2024-05-17T09:30:16,766 Created temporary directory: /tmp/pip-build-tracker-6m0jddxc 2024-05-17T09:30:16,767 Initialized build tracking at /tmp/pip-build-tracker-6m0jddxc 2024-05-17T09:30:16,768 Created build tracker: /tmp/pip-build-tracker-6m0jddxc 2024-05-17T09:30:16,768 Entered build tracker: /tmp/pip-build-tracker-6m0jddxc 2024-05-17T09:30:16,769 Created temporary directory: /tmp/pip-wheel-kivz4pak 2024-05-17T09:30:16,773 Created temporary directory: /tmp/pip-ephem-wheel-cache-r308n2_7 2024-05-17T09:30:16,795 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-17T09:30:16,800 2 location(s) to search for versions of funvip: 2024-05-17T09:30:16,800 * https://pypi.org/simple/funvip/ 2024-05-17T09:30:16,800 * https://www.piwheels.org/simple/funvip/ 2024-05-17T09:30:16,800 Fetching project page and analyzing links: https://pypi.org/simple/funvip/ 2024-05-17T09:30:16,801 Getting page https://pypi.org/simple/funvip/ 2024-05-17T09:30:16,803 Found index url https://pypi.org/simple/ 2024-05-17T09:30:17,016 Fetched page https://pypi.org/simple/funvip/ as application/vnd.pypi.simple.v1+json 2024-05-17T09:30:17,018 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/a0/b5/0d65eb17b155c93a7022978aa4521fa29d234a099409863a5b08a8e7e122/FunVIP-0.3.20-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8) 2024-05-17T09:30:17,019 Found link https://files.pythonhosted.org/packages/9b/df/34c36f5642250c040b8ef6fd2f6c11699fe52dca76ef2697e566a4101185/funvip-0.3.20.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8), version: 0.3.20 2024-05-17T09:30:17,020 Fetching project page and analyzing links: https://www.piwheels.org/simple/funvip/ 2024-05-17T09:30:17,020 Getting page https://www.piwheels.org/simple/funvip/ 2024-05-17T09:30:17,022 Found index url https://www.piwheels.org/simple/ 2024-05-17T09:30:17,395 Fetched page https://www.piwheels.org/simple/funvip/ as text/html 2024-05-17T09:30:17,396 Skipping link: not a file: https://www.piwheels.org/simple/funvip/ 2024-05-17T09:30:17,397 Skipping link: not a file: https://pypi.org/simple/funvip/ 2024-05-17T09:30:17,423 Given no hashes to check 1 links for project 'funvip': discarding no candidates 2024-05-17T09:30:17,450 Collecting funvip==0.3.20 2024-05-17T09:30:17,453 Created temporary directory: /tmp/pip-unpack-9a_hxq23 2024-05-17T09:30:17,692 Downloading funvip-0.3.20.tar.gz (104 kB) 2024-05-17T09:30:17,860 Added funvip==0.3.20 from https://files.pythonhosted.org/packages/9b/df/34c36f5642250c040b8ef6fd2f6c11699fe52dca76ef2697e566a4101185/funvip-0.3.20.tar.gz to build tracker '/tmp/pip-build-tracker-6m0jddxc' 2024-05-17T09:30:17,864 Created temporary directory: /tmp/pip-build-env-xfmb5_8d 2024-05-17T09:30:17,868 Installing build dependencies: started 2024-05-17T09:30:17,870 Running command pip subprocess to install build dependencies 2024-05-17T09:30:18,993 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-17T09:30:19,467 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-17T09:30:19,953 Collecting setuptools-ext 2024-05-17T09:30:19,967 Downloading https://www.piwheels.org/simple/setuptools-ext/setuptools_ext-0.9-py3-none-any.whl (7.2 kB) 2024-05-17T09:30:21,730 Collecting setuptools>=68.2.0 (from setuptools-ext) 2024-05-17T09:30:21,746 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-05-17T09:30:24,374 Installing collected packages: setuptools, setuptools-ext 2024-05-17T09:30:26,884 Successfully installed setuptools-69.5.1 setuptools-ext-0.9 2024-05-17T09:30:27,399 Installing build dependencies: finished with status 'done' 2024-05-17T09:30:27,402 Getting requirements to build wheel: started 2024-05-17T09:30:27,403 Running command Getting requirements to build wheel 2024-05-17T09:30:28,245 running egg_info 2024-05-17T09:30:28,249 writing funvip/FunVIP.egg-info/PKG-INFO 2024-05-17T09:30:28,252 writing dependency_links to funvip/FunVIP.egg-info/dependency_links.txt 2024-05-17T09:30:28,255 writing entry points to funvip/FunVIP.egg-info/entry_points.txt 2024-05-17T09:30:28,257 writing requirements to funvip/FunVIP.egg-info/requires.txt 2024-05-17T09:30:28,258 writing top-level names to funvip/FunVIP.egg-info/top_level.txt 2024-05-17T09:30:28,277 reading manifest file 'funvip/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:28,279 