-05-15T15:29:08,559 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,559 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,560 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,560 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,561 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,562 If you don't want 'multiqc.modules.megahit' to be distributed and are 2024-05-15T15:29:08,563 already explicitly excluding 'multiqc.modules.megahit' via 2024-05-15T15:29:08,563 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,564 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,564 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,566 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,567 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,568 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,569 even if it does not contain any `.py` files. 2024-05-15T15:29:08,570 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,570 directory, all directories are treated like packages. 2024-05-15T15:29:08,571 ******************************************************************************** 2024-05-15T15:29:08,572 !! 2024-05-15T15:29:08,572 check.warn(importable) 2024-05-15T15:29:08,573 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.metaphlan' is absent from the `packages` configuration. 2024-05-15T15:29:08,573 !! 2024-05-15T15:29:08,574 ******************************************************************************** 2024-05-15T15:29:08,575 ############################ 2024-05-15T15:29:08,575 # Package would be ignored # 2024-05-15T15:29:08,576 ############################ 2024-05-15T15:29:08,576 Python recognizes 'multiqc.modules.metaphlan' as an importable package[^1], 2024-05-15T15:29:08,577 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,578 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,578 package, please make sure that 'multiqc.modules.metaphlan' is explicitly added 2024-05-15T15:29:08,579 to the `packages` configuration field. 2024-05-15T15:29:08,580 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,580 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,581 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,582 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,583 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,583 If you don't want 'multiqc.modules.metaphlan' to be distributed and are 2024-05-15T15:29:08,584 already explicitly excluding 'multiqc.modules.metaphlan' via 2024-05-15T15:29:08,584 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,584 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,585 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,586 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,586 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,587 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,588 even if it does not contain any `.py` files. 2024-05-15T15:29:08,588 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,588 directory, all directories are treated like packages. 2024-05-15T15:29:08,589 ******************************************************************************** 2024-05-15T15:29:08,589 !! 2024-05-15T15:29:08,590 check.warn(importable) 2024-05-15T15:29:08,590 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.methylqa' is absent from the `packages` configuration. 2024-05-15T15:29:08,590 !! 2024-05-15T15:29:08,591 ******************************************************************************** 2024-05-15T15:29:08,592 ############################ 2024-05-15T15:29:08,593 # Package would be ignored # 2024-05-15T15:29:08,593 ############################ 2024-05-15T15:29:08,594 Python recognizes 'multiqc.modules.methylqa' as an importable package[^1], 2024-05-15T15:29:08,594 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,595 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,596 package, please make sure that 'multiqc.modules.methylqa' is explicitly added 2024-05-15T15:29:08,596 to the `packages` configuration field. 2024-05-15T15:29:08,597 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,598 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,599 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,600 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,600 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,602 If you don't want 'multiqc.modules.methylqa' to be distributed and are 2024-05-15T15:29:08,602 already explicitly excluding 'multiqc.modules.methylqa' via 2024-05-15T15:29:08,603 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,603 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,604 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,605 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,606 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,608 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,608 even if it does not contain any `.py` files. 2024-05-15T15:29:08,609 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,610 directory, all directories are treated like packages. 2024-05-15T15:29:08,610 ******************************************************************************** 2024-05-15T15:29:08,611 !! 2024-05-15T15:29:08,611 check.warn(importable) 2024-05-15T15:29:08,612 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.minionqc' is absent from the `packages` configuration. 2024-05-15T15:29:08,612 !! 2024-05-15T15:29:08,613 ******************************************************************************** 2024-05-15T15:29:08,613 ############################ 2024-05-15T15:29:08,614 # Package would be ignored # 2024-05-15T15:29:08,614 ############################ 2024-05-15T15:29:08,614 Python recognizes 'multiqc.modules.minionqc' as an importable package[^1], 2024-05-15T15:29:08,615 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,615 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,616 package, please make sure that 'multiqc.modules.minionqc' is explicitly added 2024-05-15T15:29:08,616 to the `packages` configuration field. 2024-05-15T15:29:08,617 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,617 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,618 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,619 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,619 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,620 If you don't want 'multiqc.modules.minionqc' to be distributed and are 2024-05-15T15:29:08,621 already explicitly excluding 'multiqc.modules.minionqc' via 2024-05-15T15:29:08,622 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,622 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,622 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,623 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,625 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,626 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,627 even if it does not contain any `.py` files. 2024-05-15T15:29:08,627 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,628 directory, all directories are treated like packages. 2024-05-15T15:29:08,629 ******************************************************************************** 2024-05-15T15:29:08,629 !! 2024-05-15T15:29:08,630 check.warn(importable) 2024-05-15T15:29:08,630 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mirtop' is absent from the `packages` configuration. 2024-05-15T15:29:08,631 !! 2024-05-15T15:29:08,632 ******************************************************************************** 2024-05-15T15:29:08,632 ############################ 2024-05-15T15:29:08,633 # Package would be ignored # 2024-05-15T15:29:08,633 ############################ 2024-05-15T15:29:08,634 Python recognizes 'multiqc.modules.mirtop' as an importable package[^1], 2024-05-15T15:29:08,634 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,635 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,636 package, please make sure that 'multiqc.modules.mirtop' is explicitly added 2024-05-15T15:29:08,637 to the `packages` configuration field. 2024-05-15T15:29:08,638 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,638 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,638 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,639 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,640 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,641 If you don't want 'multiqc.modules.mirtop' to be distributed and are 2024-05-15T15:29:08,641 already explicitly excluding 'multiqc.modules.mirtop' via 2024-05-15T15:29:08,641 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,642 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,642 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,643 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,644 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,645 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,645 even if it does not contain any `.py` files. 2024-05-15T15:29:08,646 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,646 directory, all directories are treated like packages. 2024-05-15T15:29:08,646 ******************************************************************************** 2024-05-15T15:29:08,647 !! 2024-05-15T15:29:08,648 check.warn(importable) 2024-05-15T15:29:08,648 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mirtrace' is absent from the `packages` configuration. 2024-05-15T15:29:08,649 !! 2024-05-15T15:29:08,650 ******************************************************************************** 2024-05-15T15:29:08,651 ############################ 2024-05-15T15:29:08,651 # Package would be ignored # 2024-05-15T15:29:08,652 ############################ 2024-05-15T15:29:08,653 Python recognizes 'multiqc.modules.mirtrace' as an importable package[^1], 2024-05-15T15:29:08,653 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,654 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,654 package, please make sure that 'multiqc.modules.mirtrace' is explicitly added 2024-05-15T15:29:08,655 to the `packages` configuration field. 2024-05-15T15:29:08,656 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,656 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,657 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,658 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,658 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,659 If you don't want 'multiqc.modules.mirtrace' to be distributed and are 2024-05-15T15:29:08,660 already explicitly excluding 'multiqc.modules.mirtrace' via 2024-05-15T15:29:08,661 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,661 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,662 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,663 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,664 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,665 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,665 even if it does not contain any `.py` files. 2024-05-15T15:29:08,666 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,666 directory, all directories are treated like packages. 2024-05-15T15:29:08,666 ******************************************************************************** 2024-05-15T15:29:08,667 !! 2024-05-15T15:29:08,667 check.warn(importable) 2024-05-15T15:29:08,668 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mosdepth' is absent from the `packages` configuration. 2024-05-15T15:29:08,668 !! 2024-05-15T15:29:08,669 ******************************************************************************** 2024-05-15T15:29:08,670 ############################ 2024-05-15T15:29:08,670 # Package would be ignored # 2024-05-15T15:29:08,670 ############################ 2024-05-15T15:29:08,671 Python recognizes 'multiqc.modules.mosdepth' as an importable package[^1], 2024-05-15T15:29:08,671 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,672 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,672 package, please make sure that 'multiqc.modules.mosdepth' is explicitly added 2024-05-15T15:29:08,673 to the `packages` configuration field. 2024-05-15T15:29:08,674 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,674 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,675 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,676 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,677 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,678 If you don't want 'multiqc.modules.mosdepth' to be distributed and are 2024-05-15T15:29:08,678 already explicitly excluding 'multiqc.modules.mosdepth' via 2024-05-15T15:29:08,679 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,680 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,680 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,681 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,682 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,683 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,684 even if it does not contain any `.py` files. 2024-05-15T15:29:08,684 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,685 directory, all directories are treated like packages. 2024-05-15T15:29:08,685 ******************************************************************************** 2024-05-15T15:29:08,686 !! 2024-05-15T15:29:08,687 check.warn(importable) 2024-05-15T15:29:08,687 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.motus' is absent from the `packages` configuration. 2024-05-15T15:29:08,688 !! 2024-05-15T15:29:08,689 ******************************************************************************** 2024-05-15T15:29:08,689 ############################ 2024-05-15T15:29:08,690 # Package would be ignored # 2024-05-15T15:29:08,690 ############################ 2024-05-15T15:29:08,690 Python recognizes 'multiqc.modules.motus' as an importable package[^1], 2024-05-15T15:29:08,691 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,691 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,692 package, please make sure that 'multiqc.modules.motus' is explicitly added 2024-05-15T15:29:08,692 to the `packages` configuration field. 2024-05-15T15:29:08,693 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,693 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,693 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,694 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,695 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,696 If you don't want 'multiqc.modules.motus' to be distributed and are 2024-05-15T15:29:08,696 already explicitly excluding 'multiqc.modules.motus' via 2024-05-15T15:29:08,696 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,697 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,697 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,698 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,699 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,700 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,701 even if it does not contain any `.py` files. 2024-05-15T15:29:08,701 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,702 directory, all directories are treated like packages. 2024-05-15T15:29:08,702 ******************************************************************************** 2024-05-15T15:29:08,703 !! 2024-05-15T15:29:08,704 check.warn(importable) 2024-05-15T15:29:08,704 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mtnucratio' is absent from the `packages` configuration. 2024-05-15T15:29:08,705 !! 2024-05-15T15:29:08,706 ******************************************************************************** 2024-05-15T15:29:08,706 ############################ 2024-05-15T15:29:08,706 # Package would be ignored # 2024-05-15T15:29:08,707 ############################ 2024-05-15T15:29:08,707 Python recognizes 'multiqc.modules.mtnucratio' as an importable package[^1], 2024-05-15T15:29:08,708 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,709 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,709 package, please make sure that 'multiqc.modules.mtnucratio' is explicitly added 2024-05-15T15:29:08,710 to the `packages` configuration field. 2024-05-15T15:29:08,710 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,711 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,712 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,713 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,714 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,715 If you don't want 'multiqc.modules.mtnucratio' to be distributed and are 2024-05-15T15:29:08,716 already explicitly excluding 'multiqc.modules.mtnucratio' via 2024-05-15T15:29:08,716 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,716 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,717 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,717 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,718 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,719 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,719 even if it does not contain any `.py` files. 2024-05-15T15:29:08,720 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,720 directory, all directories are treated like packages. 2024-05-15T15:29:08,720 ******************************************************************************** 2024-05-15T15:29:08,721 !! 2024-05-15T15:29:08,721 check.warn(importable) 2024-05-15T15:29:08,722 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.multivcfanalyzer' is absent from the `packages` configuration. 2024-05-15T15:29:08,722 !! 2024-05-15T15:29:08,723 ******************************************************************************** 2024-05-15T15:29:08,723 ############################ 2024-05-15T15:29:08,723 # Package would be ignored # 2024-05-15T15:29:08,724 ############################ 2024-05-15T15:29:08,725 Python recognizes 'multiqc.modules.multivcfanalyzer' as an importable package[^1], 2024-05-15T15:29:08,725 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,726 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,727 package, please make sure that 'multiqc.modules.multivcfanalyzer' is explicitly added 2024-05-15T15:29:08,727 to the `packages` configuration field. 2024-05-15T15:29:08,728 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,729 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,729 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,730 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,731 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,732 If you don't want 'multiqc.modules.multivcfanalyzer' to be distributed and are 2024-05-15T15:29:08,733 already explicitly excluding 'multiqc.modules.multivcfanalyzer' via 2024-05-15T15:29:08,733 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,734 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,734 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,735 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,736 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,738 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,738 even if it does not contain any `.py` files. 2024-05-15T15:29:08,739 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,739 directory, all directories are treated like packages. 2024-05-15T15:29:08,739 ******************************************************************************** 2024-05-15T15:29:08,741 !! 2024-05-15T15:29:08,741 check.warn(importable) 2024-05-15T15:29:08,741 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nanostat' is absent from the `packages` configuration. 2024-05-15T15:29:08,742 !! 2024-05-15T15:29:08,742 ******************************************************************************** 2024-05-15T15:29:08,743 ############################ 2024-05-15T15:29:08,743 # Package would be ignored # 2024-05-15T15:29:08,743 ############################ 2024-05-15T15:29:08,744 Python recognizes 'multiqc.modules.nanostat' as an importable package[^1], 2024-05-15T15:29:08,744 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,745 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,746 package, please make sure that 'multiqc.modules.nanostat' is explicitly added 2024-05-15T15:29:08,746 to the `packages` configuration field. 2024-05-15T15:29:08,747 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,747 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,747 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,748 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,749 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,750 If you don't want 'multiqc.modules.nanostat' to be distributed and are 2024-05-15T15:29:08,750 already explicitly excluding 'multiqc.modules.nanostat' via 2024-05-15T15:29:08,750 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,751 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,751 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,752 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,753 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,755 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,756 even if it does not contain any `.py` files. 2024-05-15T15:29:08,756 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,757 directory, all directories are treated like packages. 2024-05-15T15:29:08,757 ******************************************************************************** 2024-05-15T15:29:08,758 !! 2024-05-15T15:29:08,758 check.warn(importable) 2024-05-15T15:29:08,759 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nextclade' is absent from the `packages` configuration. 2024-05-15T15:29:08,759 !! 2024-05-15T15:29:08,760 ******************************************************************************** 2024-05-15T15:29:08,761 ############################ 2024-05-15T15:29:08,761 # Package would be ignored # 2024-05-15T15:29:08,762 ############################ 2024-05-15T15:29:08,762 Python recognizes 'multiqc.modules.nextclade' as an importable package[^1], 2024-05-15T15:29:08,762 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,763 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,764 package, please make sure that 'multiqc.modules.nextclade' is explicitly added 2024-05-15T15:29:08,765 to the `packages` configuration field. 2024-05-15T15:29:08,766 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,769 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,769 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,770 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,771 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,771 If you don't want 'multiqc.modules.nextclade' to be distributed and are 2024-05-15T15:29:08,772 already explicitly excluding 'multiqc.modules.nextclade' via 2024-05-15T15:29:08,772 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,773 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,773 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,774 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,774 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,776 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,776 even if it does not contain any `.py` files. 2024-05-15T15:29:08,776 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,777 directory, all directories are treated like packages. 2024-05-15T15:29:08,777 ******************************************************************************** 2024-05-15T15:29:08,778 !! 2024-05-15T15:29:08,778 check.warn(importable) 2024-05-15T15:29:08,779 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ngsderive' is absent from the `packages` configuration. 2024-05-15T15:29:08,779 !! 2024-05-15T15:29:08,780 ******************************************************************************** 2024-05-15T15:29:08,781 ############################ 2024-05-15T15:29:08,781 # Package would be ignored # 2024-05-15T15:29:08,781 ############################ 2024-05-15T15:29:08,782 Python recognizes 'multiqc.modules.ngsderive' as an importable package[^1], 2024-05-15T15:29:08,783 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,784 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,785 package, please make sure that 'multiqc.modules.ngsderive' is explicitly added 2024-05-15T15:29:08,785 to the `packages` configuration field. 2024-05-15T15:29:08,786 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,787 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,787 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,788 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,789 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,790 If you don't want 'multiqc.modules.ngsderive' to be distributed and are 2024-05-15T15:29:08,790 already explicitly excluding 'multiqc.modules.ngsderive' via 2024-05-15T15:29:08,791 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,791 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,792 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,793 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,794 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,796 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,796 even if it does not contain any `.py` files. 2024-05-15T15:29:08,796 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,797 directory, all directories are treated like packages. 2024-05-15T15:29:08,797 ******************************************************************************** 2024-05-15T15:29:08,798 !! 2024-05-15T15:29:08,798 check.warn(importable) 2024-05-15T15:29:08,798 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nonpareil' is absent from the `packages` configuration. 2024-05-15T15:29:08,799 !! 2024-05-15T15:29:08,799 ******************************************************************************** 2024-05-15T15:29:08,800 ############################ 2024-05-15T15:29:08,800 # Package would be ignored # 2024-05-15T15:29:08,801 ############################ 2024-05-15T15:29:08,805 Python recognizes 'multiqc.modules.nonpareil' as an importable package[^1], 2024-05-15T15:29:08,805 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,806 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,806 package, please make sure that 'multiqc.modules.nonpareil' is explicitly added 2024-05-15T15:29:08,806 to the `packages` configuration field. 2024-05-15T15:29:08,807 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,808 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,808 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,809 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,810 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,811 If you don't want 'multiqc.modules.nonpareil' to be distributed and are 2024-05-15T15:29:08,811 already explicitly excluding 'multiqc.modules.nonpareil' via 2024-05-15T15:29:08,812 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,812 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,812 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,813 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,815 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,816 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,817 even if it does not contain any `.py` files. 2024-05-15T15:29:08,817 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,818 directory, all directories are treated like packages. 2024-05-15T15:29:08,818 ******************************************************************************** 2024-05-15T15:29:08,819 !! 2024-05-15T15:29:08,819 check.warn(importable) 2024-05-15T15:29:08,820 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.odgi' is absent from the `packages` configuration. 2024-05-15T15:29:08,820 !! 2024-05-15T15:29:08,822 ******************************************************************************** 2024-05-15T15:29:08,822 ############################ 2024-05-15T15:29:08,823 # Package would be ignored # 2024-05-15T15:29:08,823 ############################ 2024-05-15T15:29:08,824 Python recognizes 'multiqc.modules.odgi' as an importable package[^1], 2024-05-15T15:29:08,825 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,825 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,826 package, please make sure that 'multiqc.modules.odgi' is explicitly added 2024-05-15T15:29:08,826 to the `packages` configuration field. 2024-05-15T15:29:08,827 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,827 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,827 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,828 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,829 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,830 If you don't want 'multiqc.modules.odgi' to be distributed and are 2024-05-15T15:29:08,830 already explicitly excluding 'multiqc.modules.odgi' via 2024-05-15T15:29:08,830 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,831 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,831 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,832 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,833 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,834 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,835 even if it does not contain any `.py` files. 2024-05-15T15:29:08,835 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,836 directory, all directories are treated like packages. 2024-05-15T15:29:08,837 ******************************************************************************** 2024-05-15T15:29:08,838 !! 2024-05-15T15:29:08,838 check.warn(importable) 2024-05-15T15:29:08,839 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.optitype' is absent from the `packages` configuration. 2024-05-15T15:29:08,839 !! 2024-05-15T15:29:08,841 ******************************************************************************** 2024-05-15T15:29:08,841 ############################ 2024-05-15T15:29:08,842 # Package would be ignored # 2024-05-15T15:29:08,843 ############################ 2024-05-15T15:29:08,843 Python recognizes 'multiqc.modules.optitype' as an importable package[^1], 2024-05-15T15:29:08,844 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,845 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,845 package, please make sure that 'multiqc.modules.optitype' is explicitly added 2024-05-15T15:29:08,845 to the `packages` configuration field. 2024-05-15T15:29:08,846 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,847 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,847 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,848 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,849 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,850 If you don't want 'multiqc.modules.optitype' to be distributed and are 2024-05-15T15:29:08,851 already explicitly excluding 'multiqc.modules.optitype' via 2024-05-15T15:29:08,851 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,852 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,853 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,853 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,854 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,855 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,855 even if it does not contain any `.py` files. 2024-05-15T15:29:08,856 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,856 directory, all directories are treated like packages. 2024-05-15T15:29:08,856 ******************************************************************************** 2024-05-15T15:29:08,857 !! 2024-05-15T15:29:08,857 check.warn(importable) 2024-05-15T15:29:08,858 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pangolin' is absent from the `packages` configuration. 2024-05-15T15:29:08,858 !! 2024-05-15T15:29:08,859 ******************************************************************************** 2024-05-15T15:29:08,859 ############################ 2024-05-15T15:29:08,860 # Package would be ignored # 2024-05-15T15:29:08,860 ############################ 2024-05-15T15:29:08,861 Python recognizes 'multiqc.modules.pangolin' as an importable package[^1], 2024-05-15T15:29:08,861 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,862 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,863 package, please make sure that 'multiqc.modules.pangolin' is explicitly added 2024-05-15T15:29:08,864 to the `packages` configuration field. 2024-05-15T15:29:08,865 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,865 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,866 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,867 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,868 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,869 If you don't want 'multiqc.modules.pangolin' to be distributed and are 2024-05-15T15:29:08,869 already explicitly excluding 'multiqc.modules.pangolin' via 2024-05-15T15:29:08,870 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,870 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,871 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,872 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,873 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,874 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,875 even if it does not contain any `.py` files. 2024-05-15T15:29:08,875 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,875 directory, all directories are treated like packages. 2024-05-15T15:29:08,876 ******************************************************************************** 2024-05-15T15:29:08,877 !! 2024-05-15T15:29:08,878 check.warn(importable) 2024-05-15T15:29:08,878 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pbmarkdup' is absent from the `packages` configuration. 2024-05-15T15:29:08,879 !! 2024-05-15T15:29:08,880 ******************************************************************************** 2024-05-15T15:29:08,880 ############################ 2024-05-15T15:29:08,881 # Package would be ignored # 2024-05-15T15:29:08,881 ############################ 2024-05-15T15:29:08,881 Python recognizes 'multiqc.modules.pbmarkdup' as an importable package[^1], 2024-05-15T15:29:08,881 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,882 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,882 package, please make sure that 'multiqc.modules.pbmarkdup' is explicitly added 2024-05-15T15:29:08,883 to the `packages` configuration field. 2024-05-15T15:29:08,883 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,884 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,884 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,885 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,886 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,886 If you don't want 'multiqc.modules.pbmarkdup' to be distributed and are 2024-05-15T15:29:08,887 already explicitly excluding 'multiqc.modules.pbmarkdup' via 2024-05-15T15:29:08,887 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,887 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,888 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,889 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,890 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,892 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,892 even if it does not contain any `.py` files. 2024-05-15T15:29:08,893 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,893 directory, all directories are treated like packages. 2024-05-15T15:29:08,894 ******************************************************************************** 2024-05-15T15:29:08,895 !! 2024-05-15T15:29:08,896 check.warn(importable) 2024-05-15T15:29:08,896 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.peddy' is absent from the `packages` configuration. 2024-05-15T15:29:08,897 !! 2024-05-15T15:29:08,898 ******************************************************************************** 2024-05-15T15:29:08,898 ############################ 2024-05-15T15:29:08,899 # Package would be ignored # 2024-05-15T15:29:08,900 ############################ 2024-05-15T15:29:08,900 Python recognizes 'multiqc.modules.peddy' as an importable package[^1], 2024-05-15T15:29:08,901 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,902 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,903 package, please make sure that 'multiqc.modules.peddy' is explicitly added 2024-05-15T15:29:08,903 to the `packages` configuration field. 2024-05-15T15:29:08,904 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,905 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,905 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,907 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,908 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,909 If you don't want 'multiqc.modules.peddy' to be distributed and are 2024-05-15T15:29:08,909 already explicitly excluding 'multiqc.modules.peddy' via 2024-05-15T15:29:08,909 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,910 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,910 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,911 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,912 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,913 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,914 even if it does not contain any `.py` files. 2024-05-15T15:29:08,914 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,915 directory, all directories are treated like packages. 2024-05-15T15:29:08,915 ******************************************************************************** 2024-05-15T15:29:08,916 !! 2024-05-15T15:29:08,917 check.warn(importable) 2024-05-15T15:29:08,917 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.phantompeakqualtools' is absent from the `packages` configuration. 2024-05-15T15:29:08,918 !! 2024-05-15T15:29:08,919 ******************************************************************************** 2024-05-15T15:29:08,919 ############################ 2024-05-15T15:29:08,920 # Package would be ignored # 2024-05-15T15:29:08,921 ############################ 2024-05-15T15:29:08,921 Python recognizes 'multiqc.modules.phantompeakqualtools' as an importable package[^1], 2024-05-15T15:29:08,922 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,923 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,924 package, please make sure that 'multiqc.modules.phantompeakqualtools' is explicitly added 2024-05-15T15:29:08,925 to the `packages` configuration field. 2024-05-15T15:29:08,926 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,927 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,927 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,928 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,929 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,930 If you don't want 'multiqc.modules.phantompeakqualtools' to be distributed and are 2024-05-15T15:29:08,931 already explicitly excluding 'multiqc.modules.phantompeakqualtools' via 2024-05-15T15:29:08,932 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,932 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,933 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,934 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,935 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,938 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,939 even if it does not contain any `.py` files. 2024-05-15T15:29:08,939 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,940 directory, all directories are treated like packages. 2024-05-15T15:29:08,941 ******************************************************************************** 2024-05-15T15:29:08,942 !! 2024-05-15T15:29:08,942 check.warn(importable) 2024-05-15T15:29:08,943 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.picard' is absent from the `packages` configuration. 2024-05-15T15:29:08,943 !! 2024-05-15T15:29:08,945 ******************************************************************************** 2024-05-15T15:29:08,945 ############################ 2024-05-15T15:29:08,946 # Package would be ignored # 2024-05-15T15:29:08,946 ############################ 2024-05-15T15:29:08,947 Python recognizes 'multiqc.modules.picard' as an importable package[^1], 2024-05-15T15:29:08,947 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,948 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,949 package, please make sure that 'multiqc.modules.picard' is explicitly added 2024-05-15T15:29:08,949 to the `packages` configuration field. 2024-05-15T15:29:08,950 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,951 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,951 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,952 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,953 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,955 If you don't want 'multiqc.modules.picard' to be distributed and are 2024-05-15T15:29:08,955 already explicitly excluding 'multiqc.modules.picard' via 2024-05-15T15:29:08,956 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,957 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,957 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,958 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,959 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,961 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,962 even if it does not contain any `.py` files. 2024-05-15T15:29:08,963 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,963 directory, all directories are treated like packages. 2024-05-15T15:29:08,964 ******************************************************************************** 2024-05-15T15:29:08,965 !! 2024-05-15T15:29:08,966 check.warn(importable) 2024-05-15T15:29:08,966 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.porechop' is absent from the `packages` configuration. 2024-05-15T15:29:08,967 !! 2024-05-15T15:29:08,968 ******************************************************************************** 2024-05-15T15:29:08,969 ############################ 2024-05-15T15:29:08,969 # Package would be ignored # 2024-05-15T15:29:08,970 ############################ 2024-05-15T15:29:08,971 Python recognizes 'multiqc.modules.porechop' as an importable package[^1], 2024-05-15T15:29:08,971 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,973 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,973 package, please make sure that 'multiqc.modules.porechop' is explicitly added 2024-05-15T15:29:08,974 to the `packages` configuration field. 2024-05-15T15:29:08,975 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,975 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,976 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,977 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,978 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,979 If you don't want 'multiqc.modules.porechop' to be distributed and are 2024-05-15T15:29:08,979 already explicitly excluding 'multiqc.modules.porechop' via 2024-05-15T15:29:08,979 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:08,980 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:08,980 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:08,981 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:08,982 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:08,983 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:08,984 even if it does not contain any `.py` files. 