2024-05-16T13:00:00,167 Created temporary directory: /tmp/pip-build-tracker-g4pu5hyq 2024-05-16T13:00:00,168 Initialized build tracking at /tmp/pip-build-tracker-g4pu5hyq 2024-05-16T13:00:00,169 Created build tracker: /tmp/pip-build-tracker-g4pu5hyq 2024-05-16T13:00:00,169 Entered build tracker: /tmp/pip-build-tracker-g4pu5hyq 2024-05-16T13:00:00,170 Created temporary directory: /tmp/pip-wheel-fgcaoruu 2024-05-16T13:00:00,173 Created temporary directory: /tmp/pip-ephem-wheel-cache-4iq112y7 2024-05-16T13:00:00,198 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-16T13:00:00,201 2 location(s) to search for versions of tmd: 2024-05-16T13:00:00,201 * https://pypi.org/simple/tmd/ 2024-05-16T13:00:00,201 * https://www.piwheels.org/simple/tmd/ 2024-05-16T13:00:00,202 Fetching project page and analyzing links: https://pypi.org/simple/tmd/ 2024-05-16T13:00:00,203 Getting page https://pypi.org/simple/tmd/ 2024-05-16T13:00:00,204 Found index url https://pypi.org/simple/ 2024-05-16T13:00:00,421 Fetched page https://pypi.org/simple/tmd/ as application/vnd.pypi.simple.v1+json 2024-05-16T13:00:00,426 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/fd/5b/a1a63aa7b6e7b95bad3b3fa0907a99efab29ee424833b19589e544bcd23b/tmd-2.0.2-py3-none-any.whl (from https://pypi.org/simple/tmd/) 2024-05-16T13:00:00,426 Found link https://files.pythonhosted.org/packages/4b/53/cadc69ebb8faec95f410614f59f59a87df70719d45c9601a4f2f8201fddc/tmd-2.0.2.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.2 2024-05-16T13:00:00,427 Found link https://files.pythonhosted.org/packages/0f/e6/0cb4fb27e231b5a45401bc4e115fa759d23a022f419754722f42a08f05c4/tmd-2.0.3.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.3 2024-05-16T13:00:00,428 Found link https://files.pythonhosted.org/packages/a1/6c/80e39656370baaabae4f2b6df8d5962b7dc93e367178087faabd0605c33b/tmd-2.0.4.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.4 2024-05-16T13:00:00,428 Found link https://files.pythonhosted.org/packages/30/89/2503f01f96ff60f5cec27377a7a26e692de4f55ebd18c6a7efb8e3bcc514/tmd-2.0.5.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.5 2024-05-16T13:00:00,429 Found link https://files.pythonhosted.org/packages/91/1e/963d2c6043f7ef55da341b102953116c5ac061ccd8fa982976a07e48c27c/tmd-2.0.7.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.7 2024-05-16T13:00:00,430 Found link https://files.pythonhosted.org/packages/67/bb/ce48e4704d8b58abbdcaac4a25998550424db9e9d4c6bd2d8602f1eb836c/tmd-2.0.8.tar.gz (from https://pypi.org/simple/tmd/), version: 2.0.8 2024-05-16T13:00:00,431 Found link https://files.pythonhosted.org/packages/9c/41/c0b7a54934ab412a486046088fc9c2f0598fd8886241ff0b0074839f5581/tmd-2.0.9.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.6), version: 2.0.9 2024-05-16T13:00:00,432 Found link https://files.pythonhosted.org/packages/10/50/47885a6bf1a2c5fe51922093d3f25a3c61f5233bf1fdec639236c56f9433/tmd-2.0.10.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.6), version: 2.0.10 2024-05-16T13:00:00,433 Found link https://files.pythonhosted.org/packages/16/d6/5ddd62f0c40e08ca14cb6680fbc10933cdaa52c5ed8aec94c296ae5f7d7e/tmd-2.0.11.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.6), version: 2.0.11 2024-05-16T13:00:00,434 Found link https://files.pythonhosted.org/packages/be/4b/1139acbc36f01d626e754eee858eab1d2d2899aee017c39163a6e9040809/tmd-2.1.0.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.7), version: 2.1.0 2024-05-16T13:00:00,435 Found link https://files.pythonhosted.org/packages/cd/0b/ee081c996cadf649ddfdc98322e288548473c8ab9e0ab9c32482ac3cccfe/tmd-2.2.0.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.7), version: 2.2.0 2024-05-16T13:00:00,435 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/ee/ca/b5a359551f4c33a55644af6661c53becfee41462ff52536da5a86de2e7dc/TMD-2.3.0-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,436 Found link https://files.pythonhosted.org/packages/56/87/05e0e85b8d7d6983c0b3f5247eba55457b88fbc224944fa95f17f558acdf/TMD-2.3.0.