adding license file 'LICENSE' 2024-05-17T09:30:28,282 writing manifest file 'funvip/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:28,397 Getting requirements to build wheel: finished with status 'done' 2024-05-17T09:30:28,406 Installing backend dependencies: started 2024-05-17T09:30:28,407 Running command pip subprocess to install backend dependencies 2024-05-17T09:30:29,608 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-17T09:30:30,110 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-17T09:30:30,709 Collecting wheel 2024-05-17T09:30:30,727 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-05-17T09:30:33,006 Installing collected packages: wheel 2024-05-17T09:30:33,230 Creating /tmp/pip-build-env-xfmb5_8d/normal/local/bin 2024-05-17T09:30:33,232 changing mode of /tmp/pip-build-env-xfmb5_8d/normal/local/bin/wheel to 755 2024-05-17T09:30:33,244 Successfully installed wheel-0.43.0 2024-05-17T09:30:33,738 Installing backend dependencies: finished with status 'done' 2024-05-17T09:30:33,739 Created temporary directory: /tmp/pip-modern-metadata-_xee1gde 2024-05-17T09:30:33,741 Preparing metadata (pyproject.toml): started 2024-05-17T09:30:33,743 Running command Preparing metadata (pyproject.toml) 2024-05-17T09:30:34,551 running dist_info 2024-05-17T09:30:34,555 creating /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info 2024-05-17T09:30:34,559 writing /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/PKG-INFO 2024-05-17T09:30:34,563 writing dependency_links to /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/dependency_links.txt 2024-05-17T09:30:34,565 writing entry points to /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/entry_points.txt 2024-05-17T09:30:34,567 writing requirements to /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/requires.txt 2024-05-17T09:30:34,568 writing top-level names to /tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/top_level.txt 2024-05-17T09:30:34,570 writing manifest file '/tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:34,591 reading manifest file '/tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:34,593 adding license file 'LICENSE' 2024-05-17T09:30:34,596 writing manifest file '/tmp/pip-modern-metadata-_xee1gde/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:34,597 creating '/tmp/pip-modern-metadata-_xee1gde/FunVIP-0.3.20.dist-info' 2024-05-17T09:30:34,755 Preparing metadata (pyproject.toml): finished with status 'done' 2024-05-17T09:30:34,760 Source in /tmp/pip-wheel-kivz4pak/funvip_2f323a7b14724663a85c60faaa5e288e has version 0.3.20, which satisfies requirement funvip==0.3.20 from https://files.pythonhosted.org/packages/9b/df/34c36f5642250c040b8ef6fd2f6c11699fe52dca76ef2697e566a4101185/funvip-0.3.20.tar.gz 2024-05-17T09:30:34,760 Removed funvip==0.3.20 from https://files.pythonhosted.org/packages/9b/df/34c36f5642250c040b8ef6fd2f6c11699fe52dca76ef2697e566a4101185/funvip-0.3.20.tar.gz from build tracker '/tmp/pip-build-tracker-6m0jddxc' 2024-05-17T09:30:34,766 Created temporary directory: /tmp/pip-unpack-6_l0fnok 2024-05-17T09:30:34,767 Created temporary directory: /tmp/pip-unpack-zm5oa1aa 2024-05-17T09:30:34,795 Building wheels for collected packages: funvip 2024-05-17T09:30:34,799 Created temporary directory: /tmp/pip-wheel-7snuy4gb 2024-05-17T09:30:34,799 Destination directory: /tmp/pip-wheel-7snuy4gb 2024-05-17T09:30:34,802 Building wheel for funvip (pyproject.toml): started 2024-05-17T09:30:34,803 Running command Building wheel for funvip (pyproject.toml) 2024-05-17T09:30:35,562 running bdist_wheel 2024-05-17T09:30:35,578 running build 2024-05-17T09:30:35,578 running build_py 2024-05-17T09:30:35,582 creating build 2024-05-17T09:30:35,583 creating build/lib 2024-05-17T09:30:35,584 creating build/lib/data 2024-05-17T09:30:35,585 copying funvip/data/__init__.py -> build/lib/data 2024-05-17T09:30:35,587 creating build/lib/src 2024-05-17T09:30:35,588 copying funvip/src/logger.py -> build/lib/src 2024-05-17T09:30:35,590 copying funvip/src/dataset.py -> build/lib/src 2024-05-17T09:30:35,592 copying funvip/src/tree_interpretation.py -> build/lib/src 2024-05-17T09:30:35,595 copying funvip/src/reporter.py -> build/lib/src 