2024-05-15T15:29:08,985 On the other hand, currently there is no concept of package data 2024-05-15T15:29:08,985 directory, all directories are treated like packages. 2024-05-15T15:29:08,986 ******************************************************************************** 2024-05-15T15:29:08,987 !! 2024-05-15T15:29:08,987 check.warn(importable) 2024-05-15T15:29:08,988 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.preseq' is absent from the `packages` configuration. 2024-05-15T15:29:08,988 !! 2024-05-15T15:29:08,989 ******************************************************************************** 2024-05-15T15:29:08,990 ############################ 2024-05-15T15:29:08,990 # Package would be ignored # 2024-05-15T15:29:08,991 ############################ 2024-05-15T15:29:08,992 Python recognizes 'multiqc.modules.preseq' as an importable package[^1], 2024-05-15T15:29:08,992 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:08,993 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:08,994 package, please make sure that 'multiqc.modules.preseq' is explicitly added 2024-05-15T15:29:08,994 to the `packages` configuration field. 2024-05-15T15:29:08,995 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:08,996 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:08,996 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:08,997 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:08,998 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:08,999 If you don't want 'multiqc.modules.preseq' to be distributed and are 2024-05-15T15:29:08,999 already explicitly excluding 'multiqc.modules.preseq' via 2024-05-15T15:29:09,000 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,001 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,001 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,002 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,003 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,004 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,004 even if it does not contain any `.py` files. 2024-05-15T15:29:09,005 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,005 directory, all directories are treated like packages. 2024-05-15T15:29:09,005 ******************************************************************************** 2024-05-15T15:29:09,006 !! 2024-05-15T15:29:09,006 check.warn(importable) 2024-05-15T15:29:09,007 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.prinseqplusplus' is absent from the `packages` configuration. 2024-05-15T15:29:09,007 !! 2024-05-15T15:29:09,008 ******************************************************************************** 2024-05-15T15:29:09,008 ############################ 2024-05-15T15:29:09,008 # Package would be ignored # 2024-05-15T15:29:09,009 ############################ 2024-05-15T15:29:09,009 Python recognizes 'multiqc.modules.prinseqplusplus' as an importable package[^1], 2024-05-15T15:29:09,009 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,010 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,011 package, please make sure that 'multiqc.modules.prinseqplusplus' is explicitly added 2024-05-15T15:29:09,011 to the `packages` configuration field. 2024-05-15T15:29:09,013 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,013 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,014 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,015 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,016 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,016 If you don't want 'multiqc.modules.prinseqplusplus' to be distributed and are 2024-05-15T15:29:09,017 already explicitly excluding 'multiqc.modules.prinseqplusplus' via 2024-05-15T15:29:09,017 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,018 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,019 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,019 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,020 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,021 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,022 even if it does not contain any `.py` files. 2024-05-15T15:29:09,022 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,023 directory, all directories are treated like packages. 2024-05-15T15:29:09,023 ******************************************************************************** 2024-05-15T15:29:09,025 !! 2024-05-15T15:29:09,025 check.warn(importable) 2024-05-15T15:29:09,026 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.prokka' is absent from the `packages` configuration. 2024-05-15T15:29:09,026 !! 2024-05-15T15:29:09,027 ******************************************************************************** 2024-05-15T15:29:09,028 ############################ 2024-05-15T15:29:09,029 # Package would be ignored # 2024-05-15T15:29:09,029 ############################ 2024-05-15T15:29:09,029 Python recognizes 'multiqc.modules.prokka' as an importable package[^1], 2024-05-15T15:29:09,030 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,030 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,031 package, please make sure that 'multiqc.modules.prokka' is explicitly added 2024-05-15T15:29:09,031 to the `packages` configuration field. 2024-05-15T15:29:09,032 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,032 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,033 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,033 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,034 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,035 If you don't want 'multiqc.modules.prokka' to be distributed and are 2024-05-15T15:29:09,035 already explicitly excluding 'multiqc.modules.prokka' via 2024-05-15T15:29:09,036 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,036 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,037 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,037 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,038 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,039 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,040 even if it does not contain any `.py` files. 2024-05-15T15:29:09,040 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,041 directory, all directories are treated like packages. 2024-05-15T15:29:09,041 ******************************************************************************** 2024-05-15T15:29:09,042 !! 2024-05-15T15:29:09,042 check.warn(importable) 2024-05-15T15:29:09,043 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.purple' is absent from the `packages` configuration. 2024-05-15T15:29:09,043 !! 2024-05-15T15:29:09,044 ******************************************************************************** 2024-05-15T15:29:09,045 ############################ 2024-05-15T15:29:09,045 # Package would be ignored # 2024-05-15T15:29:09,046 ############################ 2024-05-15T15:29:09,046 Python recognizes 'multiqc.modules.purple' as an importable package[^1], 2024-05-15T15:29:09,047 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,047 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,048 package, please make sure that 'multiqc.modules.purple' is explicitly added 2024-05-15T15:29:09,049 to the `packages` configuration field. 2024-05-15T15:29:09,049 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,050 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,050 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,051 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,053 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,054 If you don't want 'multiqc.modules.purple' to be distributed and are 2024-05-15T15:29:09,054 already explicitly excluding 'multiqc.modules.purple' via 2024-05-15T15:29:09,054 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,055 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,055 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,055 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,056 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,057 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,058 even if it does not contain any `.py` files. 2024-05-15T15:29:09,058 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,058 directory, all directories are treated like packages. 2024-05-15T15:29:09,059 ******************************************************************************** 2024-05-15T15:29:09,059 !! 2024-05-15T15:29:09,060 check.warn(importable) 2024-05-15T15:29:09,060 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pychopper' is absent from the `packages` configuration. 2024-05-15T15:29:09,060 !! 2024-05-15T15:29:09,061 ******************************************************************************** 2024-05-15T15:29:09,061 ############################ 2024-05-15T15:29:09,062 # Package would be ignored # 2024-05-15T15:29:09,062 ############################ 2024-05-15T15:29:09,063 Python recognizes 'multiqc.modules.pychopper' as an importable package[^1], 2024-05-15T15:29:09,063 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,064 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,065 package, please make sure that 'multiqc.modules.pychopper' is explicitly added 2024-05-15T15:29:09,066 to the `packages` configuration field. 2024-05-15T15:29:09,066 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,067 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,067 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,069 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,069 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,070 If you don't want 'multiqc.modules.pychopper' to be distributed and are 2024-05-15T15:29:09,071 already explicitly excluding 'multiqc.modules.pychopper' via 2024-05-15T15:29:09,071 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,072 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,072 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,073 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,074 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,075 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,076 even if it does not contain any `.py` files. 2024-05-15T15:29:09,076 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,077 directory, all directories are treated like packages. 2024-05-15T15:29:09,077 ******************************************************************************** 2024-05-15T15:29:09,078 !! 2024-05-15T15:29:09,079 check.warn(importable) 2024-05-15T15:29:09,079 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pycoqc' is absent from the `packages` configuration. 2024-05-15T15:29:09,079 !! 2024-05-15T15:29:09,080 ******************************************************************************** 2024-05-15T15:29:09,080 ############################ 2024-05-15T15:29:09,081 # Package would be ignored # 2024-05-15T15:29:09,081 ############################ 2024-05-15T15:29:09,082 Python recognizes 'multiqc.modules.pycoqc' as an importable package[^1], 2024-05-15T15:29:09,082 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,083 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,083 package, please make sure that 'multiqc.modules.pycoqc' is explicitly added 2024-05-15T15:29:09,083 to the `packages` configuration field. 2024-05-15T15:29:09,084 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,085 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,085 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,086 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,087 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,087 If you don't want 'multiqc.modules.pycoqc' to be distributed and are 2024-05-15T15:29:09,088 already explicitly excluding 'multiqc.modules.pycoqc' via 2024-05-15T15:29:09,088 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,089 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,089 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,090 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,091 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,093 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,093 even if it does not contain any `.py` files. 2024-05-15T15:29:09,094 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,094 directory, all directories are treated like packages. 2024-05-15T15:29:09,095 ******************************************************************************** 2024-05-15T15:29:09,096 !! 2024-05-15T15:29:09,096 check.warn(importable) 2024-05-15T15:29:09,097 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qc3C' is absent from the `packages` configuration. 2024-05-15T15:29:09,097 !! 2024-05-15T15:29:09,098 ******************************************************************************** 2024-05-15T15:29:09,099 ############################ 2024-05-15T15:29:09,099 # Package would be ignored # 2024-05-15T15:29:09,100 ############################ 2024-05-15T15:29:09,100 Python recognizes 'multiqc.modules.qc3C' as an importable package[^1], 2024-05-15T15:29:09,101 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,102 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,102 package, please make sure that 'multiqc.modules.qc3C' is explicitly added 2024-05-15T15:29:09,103 to the `packages` configuration field. 2024-05-15T15:29:09,104 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,104 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,105 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,106 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,106 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,107 If you don't want 'multiqc.modules.qc3C' to be distributed and are 2024-05-15T15:29:09,107 already explicitly excluding 'multiqc.modules.qc3C' via 2024-05-15T15:29:09,108 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,108 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,108 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,109 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,110 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,111 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,111 even if it does not contain any `.py` files. 2024-05-15T15:29:09,111 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,112 directory, all directories are treated like packages. 2024-05-15T15:29:09,112 ******************************************************************************** 2024-05-15T15:29:09,113 !! 2024-05-15T15:29:09,113 check.warn(importable) 2024-05-15T15:29:09,114 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qorts' is absent from the `packages` configuration. 2024-05-15T15:29:09,114 !! 2024-05-15T15:29:09,115 ******************************************************************************** 2024-05-15T15:29:09,115 ############################ 2024-05-15T15:29:09,116 # Package would be ignored # 2024-05-15T15:29:09,117 ############################ 2024-05-15T15:29:09,117 Python recognizes 'multiqc.modules.qorts' as an importable package[^1], 2024-05-15T15:29:09,118 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,118 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,119 package, please make sure that 'multiqc.modules.qorts' is explicitly added 2024-05-15T15:29:09,119 to the `packages` configuration field. 2024-05-15T15:29:09,120 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,121 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,121 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,122 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,123 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,124 If you don't want 'multiqc.modules.qorts' to be distributed and are 2024-05-15T15:29:09,124 already explicitly excluding 'multiqc.modules.qorts' via 2024-05-15T15:29:09,125 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,125 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,125 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,126 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,128 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,129 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,129 even if it does not contain any `.py` files. 2024-05-15T15:29:09,130 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,130 directory, all directories are treated like packages. 2024-05-15T15:29:09,130 ******************************************************************************** 2024-05-15T15:29:09,131 !! 2024-05-15T15:29:09,132 check.warn(importable) 2024-05-15T15:29:09,132 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qualimap' is absent from the `packages` configuration. 2024-05-15T15:29:09,132 !! 2024-05-15T15:29:09,133 ******************************************************************************** 2024-05-15T15:29:09,133 ############################ 2024-05-15T15:29:09,134 # Package would be ignored # 2024-05-15T15:29:09,134 ############################ 2024-05-15T15:29:09,134 Python recognizes 'multiqc.modules.qualimap' as an importable package[^1], 2024-05-15T15:29:09,135 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,135 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,136 package, please make sure that 'multiqc.modules.qualimap' is explicitly added 2024-05-15T15:29:09,136 to the `packages` configuration field. 2024-05-15T15:29:09,137 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,138 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,139 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,140 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,141 If you don't want 'multiqc.modules.qualimap' to be distributed and are 2024-05-15T15:29:09,141 already explicitly excluding 'multiqc.modules.qualimap' via 2024-05-15T15:29:09,142 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,142 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,143 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,144 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,145 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,146 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,147 even if it does not contain any `.py` files. 2024-05-15T15:29:09,147 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,148 directory, all directories are treated like packages. 2024-05-15T15:29:09,148 ******************************************************************************** 2024-05-15T15:29:09,149 !! 2024-05-15T15:29:09,149 check.warn(importable) 2024-05-15T15:29:09,150 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.quast' is absent from the `packages` configuration. 2024-05-15T15:29:09,150 !! 2024-05-15T15:29:09,151 ******************************************************************************** 2024-05-15T15:29:09,152 ############################ 2024-05-15T15:29:09,153 # Package would be ignored # 2024-05-15T15:29:09,153 ############################ 2024-05-15T15:29:09,154 Python recognizes 'multiqc.modules.quast' as an importable package[^1], 2024-05-15T15:29:09,154 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,155 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,155 package, please make sure that 'multiqc.modules.quast' is explicitly added 2024-05-15T15:29:09,156 to the `packages` configuration field. 2024-05-15T15:29:09,157 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,157 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,157 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,158 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,158 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,159 If you don't want 'multiqc.modules.quast' to be distributed and are 2024-05-15T15:29:09,159 already explicitly excluding 'multiqc.modules.quast' via 2024-05-15T15:29:09,160 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,160 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,161 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,162 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,163 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,164 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,164 even if it does not contain any `.py` files. 2024-05-15T15:29:09,165 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,165 directory, all directories are treated like packages. 2024-05-15T15:29:09,166 ******************************************************************************** 2024-05-15T15:29:09,167 !! 2024-05-15T15:29:09,167 check.warn(importable) 2024-05-15T15:29:09,168 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rna_seqc' is absent from the `packages` configuration. 2024-05-15T15:29:09,168 !! 2024-05-15T15:29:09,169 ******************************************************************************** 2024-05-15T15:29:09,170 ############################ 2024-05-15T15:29:09,170 # Package would be ignored # 2024-05-15T15:29:09,171 ############################ 2024-05-15T15:29:09,171 Python recognizes 'multiqc.modules.rna_seqc' as an importable package[^1], 2024-05-15T15:29:09,172 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,173 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,173 package, please make sure that 'multiqc.modules.rna_seqc' is explicitly added 2024-05-15T15:29:09,173 to the `packages` configuration field. 2024-05-15T15:29:09,174 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,175 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,175 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,177 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,178 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,178 If you don't want 'multiqc.modules.rna_seqc' to be distributed and are 2024-05-15T15:29:09,179 already explicitly excluding 'multiqc.modules.rna_seqc' via 2024-05-15T15:29:09,180 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,180 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,181 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,182 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,182 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,183 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,184 even if it does not contain any `.py` files. 2024-05-15T15:29:09,184 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,184 directory, all directories are treated like packages. 2024-05-15T15:29:09,185 ******************************************************************************** 2024-05-15T15:29:09,186 !! 2024-05-15T15:29:09,186 check.warn(importable) 2024-05-15T15:29:09,186 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rockhopper' is absent from the `packages` configuration. 2024-05-15T15:29:09,187 !! 2024-05-15T15:29:09,187 ******************************************************************************** 2024-05-15T15:29:09,188 ############################ 2024-05-15T15:29:09,188 # Package would be ignored # 2024-05-15T15:29:09,189 ############################ 2024-05-15T15:29:09,189 Python recognizes 'multiqc.modules.rockhopper' as an importable package[^1], 2024-05-15T15:29:09,189 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,190 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,191 package, please make sure that 'multiqc.modules.rockhopper' is explicitly added 2024-05-15T15:29:09,191 to the `packages` configuration field. 2024-05-15T15:29:09,192 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,192 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,193 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,194 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,194 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,195 If you don't want 'multiqc.modules.rockhopper' to be distributed and are 2024-05-15T15:29:09,196 already explicitly excluding 'multiqc.modules.rockhopper' via 2024-05-15T15:29:09,196 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,197 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,198 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,199 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,200 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,201 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,201 even if it does not contain any `.py` files. 2024-05-15T15:29:09,202 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,202 directory, all directories are treated like packages. 2024-05-15T15:29:09,203 ******************************************************************************** 2024-05-15T15:29:09,204 !! 2024-05-15T15:29:09,204 check.warn(importable) 2024-05-15T15:29:09,205 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rsem' is absent from the `packages` configuration. 2024-05-15T15:29:09,205 !! 2024-05-15T15:29:09,206 ******************************************************************************** 2024-05-15T15:29:09,207 ############################ 2024-05-15T15:29:09,207 # Package would be ignored # 2024-05-15T15:29:09,207 ############################ 2024-05-15T15:29:09,208 Python recognizes 'multiqc.modules.rsem' as an importable package[^1], 2024-05-15T15:29:09,208 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,209 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,209 package, please make sure that 'multiqc.modules.rsem' is explicitly added 2024-05-15T15:29:09,210 to the `packages` configuration field. 2024-05-15T15:29:09,210 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,211 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,211 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,212 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,213 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,213 If you don't want 'multiqc.modules.rsem' to be distributed and are 2024-05-15T15:29:09,214 already explicitly excluding 'multiqc.modules.rsem' via 2024-05-15T15:29:09,214 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,214 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,215 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,216 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,217 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,218 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,219 even if it does not contain any `.py` files. 2024-05-15T15:29:09,220 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,220 directory, all directories are treated like packages. 2024-05-15T15:29:09,221 ******************************************************************************** 2024-05-15T15:29:09,222 !! 2024-05-15T15:29:09,222 check.warn(importable) 2024-05-15T15:29:09,223 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rseqc' is absent from the `packages` configuration. 2024-05-15T15:29:09,223 !! 2024-05-15T15:29:09,224 ******************************************************************************** 2024-05-15T15:29:09,225 ############################ 2024-05-15T15:29:09,225 # Package would be ignored # 2024-05-15T15:29:09,226 ############################ 2024-05-15T15:29:09,226 Python recognizes 'multiqc.modules.rseqc' as an importable package[^1], 2024-05-15T15:29:09,227 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,227 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,228 package, please make sure that 'multiqc.modules.rseqc' is explicitly added 2024-05-15T15:29:09,229 to the `packages` configuration field. 2024-05-15T15:29:09,230 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,230 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,231 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,232 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,233 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,234 If you don't want 'multiqc.modules.rseqc' to be distributed and are 2024-05-15T15:29:09,234 already explicitly excluding 'multiqc.modules.rseqc' via 2024-05-15T15:29:09,235 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,235 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,236 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,237 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,237 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,238 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,239 even if it does not contain any `.py` files. 2024-05-15T15:29:09,239 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,239 directory, all directories are treated like packages. 2024-05-15T15:29:09,240 ******************************************************************************** 2024-05-15T15:29:09,241 !! 2024-05-15T15:29:09,241 check.warn(importable) 2024-05-15T15:29:09,241 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rseqc.assets.js' is absent from the `packages` configuration. 2024-05-15T15:29:09,242 !! 2024-05-15T15:29:09,243 ******************************************************************************** 2024-05-15T15:29:09,243 ############################ 2024-05-15T15:29:09,243 # Package would be ignored # 2024-05-15T15:29:09,244 ############################ 2024-05-15T15:29:09,245 Python recognizes 'multiqc.modules.rseqc.assets.js' as an importable package[^1], 2024-05-15T15:29:09,245 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,246 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,246 package, please make sure that 'multiqc.modules.rseqc.assets.js' is explicitly added 2024-05-15T15:29:09,247 to the `packages` configuration field. 2024-05-15T15:29:09,248 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,249 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,249 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,250 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,251 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,252 If you don't want 'multiqc.modules.rseqc.assets.js' to be distributed and are 2024-05-15T15:29:09,252 already explicitly excluding 'multiqc.modules.rseqc.assets.js' via 2024-05-15T15:29:09,253 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,253 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,254 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,255 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,256 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,257 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,258 even if it does not contain any `.py` files. 2024-05-15T15:29:09,258 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,259 directory, all directories are treated like packages. 2024-05-15T15:29:09,260 ******************************************************************************** 2024-05-15T15:29:09,260 !! 2024-05-15T15:29:09,261 check.warn(importable) 2024-05-15T15:29:09,261 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.salmon' is absent from the `packages` configuration. 2024-05-15T15:29:09,262 !! 2024-05-15T15:29:09,263 ******************************************************************************** 2024-05-15T15:29:09,263 ############################ 2024-05-15T15:29:09,263 # Package would be ignored # 2024-05-15T15:29:09,264 ############################ 2024-05-15T15:29:09,264 Python recognizes 'multiqc.modules.salmon' as an importable package[^1], 2024-05-15T15:29:09,265 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,265 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,266 package, please make sure that 'multiqc.modules.salmon' is explicitly added 2024-05-15T15:29:09,266 to the `packages` configuration field. 2024-05-15T15:29:09,267 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,267 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,267 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,268 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,269 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,270 If you don't want 'multiqc.modules.salmon' to be distributed and are 2024-05-15T15:29:09,270 already explicitly excluding 'multiqc.modules.salmon' via 2024-05-15T15:29:09,271 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,272 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,272 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,273 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,274 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,276 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,276 even if it does not contain any `.py` files. 2024-05-15T15:29:09,277 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,277 directory, all directories are treated like packages. 2024-05-15T15:29:09,278 ******************************************************************************** 2024-05-15T15:29:09,279 !! 2024-05-15T15:29:09,279 check.warn(importable) 2024-05-15T15:29:09,279 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sambamba' is absent from the `packages` configuration. 2024-05-15T15:29:09,280 !! 2024-05-15T15:29:09,281 ******************************************************************************** 2024-05-15T15:29:09,281 ############################ 2024-05-15T15:29:09,282 # Package would be ignored # 2024-05-15T15:29:09,282 ############################ 2024-05-15T15:29:09,283 Python recognizes 'multiqc.modules.sambamba' as an importable package[^1], 2024-05-15T15:29:09,283 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,285 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,285 package, please make sure that 'multiqc.modules.sambamba' is explicitly added 2024-05-15T15:29:09,286 to the `packages` configuration field. 2024-05-15T15:29:09,287 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,287 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,287 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,288 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,289 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,289 If you don't want 'multiqc.modules.sambamba' to be distributed and are 2024-05-15T15:29:09,290 already explicitly excluding 'multiqc.modules.sambamba' via 2024-05-15T15:29:09,290 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,290 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,290 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,291 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,292 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,293 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,293 even if it does not contain any `.py` files. 2024-05-15T15:29:09,294 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,294 directory, all directories are treated like packages. 2024-05-15T15:29:09,294 ******************************************************************************** 2024-05-15T15:29:09,295 !! 2024-05-15T15:29:09,296 check.warn(importable) 2024-05-15T15:29:09,296 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.samblaster' is absent from the `packages` configuration. 2024-05-15T15:29:09,297 !! 2024-05-15T15:29:09,298 ******************************************************************************** 2024-05-15T15:29:09,298 ############################ 2024-05-15T15:29:09,299 # Package would be ignored # 2024-05-15T15:29:09,299 ############################ 2024-05-15T15:29:09,300 Python recognizes 'multiqc.modules.samblaster' as an importable package[^1], 2024-05-15T15:29:09,301 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,302 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,302 package, please make sure that 'multiqc.modules.samblaster' is explicitly added 2024-05-15T15:29:09,302 to the `packages` configuration field. 2024-05-15T15:29:09,303 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,304 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,304 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,305 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,306 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,307 If you don't want 'multiqc.modules.samblaster' to be distributed and are 2024-05-15T15:29:09,308 already explicitly excluding 'multiqc.modules.samblaster' via 2024-05-15T15:29:09,308 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,309 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,309 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,310 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,312 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,313 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,313 even if it does not contain any `.py` files. 2024-05-15T15:29:09,313 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,314 directory, all directories are treated like packages. 2024-05-15T15:29:09,314 ******************************************************************************** 2024-05-15T15:29:09,315 !! 2024-05-15T15:29:09,315 check.warn(importable) 2024-05-15T15:29:09,316 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.samtools' is absent from the `packages` configuration. 2024-05-15T15:29:09,316 !! 2024-05-15T15:29:09,317 ******************************************************************************** 2024-05-15T15:29:09,317 ############################ 2024-05-15T15:29:09,317 # Package would be ignored # 2024-05-15T15:29:09,318 ############################ 2024-05-15T15:29:09,318 Python recognizes 'multiqc.modules.samtools' as an importable package[^1], 2024-05-15T15:29:09,318 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,319 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,319 package, please make sure that 'multiqc.modules.samtools' is explicitly added 2024-05-15T15:29:09,320 to the `packages` configuration field. 2024-05-15T15:29:09,321 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,321 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,322 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,323 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,324 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,325 If you don't want 'multiqc.modules.samtools' to be distributed and are 2024-05-15T15:29:09,325 already explicitly excluding 'multiqc.modules.samtools' via 2024-05-15T15:29:09,326 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,326 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,326 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,327 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,329 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,330 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,330 even if it does not contain any `.py` files. 2024-05-15T15:29:09,331 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,331 directory, all directories are treated like packages. 2024-05-15T15:29:09,332 ******************************************************************************** 2024-05-15T15:29:09,333 !! 2024-05-15T15:29:09,333 check.warn(importable) 2024-05-15T15:29:09,334 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sargasso' is absent from the `packages` configuration. 2024-05-15T15:29:09,334 !! 2024-05-15T15:29:09,335 ******************************************************************************** 2024-05-15T15:29:09,336 ############################ 2024-05-15T15:29:09,336 # Package would be ignored # 2024-05-15T15:29:09,337 ############################ 2024-05-15T15:29:09,337 Python recognizes 'multiqc.modules.sargasso' as an importable package[^1], 2024-05-15T15:29:09,338 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,338 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,339 package, please make sure that 'multiqc.modules.sargasso' is explicitly added 2024-05-15T15:29:09,339 to the `packages` configuration field. 2024-05-15T15:29:09,340 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,340 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,340 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,341 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,342 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,343 If you don't want 'multiqc.modules.sargasso' to be distributed and are 2024-05-15T15:29:09,343 already explicitly excluding 'multiqc.modules.sargasso' via 2024-05-15T15:29:09,343 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,344 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,344 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,345 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,346 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,347 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,348 even if it does not contain any `.py` files. 2024-05-15T15:29:09,348 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,349 directory, all directories are treated like packages. 2024-05-15T15:29:09,349 ******************************************************************************** 2024-05-15T15:29:09,350 !! 2024-05-15T15:29:09,351 check.warn(importable) 2024-05-15T15:29:09,352 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqera_cli' is absent from the `packages` configuration. 2024-05-15T15:29:09,352 !! 2024-05-15T15:29:09,353 ******************************************************************************** 2024-05-15T15:29:09,354 ############################ 2024-05-15T15:29:09,354 # Package would be ignored # 2024-05-15T15:29:09,355 ############################ 2024-05-15T15:29:09,355 Python recognizes 'multiqc.modules.seqera_cli' as an importable package[^1], 2024-05-15T15:29:09,356 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,357 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,357 package, please make sure that 'multiqc.modules.seqera_cli' is explicitly added 2024-05-15T15:29:09,358 to the `packages` configuration field. 2024-05-15T15:29:09,358 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,359 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,360 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,361 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,362 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,363 If you don't want 'multiqc.modules.seqera_cli' to be distributed and are 2024-05-15T15:29:09,363 already explicitly excluding 'multiqc.modules.seqera_cli' via 2024-05-15T15:29:09,364 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,364 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,364 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,365 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,365 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,366 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,367 even if it does not contain any `.py` files. 2024-05-15T15:29:09,367 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,367 directory, all directories are treated like packages. 2024-05-15T15:29:09,368 ******************************************************************************** 2024-05-15T15:29:09,369 !! 