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.7), version: 2.3.0 2024-05-16T13:00:00,437 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/c2/18/9431f0d9dab6b21c84a9cca09ba4e99e8693dcb28c8cf15ad4bbcff5d996/TMD-2.3.1-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,438 Found link https://files.pythonhosted.org/packages/8b/81/884b2d755669ad63686b53d09b442a89a1e0be8b12f8611bdbb37d59a6dc/TMD-2.3.1.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.7), version: 2.3.1 2024-05-16T13:00:00,439 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/c9/3b/17b15f0d3f6fd96d0bbaac192dcb96e0194361b350d2449475bcfb4a7b1b/TMD-2.4.0-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,440 Found link https://files.pythonhosted.org/packages/8d/8e/492882d21f937b038224ae58ed02092836abee81235e9435c5eaf7574437/TMD-2.4.0.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.8), version: 2.4.0 2024-05-16T13:00:00,440 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/65/b9/845a25c141789b3d3f96b3c13adf2857a6aa1d8b36a13648305b07682375/TMD-2.4.1-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,441 Found link https://files.pythonhosted.org/packages/6d/86/b6fb7bf419b9dc090266bae2d37432b7a2ec61727544987df1bc8248510e/TMD-2.4.1.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.8), version: 2.4.1 2024-05-16T13:00:00,442 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/d6/d6/09cbb89d3afbb36ce9f859b426654f0d2aea40aa75b9110505dad9cf33b0/TMD-2.4.2-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,443 Found link https://files.pythonhosted.org/packages/a3/01/aec79fd86a53ee64a2dbd493381de6ad2d24e82d98947b47047173747a00/TMD-2.4.2.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.8), version: 2.4.2 2024-05-16T13:00:00,443 Skipping link: No binaries permitted for tmd: https://files.pythonhosted.org/packages/8f/d7/9ebdce7a75d90dfde82a2f0de550c4555caad58c7d2bde5e32c0ba870476/TMD-2.4.3-py3-none-any.whl (from https://pypi.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,444 Found link https://files.pythonhosted.org/packages/12/b4/33ec0c71409c29459e5e7b87f891a8c2e447aed2c0f578a806604fae8a78/tmd-2.4.3.tar.gz (from https://pypi.org/simple/tmd/) (requires-python:>=3.8), version: 2.4.3 2024-05-16T13:00:00,445 Fetching project page and analyzing links: https://www.piwheels.org/simple/tmd/ 2024-05-16T13:00:00,446 Getting page https://www.piwheels.org/simple/tmd/ 2024-05-16T13:00:00,447 Found index url https://www.piwheels.org/simple/ 2024-05-16T13:00:00,640 Fetched page https://www.piwheels.org/simple/tmd/ as text/html 2024-05-16T13:00:00,645 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/TMD-2.4.2-py3-none-any.whl#sha256=bf6c56adcfbf0868eea15e1e28fb3c7f537d737e9d27eafa48d70b38e95ebb64 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,646 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/TMD-2.4.1-py3-none-any.whl#sha256=fa4f703011702a73b074b6b0c04f8e2f0b59b1781e79b29c11902cc7449160d7 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,646 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/TMD-2.4.0-py3-none-any.whl#sha256=b6f3727defbc7993445bdfad21bcc0a7988e49f5e5a157be14f87df20b9d413a (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.8) 2024-05-16T13:00:00,647 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/TMD-2.3.1-py3-none-any.whl#sha256=2700a80bcbc680b1ccc277c2de3a75039e527dc419eff7de04abc33e2f8f194f (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,648 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/TMD-2.3.0-py3-none-any.whl#sha256=eb394fa1a41a68f38d14af539f7791753349f7260b1c0b9c4373391a74c78dc7 