2024-05-17T09:30:35,598 copying funvip/src/logics.py -> build/lib/src 2024-05-17T09:30:35,600 copying funvip/src/validation.py -> build/lib/src 2024-05-17T09:30:35,602 copying funvip/src/validate_input.py -> build/lib/src 2024-05-17T09:30:35,604 copying funvip/src/validate_option.py -> build/lib/src 2024-05-17T09:30:35,608 copying funvip/src/initialize.py -> build/lib/src 2024-05-17T09:30:35,610 copying funvip/src/hasher.py -> build/lib/src 2024-05-17T09:30:35,611 copying funvip/src/save.py -> build/lib/src 2024-05-17T09:30:35,613 copying funvip/src/command.py -> build/lib/src 2024-05-17T09:30:35,616 copying funvip/src/concatenate.py -> build/lib/src 2024-05-17T09:30:35,619 copying funvip/src/patch.py -> build/lib/src 2024-05-17T09:30:35,621 copying funvip/src/ext.py -> build/lib/src 2024-05-17T09:30:35,623 copying funvip/src/opt_generator.py -> build/lib/src 2024-05-17T09:30:35,625 copying funvip/src/tree_interpretation_pipe.py -> build/lib/src 2024-05-17T09:30:35,627 copying funvip/src/__init__.py -> build/lib/src 2024-05-17T09:30:35,629 copying funvip/src/ncbi.py -> build/lib/src 2024-05-17T09:30:35,631 copying funvip/src/tree.py -> build/lib/src 2024-05-17T09:30:35,634 copying funvip/src/trim.py -> build/lib/src 2024-05-17T09:30:35,636 copying funvip/src/search.py -> build/lib/src 2024-05-17T09:30:35,638 copying funvip/src/align.py -> build/lib/src 2024-05-17T09:30:35,641 copying funvip/src/version.py -> build/lib/src 2024-05-17T09:30:35,643 copying funvip/src/cluster.py -> build/lib/src 2024-05-17T09:30:35,646 copying funvip/src/modeltest.py -> build/lib/src 2024-05-17T09:30:35,648 copying funvip/src/tool.py -> build/lib/src 2024-05-17T09:30:35,651 creating build/lib/external 2024-05-17T09:30:35,653 copying funvip/external/__init__.py -> build/lib/external 2024-05-17T09:30:35,655 creating build/lib/external/BLAST_Windows 2024-05-17T09:30:35,656 creating build/lib/external/BLAST_Windows/bin 2024-05-17T09:30:35,658 copying funvip/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/external/BLAST_Windows/bin 2024-05-17T09:30:35,660 running egg_info 2024-05-17T09:30:35,664 writing funvip/FunVIP.egg-info/PKG-INFO 2024-05-17T09:30:35,667 writing dependency_links to funvip/FunVIP.egg-info/dependency_links.txt 2024-05-17T09:30:35,669 writing entry points to funvip/FunVIP.egg-info/entry_points.txt 2024-05-17T09:30:35,672 writing requirements to funvip/FunVIP.egg-info/requires.txt 2024-05-17T09:30:35,673 writing top-level names to funvip/FunVIP.egg-info/top_level.txt 2024-05-17T09:30:35,684 reading manifest file 'funvip/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:35,686 adding license file 'LICENSE' 2024-05-17T09:30:35,689 writing manifest file 'funvip/FunVIP.egg-info/SOURCES.txt' 2024-05-17T09:30:35,702 installing to build/bdist.linux-armv7l/wheel 2024-05-17T09:30:35,703 running install 2024-05-17T09:30:35,727 running install_lib 2024-05-17T09:30:35,732 creating build/bdist.linux-armv7l 2024-05-17T09:30:35,733 creating build/bdist.linux-armv7l/wheel 2024-05-17T09:30:35,735 creating build/bdist.linux-armv7l/wheel/data 2024-05-17T09:30:35,736 copying build/lib/data/__init__.py -> build/bdist.linux-armv7l/wheel/data 2024-05-17T09:30:35,739 creating build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,740 copying build/lib/src/logger.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,742 copying build/lib/src/dataset.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,745 copying build/lib/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,749 copying build/lib/src/reporter.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,752 copying build/lib/src/logics.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,754 copying build/lib/src/validation.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,756 copying build/lib/src/validate_input.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,759 copying build/lib/src/validate_option.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,762 copying build/lib/src/initialize.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,764 copying build/lib/src/hasher.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,766 copying build/lib/src/save.