2024-05-15T15:29:09,369 check.warn(importable) 2024-05-15T15:29:09,369 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sequali' is absent from the `packages` configuration. 2024-05-15T15:29:09,370 !! 2024-05-15T15:29:09,370 ******************************************************************************** 2024-05-15T15:29:09,371 ############################ 2024-05-15T15:29:09,371 # Package would be ignored # 2024-05-15T15:29:09,371 ############################ 2024-05-15T15:29:09,372 Python recognizes 'multiqc.modules.sequali' as an importable package[^1], 2024-05-15T15:29:09,372 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,373 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,373 package, please make sure that 'multiqc.modules.sequali' is explicitly added 2024-05-15T15:29:09,374 to the `packages` configuration field. 2024-05-15T15:29:09,375 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,376 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,376 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,377 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,378 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,379 If you don't want 'multiqc.modules.sequali' to be distributed and are 2024-05-15T15:29:09,380 already explicitly excluding 'multiqc.modules.sequali' via 2024-05-15T15:29:09,380 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,380 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,381 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,382 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,383 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,384 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,385 even if it does not contain any `.py` files. 2024-05-15T15:29:09,385 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,386 directory, all directories are treated like packages. 2024-05-15T15:29:09,386 ******************************************************************************** 2024-05-15T15:29:09,387 !! 2024-05-15T15:29:09,388 check.warn(importable) 2024-05-15T15:29:09,388 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqwho' is absent from the `packages` configuration. 2024-05-15T15:29:09,389 !! 2024-05-15T15:29:09,390 ******************************************************************************** 2024-05-15T15:29:09,390 ############################ 2024-05-15T15:29:09,390 # Package would be ignored # 2024-05-15T15:29:09,391 ############################ 2024-05-15T15:29:09,391 Python recognizes 'multiqc.modules.seqwho' as an importable package[^1], 2024-05-15T15:29:09,391 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,392 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,393 package, please make sure that 'multiqc.modules.seqwho' is explicitly added 2024-05-15T15:29:09,393 to the `packages` configuration field. 2024-05-15T15:29:09,394 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,394 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,394 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,395 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,396 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,397 If you don't want 'multiqc.modules.seqwho' to be distributed and are 2024-05-15T15:29:09,397 already explicitly excluding 'multiqc.modules.seqwho' via 2024-05-15T15:29:09,397 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,398 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,398 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,399 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,400 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,402 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,402 even if it does not contain any `.py` files. 2024-05-15T15:29:09,402 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,403 directory, all directories are treated like packages. 2024-05-15T15:29:09,403 ******************************************************************************** 2024-05-15T15:29:09,405 !! 2024-05-15T15:29:09,405 check.warn(importable) 2024-05-15T15:29:09,405 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqyclean' is absent from the `packages` configuration. 2024-05-15T15:29:09,406 !! 2024-05-15T15:29:09,407 ******************************************************************************** 2024-05-15T15:29:09,407 ############################ 2024-05-15T15:29:09,408 # Package would be ignored # 2024-05-15T15:29:09,408 ############################ 2024-05-15T15:29:09,409 Python recognizes 'multiqc.modules.seqyclean' as an importable package[^1], 2024-05-15T15:29:09,409 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,410 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,411 package, please make sure that 'multiqc.modules.seqyclean' is explicitly added 2024-05-15T15:29:09,411 to the `packages` configuration field. 2024-05-15T15:29:09,412 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,413 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,413 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,415 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,415 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,416 If you don't want 'multiqc.modules.seqyclean' to be distributed and are 2024-05-15T15:29:09,417 already explicitly excluding 'multiqc.modules.seqyclean' via 2024-05-15T15:29:09,417 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,417 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,418 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,418 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,419 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,420 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,421 even if it does not contain any `.py` files. 2024-05-15T15:29:09,421 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,421 directory, all directories are treated like packages. 2024-05-15T15:29:09,422 ******************************************************************************** 2024-05-15T15:29:09,422 !! 2024-05-15T15:29:09,423 check.warn(importable) 2024-05-15T15:29:09,423 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sexdeterrmine' is absent from the `packages` configuration. 2024-05-15T15:29:09,424 !! 2024-05-15T15:29:09,425 ******************************************************************************** 2024-05-15T15:29:09,425 ############################ 2024-05-15T15:29:09,426 # Package would be ignored # 2024-05-15T15:29:09,426 ############################ 2024-05-15T15:29:09,426 Python recognizes 'multiqc.modules.sexdeterrmine' as an importable package[^1], 2024-05-15T15:29:09,427 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,428 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,428 package, please make sure that 'multiqc.modules.sexdeterrmine' is explicitly added 2024-05-15T15:29:09,429 to the `packages` configuration field. 2024-05-15T15:29:09,430 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,430 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,431 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,431 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,432 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,433 If you don't want 'multiqc.modules.sexdeterrmine' to be distributed and are 2024-05-15T15:29:09,434 already explicitly excluding 'multiqc.modules.sexdeterrmine' via 2024-05-15T15:29:09,434 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,435 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,435 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,436 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,439 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,441 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,441 even if it does not contain any `.py` files. 2024-05-15T15:29:09,442 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,442 directory, all directories are treated like packages. 2024-05-15T15:29:09,443 ******************************************************************************** 2024-05-15T15:29:09,443 !! 2024-05-15T15:29:09,443 check.warn(importable) 2024-05-15T15:29:09,444 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sickle' is absent from the `packages` configuration. 2024-05-15T15:29:09,444 !! 2024-05-15T15:29:09,445 ******************************************************************************** 2024-05-15T15:29:09,445 ############################ 2024-05-15T15:29:09,445 # Package would be ignored # 2024-05-15T15:29:09,446 ############################ 2024-05-15T15:29:09,446 Python recognizes 'multiqc.modules.sickle' as an importable package[^1], 2024-05-15T15:29:09,447 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,448 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,448 package, please make sure that 'multiqc.modules.sickle' is explicitly added 2024-05-15T15:29:09,449 to the `packages` configuration field. 2024-05-15T15:29:09,449 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,450 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,450 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,451 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,452 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,453 If you don't want 'multiqc.modules.sickle' to be distributed and are 2024-05-15T15:29:09,453 already explicitly excluding 'multiqc.modules.sickle' via 2024-05-15T15:29:09,454 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,454 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,455 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,456 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,457 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,459 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,459 even if it does not contain any `.py` files. 2024-05-15T15:29:09,460 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,460 directory, all directories are treated like packages. 2024-05-15T15:29:09,461 ******************************************************************************** 2024-05-15T15:29:09,462 !! 2024-05-15T15:29:09,462 check.warn(importable) 2024-05-15T15:29:09,463 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.skewer' is absent from the `packages` configuration. 2024-05-15T15:29:09,463 !! 2024-05-15T15:29:09,464 ******************************************************************************** 2024-05-15T15:29:09,465 ############################ 2024-05-15T15:29:09,465 # Package would be ignored # 2024-05-15T15:29:09,466 ############################ 2024-05-15T15:29:09,466 Python recognizes 'multiqc.modules.skewer' as an importable package[^1], 2024-05-15T15:29:09,467 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,468 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,469 package, please make sure that 'multiqc.modules.skewer' is explicitly added 2024-05-15T15:29:09,469 to the `packages` configuration field. 2024-05-15T15:29:09,470 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,470 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,470 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,471 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,471 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,472 If you don't want 'multiqc.modules.skewer' to be distributed and are 2024-05-15T15:29:09,473 already explicitly excluding 'multiqc.modules.skewer' via 2024-05-15T15:29:09,473 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,473 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,474 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,474 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,475 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,476 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,477 even if it does not contain any `.py` files. 2024-05-15T15:29:09,477 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,477 directory, all directories are treated like packages. 2024-05-15T15:29:09,478 ******************************************************************************** 2024-05-15T15:29:09,479 !! 2024-05-15T15:29:09,479 check.warn(importable) 2024-05-15T15:29:09,479 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.slamdunk' is absent from the `packages` configuration. 2024-05-15T15:29:09,480 !! 2024-05-15T15:29:09,481 ******************************************************************************** 2024-05-15T15:29:09,482 ############################ 2024-05-15T15:29:09,482 # Package would be ignored # 2024-05-15T15:29:09,483 ############################ 2024-05-15T15:29:09,483 Python recognizes 'multiqc.modules.slamdunk' as an importable package[^1], 2024-05-15T15:29:09,484 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,485 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,485 package, please make sure that 'multiqc.modules.slamdunk' is explicitly added 2024-05-15T15:29:09,486 to the `packages` configuration field. 2024-05-15T15:29:09,486 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,487 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,487 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,488 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,489 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,490 If you don't want 'multiqc.modules.slamdunk' to be distributed and are 2024-05-15T15:29:09,491 already explicitly excluding 'multiqc.modules.slamdunk' via 2024-05-15T15:29:09,491 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,492 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,493 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,494 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,494 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,495 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,496 even if it does not contain any `.py` files. 2024-05-15T15:29:09,496 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,496 directory, all directories are treated like packages. 2024-05-15T15:29:09,497 ******************************************************************************** 2024-05-15T15:29:09,497 !! 2024-05-15T15:29:09,498 check.warn(importable) 2024-05-15T15:29:09,498 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snippy' is absent from the `packages` configuration. 2024-05-15T15:29:09,499 !! 2024-05-15T15:29:09,499 ******************************************************************************** 2024-05-15T15:29:09,500 ############################ 2024-05-15T15:29:09,500 # Package would be ignored # 2024-05-15T15:29:09,501 ############################ 2024-05-15T15:29:09,501 Python recognizes 'multiqc.modules.snippy' as an importable package[^1], 2024-05-15T15:29:09,501 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,502 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,503 package, please make sure that 'multiqc.modules.snippy' is explicitly added 2024-05-15T15:29:09,503 to the `packages` configuration field. 2024-05-15T15:29:09,504 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,504 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,505 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,506 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,507 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,507 If you don't want 'multiqc.modules.snippy' to be distributed and are 2024-05-15T15:29:09,508 already explicitly excluding 'multiqc.modules.snippy' via 2024-05-15T15:29:09,508 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,509 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,509 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,510 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,511 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,512 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,512 even if it does not contain any `.py` files. 2024-05-15T15:29:09,513 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,513 directory, all directories are treated like packages. 2024-05-15T15:29:09,514 ******************************************************************************** 2024-05-15T15:29:09,515 !! 2024-05-15T15:29:09,515 check.warn(importable) 2024-05-15T15:29:09,516 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snpeff' is absent from the `packages` configuration. 2024-05-15T15:29:09,516 !! 2024-05-15T15:29:09,518 ******************************************************************************** 2024-05-15T15:29:09,518 ############################ 2024-05-15T15:29:09,518 # Package would be ignored # 2024-05-15T15:29:09,519 ############################ 2024-05-15T15:29:09,519 Python recognizes 'multiqc.modules.snpeff' as an importable package[^1], 2024-05-15T15:29:09,520 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,521 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,521 package, please make sure that 'multiqc.modules.snpeff' is explicitly added 2024-05-15T15:29:09,521 to the `packages` configuration field. 2024-05-15T15:29:09,522 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,522 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,522 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,523 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,524 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,525 If you don't want 'multiqc.modules.snpeff' to be distributed and are 2024-05-15T15:29:09,525 already explicitly excluding 'multiqc.modules.snpeff' via 2024-05-15T15:29:09,525 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,526 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,526 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,527 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,528 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,529 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,530 even if it does not contain any `.py` files. 2024-05-15T15:29:09,530 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,531 directory, all directories are treated like packages. 2024-05-15T15:29:09,531 ******************************************************************************** 2024-05-15T15:29:09,532 !! 2024-05-15T15:29:09,533 check.warn(importable) 2024-05-15T15:29:09,533 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snpsplit' is absent from the `packages` configuration. 2024-05-15T15:29:09,534 !! 2024-05-15T15:29:09,535 ******************************************************************************** 2024-05-15T15:29:09,535 ############################ 2024-05-15T15:29:09,535 # Package would be ignored # 2024-05-15T15:29:09,536 ############################ 2024-05-15T15:29:09,536 Python recognizes 'multiqc.modules.snpsplit' as an importable package[^1], 2024-05-15T15:29:09,537 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,538 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,538 package, please make sure that 'multiqc.modules.snpsplit' is explicitly added 2024-05-15T15:29:09,539 to the `packages` configuration field. 2024-05-15T15:29:09,540 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,540 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,540 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,541 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,543 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,543 If you don't want 'multiqc.modules.snpsplit' to be distributed and are 2024-05-15T15:29:09,544 already explicitly excluding 'multiqc.modules.snpsplit' via 2024-05-15T15:29:09,544 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,544 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,545 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,545 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,546 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,547 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,547 even if it does not contain any `.py` files. 2024-05-15T15:29:09,547 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,548 directory, all directories are treated like packages. 2024-05-15T15:29:09,548 ******************************************************************************** 2024-05-15T15:29:09,549 !! 2024-05-15T15:29:09,549 check.warn(importable) 2024-05-15T15:29:09,550 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.somalier' is absent from the `packages` configuration. 2024-05-15T15:29:09,550 !! 2024-05-15T15:29:09,551 ******************************************************************************** 2024-05-15T15:29:09,551 ############################ 2024-05-15T15:29:09,552 # Package would be ignored # 2024-05-15T15:29:09,552 ############################ 2024-05-15T15:29:09,552 Python recognizes 'multiqc.modules.somalier' as an importable package[^1], 2024-05-15T15:29:09,553 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,554 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,554 package, please make sure that 'multiqc.modules.somalier' is explicitly added 2024-05-15T15:29:09,555 to the `packages` configuration field. 2024-05-15T15:29:09,556 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,557 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,557 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,558 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,559 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,560 If you don't want 'multiqc.modules.somalier' to be distributed and are 2024-05-15T15:29:09,560 already explicitly excluding 'multiqc.modules.somalier' via 2024-05-15T15:29:09,561 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,561 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,562 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,562 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,563 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,565 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,565 even if it does not contain any `.py` files. 2024-05-15T15:29:09,566 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,566 directory, all directories are treated like packages. 2024-05-15T15:29:09,567 ******************************************************************************** 2024-05-15T15:29:09,568 !! 2024-05-15T15:29:09,568 check.warn(importable) 2024-05-15T15:29:09,568 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sortmerna' is absent from the `packages` configuration. 2024-05-15T15:29:09,569 !! 2024-05-15T15:29:09,569 ******************************************************************************** 2024-05-15T15:29:09,570 ############################ 2024-05-15T15:29:09,570 # Package would be ignored # 2024-05-15T15:29:09,570 ############################ 2024-05-15T15:29:09,571 Python recognizes 'multiqc.modules.sortmerna' as an importable package[^1], 2024-05-15T15:29:09,571 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,572 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,572 package, please make sure that 'multiqc.modules.sortmerna' is explicitly added 2024-05-15T15:29:09,572 to the `packages` configuration field. 2024-05-15T15:29:09,573 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,573 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,574 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,575 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,575 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,576 If you don't want 'multiqc.modules.sortmerna' to be distributed and are 2024-05-15T15:29:09,577 already explicitly excluding 'multiqc.modules.sortmerna' via 2024-05-15T15:29:09,577 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,577 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,578 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,579 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,579 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,581 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,581 even if it does not contain any `.py` files. 2024-05-15T15:29:09,581 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,582 directory, all directories are treated like packages. 2024-05-15T15:29:09,582 ******************************************************************************** 2024-05-15T15:29:09,583 !! 2024-05-15T15:29:09,584 check.warn(importable) 2024-05-15T15:29:09,584 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sourmash' is absent from the `packages` configuration. 2024-05-15T15:29:09,585 !! 2024-05-15T15:29:09,586 ******************************************************************************** 2024-05-15T15:29:09,586 ############################ 2024-05-15T15:29:09,587 # Package would be ignored # 2024-05-15T15:29:09,587 ############################ 2024-05-15T15:29:09,587 Python recognizes 'multiqc.modules.sourmash' as an importable package[^1], 2024-05-15T15:29:09,588 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,589 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,589 package, please make sure that 'multiqc.modules.sourmash' is explicitly added 2024-05-15T15:29:09,589 to the `packages` configuration field. 2024-05-15T15:29:09,591 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,591 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,591 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,592 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,592 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,593 If you don't want 'multiqc.modules.sourmash' to be distributed and are 2024-05-15T15:29:09,593 already explicitly excluding 'multiqc.modules.sourmash' via 2024-05-15T15:29:09,594 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,594 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,594 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,595 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,596 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,597 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,598 even if it does not contain any `.py` files. 2024-05-15T15:29:09,598 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,598 directory, all directories are treated like packages. 2024-05-15T15:29:09,599 ******************************************************************************** 2024-05-15T15:29:09,600 !! 2024-05-15T15:29:09,600 check.warn(importable) 2024-05-15T15:29:09,601 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.spaceranger' is absent from the `packages` configuration. 2024-05-15T15:29:09,601 !! 2024-05-15T15:29:09,602 ******************************************************************************** 2024-05-15T15:29:09,602 ############################ 2024-05-15T15:29:09,603 # Package would be ignored # 2024-05-15T15:29:09,603 ############################ 2024-05-15T15:29:09,604 Python recognizes 'multiqc.modules.spaceranger' as an importable package[^1], 2024-05-15T15:29:09,604 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,605 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,605 package, please make sure that 'multiqc.modules.spaceranger' is explicitly added 2024-05-15T15:29:09,606 to the `packages` configuration field. 2024-05-15T15:29:09,607 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,607 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,608 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,609 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,610 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,610 If you don't want 'multiqc.modules.spaceranger' to be distributed and are 2024-05-15T15:29:09,611 already explicitly excluding 'multiqc.modules.spaceranger' via 2024-05-15T15:29:09,611 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,612 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,612 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,613 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,614 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,615 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,616 even if it does not contain any `.py` files. 2024-05-15T15:29:09,616 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,616 directory, all directories are treated like packages. 2024-05-15T15:29:09,616 ******************************************************************************** 2024-05-15T15:29:09,617 !! 2024-05-15T15:29:09,618 check.warn(importable) 2024-05-15T15:29:09,618 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.stacks' is absent from the `packages` configuration. 2024-05-15T15:29:09,618 !! 2024-05-15T15:29:09,619 ******************************************************************************** 2024-05-15T15:29:09,619 ############################ 2024-05-15T15:29:09,620 # Package would be ignored # 2024-05-15T15:29:09,620 ############################ 2024-05-15T15:29:09,620 Python recognizes 'multiqc.modules.stacks' as an importable package[^1], 2024-05-15T15:29:09,621 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,621 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,622 package, please make sure that 'multiqc.modules.stacks' is explicitly added 2024-05-15T15:29:09,622 to the `packages` configuration field. 2024-05-15T15:29:09,623 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,623 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,624 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,625 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,626 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,626 If you don't want 'multiqc.modules.stacks' to be distributed and are 2024-05-15T15:29:09,627 already explicitly excluding 'multiqc.modules.stacks' via 2024-05-15T15:29:09,627 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,628 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,628 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,629 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,630 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,631 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,632 even if it does not contain any `.py` files. 2024-05-15T15:29:09,632 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,633 directory, all directories are treated like packages. 2024-05-15T15:29:09,633 ******************************************************************************** 2024-05-15T15:29:09,634 !! 2024-05-15T15:29:09,634 check.warn(importable) 2024-05-15T15:29:09,635 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.star' is absent from the `packages` configuration. 2024-05-15T15:29:09,635 !! 2024-05-15T15:29:09,637 ******************************************************************************** 2024-05-15T15:29:09,637 ############################ 2024-05-15T15:29:09,638 # Package would be ignored # 2024-05-15T15:29:09,638 ############################ 2024-05-15T15:29:09,639 Python recognizes 'multiqc.modules.star' as an importable package[^1], 2024-05-15T15:29:09,639 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,640 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,641 package, please make sure that 'multiqc.modules.star' is explicitly added 2024-05-15T15:29:09,641 to the `packages` configuration field. 2024-05-15T15:29:09,642 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,642 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,642 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,643 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,644 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,645 If you don't want 'multiqc.modules.star' to be distributed and are 2024-05-15T15:29:09,645 already explicitly excluding 'multiqc.modules.star' via 2024-05-15T15:29:09,645 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,646 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,646 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,647 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,647 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,649 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,649 even if it does not contain any `.py` files. 2024-05-15T15:29:09,650 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,650 directory, all directories are treated like packages. 2024-05-15T15:29:09,651 ******************************************************************************** 2024-05-15T15:29:09,652 !! 2024-05-15T15:29:09,653 check.warn(importable) 2024-05-15T15:29:09,653 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.supernova' is absent from the `packages` configuration. 2024-05-15T15:29:09,654 !! 2024-05-15T15:29:09,655 ******************************************************************************** 2024-05-15T15:29:09,655 ############################ 2024-05-15T15:29:09,656 # Package would be ignored # 2024-05-15T15:29:09,656 ############################ 2024-05-15T15:29:09,657 Python recognizes 'multiqc.modules.supernova' as an importable package[^1], 2024-05-15T15:29:09,657 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,658 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,658 package, please make sure that 'multiqc.modules.supernova' is explicitly added 2024-05-15T15:29:09,659 to the `packages` configuration field. 2024-05-15T15:29:09,660 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,660 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,661 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,662 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,663 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,663 If you don't want 'multiqc.modules.supernova' to be distributed and are 2024-05-15T15:29:09,664 already explicitly excluding 'multiqc.modules.supernova' via 2024-05-15T15:29:09,665 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,665 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,666 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,666 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,667 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,668 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,668 even if it does not contain any `.py` files. 2024-05-15T15:29:09,669 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,669 directory, all directories are treated like packages. 2024-05-15T15:29:09,669 ******************************************************************************** 2024-05-15T15:29:09,670 !! 2024-05-15T15:29:09,670 check.warn(importable) 2024-05-15T15:29:09,670 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.theta2' is absent from the `packages` configuration. 2024-05-15T15:29:09,671 !! 2024-05-15T15:29:09,671 ******************************************************************************** 2024-05-15T15:29:09,672 ############################ 2024-05-15T15:29:09,672 # Package would be ignored # 2024-05-15T15:29:09,673 ############################ 2024-05-15T15:29:09,673 Python recognizes 'multiqc.modules.theta2' as an importable package[^1], 2024-05-15T15:29:09,673 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,674 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,675 package, please make sure that 'multiqc.modules.theta2' is explicitly added 2024-05-15T15:29:09,675 to the `packages` configuration field. 2024-05-15T15:29:09,676 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,677 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,677 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,678 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,679 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,681 If you don't want 'multiqc.modules.theta2' to be distributed and are 2024-05-15T15:29:09,681 already explicitly excluding 'multiqc.modules.theta2' via 2024-05-15T15:29:09,682 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,682 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,683 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,683 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,685 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,686 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,687 even if it does not contain any `.py` files. 2024-05-15T15:29:09,687 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,688 directory, all directories are treated like packages. 2024-05-15T15:29:09,688 ******************************************************************************** 2024-05-15T15:29:09,689 !! 2024-05-15T15:29:09,689 check.warn(importable) 2024-05-15T15:29:09,690 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.tophat' is absent from the `packages` configuration. 2024-05-15T15:29:09,690 !! 2024-05-15T15:29:09,691 ******************************************************************************** 2024-05-15T15:29:09,692 ############################ 2024-05-15T15:29:09,692 # Package would be ignored # 2024-05-15T15:29:09,693 ############################ 2024-05-15T15:29:09,693 Python recognizes 'multiqc.modules.tophat' as an importable package[^1], 2024-05-15T15:29:09,693 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,694 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,694 package, please make sure that 'multiqc.modules.tophat' is explicitly added 2024-05-15T15:29:09,695 to the `packages` configuration field. 2024-05-15T15:29:09,696 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,696 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,696 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,697 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,698 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,699 If you don't want 'multiqc.modules.tophat' to be distributed and are 2024-05-15T15:29:09,699 already explicitly excluding 'multiqc.modules.tophat' via 2024-05-15T15:29:09,700 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,700 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,701 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,702 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,703 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,705 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,706 even if it does not contain any `.py` files. 2024-05-15T15:29:09,706 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,707 directory, all directories are treated like packages. 2024-05-15T15:29:09,708 ******************************************************************************** 2024-05-15T15:29:09,709 !! 2024-05-15T15:29:09,709 check.warn(importable) 2024-05-15T15:29:09,710 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.trimmomatic' is absent from the `packages` configuration. 2024-05-15T15:29:09,711 !! 2024-05-15T15:29:09,712 ******************************************************************************** 2024-05-15T15:29:09,712 ############################ 2024-05-15T15:29:09,713 # Package would be ignored # 2024-05-15T15:29:09,713 ############################ 2024-05-15T15:29:09,714 Python recognizes 'multiqc.modules.trimmomatic' as an importable package[^1], 2024-05-15T15:29:09,715 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,716 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,717 package, please make sure that 'multiqc.modules.trimmomatic' is explicitly added 2024-05-15T15:29:09,717 to the `packages` configuration field. 2024-05-15T15:29:09,719 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,719 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,720 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,722 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,723 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,724 If you don't want 'multiqc.modules.trimmomatic' to be distributed and are 2024-05-15T15:29:09,725 already explicitly excluding 'multiqc.modules.trimmomatic' via 2024-05-15T15:29:09,725 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,726 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,726 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,727 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,731 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,733 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,733 even if it does not contain any `.py` files. 2024-05-15T15:29:09,734 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,734 directory, all directories are treated like packages. 2024-05-15T15:29:09,735 ******************************************************************************** 2024-05-15T15:29:09,736 !! 2024-05-15T15:29:09,736 check.warn(importable) 2024-05-15T15:29:09,737 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.truvari' is absent from the `packages` configuration. 2024-05-15T15:29:09,737 !! 2024-05-15T15:29:09,738 ******************************************************************************** 2024-05-15T15:29:09,739 ############################ 2024-05-15T15:29:09,739 # Package would be ignored # 2024-05-15T15:29:09,740 ############################ 2024-05-15T15:29:09,741 Python recognizes 'multiqc.modules.truvari' as an importable package[^1], 2024-05-15T15:29:09,741 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,742 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,743 package, please make sure that 'multiqc.modules.truvari' is explicitly added 2024-05-15T15:29:09,743 to the `packages` configuration field. 2024-05-15T15:29:09,745 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,745 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,746 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,747 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,748 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,749 If you don't want 'multiqc.modules.truvari' to be distributed and are 2024-05-15T15:29:09,750 already explicitly excluding 'multiqc.modules.truvari' via 2024-05-15T15:29:09,750 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,751 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,751 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,753 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,754 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,755 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,756 even if it does not contain any `.py` files. 2024-05-15T15:29:09,757 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,758 directory, all directories are treated like packages. 2024-05-15T15:29:09,758 ******************************************************************************** 2024-05-15T15:29:09,759 !! 2024-05-15T15:29:09,760 check.warn(importable) 2024-05-15T15:29:09,760 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.umitools' is absent from the `packages` configuration. 2024-05-15T15:29:09,761 !! 2024-05-15T15:29:09,762 ******************************************************************************** 2024-05-15T15:29:09,762 ############################ 2024-05-15T15:29:09,763 # Package would be ignored # 2024-05-15T15:29:09,763 ############################ 2024-05-15T15:29:09,764 Python recognizes 'multiqc.modules.umitools' as an importable package[^1], 2024-05-15T15:29:09,764 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,765 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,766 package, please make sure that 'multiqc.modules.umitools' is explicitly added 2024-05-15T15:29:09,767 to the `packages` configuration field. 