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,648 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.2.0-py3-none-any.whl#sha256=06c2f93b1d4a5173e74560e8a3560f76af0aa5d3c054c83a98e00df60e97bce5 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,649 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.1.0-py3-none-any.whl#sha256=5999984ee339ab8d17ffe5d879a946f6240e1771a5ea8c0a9447820d9715b7be (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.7) 2024-05-16T13:00:00,649 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.11-py3-none-any.whl#sha256=8c044b084d51518e9dc1eb0bd4bc19c48f285771f7a9c1d40e8c6478c123e214 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.6) 2024-05-16T13:00:00,650 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.10-py3-none-any.whl#sha256=56ee5f2fa452d3307555c60c5ba1a69adcb19366b816753db8e977d6a681a56d (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.6) 2024-05-16T13:00:00,650 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.9-py3-none-any.whl#sha256=3c73f98ab8c3fb6159c599fb982398d9d92d202715bf74496c1b62aba5674098 (from https://www.piwheels.org/simple/tmd/) (requires-python:>=3.6) 2024-05-16T13:00:00,651 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.8-py3-none-any.whl#sha256=b820da7d5e7d0bce5e4ffc1be5d40e186105c5e1734e015f0aecb06e4fd3dcc1 (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,651 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.7-py3-none-any.whl#sha256=49cbac09877c154f53976594898451722b47c944f239071787e185ccfef95b90 (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,651 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.5-py3-none-any.whl#sha256=d05450512e43cd3a4690a8e101ebc0e13d8633f48618ffe981989446d98aad1f (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,652 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.4-py3-none-any.whl#sha256=c484fb645737cbfb12ff974bb6b2447cab30b6136ed8838a3a6f8e6c9eb29764 (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,653 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.3-py3-none-any.whl#sha256=99c82dad9accbbf6f39b6499713056af266660c0fa3917df2bbd9bdb4dcf387c (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,653 Skipping link: No binaries permitted for tmd: https://www.piwheels.org/simple/tmd/tmd-2.0.2-py3-none-any.whl#sha256=fd913c48c639dcc3bec04e737d6922673d2110fb66375d50e289d146ccd5b8e9 (from https://www.piwheels.org/simple/tmd/) 2024-05-16T13:00:00,654 Skipping link: not a file: https://www.piwheels.org/simple/tmd/ 2024-05-16T13:00:00,655 Skipping link: not a file: https://pypi.org/simple/tmd/ 2024-05-16T13:00:00,675 Given no hashes to check 1 links for project 'tmd': discarding no candidates 2024-05-16T13:00:00,693 Collecting tmd==2.4.3 2024-05-16T13:00:00,695 Created temporary directory: /tmp/pip-unpack-ztjo2nxv 2024-05-16T13:00:00,908 Downloading tmd-2.4.3.tar.gz (133 kB) 2024-05-16T13:00:01,275 Added tmd==2.4.3 from https://files.pythonhosted.org/packages/12/b4/33ec0c71409c29459e5e7b87f891a8c2e447aed2c0f578a806604fae8a78/tmd-2.4.3.tar.gz to build tracker '/tmp/pip-build-tracker-g4pu5hyq' 2024-05-16T13:00:01,280 Created temporary directory: /tmp/pip-build-env-0nxw0eyh 2024-05-16T13:00:01,285 Installing build dependencies: started 2024-05-16T13:00:01,287 Running command pip subprocess to install build dependencies 2024-05-16T13:00:02,526 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-16T13:00:03,049 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-16T13:00:04,689 Collecting setuptools>=45 2024-05-16T13:00:04,720 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-05-16T13:00:05,044 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-05-16T13:00:05,058 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-05-16T13:00:05,445 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-05-16T13:00:05,459 