2024-05-15T15:29:09,768 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,768 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,769 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,770 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,771 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,772 If you don't want 'multiqc.modules.umitools' to be distributed and are 2024-05-15T15:29:09,772 already explicitly excluding 'multiqc.modules.umitools' via 2024-05-15T15:29:09,773 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,774 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,774 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,775 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,776 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,778 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,778 even if it does not contain any `.py` files. 2024-05-15T15:29:09,779 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,779 directory, all directories are treated like packages. 2024-05-15T15:29:09,780 ******************************************************************************** 2024-05-15T15:29:09,781 !! 2024-05-15T15:29:09,781 check.warn(importable) 2024-05-15T15:29:09,782 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.varscan2' is absent from the `packages` configuration. 2024-05-15T15:29:09,782 !! 2024-05-15T15:29:09,783 ******************************************************************************** 2024-05-15T15:29:09,784 ############################ 2024-05-15T15:29:09,785 # Package would be ignored # 2024-05-15T15:29:09,785 ############################ 2024-05-15T15:29:09,786 Python recognizes 'multiqc.modules.varscan2' as an importable package[^1], 2024-05-15T15:29:09,786 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,788 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,788 package, please make sure that 'multiqc.modules.varscan2' is explicitly added 2024-05-15T15:29:09,789 to the `packages` configuration field. 2024-05-15T15:29:09,790 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,790 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,791 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,792 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,794 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,795 If you don't want 'multiqc.modules.varscan2' to be distributed and are 2024-05-15T15:29:09,795 already explicitly excluding 'multiqc.modules.varscan2' via 2024-05-15T15:29:09,796 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,796 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,797 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,798 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,799 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,800 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,801 even if it does not contain any `.py` files. 2024-05-15T15:29:09,801 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,802 directory, all directories are treated like packages. 2024-05-15T15:29:09,802 ******************************************************************************** 2024-05-15T15:29:09,803 !! 2024-05-15T15:29:09,804 check.warn(importable) 2024-05-15T15:29:09,805 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.vcftools' is absent from the `packages` configuration. 2024-05-15T15:29:09,805 !! 2024-05-15T15:29:09,807 ******************************************************************************** 2024-05-15T15:29:09,807 ############################ 2024-05-15T15:29:09,808 # Package would be ignored # 2024-05-15T15:29:09,809 ############################ 2024-05-15T15:29:09,809 Python recognizes 'multiqc.modules.vcftools' as an importable package[^1], 2024-05-15T15:29:09,810 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,811 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,812 package, please make sure that 'multiqc.modules.vcftools' is explicitly added 2024-05-15T15:29:09,812 to the `packages` configuration field. 2024-05-15T15:29:09,814 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,814 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,815 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,816 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,817 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,818 If you don't want 'multiqc.modules.vcftools' to be distributed and are 2024-05-15T15:29:09,819 already explicitly excluding 'multiqc.modules.vcftools' via 2024-05-15T15:29:09,819 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,820 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,821 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,825 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,826 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,828 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,828 even if it does not contain any `.py` files. 2024-05-15T15:29:09,829 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,829 directory, all directories are treated like packages. 2024-05-15T15:29:09,830 ******************************************************************************** 2024-05-15T15:29:09,830 !! 2024-05-15T15:29:09,831 check.warn(importable) 2024-05-15T15:29:09,831 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.vep' is absent from the `packages` configuration. 2024-05-15T15:29:09,832 !! 2024-05-15T15:29:09,833 ******************************************************************************** 2024-05-15T15:29:09,833 ############################ 2024-05-15T15:29:09,834 # Package would be ignored # 2024-05-15T15:29:09,834 ############################ 2024-05-15T15:29:09,835 Python recognizes 'multiqc.modules.vep' as an importable package[^1], 2024-05-15T15:29:09,835 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,836 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,837 package, please make sure that 'multiqc.modules.vep' is explicitly added 2024-05-15T15:29:09,837 to the `packages` configuration field. 2024-05-15T15:29:09,838 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,839 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,839 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,841 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,842 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,843 If you don't want 'multiqc.modules.vep' to be distributed and are 2024-05-15T15:29:09,843 already explicitly excluding 'multiqc.modules.vep' via 2024-05-15T15:29:09,844 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,845 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,845 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,846 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,848 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,849 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,850 even if it does not contain any `.py` files. 2024-05-15T15:29:09,850 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,851 directory, all directories are treated like packages. 2024-05-15T15:29:09,852 ******************************************************************************** 2024-05-15T15:29:09,853 !! 2024-05-15T15:29:09,853 check.warn(importable) 2024-05-15T15:29:09,854 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.verifybamid' is absent from the `packages` configuration. 2024-05-15T15:29:09,855 !! 2024-05-15T15:29:09,856 ******************************************************************************** 2024-05-15T15:29:09,857 ############################ 2024-05-15T15:29:09,858 # Package would be ignored # 2024-05-15T15:29:09,858 ############################ 2024-05-15T15:29:09,859 Python recognizes 'multiqc.modules.verifybamid' as an importable package[^1], 2024-05-15T15:29:09,859 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,860 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,860 package, please make sure that 'multiqc.modules.verifybamid' is explicitly added 2024-05-15T15:29:09,861 to the `packages` configuration field. 2024-05-15T15:29:09,862 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,862 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,863 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,864 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,865 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,866 If you don't want 'multiqc.modules.verifybamid' to be distributed and are 2024-05-15T15:29:09,866 already explicitly excluding 'multiqc.modules.verifybamid' via 2024-05-15T15:29:09,867 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,867 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,868 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,869 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,870 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,871 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,872 even if it does not contain any `.py` files. 2024-05-15T15:29:09,872 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,873 directory, all directories are treated like packages. 2024-05-15T15:29:09,873 ******************************************************************************** 2024-05-15T15:29:09,874 !! 2024-05-15T15:29:09,875 check.warn(importable) 2024-05-15T15:29:09,876 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.whatshap' is absent from the `packages` configuration. 2024-05-15T15:29:09,876 !! 2024-05-15T15:29:09,878 ******************************************************************************** 2024-05-15T15:29:09,878 ############################ 2024-05-15T15:29:09,879 # Package would be ignored # 2024-05-15T15:29:09,879 ############################ 2024-05-15T15:29:09,880 Python recognizes 'multiqc.modules.whatshap' as an importable package[^1], 2024-05-15T15:29:09,881 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,882 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,882 package, please make sure that 'multiqc.modules.whatshap' is explicitly added 2024-05-15T15:29:09,883 to the `packages` configuration field. 2024-05-15T15:29:09,884 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,885 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,885 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,887 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,888 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,890 If you don't want 'multiqc.modules.whatshap' to be distributed and are 2024-05-15T15:29:09,890 already explicitly excluding 'multiqc.modules.whatshap' via 2024-05-15T15:29:09,890 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,891 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,891 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,892 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,893 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,894 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,895 even if it does not contain any `.py` files. 2024-05-15T15:29:09,895 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,896 directory, all directories are treated like packages. 2024-05-15T15:29:09,896 ******************************************************************************** 2024-05-15T15:29:09,897 !! 2024-05-15T15:29:09,898 check.warn(importable) 2024-05-15T15:29:09,898 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.xengsort' is absent from the `packages` configuration. 2024-05-15T15:29:09,899 !! 2024-05-15T15:29:09,899 ******************************************************************************** 2024-05-15T15:29:09,900 ############################ 2024-05-15T15:29:09,900 # Package would be ignored # 2024-05-15T15:29:09,901 ############################ 2024-05-15T15:29:09,901 Python recognizes 'multiqc.modules.xengsort' as an importable package[^1], 2024-05-15T15:29:09,901 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,902 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,903 package, please make sure that 'multiqc.modules.xengsort' is explicitly added 2024-05-15T15:29:09,903 to the `packages` configuration field. 2024-05-15T15:29:09,904 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,904 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,905 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,905 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,906 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,907 If you don't want 'multiqc.modules.xengsort' to be distributed and are 2024-05-15T15:29:09,907 already explicitly excluding 'multiqc.modules.xengsort' via 2024-05-15T15:29:09,909 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,910 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,911 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,912 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,913 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,914 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,914 even if it does not contain any `.py` files. 2024-05-15T15:29:09,915 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,915 directory, all directories are treated like packages. 2024-05-15T15:29:09,916 ******************************************************************************** 2024-05-15T15:29:09,917 !! 2024-05-15T15:29:09,917 check.warn(importable) 2024-05-15T15:29:09,918 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.xenome' is absent from the `packages` configuration. 2024-05-15T15:29:09,918 !! 2024-05-15T15:29:09,919 ******************************************************************************** 2024-05-15T15:29:09,919 ############################ 2024-05-15T15:29:09,920 # Package would be ignored # 2024-05-15T15:29:09,920 ############################ 2024-05-15T15:29:09,921 Python recognizes 'multiqc.modules.xenome' as an importable package[^1], 2024-05-15T15:29:09,921 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,922 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,922 package, please make sure that 'multiqc.modules.xenome' is explicitly added 2024-05-15T15:29:09,922 to the `packages` configuration field. 2024-05-15T15:29:09,923 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,924 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,924 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,925 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,926 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,927 If you don't want 'multiqc.modules.xenome' to be distributed and are 2024-05-15T15:29:09,927 already explicitly excluding 'multiqc.modules.xenome' via 2024-05-15T15:29:09,927 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,928 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,928 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,929 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,930 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,931 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,932 even if it does not contain any `.py` files. 2024-05-15T15:29:09,932 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,933 directory, all directories are treated like packages. 2024-05-15T15:29:09,933 ******************************************************************************** 2024-05-15T15:29:09,934 !! 2024-05-15T15:29:09,935 check.warn(importable) 2024-05-15T15:29:09,935 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.plots' is absent from the `packages` configuration. 2024-05-15T15:29:09,936 !! 2024-05-15T15:29:09,937 ******************************************************************************** 2024-05-15T15:29:09,937 ############################ 2024-05-15T15:29:09,937 # Package would be ignored # 2024-05-15T15:29:09,938 ############################ 2024-05-15T15:29:09,938 Python recognizes 'multiqc.plots' as an importable package[^1], 2024-05-15T15:29:09,939 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,940 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,940 package, please make sure that 'multiqc.plots' is explicitly added 2024-05-15T15:29:09,941 to the `packages` configuration field. 2024-05-15T15:29:09,942 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,942 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,943 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,944 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,945 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,945 If you don't want 'multiqc.plots' to be distributed and are 2024-05-15T15:29:09,946 already explicitly excluding 'multiqc.plots' via 2024-05-15T15:29:09,946 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,946 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,947 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,948 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,949 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,951 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,951 even if it does not contain any `.py` files. 2024-05-15T15:29:09,952 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,952 directory, all directories are treated like packages. 2024-05-15T15:29:09,953 ******************************************************************************** 2024-05-15T15:29:09,954 !! 2024-05-15T15:29:09,954 check.warn(importable) 2024-05-15T15:29:09,955 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.plots.plotly' is absent from the `packages` configuration. 2024-05-15T15:29:09,955 !! 2024-05-15T15:29:09,957 ******************************************************************************** 2024-05-15T15:29:09,957 ############################ 2024-05-15T15:29:09,958 # Package would be ignored # 2024-05-15T15:29:09,958 ############################ 2024-05-15T15:29:09,959 Python recognizes 'multiqc.plots.plotly' as an importable package[^1], 2024-05-15T15:29:09,959 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,961 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,961 package, please make sure that 'multiqc.plots.plotly' is explicitly added 2024-05-15T15:29:09,962 to the `packages` configuration field. 2024-05-15T15:29:09,963 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,963 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,964 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,965 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,966 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,967 If you don't want 'multiqc.plots.plotly' to be distributed and are 2024-05-15T15:29:09,968 already explicitly excluding 'multiqc.plots.plotly' via 2024-05-15T15:29:09,968 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,969 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,969 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,970 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,971 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,973 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,973 even if it does not contain any `.py` files. 2024-05-15T15:29:09,974 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,974 directory, all directories are treated like packages. 2024-05-15T15:29:09,975 ******************************************************************************** 2024-05-15T15:29:09,976 !! 2024-05-15T15:29:09,977 check.warn(importable) 2024-05-15T15:29:09,977 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates' is absent from the `packages` configuration. 2024-05-15T15:29:09,977 !! 2024-05-15T15:29:09,978 ******************************************************************************** 2024-05-15T15:29:09,979 ############################ 2024-05-15T15:29:09,979 # Package would be ignored # 2024-05-15T15:29:09,979 ############################ 2024-05-15T15:29:09,980 Python recognizes 'multiqc.templates' as an importable package[^1], 2024-05-15T15:29:09,980 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:09,981 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:09,982 package, please make sure that 'multiqc.templates' is explicitly added 2024-05-15T15:29:09,982 to the `packages` configuration field. 2024-05-15T15:29:09,983 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:09,983 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:09,984 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:09,985 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:09,986 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:09,987 If you don't want 'multiqc.templates' to be distributed and are 2024-05-15T15:29:09,987 already explicitly excluding 'multiqc.templates' via 2024-05-15T15:29:09,988 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:09,989 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:09,989 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:09,990 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:09,991 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:09,993 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:09,993 even if it does not contain any `.py` files. 2024-05-15T15:29:09,994 On the other hand, currently there is no concept of package data 2024-05-15T15:29:09,994 directory, all directories are treated like packages. 2024-05-15T15:29:09,995 ******************************************************************************** 2024-05-15T15:29:09,995 !! 2024-05-15T15:29:09,996 check.warn(importable) 2024-05-15T15:29:09,997 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default' is absent from the `packages` configuration. 2024-05-15T15:29:09,997 !! 2024-05-15T15:29:09,998 ******************************************************************************** 2024-05-15T15:29:09,999 ############################ 2024-05-15T15:29:09,999 # Package would be ignored # 2024-05-15T15:29:09,999 ############################ 2024-05-15T15:29:10,000 Python recognizes 'multiqc.templates.default' as an importable package[^1], 2024-05-15T15:29:10,001 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,002 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,002 package, please make sure that 'multiqc.templates.default' is explicitly added 2024-05-15T15:29:10,003 to the `packages` configuration field. 2024-05-15T15:29:10,003 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,004 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,005 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,006 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,007 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,007 If you don't want 'multiqc.templates.default' to be distributed and are 2024-05-15T15:29:10,008 already explicitly excluding 'multiqc.templates.default' via 2024-05-15T15:29:10,009 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,009 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,010 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,011 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,012 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,013 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,013 even if it does not contain any `.py` files. 2024-05-15T15:29:10,014 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,014 directory, all directories are treated like packages. 2024-05-15T15:29:10,015 ******************************************************************************** 2024-05-15T15:29:10,016 !! 2024-05-15T15:29:10,017 check.warn(importable) 2024-05-15T15:29:10,017 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.css' is absent from the `packages` configuration. 2024-05-15T15:29:10,018 !! 2024-05-15T15:29:10,019 ******************************************************************************** 2024-05-15T15:29:10,019 ############################ 2024-05-15T15:29:10,019 # Package would be ignored # 2024-05-15T15:29:10,020 ############################ 2024-05-15T15:29:10,021 Python recognizes 'multiqc.templates.default.assets.css' as an importable package[^1], 2024-05-15T15:29:10,021 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,022 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,022 package, please make sure that 'multiqc.templates.default.assets.css' is explicitly added 2024-05-15T15:29:10,023 to the `packages` configuration field. 2024-05-15T15:29:10,024 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,025 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,026 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,027 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,029 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,030 If you don't want 'multiqc.templates.default.assets.css' to be distributed and are 2024-05-15T15:29:10,031 already explicitly excluding 'multiqc.templates.default.assets.css' via 2024-05-15T15:29:10,032 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,033 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,033 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,035 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,036 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,038 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,038 even if it does not contain any `.py` files. 2024-05-15T15:29:10,039 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,039 directory, all directories are treated like packages. 2024-05-15T15:29:10,040 ******************************************************************************** 2024-05-15T15:29:10,041 !! 2024-05-15T15:29:10,041 check.warn(importable) 2024-05-15T15:29:10,042 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.fonts' is absent from the `packages` configuration. 2024-05-15T15:29:10,042 !! 2024-05-15T15:29:10,043 ******************************************************************************** 2024-05-15T15:29:10,044 ############################ 2024-05-15T15:29:10,045 # Package would be ignored # 2024-05-15T15:29:10,045 ############################ 2024-05-15T15:29:10,046 Python recognizes 'multiqc.templates.default.assets.fonts' as an importable package[^1], 2024-05-15T15:29:10,046 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,047 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,048 package, please make sure that 'multiqc.templates.default.assets.fonts' is explicitly added 2024-05-15T15:29:10,048 to the `packages` configuration field. 2024-05-15T15:29:10,050 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,050 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,051 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,052 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,053 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,054 If you don't want 'multiqc.templates.default.assets.fonts' to be distributed and are 2024-05-15T15:29:10,054 already explicitly excluding 'multiqc.templates.default.assets.fonts' via 2024-05-15T15:29:10,055 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,055 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,056 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,057 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,058 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,059 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,060 even if it does not contain any `.py` files. 2024-05-15T15:29:10,061 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,061 directory, all directories are treated like packages. 2024-05-15T15:29:10,062 ******************************************************************************** 2024-05-15T15:29:10,063 !! 2024-05-15T15:29:10,063 check.warn(importable) 2024-05-15T15:29:10,064 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.img' is absent from the `packages` configuration. 2024-05-15T15:29:10,064 !! 2024-05-15T15:29:10,065 ******************************************************************************** 2024-05-15T15:29:10,066 ############################ 2024-05-15T15:29:10,066 # Package would be ignored # 2024-05-15T15:29:10,067 ############################ 2024-05-15T15:29:10,067 Python recognizes 'multiqc.templates.default.assets.img' as an importable package[^1], 2024-05-15T15:29:10,068 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,069 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,069 package, please make sure that 'multiqc.templates.default.assets.img' is explicitly added 2024-05-15T15:29:10,070 to the `packages` configuration field. 2024-05-15T15:29:10,071 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,071 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,071 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,072 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,073 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,074 If you don't want 'multiqc.templates.default.assets.img' to be distributed and are 2024-05-15T15:29:10,075 already explicitly excluding 'multiqc.templates.default.assets.img' via 2024-05-15T15:29:10,075 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,075 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,076 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,077 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,078 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,079 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,080 even if it does not contain any `.py` files. 2024-05-15T15:29:10,081 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,081 directory, all directories are treated like packages. 2024-05-15T15:29:10,082 ******************************************************************************** 2024-05-15T15:29:10,083 !! 2024-05-15T15:29:10,083 check.warn(importable) 2024-05-15T15:29:10,084 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js' is absent from the `packages` configuration. 2024-05-15T15:29:10,084 !! 2024-05-15T15:29:10,086 ******************************************************************************** 2024-05-15T15:29:10,086 ############################ 2024-05-15T15:29:10,087 # Package would be ignored # 2024-05-15T15:29:10,087 ############################ 2024-05-15T15:29:10,088 Python recognizes 'multiqc.templates.default.assets.js' as an importable package[^1], 2024-05-15T15:29:10,089 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,090 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,090 package, please make sure that 'multiqc.templates.default.assets.js' is explicitly added 2024-05-15T15:29:10,091 to the `packages` configuration field. 2024-05-15T15:29:10,093 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,093 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,094 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,095 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,096 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,097 If you don't want 'multiqc.templates.default.assets.js' to be distributed and are 2024-05-15T15:29:10,097 already explicitly excluding 'multiqc.templates.default.assets.js' via 2024-05-15T15:29:10,097 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,098 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,098 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,100 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,101 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,102 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,102 even if it does not contain any `.py` files. 2024-05-15T15:29:10,103 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,103 directory, all directories are treated like packages. 2024-05-15T15:29:10,104 ******************************************************************************** 2024-05-15T15:29:10,105 !! 2024-05-15T15:29:10,105 check.warn(importable) 2024-05-15T15:29:10,106 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js.packages' is absent from the `packages` configuration. 2024-05-15T15:29:10,106 !! 2024-05-15T15:29:10,107 ******************************************************************************** 2024-05-15T15:29:10,108 ############################ 2024-05-15T15:29:10,108 # Package would be ignored # 2024-05-15T15:29:10,111 ############################ 2024-05-15T15:29:10,111 Python recognizes 'multiqc.templates.default.assets.js.packages' as an importable package[^1], 2024-05-15T15:29:10,112 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,113 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,113 package, please make sure that 'multiqc.templates.default.assets.js.packages' is explicitly added 2024-05-15T15:29:10,114 to the `packages` configuration field. 2024-05-15T15:29:10,115 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,115 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,116 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,117 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,118 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,119 If you don't want 'multiqc.templates.default.assets.js.packages' to be distributed and are 2024-05-15T15:29:10,120 already explicitly excluding 'multiqc.templates.default.assets.js.packages' via 2024-05-15T15:29:10,120 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,121 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,122 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,123 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,125 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,126 even if it does not contain any `.py` files. 2024-05-15T15:29:10,126 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,127 directory, all directories are treated like packages. 2024-05-15T15:29:10,127 ******************************************************************************** 2024-05-15T15:29:10,129 !! 2024-05-15T15:29:10,129 check.warn(importable) 2024-05-15T15:29:10,130 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js.plots' is absent from the `packages` configuration. 2024-05-15T15:29:10,130 !! 2024-05-15T15:29:10,131 ******************************************************************************** 2024-05-15T15:29:10,132 ############################ 2024-05-15T15:29:10,132 # Package would be ignored # 2024-05-15T15:29:10,133 ############################ 2024-05-15T15:29:10,133 Python recognizes 'multiqc.templates.default.assets.js.plots' as an importable package[^1], 2024-05-15T15:29:10,134 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,135 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,135 package, please make sure that 'multiqc.templates.default.assets.js.plots' is explicitly added 2024-05-15T15:29:10,136 to the `packages` configuration field. 2024-05-15T15:29:10,137 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,138 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,139 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,140 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,141 If you don't want 'multiqc.templates.default.assets.js.plots' to be distributed and are 2024-05-15T15:29:10,142 already explicitly excluding 'multiqc.templates.default.assets.js.plots' via 2024-05-15T15:29:10,143 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,143 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,144 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,145 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,146 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,147 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,148 even if it does not contain any `.py` files. 2024-05-15T15:29:10,149 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,149 directory, all directories are treated like packages. 2024-05-15T15:29:10,150 ******************************************************************************** 2024-05-15T15:29:10,151 !! 2024-05-15T15:29:10,151 check.warn(importable) 2024-05-15T15:29:10,152 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.gathered' is absent from the `packages` configuration. 2024-05-15T15:29:10,152 !! 2024-05-15T15:29:10,153 ******************************************************************************** 2024-05-15T15:29:10,154 ############################ 2024-05-15T15:29:10,155 # Package would be ignored # 2024-05-15T15:29:10,155 ############################ 2024-05-15T15:29:10,156 Python recognizes 'multiqc.templates.gathered' as an importable package[^1], 2024-05-15T15:29:10,156 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,157 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,158 package, please make sure that 'multiqc.templates.gathered' is explicitly added 2024-05-15T15:29:10,158 to the `packages` configuration field. 2024-05-15T15:29:10,160 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,160 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,161 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,161 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,162 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,163 If you don't want 'multiqc.templates.gathered' to be distributed and are 2024-05-15T15:29:10,164 already explicitly excluding 'multiqc.templates.gathered' via 2024-05-15T15:29:10,164 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,165 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,165 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,167 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,168 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,169 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,170 even if it does not contain any `.py` files. 2024-05-15T15:29:10,170 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,171 directory, all directories are treated like packages. 2024-05-15T15:29:10,171 ******************************************************************************** 2024-05-15T15:29:10,173 !! 2024-05-15T15:29:10,173 check.warn(importable) 2024-05-15T15:29:10,174 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo' is absent from the `packages` configuration. 2024-05-15T15:29:10,174 !! 2024-05-15T15:29:10,176 ******************************************************************************** 2024-05-15T15:29:10,176 ############################ 2024-05-15T15:29:10,177 # Package would be ignored # 2024-05-15T15:29:10,177 ############################ 2024-05-15T15:29:10,178 Python recognizes 'multiqc.templates.geo' as an importable package[^1], 2024-05-15T15:29:10,178 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,180 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,181 package, please make sure that 'multiqc.templates.geo' is explicitly added 2024-05-15T15:29:10,181 to the `packages` configuration field. 2024-05-15T15:29:10,182 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,183 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,183 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,184 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,185 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,186 If you don't want 'multiqc.templates.geo' to be distributed and are 2024-05-15T15:29:10,187 already explicitly excluding 'multiqc.templates.geo' via 2024-05-15T15:29:10,188 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,188 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,189 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,190 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,191 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,192 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,193 even if it does not contain any `.py` files. 2024-05-15T15:29:10,193 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,194 directory, all directories are treated like packages. 2024-05-15T15:29:10,194 ******************************************************************************** 2024-05-15T15:29:10,195 !! 2024-05-15T15:29:10,195 check.warn(importable) 2024-05-15T15:29:10,196 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo.assets.css' is absent from the `packages` configuration. 2024-05-15T15:29:10,196 !! 2024-05-15T15:29:10,197 ******************************************************************************** 2024-05-15T15:29:10,198 ############################ 2024-05-15T15:29:10,198 # Package would be ignored # 2024-05-15T15:29:10,199 ############################ 2024-05-15T15:29:10,199 Python recognizes 'multiqc.templates.geo.assets.css' as an importable package[^1], 2024-05-15T15:29:10,200 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,201 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,201 package, please make sure that 'multiqc.templates.geo.assets.css' is explicitly added 2024-05-15T15:29:10,202 to the `packages` configuration field. 2024-05-15T15:29:10,203 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,203 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,204 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,205 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,206 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,207 If you don't want 'multiqc.templates.geo.assets.css' to be distributed and are 2024-05-15T15:29:10,207 already explicitly excluding 'multiqc.templates.geo.assets.css' via 2024-05-15T15:29:10,208 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,208 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,209 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,210 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,211 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,213 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,213 even if it does not contain any `.py` files. 2024-05-15T15:29:10,214 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,215 directory, all directories are treated like packages. 2024-05-15T15:29:10,215 ******************************************************************************** 2024-05-15T15:29:10,216 !! 2024-05-15T15:29:10,217 check.warn(importable) 2024-05-15T15:29:10,217 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo.assets.img' is absent from the `packages` configuration. 2024-05-15T15:29:10,218 !! 2024-05-15T15:29:10,220 ******************************************************************************** 2024-05-15T15:29:10,220 ############################ 2024-05-15T15:29:10,221 # Package would be ignored # 2024-05-15T15:29:10,221 ############################ 2024-05-15T15:29:10,222 Python recognizes 'multiqc.templates.geo.assets.img' as an importable package[^1], 2024-05-15T15:29:10,222 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,223 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,224 package, please make sure that 'multiqc.templates.geo.assets.img' is explicitly added 2024-05-15T15:29:10,225 to the `packages` configuration field. 2024-05-15T15:29:10,225 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,226 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,226 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,227 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,228 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,229 If you don't want 'multiqc.templates.geo.assets.img' to be distributed and are 2024-05-15T15:29:10,230 already explicitly excluding 'multiqc.templates.geo.assets.img' via 2024-05-15T15:29:10,230 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,231 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,231 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,233 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,234 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,235 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,236 even if it does not contain any `.py` files. 2024-05-15T15:29:10,237 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,237 directory, all directories are treated like packages. 2024-05-15T15:29:10,238 ******************************************************************************** 2024-05-15T15:29:10,239 !! 2024-05-15T15:29:10,239 check.warn(importable) 2024-05-15T15:29:10,240 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.sections' is absent from the `packages` configuration. 2024-05-15T15:29:10,240 !! 2024-05-15T15:29:10,241 ******************************************************************************** 2024-05-15T15:29:10,242 ############################ 2024-05-15T15:29:10,243 # Package would be ignored # 2024-05-15T15:29:10,243 ############################ 2024-05-15T15:29:10,244 Python recognizes 'multiqc.templates.sections' as an importable package[^1], 2024-05-15T15:29:10,244 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,245 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,246 package, please make sure that 'multiqc.templates.sections' is explicitly added 2024-05-15T15:29:10,246 to the `packages` configuration field. 2024-05-15T15:29:10,247 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,248 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,249 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,250 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,250 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,251 If you don't want 'multiqc.templates.sections' to be distributed and are 2024-05-15T15:29:10,252 already explicitly excluding 'multiqc.templates.sections' via 2024-05-15T15:29:10,252 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,253 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,253 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,254 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,255 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,257 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,257 even if it does not contain any `.py` files. 2024-05-15T15:29:10,258 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,258 directory, all directories are treated like packages. 2024-05-15T15:29:10,259 ******************************************************************************** 2024-05-15T15:29:10,260 !! 2024-05-15T15:29:10,260 check.warn(importable) 2024-05-15T15:29:10,261 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.simple' is absent from the `packages` configuration. 2024-05-15T15:29:10,261 !! 2024-05-15T15:29:10,262 ******************************************************************************** 2024-05-15T15:29:10,263 ############################ 2024-05-15T15:29:10,263 # Package would be ignored # 2024-05-15T15:29:10,264 ############################ 2024-05-15T15:29:10,264 Python recognizes 'multiqc.templates.simple' as an importable package[^1], 2024-05-15T15:29:10,265 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,266 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,266 package, please make sure that 'multiqc.templates.simple' is explicitly added 2024-05-15T15:29:10,267 to the `packages` configuration field. 2024-05-15T15:29:10,268 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,269 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,269 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,270 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,271 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,272 If you don't want 'multiqc.templates.simple' to be distributed and are 2024-05-15T15:29:10,273 already explicitly excluding 'multiqc.templates.simple' via 2024-05-15T15:29:10,273 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,274 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,274 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,275 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,277 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,279 even if it does not contain any `.py` files. 2024-05-15T15:29:10,279 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,280 directory, all directories are treated like packages. 2024-05-15T15:29:10,281 ******************************************************************************** 2024-05-15T15:29:10,283 !! 2024-05-15T15:29:10,283 check.warn(importable) 2024-05-15T15:29:10,284 /tmp/pip-build-env-erqacd57/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.utils' is absent from the `packages` configuration. 2024-05-15T15:29:10,284 !! 2024-05-15T15:29:10,285 ******************************************************************************** 2024-05-15T15:29:10,286 ############################ 2024-05-15T15:29:10,286 # Package would be ignored # 2024-05-15T15:29:10,287 ############################ 2024-05-15T15:29:10,287 Python recognizes 'multiqc.utils' as an importable package[^1], 2024-05-15T15:29:10,287 but it is absent from setuptools' `packages` configuration. 2024-05-15T15:29:10,288 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-15T15:29:10,289 package, please make sure that 'multiqc.utils' is explicitly added 2024-05-15T15:29:10,289 to the `packages` configuration field. 2024-05-15T15:29:10,290 Alternatively, you can also rely on setuptools' discovery methods 2024-05-15T15:29:10,291 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-15T15:29:10,291 instead of `find_packages(...)`/`find:`). 2024-05-15T15:29:10,292 You can read more about "package discovery" on setuptools documentation page: 2024-05-15T15:29:10,293 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-15T15:29:10,295 If you don't want 'multiqc.utils' to be distributed and are 2024-05-15T15:29:10,296 already explicitly excluding 'multiqc.utils' via 2024-05-15T15:29:10,296 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-15T15:29:10,297 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-15T15:29:10,297 combination with a more fine grained `package-data` configuration. 2024-05-15T15:29:10,298 You can read more about "package data files" on setuptools documentation page: 2024-05-15T15:29:10,299 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-15T15:29:10,301 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-15T15:29:10,301 even if it does not contain any `.py` files. 2024-05-15T15:29:10,302 On the other hand, currently there is no concept of package data 2024-05-15T15:29:10,303 directory, all directories are treated like packages. 2024-05-15T15:29:10,303 ******************************************************************************** 2024-05-15T15:29:10,304 !! 2024-05-15T15:29:10,305 check.warn(importable) 2024-05-15T15:29:10,306 copying multiqc/config_defaults.yaml -> build/lib/multiqc 2024-05-15T15:29:10,306 copying multiqc/search_patterns.yaml -> build/lib/multiqc 2024-05-15T15:29:10,307 creating build/lib/multiqc/core 2024-05-15T15:29:10,307 copying multiqc/core/exceptions.py -> build/lib/multiqc/core 2024-05-15T15:29:10,308 copying multiqc/core/exec_modules.py -> build/lib/multiqc/core 2024-05-15T15:29:10,308 copying multiqc/core/file_search.py -> build/lib/multiqc/core 2024-05-15T15:29:10,309 copying multiqc/core/init_log.py -> build/lib/multiqc/core 2024-05-15T15:29:10,309 copying multiqc/core/plugin_hooks.py -> build/lib/multiqc/core 2024-05-15T15:29:10,310 copying multiqc/core/software_versions.py -> build/lib/multiqc/core 2024-05-15T15:29:10,311 copying multiqc/core/strict_helpers.py -> build/lib/multiqc/core 2024-05-15T15:29:10,311 copying multiqc/core/update_config.py -> build/lib/multiqc/core 2024-05-15T15:29:10,312 copying multiqc/core/version_check.py -> build/lib/multiqc/core 2024-05-15T15:29:10,313 copying multiqc/core/write_results.py -> build/lib/multiqc/core 2024-05-15T15:29:10,313 creating build/lib/multiqc/modules 2024-05-15T15:29:10,314 copying multiqc/modules/__init__.py -> build/lib/multiqc/modules 2024-05-15T15:29:10,314 copying multiqc/modules/profile_runtime.py -> build/lib/multiqc/modules 2024-05-15T15:29:10,315 copying multiqc/modules/software_versions.py -> build/lib/multiqc/modules 2024-05-15T15:29:10,315 creating build/lib/multiqc/modules/adapterremoval 2024-05-15T15:29:10,316 copying multiqc/modules/adapterremoval/__init__.py -> build/lib/multiqc/modules/adapterremoval 2024-05-15T15:29:10,316 copying multiqc/modules/adapterremoval/adapterremoval.py -> build/lib/multiqc/modules/adapterremoval 2024-05-15T15:29:10,317 creating build/lib/multiqc/modules/afterqc 2024-05-15T15:29:10,317 copying multiqc/modules/afterqc/__init__.py -> build/lib/multiqc/modules/afterqc 2024-05-15T15:29:10,318 copying multiqc/modules/afterqc/afterqc.py -> build/lib/multiqc/modules/afterqc 2024-05-15T15:29:10,318 creating build/lib/multiqc/modules/anglerfish 2024-05-15T15:29:10,319 copying multiqc/modules/anglerfish/__init__.py -> build/lib/multiqc/modules/anglerfish 2024-05-15T15:29:10,320 copying multiqc/modules/anglerfish/anglerfish.py -> build/lib/multiqc/modules/anglerfish 2024-05-15T15:29:10,321 creating build/lib/multiqc/modules/bakta 2024-05-15T15:29:10,321 copying multiqc/modules/bakta/__init__.py -> build/lib/multiqc/modules/bakta 2024-05-15T15:29:10,322 copying multiqc/modules/bakta/bakta.py -> build/lib/multiqc/modules/bakta 2024-05-15T15:29:10,322 creating build/lib/multiqc/modules/bamdst 2024-05-15T15:29:10,323 copying multiqc/modules/bamdst/__init__.py -> build/lib/multiqc/modules/bamdst 2024-05-15T15:29:10,324 copying multiqc/modules/bamdst/bamdst.py -> build/lib/multiqc/modules/bamdst 2024-05-15T15:29:10,324 creating build/lib/multiqc/modules/bamtools 2024-05-15T15:29:10,325 copying multiqc/modules/bamtools/__init__.py -> build/lib/multiqc/modules/bamtools 2024-05-15T15:29:10,326 copying multiqc/modules/bamtools/bamtools.py -> build/lib/multiqc/modules/bamtools 2024-05-15T15:29:10,326 copying multiqc/modules/bamtools/stats.py -> build/lib/multiqc/modules/bamtools 2024-05-15T15:29:10,327 creating build/lib/multiqc/modules/bbduk 2024-05-15T15:29:10,328 copying multiqc/modules/bbduk/__init__.py -> build/lib/multiqc/modules/bbduk 2024-05-15T15:29:10,328 copying multiqc/modules/bbduk/bbduk.py -> build/lib/multiqc/modules/bbduk 2024-05-15T15:29:10,329 creating build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,329 copying multiqc/modules/bbmap/__init__.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,330 copying multiqc/modules/bbmap/bbmap.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,331 copying multiqc/modules/bbmap/bbmap_filetypes.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,331 copying multiqc/modules/bbmap/plot_aqhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,332 copying multiqc/modules/bbmap/plot_basic_hist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,334 copying multiqc/modules/bbmap/plot_bhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,335 copying multiqc/modules/bbmap/plot_bqhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,336 copying multiqc/modules/bbmap/plot_covhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,337 copying multiqc/modules/bbmap/plot_idhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,338 copying multiqc/modules/bbmap/plot_ihist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,339 copying multiqc/modules/bbmap/plot_indelhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,340 copying multiqc/modules/bbmap/plot_mhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,341 copying multiqc/modules/bbmap/plot_qahist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,342 copying multiqc/modules/bbmap/plot_qchist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,343 copying multiqc/modules/bbmap/plot_qhist.py -> build/lib/multiqc/modules/bbmap 2024-05-15T15:29:10,343 creating build/lib/multiqc/modules/bcftools 2024-05-15T15:29:10,344 copying multiqc/modules/bcftools/__init__.py -> build/lib/multiqc/modules/bcftools 2024-05-15T15:29:10,344 copying multiqc/modules/bcftools/bcftools.py -> build/lib/multiqc/modules/bcftools 2024-05-15T15:29:10,345 copying multiqc/modules/bcftools/stats.py -> build/lib/multiqc/modules/bcftools 2024-05-15T15:29:10,346 creating build/lib/multiqc/modules/bcl2fastq 2024-05-15T15:29:10,346 copying multiqc/modules/bcl2fastq/__init__.py -> build/lib/multiqc/modules/bcl2fastq 2024-05-15T15:29:10,347 copying multiqc/modules/bcl2fastq/bcl2fastq.py -> build/lib/multiqc/modules/bcl2fastq 2024-05-15T15:29:10,348 creating build/lib/multiqc/modules/bclconvert 2024-05-15T15:29:10,349 copying multiqc/modules/bclconvert/__init__.py -> build/lib/multiqc/modules/bclconvert 2024-05-15T15:29:10,350 copying multiqc/modules/bclconvert/bclconvert.py -> build/lib/multiqc/modules/bclconvert 2024-05-15T15:29:10,350 creating build/lib/multiqc/modules/biobambam2 2024-05-15T15:29:10,351 copying multiqc/modules/biobambam2/__init__.py -> build/lib/multiqc/modules/biobambam2 2024-05-15T15:29:10,352 copying multiqc/modules/biobambam2/biobambam2.py -> build/lib/multiqc/modules/biobambam2 2024-05-15T15:29:10,353 creating build/lib/multiqc/modules/biobloomtools 2024-05-15T15:29:10,354 copying multiqc/modules/biobloomtools/__init__.py -> build/lib/multiqc/modules/biobloomtools 2024-05-15T15:29:10,354 copying multiqc/modules/biobloomtools/biobloomtools.py -> build/lib/multiqc/modules/biobloomtools 2024-05-15T15:29:10,355 creating build/lib/multiqc/modules/biscuit 2024-05-15T15:29:10,356 copying multiqc/modules/biscuit/__init__.py -> build/lib/multiqc/modules/biscuit 2024-05-15T15:29:10,356 copying multiqc/modules/biscuit/biscuit.py -> build/lib/multiqc/modules/biscuit 2024-05-15T15:29:10,357 creating build/lib/multiqc/modules/bismark 2024-05-15T15:29:10,358 copying multiqc/modules/bismark/__init__.py -> build/lib/multiqc/modules/bismark 2024-05-15T15:29:10,358 copying multiqc/modules/bismark/bismark.py -> build/lib/multiqc/modules/bismark 2024-05-15T15:29:10,359 creating build/lib/multiqc/modules/bowtie1 2024-05-15T15:29:10,360 copying multiqc/modules/bowtie1/__init__.py -> build/lib/multiqc/modules/bowtie1 2024-05-15T15:29:10,360 copying multiqc/modules/bowtie1/bowtie1.py -> build/lib/multiqc/modules/bowtie1 2024-05-15T15:29:10,361 creating build/lib/multiqc/modules/bowtie2 2024-05-15T15:29:10,362 copying multiqc/modules/bowtie2/__init__.py -> build/lib/multiqc/modules/bowtie2 2024-05-15T15:29:10,363 copying multiqc/modules/bowtie2/bowtie2.py -> build/lib/multiqc/modules/bowtie2 2024-05-15T15:29:10,363 creating build/lib/multiqc/modules/bracken 2024-05-15T15:29:10,364 copying multiqc/modules/bracken/__init__.py -> build/lib/multiqc/modules/bracken 2024-05-15T15:29:10,365 copying multiqc/modules/bracken/bracken.py -> build/lib/multiqc/modules/bracken 2024-05-15T15:29:10,365 creating build/lib/multiqc/modules/busco 2024-05-15T15:29:10,366 copying multiqc/modules/busco/__init__.py -> build/lib/multiqc/modules/busco 2024-05-15T15:29:10,366 copying multiqc/modules/busco/busco.py -> build/lib/multiqc/modules/busco 2024-05-15T15:29:10,367 creating build/lib/multiqc/modules/bustools 2024-05-15T15:29:10,367 copying multiqc/modules/bustools/__init__.py -> build/lib/multiqc/modules/bustools 2024-05-15T15:29:10,368 copying multiqc/modules/bustools/bustools.py -> build/lib/multiqc/modules/bustools 2024-05-15T15:29:10,369 creating build/lib/multiqc/modules/ccs 2024-05-15T15:29:10,369 copying multiqc/modules/ccs/__init__.py -> build/lib/multiqc/modules/ccs 2024-05-15T15:29:10,370 copying multiqc/modules/ccs/ccs.py -> build/lib/multiqc/modules/ccs 2024-05-15T15:29:10,370 creating build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,371 copying multiqc/modules/cellranger/__init__.py -> build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,372 copying multiqc/modules/cellranger/cellranger.py -> build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,372 copying multiqc/modules/cellranger/count.py -> build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,373 copying multiqc/modules/cellranger/utils.py -> build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,373 copying multiqc/modules/cellranger/vdj.py -> build/lib/multiqc/modules/cellranger 2024-05-15T15:29:10,373 creating build/lib/multiqc/modules/checkqc 2024-05-15T15:29:10,374 copying multiqc/modules/checkqc/__init__.py -> build/lib/multiqc/modules/checkqc 2024-05-15T15:29:10,374 copying multiqc/modules/checkqc/checkqc.py -> build/lib/multiqc/modules/checkqc 2024-05-15T15:29:10,375 creating build/lib/multiqc/modules/clipandmerge 2024-05-15T15:29:10,375 copying multiqc/modules/clipandmerge/__init__.py -> build/lib/multiqc/modules/clipandmerge 2024-05-15T15:29:10,376 copying multiqc/modules/clipandmerge/clipandmerge.py -> build/lib/multiqc/modules/clipandmerge 2024-05-15T15:29:10,376 creating build/lib/multiqc/modules/clusterflow 2024-05-15T15:29:10,377 copying multiqc/modules/clusterflow/__init__.py -> build/lib/multiqc/modules/clusterflow 2024-05-15T15:29:10,378 copying multiqc/modules/clusterflow/clusterflow.py -> build/lib/multiqc/modules/clusterflow 2024-05-15T15:29:10,378 creating build/lib/multiqc/modules/conpair 2024-05-15T15:29:10,379 copying multiqc/modules/conpair/__init__.py -> build/lib/multiqc/modules/conpair 2024-05-15T15:29:10,379 copying multiqc/modules/conpair/conpair.py -> build/lib/multiqc/modules/conpair 2024-05-15T15:29:10,380 creating build/lib/multiqc/modules/custom_content 2024-05-15T15:29:10,380 copying multiqc/modules/custom_content/__init__.py -> build/lib/multiqc/modules/custom_content 2024-05-15T15:29:10,381 copying multiqc/modules/custom_content/custom_content.py -> build/lib/multiqc/modules/custom_content 2024-05-15T15:29:10,381 creating build/lib/multiqc/modules/cutadapt 2024-05-15T15:29:10,382 copying multiqc/modules/cutadapt/__init__.py -> build/lib/multiqc/modules/cutadapt 2024-05-15T15:29:10,382 copying multiqc/modules/cutadapt/cutadapt.py -> build/lib/multiqc/modules/cutadapt 2024-05-15T15:29:10,383 creating build/lib/multiqc/modules/damageprofiler 2024-05-15T15:29:10,383 copying multiqc/modules/damageprofiler/__init__.py -> build/lib/multiqc/modules/damageprofiler 2024-05-15T15:29:10,384 copying multiqc/modules/damageprofiler/damageprofiler.py -> build/lib/multiqc/modules/damageprofiler 2024-05-15T15:29:10,384 creating build/lib/multiqc/modules/dedup 2024-05-15T15:29:10,385 copying multiqc/modules/dedup/__init__.py -> build/lib/multiqc/modules/dedup 2024-05-15T15:29:10,385 copying multiqc/modules/dedup/dedup.py -> build/lib/multiqc/modules/dedup 2024-05-15T15:29:10,386 creating build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,386 copying multiqc/modules/deeptools/__init__.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,387 copying multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,388 copying multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,388 copying multiqc/modules/deeptools/deeptools.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,389 copying multiqc/modules/deeptools/estimateReadFiltering.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,389 copying multiqc/modules/deeptools/plotCorrelation.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,390 copying multiqc/modules/deeptools/plotCoverage.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,390 copying multiqc/modules/deeptools/plotEnrichment.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,391 copying multiqc/modules/deeptools/plotFingerprint.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,391 copying multiqc/modules/deeptools/plotPCA.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,392 copying multiqc/modules/deeptools/plotProfile.py -> build/lib/multiqc/modules/deeptools 2024-05-15T15:29:10,393 creating build/lib/multiqc/modules/diamond 2024-05-15T15:29:10,393 copying multiqc/modules/diamond/__init__.py -> build/lib/multiqc/modules/diamond 2024-05-15T15:29:10,394 copying multiqc/modules/diamond/diamond.py -> build/lib/multiqc/modules/diamond 2024-05-15T15:29:10,394 creating build/lib/multiqc/modules/disambiguate 2024-05-15T15:29:10,394 copying multiqc/modules/disambiguate/__init__.py -> build/lib/multiqc/modules/disambiguate 2024-05-15T15:29:10,395 copying multiqc/modules/disambiguate/disambiguate.py -> build/lib/multiqc/modules/disambiguate 2024-05-15T15:29:10,395 creating build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,396 copying multiqc/modules/dragen/__init__.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,396 copying multiqc/modules/dragen/coverage_hist.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,397 copying multiqc/modules/dragen/coverage_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,397 copying multiqc/modules/dragen/coverage_per_contig.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,398 copying multiqc/modules/dragen/dragen.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,398 copying multiqc/modules/dragen/dragen_gc_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,399 copying multiqc/modules/dragen/fragment_length.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,399 copying multiqc/modules/dragen/mapping_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,400 copying multiqc/modules/dragen/overall_mean_cov.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,401 copying multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,401 copying multiqc/modules/dragen/rna_quant_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,402 copying multiqc/modules/dragen/rna_transcript_cov.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,403 copying multiqc/modules/dragen/sc_atac_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,404 copying multiqc/modules/dragen/sc_rna_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,405 copying multiqc/modules/dragen/time_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,405 copying multiqc/modules/dragen/trimmer_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,406 copying multiqc/modules/dragen/utils.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,406 copying multiqc/modules/dragen/vc_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-15T15:29:10,407 creating build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,407 copying multiqc/modules/dragen_fastqc/__init__.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,408 copying multiqc/modules/dragen_fastqc/base_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,408 copying multiqc/modules/dragen_fastqc/content_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,409 copying multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,409 copying multiqc/modules/dragen_fastqc/gc_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,410 copying multiqc/modules/dragen_fastqc/read_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,410 copying multiqc/modules/dragen_fastqc/util.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-15T15:29:10,411 creating build/lib/multiqc/modules/dragen_fastqc/assets 2024-05-15T15:29:10,411 creating build/lib/multiqc/modules/dragen_fastqc/assets/js 2024-05-15T15:29:10,412 copying multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/lib/multiqc/modules/dragen_fastqc/assets/js 2024-05-15T15:29:10,413 creating build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:10,413 copying multiqc/modules/eigenstratdatabasetools/__init__.py -> build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:10,413 copying multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:10,414 creating build/lib/multiqc/modules/fastp 2024-05-15T15:29:10,414 copying multiqc/modules/fastp/__init__.py -> build/lib/multiqc/modules/fastp 2024-05-15T15:29:10,415 copying multiqc/modules/fastp/fastp.py -> build/lib/multiqc/modules/fastp 2024-05-15T15:29:10,415 creating build/lib/multiqc/modules/fastq_screen 2024-05-15T15:29:10,416 copying multiqc/modules/fastq_screen/__init__.py -> build/lib/multiqc/modules/fastq_screen 2024-05-15T15:29:10,416 copying multiqc/modules/fastq_screen/fastq_screen.py -> build/lib/multiqc/modules/fastq_screen 2024-05-15T15:29:10,417 creating build/lib/multiqc/modules/fastqc 2024-05-15T15:29:10,417 copying multiqc/modules/fastqc/__init__.py -> build/lib/multiqc/modules/fastqc 2024-05-15T15:29:10,418 copying multiqc/modules/fastqc/fastqc.py -> build/lib/multiqc/modules/fastqc 2024-05-15T15:29:10,418 creating build/lib/multiqc/modules/fastqc/assets 2024-05-15T15:29:10,418 creating build/lib/multiqc/modules/fastqc/assets/css 2024-05-15T15:29:10,419 copying multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/lib/multiqc/modules/fastqc/assets/css 2024-05-15T15:29:10,419 creating build/lib/multiqc/modules/fastqc/assets/js 2024-05-15T15:29:10,420 copying multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/lib/multiqc/modules/fastqc/assets/js 2024-05-15T15:29:10,420 creating build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:10,421 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:10,421 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:10,422 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:10,422 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:10,423 creating build/lib/multiqc/modules/featureCounts 2024-05-15T15:29:10,423 copying multiqc/modules/featureCounts/__init__.py -> build/lib/multiqc/modules/featureCounts 2024-05-15T15:29:10,423 copying multiqc/modules/featureCounts/feature_counts.py -> build/lib/multiqc/modules/featureCounts 2024-05-15T15:29:10,424 creating build/lib/multiqc/modules/fgbio 2024-05-15T15:29:10,425 copying multiqc/modules/fgbio/ErrorRateByReadPosition.py -> build/lib/multiqc/modules/fgbio 2024-05-15T15:29:10,425 copying multiqc/modules/fgbio/__init__.py -> build/lib/multiqc/modules/fgbio 2024-05-15T15:29:10,426 copying multiqc/modules/fgbio/fgbio.py -> build/lib/multiqc/modules/fgbio 2024-05-15T15:29:10,426 copying multiqc/modules/fgbio/groupreadsbyumi.py -> build/lib/multiqc/modules/fgbio 2024-05-15T15:29:10,426 creating build/lib/multiqc/modules/filtlong 2024-05-15T15:29:10,427 copying multiqc/modules/filtlong/__init__.py -> build/lib/multiqc/modules/filtlong 2024-05-15T15:29:10,427 copying multiqc/modules/filtlong/filtlong.py -> build/lib/multiqc/modules/filtlong 2024-05-15T15:29:10,428 creating build/lib/multiqc/modules/flash 2024-05-15T15:29:10,429 copying multiqc/modules/flash/__init__.py -> build/lib/multiqc/modules/flash 2024-05-15T15:29:10,429 copying multiqc/modules/flash/flash.py -> build/lib/multiqc/modules/flash 2024-05-15T15:29:10,431 creating build/lib/multiqc/modules/flexbar 2024-05-15T15:29:10,432 copying multiqc/modules/flexbar/__init__.py -> build/lib/multiqc/modules/flexbar 2024-05-15T15:29:10,434 copying multiqc/modules/flexbar/flexbar.py -> build/lib/multiqc/modules/flexbar 2024-05-15T15:29:10,436 creating build/lib/multiqc/modules/freyja 2024-05-15T15:29:10,437 copying multiqc/modules/freyja/__init__.py -> build/lib/multiqc/modules/freyja 2024-05-15T15:29:10,439 copying multiqc/modules/freyja/freyja.py -> build/lib/multiqc/modules/freyja 2024-05-15T15:29:10,441 creating build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,442 copying multiqc/modules/gatk/__init__.py -> build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,444 copying multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,447 copying multiqc/modules/gatk/base_recalibrator.py -> build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,449 copying multiqc/modules/gatk/gatk.py -> build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,451 copying multiqc/modules/gatk/varianteval.py -> build/lib/multiqc/modules/gatk 2024-05-15T15:29:10,454 creating build/lib/multiqc/modules/gffcompare 2024-05-15T15:29:10,454 copying multiqc/modules/gffcompare/__init__.py -> build/lib/multiqc/modules/gffcompare 2024-05-15T15:29:10,456 copying multiqc/modules/gffcompare/gffcompare.py -> build/lib/multiqc/modules/gffcompare 2024-05-15T15:29:10,459 creating build/lib/multiqc/modules/goleft_indexcov 2024-05-15T15:29:10,460 copying multiqc/modules/goleft_indexcov/__init__.py -> build/lib/multiqc/modules/goleft_indexcov 2024-05-15T15:29:10,462 copying multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/lib/multiqc/modules/goleft_indexcov 2024-05-15T15:29:10,464 creating build/lib/multiqc/modules/gopeaks 2024-05-15T15:29:10,465 copying multiqc/modules/gopeaks/__init__.py -> build/lib/multiqc/modules/gopeaks 2024-05-15T15:29:10,467 copying multiqc/modules/gopeaks/gopeaks.py -> build/lib/multiqc/modules/gopeaks 2024-05-15T15:29:10,469 creating build/lib/multiqc/modules/happy 2024-05-15T15:29:10,470 copying multiqc/modules/happy/__init__.py -> build/lib/multiqc/modules/happy 2024-05-15T15:29:10,472 copying multiqc/modules/happy/happy.py -> build/lib/multiqc/modules/happy 2024-05-15T15:29:10,475 creating build/lib/multiqc/modules/hicexplorer 2024-05-15T15:29:10,476 copying multiqc/modules/hicexplorer/__init__.py -> build/lib/multiqc/modules/hicexplorer 2024-05-15T15:29:10,478 copying multiqc/modules/hicexplorer/hicexplorer.py -> build/lib/multiqc/modules/hicexplorer 2024-05-15T15:29:10,480 creating build/lib/multiqc/modules/hicpro 2024-05-15T15:29:10,481 copying multiqc/modules/hicpro/__init__.py -> build/lib/multiqc/modules/hicpro 2024-05-15T15:29:10,483 copying multiqc/modules/hicpro/hicpro.py -> build/lib/multiqc/modules/hicpro 2024-05-15T15:29:10,486 creating build/lib/multiqc/modules/hicup 2024-05-15T15:29:10,487 copying multiqc/modules/hicup/__init__.py -> build/lib/multiqc/modules/hicup 2024-05-15T15:29:10,489 copying multiqc/modules/hicup/hicup.py -> build/lib/multiqc/modules/hicup 2024-05-15T15:29:10,491 creating build/lib/multiqc/modules/hifiasm 2024-05-15T15:29:10,492 copying multiqc/modules/hifiasm/__init__.py -> build/lib/multiqc/modules/hifiasm 2024-05-15T15:29:10,494 copying multiqc/modules/hifiasm/hifiasm.py -> build/lib/multiqc/modules/hifiasm 2024-05-15T15:29:10,496 creating build/lib/multiqc/modules/hisat2 2024-05-15T15:29:10,497 copying multiqc/modules/hisat2/__init__.py -> build/lib/multiqc/modules/hisat2 2024-05-15T15:29:10,499 copying multiqc/modules/hisat2/hisat2.py -> build/lib/multiqc/modules/hisat2 2024-05-15T15:29:10,501 creating build/lib/multiqc/modules/homer 2024-05-15T15:29:10,502 copying multiqc/modules/homer/__init__.py -> build/lib/multiqc/modules/homer 2024-05-15T15:29:10,505 copying multiqc/modules/homer/findpeaks.py -> build/lib/multiqc/modules/homer 2024-05-15T15:29:10,507 copying multiqc/modules/homer/homer.py -> build/lib/multiqc/modules/homer 2024-05-15T15:29:10,509 copying multiqc/modules/homer/tagdirectory.py -> build/lib/multiqc/modules/homer 2024-05-15T15:29:10,512 creating build/lib/multiqc/modules/hops 2024-05-15T15:29:10,512 copying multiqc/modules/hops/__init__.py -> build/lib/multiqc/modules/hops 2024-05-15T15:29:10,514 copying multiqc/modules/hops/hops.py -> build/lib/multiqc/modules/hops 2024-05-15T15:29:10,516 creating build/lib/multiqc/modules/hostile 2024-05-15T15:29:10,517 copying multiqc/modules/hostile/__init__.py -> build/lib/multiqc/modules/hostile 2024-05-15T15:29:10,519 copying multiqc/modules/hostile/hostile.py -> build/lib/multiqc/modules/hostile 2024-05-15T15:29:10,521 creating build/lib/multiqc/modules/htseq 2024-05-15T15:29:10,522 copying multiqc/modules/htseq/__init__.py -> build/lib/multiqc/modules/htseq 2024-05-15T15:29:10,524 copying multiqc/modules/htseq/htseq.py -> build/lib/multiqc/modules/htseq 2024-05-15T15:29:10,526 creating build/lib/multiqc/modules/humid 2024-05-15T15:29:10,527 copying multiqc/modules/humid/__init__.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,529 copying multiqc/modules/humid/clusters.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,531 copying multiqc/modules/humid/counts.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,533 copying multiqc/modules/humid/humid.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,535 copying multiqc/modules/humid/neighbours.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,537 copying multiqc/modules/humid/stats.py -> build/lib/multiqc/modules/humid 2024-05-15T15:29:10,539 creating build/lib/multiqc/modules/interop 2024-05-15T15:29:10,540 copying multiqc/modules/interop/__init__.py -> build/lib/multiqc/modules/interop 2024-05-15T15:29:10,542 copying multiqc/modules/interop/interop.py -> build/lib/multiqc/modules/interop 2024-05-15T15:29:10,544 creating build/lib/multiqc/modules/isoseq 2024-05-15T15:29:10,545 copying multiqc/modules/isoseq/__init__.py -> build/lib/multiqc/modules/isoseq 2024-05-15T15:29:10,547 copying multiqc/modules/isoseq/isoseq.py -> build/lib/multiqc/modules/isoseq 2024-05-15T15:29:10,550 creating build/lib/multiqc/modules/ivar 2024-05-15T15:29:10,551 copying multiqc/modules/ivar/__init__.py -> build/lib/multiqc/modules/ivar 2024-05-15T15:29:10,553 copying multiqc/modules/ivar/ivar.py -> build/lib/multiqc/modules/ivar 2024-05-15T15:29:10,556 creating build/lib/multiqc/modules/jcvi 2024-05-15T15:29:10,556 copying multiqc/modules/jcvi/__init__.py -> build/lib/multiqc/modules/jcvi 2024-05-15T15:29:10,559 copying multiqc/modules/jcvi/jcvi.py -> build/lib/multiqc/modules/jcvi 2024-05-15T15:29:10,561 creating build/lib/multiqc/modules/jellyfish 2024-05-15T15:29:10,562 copying multiqc/modules/jellyfish/__init__.py -> build/lib/multiqc/modules/jellyfish 2024-05-15T15:29:10,565 copying multiqc/modules/jellyfish/jellyfish.py -> build/lib/multiqc/modules/jellyfish 2024-05-15T15:29:10,567 creating build/lib/multiqc/modules/kaiju 2024-05-15T15:29:10,568 copying multiqc/modules/kaiju/__init__.py -> build/lib/multiqc/modules/kaiju 2024-05-15T15:29:10,570 copying multiqc/modules/kaiju/kaiju.py -> build/lib/multiqc/modules/kaiju 2024-05-15T15:29:10,573 creating build/lib/multiqc/modules/kallisto 2024-05-15T15:29:10,574 copying multiqc/modules/kallisto/__init__.py -> build/lib/multiqc/modules/kallisto 2024-05-15T15:29:10,576 copying multiqc/modules/kallisto/kallisto.py -> build/lib/multiqc/modules/kallisto 2024-05-15T15:29:10,579 creating build/lib/multiqc/modules/kat 2024-05-15T15:29:10,580 copying multiqc/modules/kat/__init__.py -> build/lib/multiqc/modules/kat 2024-05-15T15:29:10,582 copying multiqc/modules/kat/kat.py -> build/lib/multiqc/modules/kat 2024-05-15T15:29:10,584 creating build/lib/multiqc/modules/kraken 2024-05-15T15:29:10,585 copying multiqc/modules/kraken/__init__.py -> build/lib/multiqc/modules/kraken 2024-05-15T15:29:10,588 copying multiqc/modules/kraken/kraken.py -> build/lib/multiqc/modules/kraken 2024-05-15T15:29:10,591 creating build/lib/multiqc/modules/leehom 2024-05-15T15:29:10,592 copying multiqc/modules/leehom/__init__.py -> build/lib/multiqc/modules/leehom 2024-05-15T15:29:10,594 copying multiqc/modules/leehom/leehom.py -> build/lib/multiqc/modules/leehom 2024-05-15T15:29:10,596 creating build/lib/multiqc/modules/librarian 2024-05-15T15:29:10,597 copying multiqc/modules/librarian/__init__.py -> build/lib/multiqc/modules/librarian 2024-05-15T15:29:10,599 copying multiqc/modules/librarian/librarian.py -> build/lib/multiqc/modules/librarian 2024-05-15T15:29:10,602 creating build/lib/multiqc/modules/lima 2024-05-15T15:29:10,603 copying multiqc/modules/lima/__init__.py -> build/lib/multiqc/modules/lima 2024-05-15T15:29:10,605 copying multiqc/modules/lima/lima.py -> build/lib/multiqc/modules/lima 2024-05-15T15:29:10,608 creating build/lib/multiqc/modules/longranger 2024-05-15T15:29:10,609 copying multiqc/modules/longranger/__init__.py -> build/lib/multiqc/modules/longranger 2024-05-15T15:29:10,611 copying multiqc/modules/longranger/longranger.py -> build/lib/multiqc/modules/longranger 2024-05-15T15:29:10,613 creating build/lib/multiqc/modules/macs2 2024-05-15T15:29:10,614 copying multiqc/modules/macs2/__init__.py -> build/lib/multiqc/modules/macs2 2024-05-15T15:29:10,617 copying multiqc/modules/macs2/macs2.py -> build/lib/multiqc/modules/macs2 2024-05-15T15:29:10,619 creating build/lib/multiqc/modules/malt 2024-05-15T15:29:10,620 copying multiqc/modules/malt/__init__.py -> build/lib/multiqc/modules/malt 2024-05-15T15:29:10,622 copying multiqc/modules/malt/malt.py -> build/lib/multiqc/modules/malt 2024-05-15T15:29:10,625 creating build/lib/multiqc/modules/mapdamage 2024-05-15T15:29:10,626 copying multiqc/modules/mapdamage/__init__.py -> build/lib/multiqc/modules/mapdamage 2024-05-15T15:29:10,628 copying multiqc/modules/mapdamage/mapdamage.py -> build/lib/multiqc/modules/mapdamage 2024-05-15T15:29:10,631 creating build/lib/multiqc/modules/megahit 2024-05-15T15:29:10,632 copying multiqc/modules/megahit/__init__.py -> build/lib/multiqc/modules/megahit 2024-05-15T15:29:10,634 copying multiqc/modules/megahit/megahit.py -> build/lib/multiqc/modules/megahit 2024-05-15T15:29:10,636 creating build/lib/multiqc/modules/metaphlan 2024-05-15T15:29:10,637 copying multiqc/modules/metaphlan/__init__.py -> build/lib/multiqc/modules/metaphlan 2024-05-15T15:29:10,639 copying multiqc/modules/metaphlan/metaphlan.py -> build/lib/multiqc/modules/metaphlan 2024-05-15T15:29:10,642 creating build/lib/multiqc/modules/methylqa 2024-05-15T15:29:10,643 copying multiqc/modules/methylqa/__init__.py -> build/lib/multiqc/modules/methylqa 2024-05-15T15:29:10,645 copying multiqc/modules/methylqa/methylqa.py -> build/lib/multiqc/modules/methylqa 2024-05-15T15:29:10,647 creating build/lib/multiqc/modules/minionqc 2024-05-15T15:29:10,649 copying multiqc/modules/minionqc/__init__.py -> build/lib/multiqc/modules/minionqc 2024-05-15T15:29:10,651 copying multiqc/modules/minionqc/minionqc.py -> build/lib/multiqc/modules/minionqc 2024-05-15T15:29:10,653 creating build/lib/multiqc/modules/mirtop 2024-05-15T15:29:10,654 copying multiqc/modules/mirtop/__init__.py -> build/lib/multiqc/modules/mirtop 2024-05-15T15:29:10,656 copying multiqc/modules/mirtop/mirtop.py -> build/lib/multiqc/modules/mirtop 2024-05-15T15:29:10,659 creating build/lib/multiqc/modules/mirtrace 2024-05-15T15:29:10,660 copying multiqc/modules/mirtrace/__init__.py -> build/lib/multiqc/modules/mirtrace 2024-05-15T15:29:10,662 copying multiqc/modules/mirtrace/mirtrace.py -> build/lib/multiqc/modules/mirtrace 2024-05-15T15:29:10,665 creating build/lib/multiqc/modules/mosdepth 2024-05-15T15:29:10,666 copying multiqc/modules/mosdepth/__init__.py -> build/lib/multiqc/modules/mosdepth 2024-05-15T15:29:10,668 copying multiqc/modules/mosdepth/mosdepth.py -> build/lib/multiqc/modules/mosdepth 2024-05-15T15:29:10,671 creating build/lib/multiqc/modules/motus 2024-05-15T15:29:10,672 copying multiqc/modules/motus/__init__.py -> build/lib/multiqc/modules/motus 2024-05-15T15:29:10,674 copying multiqc/modules/motus/motus.py -> build/lib/multiqc/modules/motus 2024-05-15T15:29:10,677 creating build/lib/multiqc/modules/mtnucratio 2024-05-15T15:29:10,678 copying multiqc/modules/mtnucratio/__init__.py -> build/lib/multiqc/modules/mtnucratio 2024-05-15T15:29:10,680 copying multiqc/modules/mtnucratio/mtnucratio.py -> build/lib/multiqc/modules/mtnucratio 2024-05-15T15:29:10,682 creating build/lib/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:10,682 copying multiqc/modules/multivcfanalyzer/__init__.py -> build/lib/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:10,685 copying multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/lib/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:10,687 creating build/lib/multiqc/modules/nanostat 2024-05-15T15:29:10,688 copying multiqc/modules/nanostat/__init__.py -> build/lib/multiqc/modules/nanostat 2024-05-15T15:29:10,690 copying multiqc/modules/nanostat/nanostat.py -> build/lib/multiqc/modules/nanostat 2024-05-15T15:29:10,693 creating build/lib/multiqc/modules/nextclade 2024-05-15T15:29:10,693 copying multiqc/modules/nextclade/__init__.py -> build/lib/multiqc/modules/nextclade 2024-05-15T15:29:10,696 copying multiqc/modules/nextclade/nextclade.py -> build/lib/multiqc/modules/nextclade 2024-05-15T15:29:10,698 creating build/lib/multiqc/modules/ngsderive 2024-05-15T15:29:10,699 copying multiqc/modules/ngsderive/__init__.py -> build/lib/multiqc/modules/ngsderive 2024-05-15T15:29:10,701 copying multiqc/modules/ngsderive/ngsderive.py -> build/lib/multiqc/modules/ngsderive 2024-05-15T15:29:10,704 creating build/lib/multiqc/modules/nonpareil 2024-05-15T15:29:10,705 copying multiqc/modules/nonpareil/__init__.py -> build/lib/multiqc/modules/nonpareil 2024-05-15T15:29:10,707 copying multiqc/modules/nonpareil/nonpareil.py -> build/lib/multiqc/modules/nonpareil 2024-05-15T15:29:10,710 creating build/lib/multiqc/modules/odgi 2024-05-15T15:29:10,711 copying multiqc/modules/odgi/__init__.py -> build/lib/multiqc/modules/odgi 2024-05-15T15:29:10,713 copying multiqc/modules/odgi/odgi.py -> build/lib/multiqc/modules/odgi 2024-05-15T15:29:10,716 creating build/lib/multiqc/modules/optitype 2024-05-15T15:29:10,718 copying multiqc/modules/optitype/__init__.py -> build/lib/multiqc/modules/optitype 2024-05-15T15:29:10,721 copying multiqc/modules/optitype/optitype.py -> build/lib/multiqc/modules/optitype 2024-05-15T15:29:10,724 creating build/lib/multiqc/modules/pangolin 2024-05-15T15:29:10,725 copying multiqc/modules/pangolin/__init__.py -> build/lib/multiqc/modules/pangolin 2024-05-15T15:29:10,727 copying multiqc/modules/pangolin/pangolin.py -> build/lib/multiqc/modules/pangolin 2024-05-15T15:29:10,729 creating build/lib/multiqc/modules/pbmarkdup 2024-05-15T15:29:10,730 copying multiqc/modules/pbmarkdup/__init__.py -> build/lib/multiqc/modules/pbmarkdup 2024-05-15T15:29:10,732 copying multiqc/modules/pbmarkdup/pbmarkdup.py -> build/lib/multiqc/modules/pbmarkdup 2024-05-15T15:29:10,735 creating build/lib/multiqc/modules/peddy 2024-05-15T15:29:10,736 copying multiqc/modules/peddy/__init__.py -> build/lib/multiqc/modules/peddy 2024-05-15T15:29:10,738 copying multiqc/modules/peddy/peddy.py -> build/lib/multiqc/modules/peddy 2024-05-15T15:29:10,741 creating build/lib/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:10,742 copying multiqc/modules/phantompeakqualtools/__init__.py -> build/lib/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:10,744 copying multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/lib/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:10,746 creating build/lib/multiqc/modules/picard 2024-05-15T15:29:10,747 copying multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,750 copying multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,752 copying multiqc/modules/picard/CrosscheckFingerprints.