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-05-16T13:00:08,022 Installing collected packages: setuptools, packaging, setuptools_scm 2024-05-16T13:00:11,763 Successfully installed packaging-24.0 setuptools-69.5.1 setuptools_scm-8.1.0 2024-05-16T13:00:12,581 Installing build dependencies: finished with status 'done' 2024-05-16T13:00:12,585 Getting requirements to build wheel: started 2024-05-16T13:00:12,587 Running command Getting requirements to build wheel 2024-05-16T13:00:13,200 Getting requirements to build wheel: finished with status 'done' 2024-05-16T13:00:13,220 Installing backend dependencies: started 2024-05-16T13:00:13,221 Running command pip subprocess to install backend dependencies 2024-05-16T13:00:14,353 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-16T13:00:14,847 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-16T13:00:15,353 Collecting wheel 2024-05-16T13:00:15,369 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-05-16T13:00:17,624 Installing collected packages: wheel 2024-05-16T13:00:17,859 Creating /tmp/pip-build-env-0nxw0eyh/normal/local/bin 2024-05-16T13:00:17,862 changing mode of /tmp/pip-build-env-0nxw0eyh/normal/local/bin/wheel to 755 2024-05-16T13:00:17,873 Successfully installed wheel-0.43.0 2024-05-16T13:00:18,404 Installing backend dependencies: finished with status 'done' 2024-05-16T13:00:18,406 Created temporary directory: /tmp/pip-modern-metadata-ter02l6g 2024-05-16T13:00:18,408 Preparing metadata (pyproject.toml): started 2024-05-16T13:00:18,409 Running command Preparing metadata (pyproject.toml) 2024-05-16T13:00:19,020 running dist_info 2024-05-16T13:00:19,026 creating /tmp/pip-modern-metadata-ter02l6g/TMD.egg-info 2024-05-16T13:00:19,031 writing /tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/PKG-INFO 2024-05-16T13:00:19,039 writing dependency_links to /tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/dependency_links.txt 2024-05-16T13:00:19,043 writing requirements to /tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/requires.txt 2024-05-16T13:00:19,044 writing top-level names to /tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/top_level.txt 2024-05-16T13:00:19,045 writing manifest file '/tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/SOURCES.txt' 2024-05-16T13:00:19,095 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-16T13:00:19,098 reading manifest file '/tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/SOURCES.txt' 2024-05-16T13:00:19,100 reading manifest template 'MANIFEST.in' 2024-05-16T13:00:19,102 warning: no previously-included files matching '*.py[co]' found anywhere in distribution 2024-05-16T13:00:19,102 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2024-05-16T13:00:19,103 adding license file 'LICENSE-BSD.txt' 2024-05-16T13:00:19,104 adding license file 'LICENSE-LGPL.txt' 2024-05-16T13:00:19,104 adding license file 'AUTHORS.md' 2024-05-16T13:00:19,112 writing manifest file '/tmp/pip-modern-metadata-ter02l6g/TMD.egg-info/SOURCES.txt' 2024-05-16T13:00:19,113 creating '/tmp/pip-modern-metadata-ter02l6g/TMD-2.4.3.dist-info' 2024-05-16T13:00:19,299 Preparing metadata (pyproject.toml): finished with status 'done' 2024-05-16T13:00:19,303 Source in /tmp/pip-wheel-fgcaoruu/tmd_95d332d4cf1048f09135cf59d5fdc80d has version 2.4.3, which satisfies requirement tmd==2.4.3 from https://files.pythonhosted.org/packages/12/b4/33ec0c71409c29459e5e7b87f891a8c2e447aed2c0f578a806604fae8a78/tmd-2.4.3.tar.gz 2024-05-16T13:00:19,304 Removed tmd==2.4.3 from https://files.pythonhosted.org/packages/12/b4/33ec0c71409c29459e5e7b87f891a8c2e447aed2c0f578a806604fae8a78/tmd-2.4.3.tar.gz from build tracker '/tmp/pip-build-tracker-g4pu5hyq' 2024-05-16T13:00:19,310 Created temporary directory: /tmp/pip-unpack-49opwlbg 2024-05-16T13:00:19,311 Created