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,755 copying multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,758 copying multiqc/modules/picard/GcBiasMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,760 copying multiqc/modules/picard/HsMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,763 copying multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,765 copying multiqc/modules/picard/IlluminaLaneMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,767 copying multiqc/modules/picard/InsertSizeMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,770 copying multiqc/modules/picard/MarkDuplicates.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,773 copying multiqc/modules/picard/MarkIlluminaAdapters.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,775 copying multiqc/modules/picard/OxoGMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,777 copying multiqc/modules/picard/QualityByCycleMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,779 copying multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,781 copying multiqc/modules/picard/QualityYieldMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,783 copying multiqc/modules/picard/RnaSeqMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,786 copying multiqc/modules/picard/RrbsSummaryMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,788 copying multiqc/modules/picard/TargetedPcrMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,790 copying multiqc/modules/picard/ValidateSamFile.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,793 copying multiqc/modules/picard/VariantCallingMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,796 copying multiqc/modules/picard/WgsMetrics.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,799 copying multiqc/modules/picard/__init__.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,801 copying multiqc/modules/picard/picard.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,803 copying multiqc/modules/picard/util.py -> build/lib/multiqc/modules/picard 2024-05-15T15:29:10,805 creating build/lib/multiqc/modules/porechop 2024-05-15T15:29:10,806 copying multiqc/modules/porechop/__init__.py -> build/lib/multiqc/modules/porechop 2024-05-15T15:29:10,809 copying multiqc/modules/porechop/porechop.py -> build/lib/multiqc/modules/porechop 2024-05-15T15:29:10,811 creating build/lib/multiqc/modules/preseq 2024-05-15T15:29:10,812 copying multiqc/modules/preseq/__init__.py -> build/lib/multiqc/modules/preseq 2024-05-15T15:29:10,814 copying multiqc/modules/preseq/preseq.py -> build/lib/multiqc/modules/preseq 2024-05-15T15:29:10,817 creating build/lib/multiqc/modules/prinseqplusplus 2024-05-15T15:29:10,818 copying multiqc/modules/prinseqplusplus/__init__.py -> build/lib/multiqc/modules/prinseqplusplus 2024-05-15T15:29:10,820 copying multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/lib/multiqc/modules/prinseqplusplus 2024-05-15T15:29:10,823 creating build/lib/multiqc/modules/prokka 2024-05-15T15:29:10,824 copying multiqc/modules/prokka/__init__.py -> build/lib/multiqc/modules/prokka 2024-05-15T15:29:10,826 copying multiqc/modules/prokka/prokka.py -> build/lib/multiqc/modules/prokka 2024-05-15T15:29:10,828 creating build/lib/multiqc/modules/purple 2024-05-15T15:29:10,829 copying multiqc/modules/purple/__init__.py -> build/lib/multiqc/modules/purple 2024-05-15T15:29:10,831 copying multiqc/modules/purple/purple.py -> build/lib/multiqc/modules/purple 2024-05-15T15:29:10,834 creating build/lib/multiqc/modules/pychopper 2024-05-15T15:29:10,835 copying multiqc/modules/pychopper/__init__.py -> build/lib/multiqc/modules/pychopper 2024-05-15T15:29:10,837 copying multiqc/modules/pychopper/pychopper.py -> build/lib/multiqc/modules/pychopper 2024-05-15T15:29:10,839 creating build/lib/multiqc/modules/pycoqc 2024-05-15T15:29:10,840 copying multiqc/modules/pycoqc/__init__.py -> build/lib/multiqc/modules/pycoqc 2024-05-15T15:29:10,843 copying multiqc/modules/pycoqc/pycoqc.py -> build/lib/multiqc/modules/pycoqc 2024-05-15T15:29:10,845 creating build/lib/multiqc/modules/qc3C 2024-05-15T15:29:10,846 copying multiqc/modules/qc3C/__init__.py -> build/lib/multiqc/modules/qc3C 2024-05-15T15:29:10,849 copying multiqc/modules/qc3C/qc3C.py -> build/lib/multiqc/modules/qc3C 2024-05-15T15:29:10,852 creating build/lib/multiqc/modules/qorts 2024-05-15T15:29:10,853 copying multiqc/modules/qorts/__init__.py -> build/lib/multiqc/modules/qorts 2024-05-15T15:29:10,855 copying multiqc/modules/qorts/qorts.py -> build/lib/multiqc/modules/qorts 2024-05-15T15:29:10,858 creating build/lib/multiqc/modules/qualimap 2024-05-15T15:29:10,859 copying multiqc/modules/qualimap/QM_BamQC.py -> build/lib/multiqc/modules/qualimap 2024-05-15T15:29:10,862 copying multiqc/modules/qualimap/QM_RNASeq.py -> build/lib/multiqc/modules/qualimap 2024-05-15T15:29:10,865 copying multiqc/modules/qualimap/__init__.py -> build/lib/multiqc/modules/qualimap 2024-05-15T15:29:10,867 copying multiqc/modules/qualimap/qualimap.py -> build/lib/multiqc/modules/qualimap 2024-05-15T15:29:10,869 creating build/lib/multiqc/modules/quast 2024-05-15T15:29:10,870 copying multiqc/modules/quast/__init__.py -> build/lib/multiqc/modules/quast 2024-05-15T15:29:10,873 copying multiqc/modules/quast/quast.py -> build/lib/multiqc/modules/quast 2024-05-15T15:29:10,876 creating build/lib/multiqc/modules/rna_seqc 2024-05-15T15:29:10,877 copying multiqc/modules/rna_seqc/__init__.py -> build/lib/multiqc/modules/rna_seqc 2024-05-15T15:29:10,879 copying multiqc/modules/rna_seqc/rna_seqc.py -> build/lib/multiqc/modules/rna_seqc 2024-05-15T15:29:10,881 creating build/lib/multiqc/modules/rockhopper 2024-05-15T15:29:10,882 copying multiqc/modules/rockhopper/__init__.py -> build/lib/multiqc/modules/rockhopper 2024-05-15T15:29:10,885 copying multiqc/modules/rockhopper/rockhopper.py -> build/lib/multiqc/modules/rockhopper 2024-05-15T15:29:10,887 creating build/lib/multiqc/modules/rsem 2024-05-15T15:29:10,888 copying multiqc/modules/rsem/__init__.py -> build/lib/multiqc/modules/rsem 2024-05-15T15:29:10,890 copying multiqc/modules/rsem/rsem.py -> build/lib/multiqc/modules/rsem 2024-05-15T15:29:10,893 creating build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,893 copying multiqc/modules/rseqc/__init__.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,896 copying multiqc/modules/rseqc/bam_stat.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,898 copying multiqc/modules/rseqc/gene_body_coverage.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,900 copying multiqc/modules/rseqc/infer_experiment.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,902 copying multiqc/modules/rseqc/inner_distance.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,904 copying multiqc/modules/rseqc/junction_annotation.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,907 copying multiqc/modules/rseqc/junction_saturation.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,909 copying multiqc/modules/rseqc/read_distribution.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,911 copying multiqc/modules/rseqc/read_duplication.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,913 copying multiqc/modules/rseqc/read_gc.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,916 copying multiqc/modules/rseqc/rseqc.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,918 copying multiqc/modules/rseqc/tin.py -> build/lib/multiqc/modules/rseqc 2024-05-15T15:29:10,920 creating build/lib/multiqc/modules/rseqc/assets 2024-05-15T15:29:10,920 creating build/lib/multiqc/modules/rseqc/assets/js 2024-05-15T15:29:10,922 copying multiqc/modules/rseqc/assets/js/multiqc_rseqc.js -> build/lib/multiqc/modules/rseqc/assets/js 2024-05-15T15:29:10,923 creating build/lib/multiqc/modules/salmon 2024-05-15T15:29:10,925 copying multiqc/modules/salmon/__init__.py -> build/lib/multiqc/modules/salmon 2024-05-15T15:29:10,927 copying multiqc/modules/salmon/salmon.py -> build/lib/multiqc/modules/salmon 2024-05-15T15:29:10,929 creating build/lib/multiqc/modules/sambamba 2024-05-15T15:29:10,930 copying multiqc/modules/sambamba/__init__.py -> build/lib/multiqc/modules/sambamba 2024-05-15T15:29:10,932 copying multiqc/modules/sambamba/markdup.py -> build/lib/multiqc/modules/sambamba 2024-05-15T15:29:10,934 copying multiqc/modules/sambamba/sambamba.py -> build/lib/multiqc/modules/sambamba 2024-05-15T15:29:10,936 creating build/lib/multiqc/modules/samblaster 2024-05-15T15:29:10,937 copying multiqc/modules/samblaster/__init__.py -> build/lib/multiqc/modules/samblaster 2024-05-15T15:29:10,939 copying multiqc/modules/samblaster/samblaster.py -> build/lib/multiqc/modules/samblaster 2024-05-15T15:29:10,941 creating build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,942 copying multiqc/modules/samtools/__init__.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,943 copying multiqc/modules/samtools/coverage.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,946 copying multiqc/modules/samtools/flagstat.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,948 copying multiqc/modules/samtools/idxstats.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,951 copying multiqc/modules/samtools/markdup.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,953 copying multiqc/modules/samtools/rmdup.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,955 copying multiqc/modules/samtools/samtools.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,958 copying multiqc/modules/samtools/stats.py -> build/lib/multiqc/modules/samtools 2024-05-15T15:29:10,960 creating build/lib/multiqc/modules/sargasso 2024-05-15T15:29:10,961 copying multiqc/modules/sargasso/__init__.py -> build/lib/multiqc/modules/sargasso 2024-05-15T15:29:10,963 copying multiqc/modules/sargasso/sargasso.py -> build/lib/multiqc/modules/sargasso 2024-05-15T15:29:10,965 creating build/lib/multiqc/modules/seqera_cli 2024-05-15T15:29:10,966 copying multiqc/modules/seqera_cli/__init__.py -> build/lib/multiqc/modules/seqera_cli 2024-05-15T15:29:10,968 copying multiqc/modules/seqera_cli/seqera_cli.py -> build/lib/multiqc/modules/seqera_cli 2024-05-15T15:29:10,971 creating build/lib/multiqc/modules/sequali 2024-05-15T15:29:10,971 copying multiqc/modules/sequali/__init__.py -> build/lib/multiqc/modules/sequali 2024-05-15T15:29:10,974 copying multiqc/modules/sequali/sequali.py -> build/lib/multiqc/modules/sequali 2024-05-15T15:29:10,976 creating build/lib/multiqc/modules/seqwho 2024-05-15T15:29:10,977 copying multiqc/modules/seqwho/__init__.py -> build/lib/multiqc/modules/seqwho 2024-05-15T15:29:10,979 copying multiqc/modules/seqwho/seqwho.py -> build/lib/multiqc/modules/seqwho 2024-05-15T15:29:10,982 creating build/lib/multiqc/modules/seqyclean 2024-05-15T15:29:10,983 copying multiqc/modules/seqyclean/__init__.py -> build/lib/multiqc/modules/seqyclean 2024-05-15T15:29:10,985 copying multiqc/modules/seqyclean/seqyclean.py -> build/lib/multiqc/modules/seqyclean 2024-05-15T15:29:10,987 creating build/lib/multiqc/modules/sexdeterrmine 2024-05-15T15:29:10,988 copying multiqc/modules/sexdeterrmine/__init__.py -> build/lib/multiqc/modules/sexdeterrmine 2024-05-15T15:29:10,990 copying multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/lib/multiqc/modules/sexdeterrmine 2024-05-15T15:29:10,993 creating build/lib/multiqc/modules/sickle 2024-05-15T15:29:10,994 copying multiqc/modules/sickle/__init__.py -> build/lib/multiqc/modules/sickle 2024-05-15T15:29:10,996 copying multiqc/modules/sickle/sickle.py -> build/lib/multiqc/modules/sickle 2024-05-15T15:29:10,998 creating build/lib/multiqc/modules/skewer 2024-05-15T15:29:10,999 copying multiqc/modules/skewer/__init__.py -> build/lib/multiqc/modules/skewer 2024-05-15T15:29:11,001 copying multiqc/modules/skewer/skewer.py -> build/lib/multiqc/modules/skewer 2024-05-15T15:29:11,004 creating build/lib/multiqc/modules/slamdunk 2024-05-15T15:29:11,005 copying multiqc/modules/slamdunk/__init__.py -> build/lib/multiqc/modules/slamdunk 2024-05-15T15:29:11,007 copying multiqc/modules/slamdunk/slamdunk.py -> build/lib/multiqc/modules/slamdunk 2024-05-15T15:29:11,009 creating build/lib/multiqc/modules/snippy 2024-05-15T15:29:11,010 copying multiqc/modules/snippy/__init__.py -> build/lib/multiqc/modules/snippy 2024-05-15T15:29:11,012 copying multiqc/modules/snippy/snippy.py -> build/lib/multiqc/modules/snippy 2024-05-15T15:29:11,015 creating build/lib/multiqc/modules/snpeff 2024-05-15T15:29:11,016 copying multiqc/modules/snpeff/__init__.py -> build/lib/multiqc/modules/snpeff 2024-05-15T15:29:11,018 copying multiqc/modules/snpeff/snpeff.py -> build/lib/multiqc/modules/snpeff 2024-05-15T15:29:11,020 creating build/lib/multiqc/modules/snpsplit 2024-05-15T15:29:11,021 copying multiqc/modules/snpsplit/__init__.py -> build/lib/multiqc/modules/snpsplit 2024-05-15T15:29:11,023 copying multiqc/modules/snpsplit/snpsplit.py -> build/lib/multiqc/modules/snpsplit 2024-05-15T15:29:11,026 creating build/lib/multiqc/modules/somalier 2024-05-15T15:29:11,027 copying multiqc/modules/somalier/__init__.py -> build/lib/multiqc/modules/somalier 2024-05-15T15:29:11,029 copying multiqc/modules/somalier/somalier.py -> build/lib/multiqc/modules/somalier 2024-05-15T15:29:11,031 creating build/lib/multiqc/modules/sortmerna 2024-05-15T15:29:11,032 copying multiqc/modules/sortmerna/__init__.py -> build/lib/multiqc/modules/sortmerna 2024-05-15T15:29:11,034 copying multiqc/modules/sortmerna/sortmerna.py -> build/lib/multiqc/modules/sortmerna 2024-05-15T15:29:11,036 creating build/lib/multiqc/modules/sourmash 2024-05-15T15:29:11,037 copying multiqc/modules/sourmash/__init__.py -> build/lib/multiqc/modules/sourmash 2024-05-15T15:29:11,039 copying multiqc/modules/sourmash/compare.py -> build/lib/multiqc/modules/sourmash 2024-05-15T15:29:11,041 copying multiqc/modules/sourmash/gather.py -> build/lib/multiqc/modules/sourmash 2024-05-15T15:29:11,044 copying multiqc/modules/sourmash/sourmash.py -> build/lib/multiqc/modules/sourmash 2024-05-15T15:29:11,046 creating build/lib/multiqc/modules/spaceranger 2024-05-15T15:29:11,046 copying multiqc/modules/spaceranger/__init__.py -> build/lib/multiqc/modules/spaceranger 2024-05-15T15:29:11,049 copying multiqc/modules/spaceranger/_utils.py -> build/lib/multiqc/modules/spaceranger 2024-05-15T15:29:11,051 copying multiqc/modules/spaceranger/count.py -> build/lib/multiqc/modules/spaceranger 2024-05-15T15:29:11,053 copying multiqc/modules/spaceranger/spaceranger.py -> build/lib/multiqc/modules/spaceranger 2024-05-15T15:29:11,055 creating build/lib/multiqc/modules/stacks 2024-05-15T15:29:11,056 copying multiqc/modules/stacks/__init__.py -> build/lib/multiqc/modules/stacks 2024-05-15T15:29:11,058 copying multiqc/modules/stacks/stacks.py -> build/lib/multiqc/modules/stacks 2024-05-15T15:29:11,061 creating build/lib/multiqc/modules/star 2024-05-15T15:29:11,061 copying multiqc/modules/star/__init__.py -> build/lib/multiqc/modules/star 2024-05-15T15:29:11,063 copying multiqc/modules/star/star.py -> build/lib/multiqc/modules/star 2024-05-15T15:29:11,066 creating build/lib/multiqc/modules/supernova 2024-05-15T15:29:11,067 copying multiqc/modules/supernova/__init__.py -> build/lib/multiqc/modules/supernova 2024-05-15T15:29:11,069 copying multiqc/modules/supernova/supernova.py -> build/lib/multiqc/modules/supernova 2024-05-15T15:29:11,072 creating build/lib/multiqc/modules/theta2 2024-05-15T15:29:11,073 copying multiqc/modules/theta2/__init__.py -> build/lib/multiqc/modules/theta2 2024-05-15T15:29:11,075 copying multiqc/modules/theta2/theta2.py -> build/lib/multiqc/modules/theta2 2024-05-15T15:29:11,077 creating build/lib/multiqc/modules/tophat 2024-05-15T15:29:11,078 copying multiqc/modules/tophat/__init__.py -> build/lib/multiqc/modules/tophat 2024-05-15T15:29:11,080 copying multiqc/modules/tophat/tophat.py -> build/lib/multiqc/modules/tophat 2024-05-15T15:29:11,082 creating build/lib/multiqc/modules/trimmomatic 2024-05-15T15:29:11,083 copying multiqc/modules/trimmomatic/__init__.py -> build/lib/multiqc/modules/trimmomatic 2024-05-15T15:29:11,085 copying multiqc/modules/trimmomatic/trimmomatic.py -> build/lib/multiqc/modules/trimmomatic 2024-05-15T15:29:11,087 creating build/lib/multiqc/modules/truvari 2024-05-15T15:29:11,088 copying multiqc/modules/truvari/__init__.py -> build/lib/multiqc/modules/truvari 2024-05-15T15:29:11,090 copying multiqc/modules/truvari/bench.py -> build/lib/multiqc/modules/truvari 2024-05-15T15:29:11,092 copying multiqc/modules/truvari/truvari.py -> build/lib/multiqc/modules/truvari 2024-05-15T15:29:11,094 creating build/lib/multiqc/modules/umitools 2024-05-15T15:29:11,095 copying multiqc/modules/umitools/__init__.py -> build/lib/multiqc/modules/umitools 2024-05-15T15:29:11,097 copying multiqc/modules/umitools/umitools.py -> build/lib/multiqc/modules/umitools 2024-05-15T15:29:11,099 creating build/lib/multiqc/modules/varscan2 2024-05-15T15:29:11,100 copying multiqc/modules/varscan2/__init__.py -> build/lib/multiqc/modules/varscan2 2024-05-15T15:29:11,102 copying multiqc/modules/varscan2/varscan2.py -> build/lib/multiqc/modules/varscan2 2024-05-15T15:29:11,104 creating build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,105 copying multiqc/modules/vcftools/__init__.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,107 copying multiqc/modules/vcftools/relatedness2.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,109 copying multiqc/modules/vcftools/tstv_by_count.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,111 copying multiqc/modules/vcftools/tstv_by_qual.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,113 copying multiqc/modules/vcftools/tstv_summary.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,115 copying multiqc/modules/vcftools/vcftools.py -> build/lib/multiqc/modules/vcftools 2024-05-15T15:29:11,117 creating build/lib/multiqc/modules/vep 2024-05-15T15:29:11,118 copying multiqc/modules/vep/__init__.py -> build/lib/multiqc/modules/vep 2024-05-15T15:29:11,120 copying multiqc/modules/vep/vep.py -> build/lib/multiqc/modules/vep 2024-05-15T15:29:11,123 creating build/lib/multiqc/modules/verifybamid 2024-05-15T15:29:11,123 copying multiqc/modules/verifybamid/__init__.py -> build/lib/multiqc/modules/verifybamid 2024-05-15T15:29:11,126 copying multiqc/modules/verifybamid/verifybamid.py -> build/lib/multiqc/modules/verifybamid 2024-05-15T15:29:11,128 creating build/lib/multiqc/modules/whatshap 2024-05-15T15:29:11,129 copying multiqc/modules/whatshap/__init__.py -> build/lib/multiqc/modules/whatshap 2024-05-15T15:29:11,131 copying multiqc/modules/whatshap/whatshap.py -> build/lib/multiqc/modules/whatshap 2024-05-15T15:29:11,134 creating build/lib/multiqc/modules/xengsort 2024-05-15T15:29:11,135 copying multiqc/modules/xengsort/__init__.py -> build/lib/multiqc/modules/xengsort 2024-05-15T15:29:11,137 copying multiqc/modules/xengsort/xengsort.py -> build/lib/multiqc/modules/xengsort 2024-05-15T15:29:11,139 creating build/lib/multiqc/modules/xenome 2024-05-15T15:29:11,140 copying multiqc/modules/xenome/__init__.py -> build/lib/multiqc/modules/xenome 2024-05-15T15:29:11,142 copying multiqc/modules/xenome/xenome.py -> build/lib/multiqc/modules/xenome 2024-05-15T15:29:11,145 creating build/lib/multiqc/plots 2024-05-15T15:29:11,146 copying multiqc/plots/__init__.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,148 copying multiqc/plots/bargraph.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,150 copying multiqc/plots/box.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,152 copying multiqc/plots/heatmap.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,154 copying multiqc/plots/linegraph.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,156 copying multiqc/plots/scatter.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,159 copying multiqc/plots/table.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,161 copying multiqc/plots/table_object.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,164 copying multiqc/plots/violin.py -> build/lib/multiqc/plots 2024-05-15T15:29:11,166 creating build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,167 copying multiqc/plots/plotly/__init__.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,170 copying multiqc/plots/plotly/bar.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,172 copying multiqc/plots/plotly/box.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,175 copying multiqc/plots/plotly/heatmap.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,177 copying multiqc/plots/plotly/line.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,180 copying multiqc/plots/plotly/plot.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,183 copying multiqc/plots/plotly/scatter.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,186 copying multiqc/plots/plotly/table.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,189 copying multiqc/plots/plotly/violin.py -> build/lib/multiqc/plots/plotly 2024-05-15T15:29:11,192 creating build/lib/multiqc/templates 2024-05-15T15:29:11,193 copying multiqc/templates/__init__.py -> build/lib/multiqc/templates 2024-05-15T15:29:11,195 creating build/lib/multiqc/templates/default 2024-05-15T15:29:11,196 copying multiqc/templates/default/__init__.py -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,198 copying multiqc/templates/default/base.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,200 copying multiqc/templates/default/content.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,202 copying multiqc/templates/default/foot.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,205 copying multiqc/templates/default/footer.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,207 copying multiqc/templates/default/general_stats.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,209 copying multiqc/templates/default/head.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,211 copying multiqc/templates/default/header.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,214 copying multiqc/templates/default/includes.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,217 copying multiqc/templates/default/nav.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,219 copying multiqc/templates/default/toolbox.html -> build/lib/multiqc/templates/default 2024-05-15T15:29:11,221 creating build/lib/multiqc/templates/default/assets 2024-05-15T15:29:11,222 creating build/lib/multiqc/templates/default/assets/css 2024-05-15T15:29:11,223 copying multiqc/templates/default/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/default/assets/css 2024-05-15T15:29:11,228 copying multiqc/templates/default/assets/css/default_multiqc.css -> build/lib/multiqc/templates/default/assets/css 2024-05-15T15:29:11,231 copying multiqc/templates/default/assets/css/jquery.toast.css -> build/lib/multiqc/templates/default/assets/css 2024-05-15T15:29:11,234 creating build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,235 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,238 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,243 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,247 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,250 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/lib/multiqc/templates/default/assets/fonts 2024-05-15T15:29:11,252 creating build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,253 copying multiqc/templates/default/assets/img/MultiQC_logo.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,257 copying multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,259 copying multiqc/templates/default/assets/img/favicon-16x16.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,262 copying multiqc/templates/default/assets/img/favicon-32x32.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,264 copying multiqc/templates/default/assets/img/favicon-96x96.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,267 copying multiqc/templates/default/assets/img/seqera_logo.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,269 copying multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/lib/multiqc/templates/default/assets/img 2024-05-15T15:29:11,270 creating build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,271 copying multiqc/templates/default/assets/js/decompress.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,273 copying multiqc/templates/default/assets/js/flat.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,276 copying multiqc/templates/default/assets/js/multiqc.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,278 copying multiqc/templates/default/assets/js/plotting.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,280 copying multiqc/templates/default/assets/js/render.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,282 copying multiqc/templates/default/assets/js/tables.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,285 copying multiqc/templates/default/assets/js/toolbox.js -> build/lib/multiqc/templates/default/assets/js 2024-05-15T15:29:11,288 creating build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,289 copying multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,291 copying multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,294 copying multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,297 copying multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,300 copying multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,303 copying multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,306 copying multiqc/templates/default/assets/js/packages/jszip.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,310 copying multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,313 copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,441 copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,495 creating build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,497 copying multiqc/templates/default/assets/js/plots/bar.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,499 copying multiqc/templates/default/assets/js/plots/box.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,501 copying multiqc/templates/default/assets/js/plots/heatmap.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,503 copying multiqc/templates/default/assets/js/plots/line.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,505 copying multiqc/templates/default/assets/js/plots/scatter.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,507 copying multiqc/templates/default/assets/js/plots/violin.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:11,510 creating build/lib/multiqc/templates/gathered 2024-05-15T15:29:11,511 copying multiqc/templates/gathered/__init__.py -> build/lib/multiqc/templates/gathered 2024-05-15T15:29:11,513 copying multiqc/templates/gathered/content.html -> build/lib/multiqc/templates/gathered 2024-05-15T15:29:11,515 copying multiqc/templates/gathered/nav.html -> build/lib/multiqc/templates/gathered 2024-05-15T15:29:11,517 creating build/lib/multiqc/templates/geo 2024-05-15T15:29:11,517 copying multiqc/templates/geo/__init__.py -> build/lib/multiqc/templates/geo 2024-05-15T15:29:11,519 copying multiqc/templates/geo/includes.html -> build/lib/multiqc/templates/geo 2024-05-15T15:29:11,522 creating build/lib/multiqc/templates/geo/assets 2024-05-15T15:29:11,522 creating build/lib/multiqc/templates/geo/assets/css 2024-05-15T15:29:11,523 copying multiqc/templates/geo/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/geo/assets/css 2024-05-15T15:29:11,528 creating build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,529 copying multiqc/templates/geo/assets/img/emailme.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,531 copying multiqc/templates/geo/assets/img/flames.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,534 copying multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,537 copying multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,540 copying multiqc/templates/geo/assets/img/hot.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,543 copying multiqc/templates/geo/assets/img/mchammer.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,546 copying multiqc/templates/geo/assets/img/microfab.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,549 copying multiqc/templates/geo/assets/img/new.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,551 copying multiqc/templates/geo/assets/img/new2.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,554 copying multiqc/templates/geo/assets/img/progress.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,556 copying multiqc/templates/geo/assets/img/rainbow.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,558 copying multiqc/templates/geo/assets/img/stars.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,561 creating build/lib/multiqc/templates/sections 2024-05-15T15:29:11,562 copying multiqc/templates/sections/__init__.py -> build/lib/multiqc/templates/sections 2024-05-15T15:29:11,564 copying multiqc/templates/sections/content.html -> build/lib/multiqc/templates/sections 2024-05-15T15:29:11,566 creating build/lib/multiqc/templates/simple 2024-05-15T15:29:11,567 copying multiqc/templates/simple/__init__.py -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,569 copying multiqc/templates/simple/foot.html -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,571 copying multiqc/templates/simple/header.html -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,573 copying multiqc/templates/simple/includes.html -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,576 copying multiqc/templates/simple/nav.html -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,577 copying multiqc/templates/simple/toolbox.html -> build/lib/multiqc/templates/simple 2024-05-15T15:29:11,579 creating build/lib/multiqc/utils 2024-05-15T15:29:11,580 copying multiqc/utils/__init__.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,582 copying multiqc/utils/config.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,584 copying multiqc/utils/megaqc.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,586 copying multiqc/utils/mqc_colour.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,588 copying multiqc/utils/report.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,590 copying multiqc/utils/util_functions.py -> build/lib/multiqc/utils 2024-05-15T15:29:11,600 installing to build/bdist.linux-armv7l/wheel 2024-05-15T15:29:11,601 running install 2024-05-15T15:29:11,625 running install_lib 2024-05-15T15:29:11,629 creating build/bdist.linux-armv7l 2024-05-15T15:29:11,630 creating build/bdist.linux-armv7l/wheel 2024-05-15T15:29:11,632 creating build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,633 copying build/lib/multiqc/report.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,636 creating build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,637 copying build/lib/multiqc/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,639 copying build/lib/multiqc/plots/bargraph.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,642 creating build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,643 copying build/lib/multiqc/plots/plotly/heatmap.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,646 copying build/lib/multiqc/plots/plotly/line.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,648 copying build/lib/multiqc/plots/plotly/scatter.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,651 copying build/lib/multiqc/plots/plotly/plot.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,653 copying build/lib/multiqc/plots/plotly/bar.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,656 copying build/lib/multiqc/plots/plotly/table.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,659 copying build/lib/multiqc/plots/plotly/violin.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,661 copying build/lib/multiqc/plots/plotly/box.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,664 copying build/lib/multiqc/plots/plotly/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-15T15:29:11,666 copying build/lib/multiqc/plots/scatter.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,668 copying build/lib/multiqc/plots/table.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,670 copying build/lib/multiqc/plots/violin.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,672 copying build/lib/multiqc/plots/table_object.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,674 copying build/lib/multiqc/plots/box.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,676 copying build/lib/multiqc/plots/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,678 copying build/lib/multiqc/plots/linegraph.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-15T15:29:11,680 copying build/lib/multiqc/base_module.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,683 copying build/lib/multiqc/interactive.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,685 copying build/lib/multiqc/__main__.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,687 copying build/lib/multiqc/search_patterns.yaml -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,690 copying build/lib/multiqc/config.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:11,693 creating build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,694 copying build/lib/multiqc/core/exec_modules.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,696 copying build/lib/multiqc/core/init_log.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,698 copying build/lib/multiqc/core/software_versions.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,701 copying build/lib/multiqc/core/write_results.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,703 copying build/lib/multiqc/core/exceptions.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,705 copying build/lib/multiqc/core/version_check.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,707 copying build/lib/multiqc/core/file_search.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,709 copying build/lib/multiqc/core/plugin_hooks.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,710 copying build/lib/multiqc/core/update_config.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,713 copying build/lib/multiqc/core/strict_helpers.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-15T15:29:11,715 creating build/bdist.linux-armv7l/wheel/multiqc/templates 2024-05-15T15:29:11,716 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-15T15:29:11,717 copying build/lib/multiqc/templates/geo/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-15T15:29:11,720 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets 2024-05-15T15:29:11,721 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/css 2024-05-15T15:29:11,722 copying build/lib/multiqc/templates/geo/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/css 2024-05-15T15:29:11,727 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,728 copying build/lib/multiqc/templates/geo/assets/img/mchammer.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,732 copying build/lib/multiqc/templates/geo/assets/img/flames.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,736 copying build/lib/multiqc/templates/geo/assets/img/hot.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,738 copying build/lib/multiqc/templates/geo/assets/img/new2.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,741 copying build/lib/multiqc/templates/geo/assets/img/progress.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,742 copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,745 copying build/lib/multiqc/templates/geo/assets/img/new.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,747 copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,749 copying build/lib/multiqc/templates/geo/assets/img/microfab.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,752 copying build/lib/multiqc/templates/geo/assets/img/stars.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,754 copying build/lib/multiqc/templates/geo/assets/img/rainbow.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,756 copying build/lib/multiqc/templates/geo/assets/img/emailme.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-15T15:29:11,758 copying build/lib/multiqc/templates/geo/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-15T15:29:11,760 creating build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-15T15:29:11,761 copying build/lib/multiqc/templates/sections/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-15T15:29:11,763 copying build/lib/multiqc/templates/sections/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-15T15:29:11,765 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,766 copying build/lib/multiqc/templates/default/head.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,768 copying build/lib/multiqc/templates/default/toolbox.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,770 copying build/lib/multiqc/templates/default/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,772 copying build/lib/multiqc/templates/default/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,774 copying build/lib/multiqc/templates/default/header.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,777 copying build/lib/multiqc/templates/default/general_stats.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,778 copying build/lib/multiqc/templates/default/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,780 copying build/lib/multiqc/templates/default/foot.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,782 copying build/lib/multiqc/templates/default/footer.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,784 copying build/lib/multiqc/templates/default/base.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:11,786 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets 2024-05-15T15:29:11,788 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-15T15:29:11,789 copying build/lib/multiqc/templates/default/assets/css/default_multiqc.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-15T15:29:11,791 copying build/lib/multiqc/templates/default/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-15T15:29:11,795 copying build/lib/multiqc/templates/default/assets/css/jquery.toast.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-15T15:29:11,798 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:11,799 copying build/lib/multiqc/templates/default/assets/js/plotting.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:11,802 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,803 copying build/lib/multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,810 copying build/lib/multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,812 copying build/lib/multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,815 copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,870 copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:11,999 copying build/lib/multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:12,002 copying build/lib/multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:12,004 copying build/lib/multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:12,007 copying build/lib/multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:12,010 copying build/lib/multiqc/templates/default/assets/js/packages/jszip.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-15T15:29:12,013 copying build/lib/multiqc/templates/default/assets/js/toolbox.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,017 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,017 copying build/lib/multiqc/templates/default/assets/js/plots/scatter.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,019 copying build/lib/multiqc/templates/default/assets/js/plots/violin.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,022 copying build/lib/multiqc/templates/default/assets/js/plots/line.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,023 copying build/lib/multiqc/templates/default/assets/js/plots/box.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,026 copying build/lib/multiqc/templates/default/assets/js/plots/heatmap.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,028 copying build/lib/multiqc/templates/default/assets/js/plots/bar.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-15T15:29:12,029 copying build/lib/multiqc/templates/default/assets/js/tables.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,032 copying build/lib/multiqc/templates/default/assets/js/decompress.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,034 copying build/lib/multiqc/templates/default/assets/js/flat.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,036 copying build/lib/multiqc/templates/default/assets/js/multiqc.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,038 copying build/lib/multiqc/templates/default/assets/js/render.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-15T15:29:12,040 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,041 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,044 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,047 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,051 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,054 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-15T15:29:12,057 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,058 copying build/lib/multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,060 copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,062 copying build/lib/multiqc/templates/default/assets/img/favicon-16x16.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,064 copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,066 copying build/lib/multiqc/templates/default/assets/img/favicon-32x32.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,068 copying build/lib/multiqc/templates/default/assets/img/favicon-96x96.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,071 copying build/lib/multiqc/templates/default/assets/img/seqera_logo.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-15T15:29:12,073 copying build/lib/multiqc/templates/default/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-15T15:29:12,075 creating build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-15T15:29:12,076 copying build/lib/multiqc/templates/gathered/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-15T15:29:12,078 copying build/lib/multiqc/templates/gathered/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-15T15:29:12,079 copying build/lib/multiqc/templates/gathered/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-15T15:29:12,081 copying build/lib/multiqc/templates/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates 2024-05-15T15:29:12,083 creating build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,084 copying build/lib/multiqc/templates/simple/toolbox.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,087 copying build/lib/multiqc/templates/simple/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,089 copying build/lib/multiqc/templates/simple/header.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,090 copying build/lib/multiqc/templates/simple/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,092 copying build/lib/multiqc/templates/simple/foot.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,094 copying build/lib/multiqc/templates/simple/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-15T15:29:12,098 creating build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-15T15:29:12,100 creating build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:12,101 copying build/lib/multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:12,103 copying build/lib/multiqc/modules/multivcfanalyzer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-15T15:29:12,106 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-15T15:29:12,107 copying build/lib/multiqc/modules/ivar/ivar.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-15T15:29:12,109 copying build/lib/multiqc/modules/ivar/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-15T15:29:12,111 creating build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-15T15:29:12,112 copying build/lib/multiqc/modules/afterqc/afterqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-15T15:29:12,114 copying build/lib/multiqc/modules/afterqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-15T15:29:12,117 creating build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-15T15:29:12,118 copying build/lib/multiqc/modules/spaceranger/spaceranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-15T15:29:12,120 copying build/lib/multiqc/modules/spaceranger/_utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-15T15:29:12,122 copying build/lib/multiqc/modules/spaceranger/count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-15T15:29:12,125 copying build/lib/multiqc/modules/spaceranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-15T15:29:12,127 creating build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-15T15:29:12,128 copying build/lib/multiqc/modules/umitools/umitools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-15T15:29:12,130 copying build/lib/multiqc/modules/umitools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-15T15:29:12,132 creating build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-15T15:29:12,133 copying build/lib/multiqc/modules/isoseq/isoseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-15T15:29:12,136 copying build/lib/multiqc/modules/isoseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-15T15:29:12,138 creating build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-15T15:29:12,139 copying build/lib/multiqc/modules/whatshap/whatshap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-15T15:29:12,142 copying build/lib/multiqc/modules/whatshap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-15T15:29:12,144 creating build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-15T15:29:12,145 copying build/lib/multiqc/modules/optitype/optitype.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-15T15:29:12,147 copying build/lib/multiqc/modules/optitype/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-15T15:29:12,149 creating build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-15T15:29:12,150 copying build/lib/multiqc/modules/salmon/salmon.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-15T15:29:12,152 copying build/lib/multiqc/modules/salmon/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-15T15:29:12,154 creating build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-15T15:29:12,155 copying build/lib/multiqc/modules/checkqc/checkqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-15T15:29:12,158 copying build/lib/multiqc/modules/checkqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-15T15:29:12,160 creating build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-15T15:29:12,161 copying build/lib/multiqc/modules/somalier/somalier.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-15T15:29:12,165 copying build/lib/multiqc/modules/somalier/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-15T15:29:12,167 creating build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-15T15:29:12,168 copying build/lib/multiqc/modules/jcvi/jcvi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-15T15:29:12,170 copying build/lib/multiqc/modules/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-15T15:29:12,173 creating build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-15T15:29:12,174 copying build/lib/multiqc/modules/verifybamid/verifybamid.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-15T15:29:12,176 copying build/lib/multiqc/modules/verifybamid/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-15T15:29:12,179 creating build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-15T15:29:12,180 copying build/lib/multiqc/modules/clipandmerge/clipandmerge.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-15T15:29:12,182 copying build/lib/multiqc/modules/clipandmerge/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-15T15:29:12,184 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-15T15:29:12,185 copying build/lib/multiqc/modules/hops/hops.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-15T15:29:12,187 copying build/lib/multiqc/modules/hops/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-15T15:29:12,189 creating build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-15T15:29:12,190 copying build/lib/multiqc/modules/preseq/preseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-15T15:29:12,193 copying build/lib/multiqc/modules/preseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-15T15:29:12,195 creating build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-15T15:29:12,196 copying build/lib/multiqc/modules/featureCounts/feature_counts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-15T15:29:12,198 copying build/lib/multiqc/modules/featureCounts/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-15T15:29:12,200 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-15T15:29:12,201 copying build/lib/multiqc/modules/biobloomtools/biobloomtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-15T15:29:12,203 copying build/lib/multiqc/modules/biobloomtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-15T15:29:12,205 creating build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-15T15:29:12,206 copying build/lib/multiqc/modules/malt/malt.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-15T15:29:12,208 copying build/lib/multiqc/modules/malt/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-15T15:29:12,211 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-15T15:29:12,211 copying build/lib/multiqc/modules/nonpareil/nonpareil.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-15T15:29:12,214 copying build/lib/multiqc/modules/nonpareil/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-15T15:29:12,216 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,217 copying build/lib/multiqc/modules/dragen_fastqc/read_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,219 copying build/lib/multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,221 copying build/lib/multiqc/modules/dragen_fastqc/gc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,224 copying build/lib/multiqc/modules/dragen_fastqc/content_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,226 copying build/lib/multiqc/modules/dragen_fastqc/util.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,228 copying build/lib/multiqc/modules/dragen_fastqc/base_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,231 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets 2024-05-15T15:29:12,232 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets/js 2024-05-15T15:29:12,233 copying build/lib/multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets/js 2024-05-15T15:29:12,236 copying build/lib/multiqc/modules/dragen_fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-15T15:29:12,238 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-15T15:29:12,240 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:12,241 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:12,243 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:12,245 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:12,246 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-15T15:29:12,248 copying build/lib/multiqc/modules/fastqc/fastqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-15T15:29:12,251 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets 2024-05-15T15:29:12,253 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/css 2024-05-15T15:29:12,254 copying build/lib/multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/css 2024-05-15T15:29:12,256 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/js 2024-05-15T15:29:12,257 copying build/lib/multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/js 2024-05-15T15:29:12,260 copying build/lib/multiqc/modules/fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-15T15:29:12,262 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-15T15:29:12,263 copying build/lib/multiqc/modules/sargasso/sargasso.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-15T15:29:12,265 copying build/lib/multiqc/modules/sargasso/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-15T15:29:12,267 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-15T15:29:12,268 copying build/lib/multiqc/modules/snpsplit/snpsplit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-15T15:29:12,271 copying build/lib/multiqc/modules/snpsplit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-15T15:29:12,273 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-15T15:29:12,274 copying build/lib/multiqc/modules/bamdst/bamdst.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-15T15:29:12,276 copying build/lib/multiqc/modules/bamdst/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-15T15:29:12,278 creating build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-15T15:29:12,279 copying build/lib/multiqc/modules/damageprofiler/damageprofiler.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-15T15:29:12,282 copying build/lib/multiqc/modules/damageprofiler/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-15T15:29:12,284 creating build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,285 copying build/lib/multiqc/modules/cellranger/vdj.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,287 copying build/lib/multiqc/modules/cellranger/cellranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,290 copying build/lib/multiqc/modules/cellranger/count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,292 copying build/lib/multiqc/modules/cellranger/utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,294 copying build/lib/multiqc/modules/cellranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-15T15:29:12,296 creating build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-15T15:29:12,297 copying build/lib/multiqc/modules/happy/happy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-15T15:29:12,299 copying build/lib/multiqc/modules/happy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-15T15:29:12,302 creating build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-15T15:29:12,302 copying build/lib/multiqc/modules/motus/motus.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-15T15:29:12,305 copying build/lib/multiqc/modules/motus/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-15T15:29:12,307 creating build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-15T15:29:12,307 copying build/lib/multiqc/modules/clusterflow/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-15T15:29:12,309 copying build/lib/multiqc/modules/clusterflow/clusterflow.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-15T15:29:12,312 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-15T15:29:12,313 copying build/lib/multiqc/modules/sourmash/gather.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-15T15:29:12,315 copying build/lib/multiqc/modules/sourmash/compare.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-15T15:29:12,317 copying build/lib/multiqc/modules/sourmash/sourmash.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-15T15:29:12,319 copying build/lib/multiqc/modules/sourmash/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-15T15:29:12,321 creating build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-15T15:29:12,322 copying build/lib/multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-15T15:29:12,324 copying build/lib/multiqc/modules/goleft_indexcov/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-15T15:29:12,326 creating build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-15T15:29:12,327 copying build/lib/multiqc/modules/theta2/theta2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-15T15:29:12,329 copying build/lib/multiqc/modules/theta2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-15T15:29:12,331 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-15T15:29:12,332 copying build/lib/multiqc/modules/kat/kat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-15T15:29:12,334 copying build/lib/multiqc/modules/kat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-15T15:29:12,336 creating build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-15T15:29:12,337 copying build/lib/multiqc/modules/jellyfish/jellyfish.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-15T15:29:12,340 copying build/lib/multiqc/modules/jellyfish/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-15T15:29:12,342 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-15T15:29:12,343 copying build/lib/multiqc/modules/pycoqc/pycoqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-15T15:29:12,346 copying build/lib/multiqc/modules/pycoqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-15T15:29:12,347 copying build/lib/multiqc/modules/software_versions.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-15T15:29:12,350 creating build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-15T15:29:12,351 copying build/lib/multiqc/modules/skewer/skewer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-15T15:29:12,353 copying build/lib/multiqc/modules/skewer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-15T15:29:12,355 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-15T15:29:12,356 copying build/lib/multiqc/modules/bakta/bakta.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-15T15:29:12,359 copying build/lib/multiqc/modules/bakta/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-15T15:29:12,361 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-15T15:29:12,362 copying build/lib/multiqc/modules/bowtie2/bowtie2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-15T15:29:12,364 copying build/lib/multiqc/modules/bowtie2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-15T15:29:12,366 creating build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-15T15:29:12,367 copying build/lib/multiqc/modules/filtlong/filtlong.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-15T15:29:12,369 copying build/lib/multiqc/modules/filtlong/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-15T15:29:12,371 creating build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-15T15:29:12,372 copying build/lib/multiqc/modules/xenome/xenome.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-15T15:29:12,374 copying build/lib/multiqc/modules/xenome/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-15T15:29:12,376 creating build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-15T15:29:12,377 copying build/lib/multiqc/modules/varscan2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-15T15:29:12,379 copying build/lib/multiqc/modules/varscan2/varscan2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-15T15:29:12,381 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-15T15:29:12,382 copying build/lib/multiqc/modules/bclconvert/bclconvert.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-15T15:29:12,385 copying build/lib/multiqc/modules/bclconvert/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-15T15:29:12,387 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-15T15:29:12,388 copying build/lib/multiqc/modules/fastq_screen/fastq_screen.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-15T15:29:12,390 copying build/lib/multiqc/modules/fastq_screen/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-15T15:29:12,392 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-15T15:29:12,393 copying build/lib/multiqc/modules/bbduk/bbduk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-15T15:29:12,395 copying build/lib/multiqc/modules/bbduk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-15T15:29:12,398 creating build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-15T15:29:12,399 copying build/lib/multiqc/modules/peddy/peddy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-15T15:29:12,401 copying build/lib/multiqc/modules/peddy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-15T15:29:12,403 creating build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-15T15:29:12,404 copying build/lib/multiqc/modules/longranger/longranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-15T15:29:12,407 copying build/lib/multiqc/modules/longranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-15T15:29:12,409 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-15T15:29:12,410 copying build/lib/multiqc/modules/sexdeterrmine/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-15T15:29:12,412 copying build/lib/multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-15T15:29:12,415 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-15T15:29:12,416 copying build/lib/multiqc/modules/pbmarkdup/pbmarkdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-15T15:29:12,418 copying build/lib/multiqc/modules/pbmarkdup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-15T15:29:12,420 creating build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-15T15:29:12,421 copying build/lib/multiqc/modules/disambiguate/disambiguate.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-15T15:29:12,423 copying build/lib/multiqc/modules/disambiguate/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-15T15:29:12,425 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-15T15:29:12,425 copying build/lib/multiqc/modules/rna_seqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-15T15:29:12,427 copying build/lib/multiqc/modules/rna_seqc/rna_seqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-15T15:29:12,430 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-15T15:29:12,431 copying build/lib/multiqc/modules/seqwho/seqwho.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-15T15:29:12,433 copying build/lib/multiqc/modules/seqwho/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-15T15:29:12,435 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,436 copying build/lib/multiqc/modules/rseqc/read_gc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,438 copying build/lib/multiqc/modules/rseqc/bam_stat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,440 copying build/lib/multiqc/modules/rseqc/rseqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,442 copying build/lib/multiqc/modules/rseqc/inner_distance.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,444 copying build/lib/multiqc/modules/rseqc/tin.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,446 copying build/lib/multiqc/modules/rseqc/junction_saturation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,448 copying build/lib/multiqc/modules/rseqc/junction_annotation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,450 copying build/lib/multiqc/modules/rseqc/read_distribution.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,452 copying build/lib/multiqc/modules/rseqc/read_duplication.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,454 copying build/lib/multiqc/modules/rseqc/infer_experiment.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,456 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets 2024-05-15T15:29:12,457 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets/js 2024-05-15T15:29:12,458 copying build/lib/multiqc/modules/rseqc/assets/js/multiqc_rseqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets/js 2024-05-15T15:29:12,460 copying build/lib/multiqc/modules/rseqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,462 copying build/lib/multiqc/modules/rseqc/gene_body_coverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-15T15:29:12,464 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-15T15:29:12,465 copying build/lib/multiqc/modules/fastp/fastp.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-15T15:29:12,468 copying build/lib/multiqc/modules/fastp/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-15T15:29:12,470 creating build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-15T15:29:12,471 copying build/lib/multiqc/modules/stacks/stacks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-15T15:29:12,474 copying build/lib/multiqc/modules/stacks/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-15T15:29:12,476 creating build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-15T15:29:12,477 copying build/lib/multiqc/modules/freyja/freyja.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-15T15:29:12,479 copying build/lib/multiqc/modules/freyja/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-15T15:29:12,481 creating build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-15T15:29:12,482 copying build/lib/multiqc/modules/methylqa/methylqa.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-15T15:29:12,484 copying build/lib/multiqc/modules/methylqa/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-15T15:29:12,486 creating build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,487 copying build/lib/multiqc/modules/samtools/markdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,489 copying build/lib/multiqc/modules/samtools/idxstats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,491 copying build/lib/multiqc/modules/samtools/rmdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,493 copying build/lib/multiqc/modules/samtools/coverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,496 copying build/lib/multiqc/modules/samtools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,498 copying build/lib/multiqc/modules/samtools/flagstat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,500 copying build/lib/multiqc/modules/samtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,502 copying build/lib/multiqc/modules/samtools/samtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-15T15:29:12,504 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-15T15:29:12,505 copying build/lib/multiqc/modules/gffcompare/gffcompare.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-15T15:29:12,508 copying build/lib/multiqc/modules/gffcompare/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-15T15:29:12,510 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-15T15:29:12,511 copying build/lib/multiqc/modules/nanostat/nanostat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-15T15:29:12,513 copying build/lib/multiqc/modules/nanostat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-15T15:29:12,515 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-15T15:29:12,516 copying build/lib/multiqc/modules/seqyclean/seqyclean.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-15T15:29:12,518 copying build/lib/multiqc/modules/seqyclean/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-15T15:29:12,521 creating build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-15T15:29:12,522 copying build/lib/multiqc/modules/cutadapt/cutadapt.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-15T15:29:12,524 copying build/lib/multiqc/modules/cutadapt/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-15T15:29:12,526 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-15T15:29:12,527 copying build/lib/multiqc/modules/hifiasm/hifiasm.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-15T15:29:12,529 copying build/lib/multiqc/modules/hifiasm/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-15T15:29:12,532 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-15T15:29:12,533 copying build/lib/multiqc/modules/ccs/ccs.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-15T15:29:12,535 copying build/lib/multiqc/modules/ccs/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-15T15:29:12,537 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-15T15:29:12,538 copying build/lib/multiqc/modules/mosdepth/mosdepth.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-15T15:29:12,541 copying build/lib/multiqc/modules/mosdepth/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-15T15:29:12,543 creating build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-15T15:29:12,544 copying build/lib/multiqc/modules/diamond/diamond.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-15T15:29:12,546 copying build/lib/multiqc/modules/diamond/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-15T15:29:12,548 creating build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-15T15:29:12,549 copying build/lib/multiqc/modules/anglerfish/anglerfish.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-15T15:29:12,551 copying build/lib/multiqc/modules/anglerfish/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-15T15:29:12,554 creating build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-15T15:29:12,555 copying build/lib/multiqc/modules/odgi/odgi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-15T15:29:12,557 copying build/lib/multiqc/modules/odgi/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-15T15:29:12,559 creating build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-15T15:29:12,560 copying build/lib/multiqc/modules/macs2/macs2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-15T15:29:12,563 copying build/lib/multiqc/modules/macs2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-15T15:29:12,565 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-15T15:29:12,566 copying build/lib/multiqc/modules/qc3C/qc3C.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-15T15:29:12,569 copying build/lib/multiqc/modules/qc3C/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-15T15:29:12,571 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-15T15:29:12,572 copying build/lib/multiqc/modules/nextclade/nextclade.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-15T15:29:12,574 copying build/lib/multiqc/modules/nextclade/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-15T15:29:12,576 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,577 copying build/lib/multiqc/modules/bbmap/plot_qhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,579 copying build/lib/multiqc/modules/bbmap/plot_mhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,581 copying build/lib/multiqc/modules/bbmap/bbmap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,583 copying build/lib/multiqc/modules/bbmap/plot_basic_hist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,585 copying build/lib/multiqc/modules/bbmap/plot_aqhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,587 copying build/lib/multiqc/modules/bbmap/plot_bhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,589 copying build/lib/multiqc/modules/bbmap/bbmap_filetypes.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,591 copying build/lib/multiqc/modules/bbmap/plot_ihist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,593 copying build/lib/multiqc/modules/bbmap/plot_covhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,595 copying build/lib/multiqc/modules/bbmap/plot_bqhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,597 copying build/lib/multiqc/modules/bbmap/plot_qchist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,599 copying build/lib/multiqc/modules/bbmap/plot_qahist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,600 copying build/lib/multiqc/modules/bbmap/plot_idhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,602 copying build/lib/multiqc/modules/bbmap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,604 copying build/lib/multiqc/modules/bbmap/plot_indelhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-15T15:29:12,606 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-15T15:29:12,606 copying build/lib/multiqc/modules/bismark/bismark.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-15T15:29:12,609 copying build/lib/multiqc/modules/bismark/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-15T15:29:12,611 creating build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-15T15:29:12,612 copying build/lib/multiqc/modules/custom_content/custom_content.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-15T15:29:12,615 copying build/lib/multiqc/modules/custom_content/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-15T15:29:12,617 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-15T15:29:12,618 copying build/lib/multiqc/modules/bowtie1/bowtie1.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-15T15:29:12,620 copying build/lib/multiqc/modules/bowtie1/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-15T15:29:12,622 creating build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-15T15:29:12,623 copying build/lib/multiqc/modules/purple/purple.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-15T15:29:12,626 copying build/lib/multiqc/modules/purple/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-15T15:29:12,628 creating build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-15T15:29:12,629 copying build/lib/multiqc/modules/minionqc/minionqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-15T15:29:12,631 copying build/lib/multiqc/modules/minionqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-15T15:29:12,633 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,634 copying build/lib/multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,637 copying build/lib/multiqc/modules/gatk/gatk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,638 copying build/lib/multiqc/modules/gatk/varianteval.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,641 copying build/lib/multiqc/modules/gatk/base_recalibrator.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,643 copying build/lib/multiqc/modules/gatk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-15T15:29:12,645 creating build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:12,646 copying build/lib/multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:12,648 copying build/lib/multiqc/modules/phantompeakqualtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-15T15:29:12,650 creating build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-15T15:29:12,651 copying build/lib/multiqc/modules/star/star.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-15T15:29:12,654 copying build/lib/multiqc/modules/star/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-15T15:29:12,656 creating build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-15T15:29:12,657 copying build/lib/multiqc/modules/tophat/tophat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-15T15:29:12,660 copying build/lib/multiqc/modules/tophat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-15T15:29:12,662 creating build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-15T15:29:12,663 copying build/lib/multiqc/modules/vep/vep.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-15T15:29:12,666 copying build/lib/multiqc/modules/vep/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-15T15:29:12,668 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-15T15:29:12,669 copying build/lib/multiqc/modules/mirtop/mirtop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-15T15:29:12,671 copying build/lib/multiqc/modules/mirtop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-15T15:29:12,673 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-15T15:29:12,674 copying build/lib/multiqc/modules/bracken/bracken.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-15T15:29:12,676 copying build/lib/multiqc/modules/bracken/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-15T15:29:12,678 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-15T15:29:12,679 copying build/lib/multiqc/modules/bcftools/bcftools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-15T15:29:12,681 copying build/lib/multiqc/modules/bcftools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-15T15:29:12,683 copying build/lib/multiqc/modules/bcftools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-15T15:29:12,686 creating build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-15T15:29:12,687 copying build/lib/multiqc/modules/flash/flash.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-15T15:29:12,689 copying build/lib/multiqc/modules/flash/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-15T15:29:12,691 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-15T15:29:12,692 copying build/lib/multiqc/modules/rsem/rsem.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-15T15:29:12,694 copying build/lib/multiqc/modules/rsem/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-15T15:29:12,697 creating build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,698 copying build/lib/multiqc/modules/humid/neighbours.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,700 copying build/lib/multiqc/modules/humid/counts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,702 copying build/lib/multiqc/modules/humid/clusters.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,703 copying build/lib/multiqc/modules/humid/humid.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,705 copying build/lib/multiqc/modules/humid/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,707 copying build/lib/multiqc/modules/humid/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-15T15:29:12,709 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-15T15:29:12,710 copying build/lib/multiqc/modules/bamtools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-15T15:29:12,713 copying build/lib/multiqc/modules/bamtools/bamtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-15T15:29:12,714 copying build/lib/multiqc/modules/bamtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-15T15:29:12,717 creating build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:12,718 copying build/lib/multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:12,720 copying build/lib/multiqc/modules/eigenstratdatabasetools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-15T15:29:12,722 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-15T15:29:12,723 copying build/lib/multiqc/modules/gopeaks/gopeaks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-15T15:29:12,726 copying build/lib/multiqc/modules/gopeaks/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-15T15:29:12,728 creating build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-15T15:29:12,729 copying build/lib/multiqc/modules/slamdunk/slamdunk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-15T15:29:12,732 copying build/lib/multiqc/modules/slamdunk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-15T15:29:12,735 creating build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-15T15:29:12,736 copying build/lib/multiqc/modules/homer/homer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-15T15:29:12,739 copying build/lib/multiqc/modules/homer/tagdirectory.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-15T15:29:12,741 copying build/lib/multiqc/modules/homer/findpeaks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-15T15:29:12,744 copying build/lib/multiqc/modules/homer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-15T15:29:12,746 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-15T15:29:12,747 copying build/lib/multiqc/modules/kaiju/kaiju.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-15T15:29:12,751 copying build/lib/multiqc/modules/kaiju/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-15T15:29:12,753 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-15T15:29:12,754 copying build/lib/multiqc/modules/pangolin/pangolin.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-15T15:29:12,757 copying build/lib/multiqc/modules/pangolin/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-15T15:29:12,760 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-15T15:29:12,761 copying build/lib/multiqc/modules/sortmerna/sortmerna.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-15T15:29:12,764 copying build/lib/multiqc/modules/sortmerna/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-15T15:29:12,766 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-15T15:29:12,767 copying build/lib/multiqc/modules/mirtrace/mirtrace.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-15T15:29:12,771 copying build/lib/multiqc/modules/mirtrace/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-15T15:29:12,773 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-15T15:29:12,774 copying build/lib/multiqc/modules/mtnucratio/mtnucratio.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-15T15:29:12,777 copying build/lib/multiqc/modules/mtnucratio/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-15T15:29:12,780 creating build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,782 copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,784 copying build/lib/multiqc/modules/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,787 copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,790 copying build/lib/multiqc/modules/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,792 copying build/lib/multiqc/modules/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,795 copying build/lib/multiqc/modules/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,798 copying build/lib/multiqc/modules/deeptools/plotCorrelation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,800 copying build/lib/multiqc/modules/deeptools/deeptools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,802 copying build/lib/multiqc/modules/deeptools/estimateReadFiltering.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,805 copying build/lib/multiqc/modules/deeptools/plotEnrichment.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,807 copying build/lib/multiqc/modules/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-15T15:29:12,810 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-15T15:29:12,811 copying build/lib/multiqc/modules/kraken/kraken.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-15T15:29:12,814 copying build/lib/multiqc/modules/kraken/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-15T15:29:12,816 creating build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-15T15:29:12,817 copying build/lib/multiqc/modules/xengsort/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-15T15:29:12,819 copying build/lib/multiqc/modules/xengsort/xengsort.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-15T15:29:12,822 creating build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-15T15:29:12,823 copying build/lib/multiqc/modules/busco/busco.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-15T15:29:12,825 copying build/lib/multiqc/modules/busco/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-15T15:29:12,827 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-15T15:29:12,828 copying build/lib/multiqc/modules/qualimap/QM_RNASeq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-15T15:29:12,830 copying build/lib/multiqc/modules/qualimap/qualimap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-15T15:29:12,832 copying build/lib/multiqc/modules/qualimap/QM_BamQC.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-15T15:29:12,835 copying build/lib/multiqc/modules/qualimap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-15T15:29:12,837 creating build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-15T15:29:12,838 copying build/lib/multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-15T15:29:12,841 copying build/lib/multiqc/modules/prinseqplusplus/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-15T15:29:12,843 creating build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,844 copying build/lib/multiqc/modules/vcftools/tstv_by_count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,846 copying build/lib/multiqc/modules/vcftools/relatedness2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,848 copying build/lib/multiqc/modules/vcftools/vcftools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,850 copying build/lib/multiqc/modules/vcftools/tstv_by_qual.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,851 copying build/lib/multiqc/modules/vcftools/tstv_summary.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,853 copying build/lib/multiqc/modules/vcftools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-15T15:29:12,855 creating build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-15T15:29:12,856 copying build/lib/multiqc/modules/prokka/prokka.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-15T15:29:12,858 copying build/lib/multiqc/modules/prokka/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-15T15:29:12,860 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-15T15:29:12,861 copying build/lib/multiqc/modules/hicexplorer/hicexplorer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-15T15:29:12,864 copying build/lib/multiqc/modules/hicexplorer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-15T15:29:12,866 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-15T15:29:12,867 copying build/lib/multiqc/modules/ngsderive/ngsderive.