temporary directory: /tmp/pip-unpack-_hkqrk1m 2024-05-16T13:00:19,351 Building wheels for collected packages: tmd 2024-05-16T13:00:19,355 Created temporary directory: /tmp/pip-wheel-nfk1g2ny 2024-05-16T13:00:19,356 Destination directory: /tmp/pip-wheel-nfk1g2ny 2024-05-16T13:00:19,358 Building wheel for tmd (pyproject.toml): started 2024-05-16T13:00:19,359 Running command Building wheel for tmd (pyproject.toml) 2024-05-16T13:00:20,005 running bdist_wheel 2024-05-16T13:00:20,057 running build 2024-05-16T13:00:20,057 running build_py 2024-05-16T13:00:20,065 creating build 2024-05-16T13:00:20,066 creating build/lib 2024-05-16T13:00:20,067 creating build/lib/tmd 2024-05-16T13:00:20,068 copying tmd/utils.py -> build/lib/tmd 2024-05-16T13:00:20,069 copying tmd/__init__.py -> build/lib/tmd 2024-05-16T13:00:20,072 creating build/lib/tmd/io 2024-05-16T13:00:20,072 copying tmd/io/conversion.py -> build/lib/tmd/io 2024-05-16T13:00:20,074 copying tmd/io/h5.py -> build/lib/tmd/io 2024-05-16T13:00:20,077 copying tmd/io/swc.py -> build/lib/tmd/io 2024-05-16T13:00:20,079 copying tmd/io/__init__.py -> build/lib/tmd/io 2024-05-16T13:00:20,081 copying tmd/io/io.py -> build/lib/tmd/io 2024-05-16T13:00:20,083 creating build/lib/tmd/Population 2024-05-16T13:00:20,084 copying tmd/Population/Population.py -> build/lib/tmd/Population 2024-05-16T13:00:20,086 copying tmd/Population/__init__.py -> build/lib/tmd/Population 2024-05-16T13:00:20,088 creating build/lib/tmd/Soma 2024-05-16T13:00:20,089 copying tmd/Soma/methods.py -> build/lib/tmd/Soma 2024-05-16T13:00:20,090 copying tmd/Soma/Soma.py -> build/lib/tmd/Soma 2024-05-16T13:00:20,092 copying tmd/Soma/__init__.py -> build/lib/tmd/Soma 2024-05-16T13:00:20,094 creating build/lib/tmd/Topology 2024-05-16T13:00:20,095 copying tmd/Topology/persistent_properties.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,097 copying tmd/Topology/analysis.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,100 copying tmd/Topology/transformations.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,101 copying tmd/Topology/distances.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,103 copying tmd/Topology/vectorizations.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,105 copying tmd/Topology/statistics.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,106 copying tmd/Topology/methods.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,108 copying tmd/Topology/__init__.py -> build/lib/tmd/Topology 2024-05-16T13:00:20,111 creating build/lib/tmd/Tree 2024-05-16T13:00:20,112 copying tmd/Tree/Tree.py -> build/lib/tmd/Tree 2024-05-16T13:00:20,114 copying tmd/Tree/methods.py -> build/lib/tmd/Tree 2024-05-16T13:00:20,116 copying tmd/Tree/__init__.py -> build/lib/tmd/Tree 2024-05-16T13:00:20,118 creating build/lib/tmd/Neuron 2024-05-16T13:00:20,120 copying tmd/Neuron/Neuron.py -> build/lib/tmd/Neuron 2024-05-16T13:00:20,122 copying tmd/Neuron/methods.py -> build/lib/tmd/Neuron 2024-05-16T13:00:20,124 copying tmd/Neuron/__init__.py -> build/lib/tmd/Neuron 2024-05-16T13:00:20,126 creating build/lib/tmd/view 2024-05-16T13:00:20,127 copying tmd/view/plot.py -> build/lib/tmd/view 2024-05-16T13:00:20,130 copying tmd/view/view.py -> build/lib/tmd/view 2024-05-16T13:00:20,133 copying tmd/view/common.py -> build/lib/tmd/view 2024-05-16T13:00:20,135 copying tmd/view/__init__.py -> build/lib/tmd/view 2024-05-16T13:00:20,137 running egg_info 2024-05-16T13:00:20,142 writing TMD.egg-info/PKG-INFO 2024-05-16T13:00:20,148 writing dependency_links to TMD.egg-info/dependency_links.txt 2024-05-16T13:00:20,152 writing requirements to TMD.egg-info/requires.txt 2024-05-16T13:00:20,154 writing top-level names to TMD.egg-info/top_level.txt 2024-05-16T13:00:20,189 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-16T13:00:20,192 reading manifest file 'TMD.egg-info/SOURCES.txt' 2024-05-16T13:00:20,204 reading manifest template 'MANIFEST.in' 2024-05-16T13:00:20,206 warning: no previously-included files matching '*.py[co]' found anywhere in distribution 2024-05-16T13:00:20,206 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2024-05-16T13:00:20,207 adding license file 'LICENSE-BSD.txt' 2024-05-16T13:00:20,207 adding license file 'LICENSE-LGPL.txt' 2024-05-16T13:00:20,208 adding license file 'AUTHORS.md' 2024-05-16T13:00:20,212 writing manifest file 'TMD.egg-info/SOURCES.txt' 2024-05-16T13:00:20,234 installing to build/bdist.linux-armv7l/wheel 2024-05-16T13:00:20,234 running install 2024-05-16T13:00:20,258 running install_lib 2024-05-16T13:00:20,266 creating build/bdist.linux-armv7l 2024-05-16T13:00:20,266 creating build/bdist.linux-armv7l/wheel 2024-05-16T13:00:20,267 creating build/bdist.linux-armv7l/wheel/tmd 2024-05-16T13:00:20,269 creating build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,270 copying build/lib/tmd/io/conversion.py -> build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,272 copying build/lib/tmd/io/h5.py -> build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,274 copying build/lib/tmd/io/swc.py -> build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,276 copying build/lib/tmd/io/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,278 copying build/lib/tmd/io/io.py -> build/bdist.linux-armv7l/wheel/tmd/io 2024-05-16T13:00:20,281 creating build/bdist.linux-armv7l/wheel/tmd/Population 2024-05-16T13:00:20,282 copying build/lib/tmd/Population/Population.py -> build/bdist.linux-armv7l/wheel/tmd/Population 2024-05-16T13:00:20,284 copying build/lib/tmd/Population/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/Population 2024-05-16T13:00:20,286 copying build/lib/tmd/utils.py -> build/bdist.linux-armv7l/wheel/tmd 2024-05-16T13:00:20,287 creating build/bdist.linux-armv7l/wheel/tmd/Soma 2024-05-16T13:00:20,288 copying build/lib/tmd/Soma/methods.py -> build/bdist.linux-armv7l/wheel/tmd/Soma 2024-05-16T13:00:20,290 copying build/lib/tmd/Soma/Soma.py -> build/bdist.linux-armv7l/wheel/tmd/Soma 2024-05-16T13:00:20,292 copying build/lib/tmd/Soma/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/Soma 2024-05-16T13:00:20,295 creating build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,295 copying build/lib/tmd/Topology/persistent_properties.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,298 copying build/lib/tmd/Topology/analysis.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,300 copying build/lib/tmd/Topology/transformations.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,302 copying build/lib/tmd/Topology/distances.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,304 copying build/lib/tmd/Topology/vectorizations.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,306 copying build/lib/tmd/Topology/statistics.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,308 copying build/lib/tmd/Topology/methods.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,310 copying build/lib/tmd/Topology/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/Topology 2024-05-16T13:00:20,312 creating build/bdist.linux-armv7l/wheel/tmd/Tree 2024-05-16T13:00:20,313 copying build/lib/tmd/Tree/Tree.py -> build/bdist.linux-armv7l/wheel/tmd/Tree 2024-05-16T13:00:20,315 copying build/lib/tmd/Tree/methods.py -> build/bdist.linux-armv7l/wheel/tmd/Tree 2024-05-16T13:00:20,318 copying build/lib/tmd/Tree/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/Tree 2024-05-16T13:00:20,320 creating build/bdist.linux-armv7l/wheel/tmd/Neuron 2024-05-16T13:00:20,320 copying build/lib/tmd/Neuron/Neuron.py -> build/bdist.linux-armv7l/wheel/tmd/Neuron 2024-05-16T13:00:20,323 copying build/lib/tmd/Neuron/methods.py -> build/bdist.linux-armv7l/wheel/tmd/Neuron 