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-15T15:29:12,869 copying build/lib/multiqc/modules/ngsderive/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-15T15:29:12,871 copying build/lib/multiqc/modules/profile_runtime.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-15T15:29:12,873 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-15T15:29:12,874 copying build/lib/multiqc/modules/mapdamage/mapdamage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-15T15:29:12,877 copying build/lib/multiqc/modules/mapdamage/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-15T15:29:12,879 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-15T15:29:12,880 copying build/lib/multiqc/modules/snippy/snippy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-15T15:29:12,882 copying build/lib/multiqc/modules/snippy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-15T15:29:12,884 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-15T15:29:12,885 copying build/lib/multiqc/modules/hisat2/hisat2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-15T15:29:12,887 copying build/lib/multiqc/modules/hisat2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-15T15:29:12,890 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-15T15:29:12,891 copying build/lib/multiqc/modules/sambamba/markdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-15T15:29:12,893 copying build/lib/multiqc/modules/sambamba/sambamba.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-15T15:29:12,895 copying build/lib/multiqc/modules/sambamba/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-15T15:29:12,897 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-15T15:29:12,898 copying build/lib/multiqc/modules/bcl2fastq/bcl2fastq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-15T15:29:12,901 copying build/lib/multiqc/modules/bcl2fastq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-15T15:29:12,903 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-15T15:29:12,904 copying build/lib/multiqc/modules/fgbio/groupreadsbyumi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-15T15:29:12,906 copying build/lib/multiqc/modules/fgbio/fgbio.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-15T15:29:12,908 copying build/lib/multiqc/modules/fgbio/ErrorRateByReadPosition.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-15T15:29:12,910 copying build/lib/multiqc/modules/fgbio/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-15T15:29:12,913 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,913 copying build/lib/multiqc/modules/dragen/dragen_gc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,916 copying build/lib/multiqc/modules/dragen/dragen.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,918 copying build/lib/multiqc/modules/dragen/coverage_per_contig.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,920 copying build/lib/multiqc/modules/dragen/vc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,922 copying build/lib/multiqc/modules/dragen/rna_quant_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,924 copying build/lib/multiqc/modules/dragen/overall_mean_cov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,926 copying build/lib/multiqc/modules/dragen/coverage_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,930 copying build/lib/multiqc/modules/dragen/time_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,932 copying build/lib/multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,934 copying build/lib/multiqc/modules/dragen/mapping_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,936 copying build/lib/multiqc/modules/dragen/trimmer_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,938 copying build/lib/multiqc/modules/dragen/coverage_hist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,940 copying build/lib/multiqc/modules/dragen/utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,943 copying build/lib/multiqc/modules/dragen/rna_transcript_cov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,945 copying build/lib/multiqc/modules/dragen/sc_atac_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,946 copying build/lib/multiqc/modules/dragen/sc_rna_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,949 copying build/lib/multiqc/modules/dragen/fragment_length.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,950 copying build/lib/multiqc/modules/dragen/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-15T15:29:12,953 creating build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-15T15:29:12,954 copying build/lib/multiqc/modules/librarian/librarian.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-15T15:29:12,956 copying build/lib/multiqc/modules/librarian/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-15T15:29:12,958 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-15T15:29:12,959 copying build/lib/multiqc/modules/rockhopper/rockhopper.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-15T15:29:12,962 copying build/lib/multiqc/modules/rockhopper/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-15T15:29:12,964 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-15T15:29:12,965 copying build/lib/multiqc/modules/sickle/sickle.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-15T15:29:12,967 copying build/lib/multiqc/modules/sickle/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-15T15:29:12,970 creating build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,971 copying build/lib/multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,973 copying build/lib/multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,976 copying build/lib/multiqc/modules/picard/InsertSizeMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,978 copying build/lib/multiqc/modules/picard/QualityYieldMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,980 copying build/lib/multiqc/modules/picard/MarkIlluminaAdapters.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,981 copying build/lib/multiqc/modules/picard/QualityByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,983 copying build/lib/multiqc/modules/picard/HsMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,986 copying build/lib/multiqc/modules/picard/RnaSeqMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,988 copying build/lib/multiqc/modules/picard/VariantCallingMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,990 copying build/lib/multiqc/modules/picard/MarkDuplicates.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,992 copying build/lib/multiqc/modules/picard/picard.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,994 copying build/lib/multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,996 copying build/lib/multiqc/modules/picard/RrbsSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:12,998 copying build/lib/multiqc/modules/picard/util.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,000 copying build/lib/multiqc/modules/picard/CrosscheckFingerprints.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,003 copying build/lib/multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,005 copying build/lib/multiqc/modules/picard/TargetedPcrMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,007 copying build/lib/multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,009 copying build/lib/multiqc/modules/picard/GcBiasMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,011 copying build/lib/multiqc/modules/picard/ValidateSamFile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,013 copying build/lib/multiqc/modules/picard/OxoGMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,015 copying build/lib/multiqc/modules/picard/IlluminaLaneMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,017 copying build/lib/multiqc/modules/picard/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,019 copying build/lib/multiqc/modules/picard/WgsMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-15T15:29:13,022 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-15T15:29:13,023 copying build/lib/multiqc/modules/hostile/hostile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-15T15:29:13,025 copying build/lib/multiqc/modules/hostile/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-15T15:29:13,027 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-15T15:29:13,028 copying build/lib/multiqc/modules/pychopper/pychopper.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-15T15:29:13,031 copying build/lib/multiqc/modules/pychopper/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-15T15:29:13,033 creating build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-15T15:29:13,034 copying build/lib/multiqc/modules/porechop/porechop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-15T15:29:13,037 copying build/lib/multiqc/modules/porechop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-15T15:29:13,039 creating build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-15T15:29:13,040 copying build/lib/multiqc/modules/metaphlan/metaphlan.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-15T15:29:13,043 copying build/lib/multiqc/modules/metaphlan/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-15T15:29:13,045 creating build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-15T15:29:13,046 copying build/lib/multiqc/modules/interop/interop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-15T15:29:13,049 copying build/lib/multiqc/modules/interop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-15T15:29:13,051 creating build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-15T15:29:13,052 copying build/lib/multiqc/modules/conpair/conpair.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-15T15:29:13,055 copying build/lib/multiqc/modules/conpair/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-15T15:29:13,057 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-15T15:29:13,058 copying build/lib/multiqc/modules/dedup/dedup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-15T15:29:13,060 copying build/lib/multiqc/modules/dedup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-15T15:29:13,063 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-15T15:29:13,064 copying build/lib/multiqc/modules/hicpro/hicpro.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-15T15:29:13,067 copying build/lib/multiqc/modules/hicpro/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-15T15:29:13,069 creating build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-15T15:29:13,070 copying build/lib/multiqc/modules/leehom/leehom.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-15T15:29:13,072 copying build/lib/multiqc/modules/leehom/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-15T15:29:13,074 creating build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-15T15:29:13,075 copying build/lib/multiqc/modules/megahit/megahit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-15T15:29:13,078 copying build/lib/multiqc/modules/megahit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-15T15:29:13,080 creating build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-15T15:29:13,081 copying build/lib/multiqc/modules/htseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-15T15:29:13,082 copying build/lib/multiqc/modules/htseq/htseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-15T15:29:13,085 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-15T15:29:13,086 copying build/lib/multiqc/modules/qorts/qorts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-15T15:29:13,089 copying build/lib/multiqc/modules/qorts/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-15T15:29:13,091 creating build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-15T15:29:13,092 copying build/lib/multiqc/modules/trimmomatic/trimmomatic.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-15T15:29:13,095 copying build/lib/multiqc/modules/trimmomatic/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-15T15:29:13,097 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-15T15:29:13,098 copying build/lib/multiqc/modules/bustools/bustools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-15T15:29:13,100 copying build/lib/multiqc/modules/bustools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-15T15:29:13,102 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-15T15:29:13,103 copying build/lib/multiqc/modules/hicup/hicup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-15T15:29:13,106 copying build/lib/multiqc/modules/hicup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-15T15:29:13,108 creating build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-15T15:29:13,108 copying build/lib/multiqc/modules/flexbar/flexbar.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-15T15:29:13,111 copying build/lib/multiqc/modules/flexbar/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-15T15:29:13,113 creating build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-15T15:29:13,114 copying build/lib/multiqc/modules/samblaster/samblaster.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-15T15:29:13,116 copying build/lib/multiqc/modules/samblaster/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-15T15:29:13,118 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-15T15:29:13,119 copying build/lib/multiqc/modules/sequali/sequali.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-15T15:29:13,122 copying build/lib/multiqc/modules/sequali/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-15T15:29:13,124 creating build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-15T15:29:13,125 copying build/lib/multiqc/modules/adapterremoval/adapterremoval.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-15T15:29:13,128 copying build/lib/multiqc/modules/adapterremoval/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-15T15:29:13,130 creating build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-15T15:29:13,131 copying build/lib/multiqc/modules/quast/quast.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-15T15:29:13,134 copying build/lib/multiqc/modules/quast/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-15T15:29:13,136 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-15T15:29:13,137 copying build/lib/multiqc/modules/biscuit/biscuit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-15T15:29:13,140 copying build/lib/multiqc/modules/biscuit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-15T15:29:13,142 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-15T15:29:13,143 copying build/lib/multiqc/modules/kallisto/kallisto.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-15T15:29:13,146 copying build/lib/multiqc/modules/kallisto/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-15T15:29:13,148 copying build/lib/multiqc/modules/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-15T15:29:13,150 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-15T15:29:13,151 copying build/lib/multiqc/modules/seqera_cli/seqera_cli.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-15T15:29:13,154 copying build/lib/multiqc/modules/seqera_cli/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-15T15:29:13,157 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-15T15:29:13,159 copying build/lib/multiqc/modules/biobambam2/biobambam2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-15T15:29:13,161 copying build/lib/multiqc/modules/biobambam2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-15T15:29:13,164 creating build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-15T15:29:13,165 copying build/lib/multiqc/modules/lima/lima.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-15T15:29:13,168 copying build/lib/multiqc/modules/lima/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-15T15:29:13,170 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-15T15:29:13,171 copying build/lib/multiqc/modules/snpeff/snpeff.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-15T15:29:13,174 copying build/lib/multiqc/modules/snpeff/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-15T15:29:13,177 creating build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-15T15:29:13,178 copying build/lib/multiqc/modules/truvari/truvari.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-15T15:29:13,180 copying build/lib/multiqc/modules/truvari/bench.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-15T15:29:13,182 copying build/lib/multiqc/modules/truvari/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-15T15:29:13,185 creating build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-15T15:29:13,186 copying build/lib/multiqc/modules/supernova/supernova.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-15T15:29:13,189 copying build/lib/multiqc/modules/supernova/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-15T15:29:13,191 creating build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,192 copying build/lib/multiqc/utils/util_functions.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,195 copying build/lib/multiqc/utils/report.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,197 copying build/lib/multiqc/utils/megaqc.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,199 copying build/lib/multiqc/utils/config.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,201 copying build/lib/multiqc/utils/mqc_colour.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,204 copying build/lib/multiqc/utils/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-15T15:29:13,206 copying build/lib/multiqc/config_defaults.yaml -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:13,208 copying build/lib/multiqc/multiqc.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:13,211 copying build/lib/multiqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-15T15:29:13,213 running install_egg_info 2024-05-15T15:29:13,217 Copying multiqc.egg-info to build/bdist.linux-armv7l/wheel/multiqc-1.22-py3.11.egg-info 2024-05-15T15:29:13,231 running install_scripts 2024-05-15T15:29:13,258 creating build/bdist.linux-armv7l/wheel/multiqc-1.22.dist-info/WHEEL 2024-05-15T15:29:13,261 creating '/tmp/pip-wheel-7sz_hjph/.tmp-bernjwpd/multiqc-1.22-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-15T15:29:13,264 adding 'multiqc/__init__.py' 2024-05-15T15:29:13,266 adding 'multiqc/__main__.py' 2024-05-15T15:29:13,270 adding 'multiqc/base_module.py' 2024-05-15T15:29:13,274 adding 'multiqc/config.py' 2024-05-15T15:29:13,276 adding 'multiqc/config_defaults.yaml' 2024-05-15T15:29:13,279 adding 'multiqc/interactive.py' 2024-05-15T15:29:13,282 adding 'multiqc/multiqc.py' 2024-05-15T15:29:13,288 adding 'multiqc/report.py' 2024-05-15T15:29:13,292 adding 'multiqc/search_patterns.yaml' 2024-05-15T15:29:13,294 adding 'multiqc/core/exceptions.py' 2024-05-15T15:29:13,297 adding 'multiqc/core/exec_modules.py' 2024-05-15T15:29:13,299 adding 'multiqc/core/file_search.py' 2024-05-15T15:29:13,301 adding 'multiqc/core/init_log.py' 2024-05-15T15:29:13,303 adding 'multiqc/core/plugin_hooks.py' 2024-05-15T15:29:13,305 adding 'multiqc/core/software_versions.py' 2024-05-15T15:29:13,307 adding 'multiqc/core/strict_helpers.py' 2024-05-15T15:29:13,309 adding 'multiqc/core/update_config.py' 2024-05-15T15:29:13,310 adding 'multiqc/core/version_check.py' 2024-05-15T15:29:13,314 adding 'multiqc/core/write_results.py' 2024-05-15T15:29:13,319 adding 'multiqc/modules/__init__.py' 2024-05-15T15:29:13,321 adding 'multiqc/modules/profile_runtime.py' 2024-05-15T15:29:13,323 adding 'multiqc/modules/software_versions.py' 2024-05-15T15:29:13,325 adding 'multiqc/modules/adapterremoval/__init__.py' 2024-05-15T15:29:13,328 adding 'multiqc/modules/adapterremoval/adapterremoval.py' 2024-05-15T15:29:13,330 adding 'multiqc/modules/afterqc/__init__.py' 2024-05-15T15:29:13,332 adding 'multiqc/modules/afterqc/afterqc.py' 2024-05-15T15:29:13,334 adding 'multiqc/modules/anglerfish/__init__.py' 2024-05-15T15:29:13,336 adding 'multiqc/modules/anglerfish/anglerfish.py' 2024-05-15T15:29:13,338 adding 'multiqc/modules/bakta/__init__.py' 2024-05-15T15:29:13,340 adding 'multiqc/modules/bakta/bakta.py' 2024-05-15T15:29:13,342 adding 'multiqc/modules/bamdst/__init__.py' 2024-05-15T15:29:13,344 adding 'multiqc/modules/bamdst/bamdst.py' 2024-05-15T15:29:13,346 adding 'multiqc/modules/bamtools/__init__.py' 2024-05-15T15:29:13,348 adding 'multiqc/modules/bamtools/bamtools.py' 2024-05-15T15:29:13,350 adding 'multiqc/modules/bamtools/stats.py' 2024-05-15T15:29:13,351 adding 'multiqc/modules/bbduk/__init__.py' 2024-05-15T15:29:13,353 adding 'multiqc/modules/bbduk/bbduk.py' 2024-05-15T15:29:13,356 adding 'multiqc/modules/bbmap/__init__.py' 2024-05-15T15:29:13,358 adding 'multiqc/modules/bbmap/bbmap.py' 2024-05-15T15:29:13,360 adding 'multiqc/modules/bbmap/bbmap_filetypes.py' 2024-05-15T15:29:13,362 adding 'multiqc/modules/bbmap/plot_aqhist.py' 2024-05-15T15:29:13,364 adding 'multiqc/modules/bbmap/plot_basic_hist.py' 2024-05-15T15:29:13,366 adding 'multiqc/modules/bbmap/plot_bhist.py' 2024-05-15T15:29:13,367 adding 'multiqc/modules/bbmap/plot_bqhist.py' 2024-05-15T15:29:13,368 adding 'multiqc/modules/bbmap/plot_covhist.py' 2024-05-15T15:29:13,369 adding 'multiqc/modules/bbmap/plot_idhist.py' 2024-05-15T15:29:13,371 adding 'multiqc/modules/bbmap/plot_ihist.py' 2024-05-15T15:29:13,372 adding 'multiqc/modules/bbmap/plot_indelhist.py' 2024-05-15T15:29:13,373 adding 'multiqc/modules/bbmap/plot_mhist.py' 2024-05-15T15:29:13,375 adding 'multiqc/modules/bbmap/plot_qahist.py' 2024-05-15T15:29:13,376 adding 'multiqc/modules/bbmap/plot_qchist.py' 2024-05-15T15:29:13,377 adding 'multiqc/modules/bbmap/plot_qhist.py' 2024-05-15T15:29:13,379 adding 'multiqc/modules/bcftools/__init__.py' 2024-05-15T15:29:13,380 adding 'multiqc/modules/bcftools/bcftools.py' 2024-05-15T15:29:13,382 adding 'multiqc/modules/bcftools/stats.py' 2024-05-15T15:29:13,384 adding 'multiqc/modules/bcl2fastq/__init__.py' 2024-05-15T15:29:13,387 adding 'multiqc/modules/bcl2fastq/bcl2fastq.py' 2024-05-15T15:29:13,388 adding 'multiqc/modules/bclconvert/__init__.py' 2024-05-15T15:29:13,392 adding 'multiqc/modules/bclconvert/bclconvert.py' 2024-05-15T15:29:13,394 adding 'multiqc/modules/biobambam2/__init__.py' 2024-05-15T15:29:13,396 adding 'multiqc/modules/biobambam2/biobambam2.py' 2024-05-15T15:29:13,397 adding 'multiqc/modules/biobloomtools/__init__.py' 2024-05-15T15:29:13,399 adding 'multiqc/modules/biobloomtools/biobloomtools.py' 2024-05-15T15:29:13,400 adding 'multiqc/modules/biscuit/__init__.py' 2024-05-15T15:29:13,404 adding 'multiqc/modules/biscuit/biscuit.py' 2024-05-15T15:29:13,406 adding 'multiqc/modules/bismark/__init__.py' 2024-05-15T15:29:13,409 adding 'multiqc/modules/bismark/bismark.py' 2024-05-15T15:29:13,410 adding 'multiqc/modules/bowtie1/__init__.py' 2024-05-15T15:29:13,412 adding 'multiqc/modules/bowtie1/bowtie1.py' 2024-05-15T15:29:13,414 adding 'multiqc/modules/bowtie2/__init__.py' 2024-05-15T15:29:13,416 adding 'multiqc/modules/bowtie2/bowtie2.py' 2024-05-15T15:29:13,417 adding 'multiqc/modules/bracken/__init__.py' 2024-05-15T15:29:13,419 adding 'multiqc/modules/bracken/bracken.py' 2024-05-15T15:29:13,420 adding 'multiqc/modules/busco/__init__.py' 2024-05-15T15:29:13,421 adding 'multiqc/modules/busco/busco.py' 2024-05-15T15:29:13,423 adding 'multiqc/modules/bustools/__init__.py' 2024-05-15T15:29:13,425 adding 'multiqc/modules/bustools/bustools.py' 2024-05-15T15:29:13,426 adding 'multiqc/modules/ccs/__init__.py' 2024-05-15T15:29:13,428 adding 'multiqc/modules/ccs/ccs.py' 2024-05-15T15:29:13,430 adding 'multiqc/modules/cellranger/__init__.py' 2024-05-15T15:29:13,431 adding 'multiqc/modules/cellranger/cellranger.py' 2024-05-15T15:29:13,433 adding 'multiqc/modules/cellranger/count.py' 2024-05-15T15:29:13,434 adding 'multiqc/modules/cellranger/utils.py' 2024-05-15T15:29:13,436 adding 'multiqc/modules/cellranger/vdj.py' 2024-05-15T15:29:13,438 adding 'multiqc/modules/checkqc/__init__.py' 2024-05-15T15:29:13,440 adding 'multiqc/modules/checkqc/checkqc.py' 2024-05-15T15:29:13,442 adding 'multiqc/modules/clipandmerge/__init__.py' 2024-05-15T15:29:13,443 adding 'multiqc/modules/clipandmerge/clipandmerge.py' 2024-05-15T15:29:13,445 adding 'multiqc/modules/clusterflow/__init__.py' 2024-05-15T15:29:13,447 adding 'multiqc/modules/clusterflow/clusterflow.py' 2024-05-15T15:29:13,449 adding 'multiqc/modules/conpair/__init__.py' 2024-05-15T15:29:13,450 adding 'multiqc/modules/conpair/conpair.py' 2024-05-15T15:29:13,452 adding 'multiqc/modules/custom_content/__init__.py' 2024-05-15T15:29:13,456 adding 'multiqc/modules/custom_content/custom_content.py' 2024-05-15T15:29:13,457 adding 'multiqc/modules/cutadapt/__init__.py' 2024-05-15T15:29:13,460 adding 'multiqc/modules/cutadapt/cutadapt.py' 2024-05-15T15:29:13,461 adding 'multiqc/modules/damageprofiler/__init__.py' 2024-05-15T15:29:13,463 adding 'multiqc/modules/damageprofiler/damageprofiler.py' 2024-05-15T15:29:13,465 adding 'multiqc/modules/dedup/__init__.py' 2024-05-15T15:29:13,466 adding 'multiqc/modules/dedup/dedup.py' 2024-05-15T15:29:13,468 adding 'multiqc/modules/deeptools/__init__.py' 2024-05-15T15:29:13,469 adding 'multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py' 2024-05-15T15:29:13,471 adding 'multiqc/modules/deeptools/bamPEFragmentSizeTable.py' 2024-05-15T15:29:13,472 adding 'multiqc/modules/deeptools/deeptools.py' 2024-05-15T15:29:13,474 adding 'multiqc/modules/deeptools/estimateReadFiltering.py' 2024-05-15T15:29:13,475 adding 'multiqc/modules/deeptools/plotCorrelation.py' 2024-05-15T15:29:13,477 adding 'multiqc/modules/deeptools/plotCoverage.py' 2024-05-15T15:29:13,478 adding 'multiqc/modules/deeptools/plotEnrichment.py' 2024-05-15T15:29:13,480 adding 'multiqc/modules/deeptools/plotFingerprint.py' 2024-05-15T15:29:13,481 adding 'multiqc/modules/deeptools/plotPCA.py' 2024-05-15T15:29:13,483 adding 'multiqc/modules/deeptools/plotProfile.py' 2024-05-15T15:29:13,485 adding 'multiqc/modules/diamond/__init__.py' 2024-05-15T15:29:13,486 adding 'multiqc/modules/diamond/diamond.py' 2024-05-15T15:29:13,487 adding 'multiqc/modules/disambiguate/__init__.py' 2024-05-15T15:29:13,489 adding 'multiqc/modules/disambiguate/disambiguate.py' 2024-05-15T15:29:13,491 adding 'multiqc/modules/dragen/__init__.py' 2024-05-15T15:29:13,492 adding 'multiqc/modules/dragen/coverage_hist.py' 2024-05-15T15:29:13,500 adding 'multiqc/modules/dragen/coverage_metrics.py' 2024-05-15T15:29:13,503 adding 'multiqc/modules/dragen/coverage_per_contig.py' 2024-05-15T15:29:13,504 adding 'multiqc/modules/dragen/dragen.py' 2024-05-15T15:29:13,506 adding 'multiqc/modules/dragen/dragen_gc_metrics.py' 2024-05-15T15:29:13,507 adding 'multiqc/modules/dragen/fragment_length.py' 2024-05-15T15:29:13,511 adding 'multiqc/modules/dragen/mapping_metrics.py' 2024-05-15T15:29:13,513 adding 'multiqc/modules/dragen/overall_mean_cov.py' 2024-05-15T15:29:13,514 adding 'multiqc/modules/dragen/ploidy_estimation_metrics.py' 2024-05-15T15:29:13,515 adding 'multiqc/modules/dragen/rna_quant_metrics.py' 2024-05-15T15:29:13,517 adding 'multiqc/modules/dragen/rna_transcript_cov.py' 2024-05-15T15:29:13,518 adding 'multiqc/modules/dragen/sc_atac_metrics.py' 2024-05-15T15:29:13,519 adding 'multiqc/modules/dragen/sc_rna_metrics.py' 2024-05-15T15:29:13,521 adding 'multiqc/modules/dragen/time_metrics.py' 2024-05-15T15:29:13,522 adding 'multiqc/modules/dragen/trimmer_metrics.py' 2024-05-15T15:29:13,524 adding 'multiqc/modules/dragen/utils.py' 2024-05-15T15:29:13,527 adding 'multiqc/modules/dragen/vc_metrics.py' 2024-05-15T15:29:13,529 adding 'multiqc/modules/dragen_fastqc/__init__.py' 2024-05-15T15:29:13,531 adding 'multiqc/modules/dragen_fastqc/base_metrics.py' 2024-05-15T15:29:13,533 adding 'multiqc/modules/dragen_fastqc/content_metrics.py' 2024-05-15T15:29:13,535 adding 'multiqc/modules/dragen_fastqc/dragen_fastqc.py' 2024-05-15T15:29:13,537 adding 'multiqc/modules/dragen_fastqc/gc_metrics.py' 2024-05-15T15:29:13,539 adding 'multiqc/modules/dragen_fastqc/read_metrics.py' 2024-05-15T15:29:13,541 adding 'multiqc/modules/dragen_fastqc/util.py' 2024-05-15T15:29:13,546 adding 'multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js' 2024-05-15T15:29:13,548 adding 'multiqc/modules/eigenstratdatabasetools/__init__.py' 2024-05-15T15:29:13,550 adding 'multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py' 2024-05-15T15:29:13,552 adding 'multiqc/modules/fastp/__init__.py' 2024-05-15T15:29:13,555 adding 'multiqc/modules/fastp/fastp.py' 2024-05-15T15:29:13,557 adding 'multiqc/modules/fastq_screen/__init__.py' 2024-05-15T15:29:13,559 adding 'multiqc/modules/fastq_screen/fastq_screen.py' 2024-05-15T15:29:13,561 adding 'multiqc/modules/fastqc/__init__.py' 2024-05-15T15:29:13,570 adding 'multiqc/modules/fastqc/fastqc.py' 2024-05-15T15:29:13,573 adding 'multiqc/modules/fastqc/assets/css/multiqc_fastqc.css' 2024-05-15T15:29:13,578 adding 'multiqc/modules/fastqc/assets/js/multiqc_fastqc.js' 2024-05-15T15:29:13,580 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt' 2024-05-15T15:29:13,582 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt' 2024-05-15T15:29:13,584 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt' 2024-05-15T15:29:13,585 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt' 2024-05-15T15:29:13,587 adding 'multiqc/modules/featureCounts/__init__.py' 2024-05-15T15:29:13,589 adding 'multiqc/modules/featureCounts/feature_counts.py' 2024-05-15T15:29:13,592 adding 'multiqc/modules/fgbio/ErrorRateByReadPosition.py' 2024-05-15T15:29:13,594 adding 'multiqc/modules/fgbio/__init__.py' 2024-05-15T15:29:13,595 adding 'multiqc/modules/fgbio/fgbio.py' 2024-05-15T15:29:13,597 adding 'multiqc/modules/fgbio/groupreadsbyumi.py' 2024-05-15T15:29:13,599 adding 'multiqc/modules/filtlong/__init__.py' 2024-05-15T15:29:13,601 adding 'multiqc/modules/filtlong/filtlong.py' 2024-05-15T15:29:13,603 adding 'multiqc/modules/flash/__init__.py' 2024-05-15T15:29:13,605 adding 'multiqc/modules/flash/flash.py' 2024-05-15T15:29:13,607 adding 'multiqc/modules/flexbar/__init__.py' 2024-05-15T15:29:13,609 adding 'multiqc/modules/flexbar/flexbar.py' 2024-05-15T15:29:13,611 adding 'multiqc/modules/freyja/__init__.py' 2024-05-15T15:29:13,613 adding 'multiqc/modules/freyja/freyja.py' 2024-05-15T15:29:13,615 adding 'multiqc/modules/gatk/__init__.py' 2024-05-15T15:29:13,618 adding 'multiqc/modules/gatk/analyze_saturation_mutagenesis.py' 2024-05-15T15:29:13,620 adding 'multiqc/modules/gatk/base_recalibrator.py' 2024-05-15T15:29:13,622 adding 'multiqc/modules/gatk/gatk.py' 2024-05-15T15:29:13,624 adding 'multiqc/modules/gatk/varianteval.py' 2024-05-15T15:29:13,626 adding 'multiqc/modules/gffcompare/__init__.py' 2024-05-15T15:29:13,628 adding 'multiqc/modules/gffcompare/gffcompare.py' 2024-05-15T15:29:13,629 adding 'multiqc/modules/goleft_indexcov/__init__.py' 2024-05-15T15:29:13,631 adding 'multiqc/modules/goleft_indexcov/goleft_indexcov.py' 2024-05-15T15:29:13,633 adding 'multiqc/modules/gopeaks/__init__.py' 2024-05-15T15:29:13,634 adding 'multiqc/modules/gopeaks/gopeaks.py' 2024-05-15T15:29:13,636 adding 'multiqc/modules/happy/__init__.py' 2024-05-15T15:29:13,637 adding 'multiqc/modules/happy/happy.py' 2024-05-15T15:29:13,639 adding 'multiqc/modules/hicexplorer/__init__.py' 2024-05-15T15:29:13,641 adding 'multiqc/modules/hicexplorer/hicexplorer.py' 2024-05-15T15:29:13,642 adding 'multiqc/modules/hicpro/__init__.py' 2024-05-15T15:29:13,644 adding 'multiqc/modules/hicpro/hicpro.py' 2024-05-15T15:29:13,646 adding 'multiqc/modules/hicup/__init__.py' 2024-05-15T15:29:13,647 adding 'multiqc/modules/hicup/hicup.py' 2024-05-15T15:29:13,649 adding 'multiqc/modules/hifiasm/__init__.py' 2024-05-15T15:29:13,650 adding 'multiqc/modules/hifiasm/hifiasm.py' 2024-05-15T15:29:13,652 adding 'multiqc/modules/hisat2/__init__.py' 2024-05-15T15:29:13,654 adding 'multiqc/modules/hisat2/hisat2.py' 2024-05-15T15:29:13,655 adding 'multiqc/modules/homer/__init__.py' 2024-05-15T15:29:13,656 adding 'multiqc/modules/homer/findpeaks.py' 2024-05-15T15:29:13,658 adding 'multiqc/modules/homer/homer.py' 2024-05-15T15:29:13,660 adding 'multiqc/modules/homer/tagdirectory.py' 2024-05-15T15:29:13,662 adding 'multiqc/modules/hops/__init__.py' 2024-05-15T15:29:13,663 adding 'multiqc/modules/hops/hops.py' 2024-05-15T15:29:13,665 adding 'multiqc/modules/hostile/__init__.py' 2024-05-15T15:29:13,666 adding 'multiqc/modules/hostile/hostile.py' 2024-05-15T15:29:13,668 adding 'multiqc/modules/htseq/__init__.py' 2024-05-15T15:29:13,669 adding 'multiqc/modules/htseq/htseq.py' 2024-05-15T15:29:13,671 adding 'multiqc/modules/humid/__init__.py' 2024-05-15T15:29:13,672 adding 'multiqc/modules/humid/clusters.py' 2024-05-15T15:29:13,673 adding 'multiqc/modules/humid/counts.py' 2024-05-15T15:29:13,674 adding 'multiqc/modules/humid/humid.py' 2024-05-15T15:29:13,676 adding 'multiqc/modules/humid/neighbours.py' 2024-05-15T15:29:13,677 adding 'multiqc/modules/humid/stats.py' 2024-05-15T15:29:13,679 adding 'multiqc/modules/interop/__init__.py' 2024-05-15T15:29:13,681 adding 'multiqc/modules/interop/interop.py' 2024-05-15T15:29:13,683 adding 'multiqc/modules/isoseq/__init__.py' 2024-05-15T15:29:13,684 adding 'multiqc/modules/isoseq/isoseq.py' 2024-05-15T15:29:13,686 adding 'multiqc/modules/ivar/__init__.py' 2024-05-15T15:29:13,688 adding 'multiqc/modules/ivar/ivar.py' 2024-05-15T15:29:13,690 adding 'multiqc/modules/jcvi/__init__.py' 2024-05-15T15:29:13,691 adding 'multiqc/modules/jcvi/jcvi.py' 2024-05-15T15:29:13,693 adding 'multiqc/modules/jellyfish/__init__.py' 2024-05-15T15:29:13,695 adding 'multiqc/modules/jellyfish/jellyfish.py' 2024-05-15T15:29:13,696 adding 'multiqc/modules/kaiju/__init__.py' 2024-05-15T15:29:13,698 adding 'multiqc/modules/kaiju/kaiju.py' 2024-05-15T15:29:13,700 adding 'multiqc/modules/kallisto/__init__.py' 2024-05-15T15:29:13,701 adding 'multiqc/modules/kallisto/kallisto.py' 2024-05-15T15:29:13,703 adding 'multiqc/modules/kat/__init__.py' 2024-05-15T15:29:13,704 adding 'multiqc/modules/kat/kat.py' 2024-05-15T15:29:13,706 adding 'multiqc/modules/kraken/__init__.py' 2024-05-15T15:29:13,708 adding 'multiqc/modules/kraken/kraken.py' 2024-05-15T15:29:13,710 adding 'multiqc/modules/leehom/__init__.py' 2024-05-15T15:29:13,711 adding 'multiqc/modules/leehom/leehom.py' 2024-05-15T15:29:13,713 adding 'multiqc/modules/librarian/__init__.py' 2024-05-15T15:29:13,715 adding 'multiqc/modules/librarian/librarian.py' 2024-05-15T15:29:13,716 adding 'multiqc/modules/lima/__init__.py' 2024-05-15T15:29:13,719 adding 'multiqc/modules/lima/lima.py' 2024-05-15T15:29:13,720 adding 'multiqc/modules/longranger/__init__.py' 2024-05-15T15:29:13,722 adding 'multiqc/modules/longranger/longranger.py' 2024-05-15T15:29:13,724 adding 'multiqc/modules/macs2/__init__.py' 2024-05-15T15:29:13,725 adding 'multiqc/modules/macs2/macs2.py' 2024-05-15T15:29:13,727 adding 'multiqc/modules/malt/__init__.py' 2024-05-15T15:29:13,729 adding 'multiqc/modules/malt/malt.py' 2024-05-15T15:29:13,730 adding 'multiqc/modules/mapdamage/__init__.py' 2024-05-15T15:29:13,732 adding 'multiqc/modules/mapdamage/mapdamage.py' 2024-05-15T15:29:13,734 adding 'multiqc/modules/megahit/__init__.py' 2024-05-15T15:29:13,735 adding 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adding 'multiqc/templates/__init__.py' 2024-05-15T15:29:14,105 adding 'multiqc/templates/default/__init__.py' 2024-05-15T15:29:14,106 adding 'multiqc/templates/default/base.html' 2024-05-15T15:29:14,107 adding 'multiqc/templates/default/content.html' 2024-05-15T15:29:14,109 adding 'multiqc/templates/default/foot.html' 2024-05-15T15:29:14,110 adding 'multiqc/templates/default/footer.html' 2024-05-15T15:29:14,111 adding 'multiqc/templates/default/general_stats.html' 2024-05-15T15:29:14,112 adding 'multiqc/templates/default/head.html' 2024-05-15T15:29:14,114 adding 'multiqc/templates/default/header.html' 2024-05-15T15:29:14,115 adding 'multiqc/templates/default/includes.html' 2024-05-15T15:29:14,116 adding 'multiqc/templates/default/nav.html' 2024-05-15T15:29:14,119 adding 'multiqc/templates/default/toolbox.html' 2024-05-15T15:29:14,129 adding 'multiqc/templates/default/assets/css/bootstrap.min.css' 2024-05-15T15:29:14,133 adding 'multiqc/templates/default/assets/css/default_multiqc.css' 2024-05-15T15:29:14,134 adding 'multiqc/templates/default/assets/css/jquery.toast.css' 2024-05-15T15:29:14,138 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot' 2024-05-15T15:29:14,158 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg' 2024-05-15T15:29:14,165 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf' 2024-05-15T15:29:14,169 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff' 2024-05-15T15:29:14,171 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2' 2024-05-15T15:29:14,174 adding 'multiqc/templates/default/assets/img/MultiQC_logo.png' 2024-05-15T15:29:14,175 adding 'multiqc/templates/default/assets/img/MultiQC_logo_dark.svg' 2024-05-15T15:29:14,177 adding 'multiqc/templates/default/assets/img/favicon-16x16.png' 2024-05-15T15:29:14,178 adding 'multiqc/templates/default/assets/img/favicon-32x32.png' 2024-05-15T15:29:14,180 adding 'multiqc/templates/default/assets/img/favicon-96x96.png' 2024-05-15T15:29:14,181 adding 'multiqc/templates/default/assets/img/seqera_logo.png' 2024-05-15T15:29:14,183 adding 'multiqc/templates/default/assets/img/seqera_logo_mono.png' 2024-05-15T15:29:14,185 adding 'multiqc/templates/default/assets/js/decompress.js' 2024-05-15T15:29:14,186 adding 'multiqc/templates/default/assets/js/flat.js' 2024-05-15T15:29:14,187 adding 'multiqc/templates/default/assets/js/multiqc.js' 2024-05-15T15:29:14,190 adding 'multiqc/templates/default/assets/js/plotting.js' 2024-05-15T15:29:14,191 adding 'multiqc/templates/default/assets/js/render.js' 2024-05-15T15:29:14,193 adding 'multiqc/templates/default/assets/js/tables.js' 2024-05-15T15:29:14,198 adding 'multiqc/templates/default/assets/js/toolbox.js' 2024-05-15T15:29:14,200 adding 'multiqc/templates/default/assets/js/packages/FileSaver.min.js' 2024-05-15T15:29:14,204 adding 'multiqc/templates/default/assets/js/packages/bootstrap.min.js' 2024-05-15T15:29:14,216 adding 'multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js' 2024-05-15T15:29:14,221 adding 'multiqc/templates/default/assets/js/packages/jquery-ui.min.js' 2024-05-15T15:29:14,227 adding 'multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js' 2024-05-15T15:29:14,229 adding 'multiqc/templates/default/assets/js/packages/jquery.toast.min.js' 2024-05-15T15:29:14,241 adding 'multiqc/templates/default/assets/js/packages/jszip.min.js' 2024-05-15T15:29:14,244 adding 'multiqc/templates/default/assets/js/packages/pako_inflate.min.js' 2024-05-15T15:29:15,245 adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.js' 2024-05-15T15:29:15,732 adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js' 2024-05-15T15:29:15,756 adding 'multiqc/templates/default/assets/js/plots/bar.js' 2024-05-15T15:29:15,758 adding 'multiqc/templates/default/assets/js/plots/box.js' 2024-05-15T15:29:15,759 adding 'multiqc/templates/default/assets/js/plots/heatmap.js' 2024-05-15T15:29:15,761 adding 'multiqc/templates/default/assets/js/plots/line.js' 2024-05-15T15:29:15,762 adding 'multiqc/templates/default/assets/js/plots/scatter.js' 2024-05-15T15:29:15,764 adding 'multiqc/templates/default/assets/js/plots/violin.js' 2024-05-15T15:29:15,766 adding 'multiqc/templates/gathered/__init__.py' 2024-05-15T15:29:15,767 adding 'multiqc/templates/gathered/content.html' 2024-05-15T15:29:15,768 adding 'multiqc/templates/gathered/nav.html' 2024-05-15T15:29:15,770 adding 'multiqc/templates/geo/__init__.py' 2024-05-15T15:29:15,771 adding 'multiqc/templates/geo/includes.html' 2024-05-15T15:29:15,782 adding 'multiqc/templates/geo/assets/css/bootstrap.min.css' 2024-05-15T15:29:15,784 adding 'multiqc/templates/geo/assets/img/emailme.gif' 2024-05-15T15:29:15,790 adding 'multiqc/templates/geo/assets/img/flames.gif' 2024-05-15T15:29:15,792 adding 'multiqc/templates/geo/assets/img/glyphicons-halflings-white.png' 2024-05-15T15:29:15,794 adding 'multiqc/templates/geo/assets/img/glyphicons-halflings.png' 2024-05-15T15:29:15,797 adding 'multiqc/templates/geo/assets/img/hot.gif' 2024-05-15T15:29:15,806 adding 'multiqc/templates/geo/assets/img/mchammer.gif' 2024-05-15T15:29:15,809 adding 'multiqc/templates/geo/assets/img/microfab.gif' 2024-05-15T15:29:15,813 adding 'multiqc/templates/geo/assets/img/new.gif' 2024-05-15T15:29:15,815 adding 'multiqc/templates/geo/assets/img/new2.gif' 2024-05-15T15:29:15,816 adding 'multiqc/templates/geo/assets/img/progress.gif' 2024-05-15T15:29:15,818 adding 'multiqc/templates/geo/assets/img/rainbow.gif' 2024-05-15T15:29:15,820 adding 'multiqc/templates/geo/assets/img/stars.gif' 2024-05-15T15:29:15,821 adding 'multiqc/templates/sections/__init__.py' 2024-05-15T15:29:15,822 adding 'multiqc/templates/sections/content.html' 2024-05-15T15:29:15,824 adding 'multiqc/templates/simple/__init__.py' 2024-05-15T15:29:15,825 adding 'multiqc/templates/simple/foot.html' 2024-05-15T15:29:15,826 adding 'multiqc/templates/simple/header.html' 2024-05-15T15:29:15,828 adding 'multiqc/templates/simple/includes.html' 2024-05-15T15:29:15,829 adding 'multiqc/templates/simple/nav.html' 2024-05-15T15:29:15,830 adding 'multiqc/templates/simple/toolbox.html' 2024-05-15T15:29:15,831 adding 'multiqc/utils/__init__.py' 2024-05-15T15:29:15,832 adding 'multiqc/utils/config.py' 2024-05-15T15:29:15,833 adding 'multiqc/utils/megaqc.py' 2024-05-15T15:29:15,836 adding 'multiqc/utils/mqc_colour.py' 2024-05-15T15:29:15,837 adding 'multiqc/utils/report.py' 2024-05-15T15:29:15,839 adding 'multiqc/utils/util_functions.py' 2024-05-15T15:29:15,845 adding 'multiqc-1.22.dist-info/LICENSE' 2024-05-15T15:29:15,852 adding 'multiqc-1.22.dist-info/METADATA' 2024-05-15T15:29:15,854 adding 'multiqc-1.22.dist-info/WHEEL' 2024-05-15T15:29:15,855 adding 'multiqc-1.22.dist-info/entry_points.txt' 2024-05-15T15:29:15,856 adding 'multiqc-1.22.dist-info/top_level.txt' 2024-05-15T15:29:15,864 adding 'multiqc-1.22.dist-info/RECORD' 2024-05-15T15:29:15,929 removing build/bdist.linux-armv7l/wheel 2024-05-15T15:29:16,231 Building wheel for multiqc (pyproject.toml): finished with status 'done' 2024-05-15T15:29:16,344 Created wheel for multiqc: filename=multiqc-1.22-py3-none-any.whl size=4476999 sha256=18f07e1a35ccfb9ef4ef2b78fe2cee9ea86c93543d51c7518aa87bdf06a7c0ff 2024-05-15T15:29:16,345 Stored in directory: /tmp/pip-ephem-wheel-cache-2xjscg86/wheels/95/ab/1c/2bab1891eaaa3da39c038d8aa448b882cac81374a1b29c8052 2024-05-15T15:29:16,394 Successfully built multiqc 2024-05-15T15:29:16,501 Removed build tracker: '/tmp/pip-build-tracker-44drg0hn'