2024-05-16T13:00:20,324 copying build/lib/tmd/Neuron/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/Neuron 2024-05-16T13:00:20,326 creating build/bdist.linux-armv7l/wheel/tmd/view 2024-05-16T13:00:20,327 copying build/lib/tmd/view/plot.py -> build/bdist.linux-armv7l/wheel/tmd/view 2024-05-16T13:00:20,329 copying build/lib/tmd/view/view.py -> build/bdist.linux-armv7l/wheel/tmd/view 2024-05-16T13:00:20,332 copying build/lib/tmd/view/common.py -> build/bdist.linux-armv7l/wheel/tmd/view 2024-05-16T13:00:20,335 copying build/lib/tmd/view/__init__.py -> build/bdist.linux-armv7l/wheel/tmd/view 2024-05-16T13:00:20,337 copying build/lib/tmd/__init__.py -> build/bdist.linux-armv7l/wheel/tmd 2024-05-16T13:00:20,338 running install_egg_info 2024-05-16T13:00:20,347 Copying TMD.egg-info to build/bdist.linux-armv7l/wheel/TMD-2.4.3-py3.11.egg-info 2024-05-16T13:00:20,357 running install_scripts 2024-05-16T13:00:20,377 creating build/bdist.linux-armv7l/wheel/TMD-2.4.3.dist-info/WHEEL 2024-05-16T13:00:20,380 creating '/tmp/pip-wheel-nfk1g2ny/.tmp-4xzuaqpt/TMD-2.4.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-16T13:00:20,383 adding 'tmd/__init__.py' 2024-05-16T13:00:20,384 adding 'tmd/utils.py' 2024-05-16T13:00:20,386 adding 'tmd/Neuron/Neuron.py' 2024-05-16T13:00:20,388 adding 'tmd/Neuron/__init__.py' 2024-05-16T13:00:20,389 adding 'tmd/Neuron/methods.py' 2024-05-16T13:00:20,391 adding 'tmd/Population/Population.py' 2024-05-16T13:00:20,393 adding 'tmd/Population/__init__.py' 2024-05-16T13:00:20,395 adding 'tmd/Soma/Soma.py' 2024-05-16T13:00:20,396 adding 'tmd/Soma/__init__.py' 2024-05-16T13:00:20,398 adding 'tmd/Soma/methods.py' 2024-05-16T13:00:20,400 adding 'tmd/Topology/__init__.py' 2024-05-16T13:00:20,402 adding 'tmd/Topology/analysis.py' 2024-05-16T13:00:20,403 adding 'tmd/Topology/distances.py' 2024-05-16T13:00:20,405 adding 'tmd/Topology/methods.py' 2024-05-16T13:00:20,407 adding 'tmd/Topology/persistent_properties.py' 2024-05-16T13:00:20,408 adding 'tmd/Topology/statistics.py' 2024-05-16T13:00:20,410 adding 'tmd/Topology/transformations.py' 2024-05-16T13:00:20,412 adding 'tmd/Topology/vectorizations.py' 2024-05-16T13:00:20,414 adding 'tmd/Tree/Tree.py' 2024-05-16T13:00:20,415 adding 'tmd/Tree/__init__.py' 2024-05-16T13:00:20,417 adding 'tmd/Tree/methods.py' 2024-05-16T13:00:20,419 adding 'tmd/io/__init__.py' 2024-05-16T13:00:20,421 adding 'tmd/io/conversion.py' 2024-05-16T13:00:20,423 adding 'tmd/io/h5.py' 2024-05-16T13:00:20,424 adding 'tmd/io/io.py' 2024-05-16T13:00:20,426 adding 'tmd/io/swc.py' 2024-05-16T13:00:20,428 adding 'tmd/view/__init__.py' 2024-05-16T13:00:20,431 adding 'tmd/view/common.py' 2024-05-16T13:00:20,433 adding 'tmd/view/plot.py' 2024-05-16T13:00:20,437 adding 'tmd/view/view.py' 2024-05-16T13:00:20,438 adding 'TMD-2.4.3.dist-info/AUTHORS.md' 2024-05-16T13:00:20,439 adding 'TMD-2.4.3.dist-info/LICENSE-BSD.txt' 2024-05-16T13:00:20,441 adding 'TMD-2.4.3.dist-info/LICENSE-LGPL.txt' 2024-05-16T13:00:20,442 adding 'TMD-2.4.3.dist-info/METADATA' 2024-05-16T13:00:20,444 adding 'TMD-2.4.3.dist-info/WHEEL' 2024-05-16T13:00:20,445 adding 'TMD-2.4.3.dist-info/top_level.txt' 2024-05-16T13:00:20,446 adding 'TMD-2.4.3.dist-info/RECORD' 2024-05-16T13:00:20,448 removing build/bdist.linux-armv7l/wheel 2024-05-16T13:00:20,561 Building wheel for tmd (pyproject.toml): finished with status 'done' 2024-05-16T13:00:20,567 Created wheel for tmd: filename=TMD-2.4.3-py3-none-any.whl size=59045 sha256=407192266df7c93b9ac74557fab3b31abf15b8f22c8641eb4cb825e1e6f6a16b 2024-05-16T13:00:20,568 Stored in directory: /tmp/pip-ephem-wheel-cache-4iq112y7/wheels/f1/e3/88/e8621966b0d7a48327135a661ba89ff40673cddeb7625ae7ec 2024-05-16T13:00:20,580 Successfully built tmd 2024-05-16T13:00:20,586 Removed build tracker: '/tmp/pip-build-tracker-g4pu5hyq'