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,769 copying build/lib/src/command.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,771 copying build/lib/src/concatenate.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,774 copying build/lib/src/patch.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,776 copying build/lib/src/ext.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,779 copying build/lib/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,781 copying build/lib/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,784 copying build/lib/src/__init__.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,786 copying build/lib/src/ncbi.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,788 copying build/lib/src/tree.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,791 copying build/lib/src/trim.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,793 copying build/lib/src/search.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,795 copying build/lib/src/align.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,798 copying build/lib/src/version.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,800 copying build/lib/src/cluster.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,802 copying build/lib/src/modeltest.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,805 copying build/lib/src/tool.py -> build/bdist.linux-armv7l/wheel/src 2024-05-17T09:30:35,807 creating build/bdist.linux-armv7l/wheel/external 2024-05-17T09:30:35,808 copying build/lib/external/__init__.py -> build/bdist.linux-armv7l/wheel/external 2024-05-17T09:30:35,810 creating build/bdist.linux-armv7l/wheel/external/BLAST_Windows 2024-05-17T09:30:35,811 creating build/bdist.linux-armv7l/wheel/external/BLAST_Windows/bin 2024-05-17T09:30:35,812 copying build/lib/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/external/BLAST_Windows/bin 2024-05-17T09:30:35,814 running install_egg_info 2024-05-17T09:30:35,818 Copying funvip/FunVIP.egg-info to build/bdist.linux-armv7l/wheel/FunVIP-0.3.20-py3.11.egg-info 2024-05-17T09:30:35,829 running install_scripts 2024-05-17T09:30:35,848 creating build/bdist.linux-armv7l/wheel/FunVIP-0.3.20.dist-info/WHEEL 2024-05-17T09:30:35,850 creating '/tmp/pip-wheel-7snuy4gb/.tmp-56ye0x7h/FunVIP-0.3.20-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-17T09:30:35,853 adding 'data/__init__.py' 2024-05-17T09:30:35,855 adding 'external/__init__.py' 2024-05-17T09:30:35,858 adding 'external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2024-05-17T09:30:35,860 adding 'src/__init__.py' 2024-05-17T09:30:35,861 adding 'src/align.py' 2024-05-17T09:30:35,864 adding 'src/cluster.py' 2024-05-17T09:30:35,867 adding 'src/command.py' 2024-05-17T09:30:35,869 adding 'src/concatenate.py' 2024-05-17T09:30:35,872 adding 'src/dataset.py' 2024-05-17T09:30:35,875 adding 'src/ext.py' 2024-05-17T09:30:35,876 adding 'src/hasher.py' 2024-05-17T09:30:35,878 adding 'src/initialize.py' 2024-05-17T09:30:35,879 adding 'src/logger.py' 2024-05-17T09:30:35,881 adding 'src/logics.py' 2024-05-17T09:30:35,883 adding 'src/modeltest.py' 2024-05-17T09:30:35,884 adding 'src/ncbi.py' 2024-05-17T09:30:35,886 adding 'src/opt_generator.py' 2024-05-17T09:30:35,888 adding 'src/patch.py' 2024-05-17T09:30:35,892 adding 'src/reporter.py' 2024-05-17T09:30:35,893 adding 'src/save.py' 2024-05-17T09:30:35,896 adding 'src/search.py' 2024-05-17T09:30:35,898 adding 'src/tool.py' 2024-05-17T09:30:35,899 adding 'src/tree.py' 2024-05-17T09:30:35,905 adding 'src/tree_interpretation.py' 2024-05-17T09:30:35,909 adding 'src/tree_interpretation_pipe.py' 2024-05-17T09:30:35,910 adding 'src/trim.py' 2024-05-17T09:30:35,914 adding 'src/validate_input.py' 2024-05-17T09:30:35,920 adding 'src/validate_option.py' 2024-05-17T09:30:35,922 adding 'src/validation.py' 2024-05-17T09:30:35,924 adding 'src/version.py' 2024-05-17T09:30:35,930 adding 'FunVIP-0.3.20.dist-info/LICENSE' 2024-05-17T09:30:35,931 adding 'FunVIP-0.3.20.dist-info/METADATA' 2024-05-17T09:30:35,932 adding 'FunVIP-0.3.20.dist-info/WHEEL' 2024-05-17T09:30:35,933 adding 'FunVIP-0.3.20.dist-info/entry_points.txt' 2024-05-17T09:30:35,934 adding 'FunVIP-0.3.20.dist-info/top_level.txt' 2024-05-17T09:30:35,935 adding 'FunVIP-0.3.20.dist-info/RECORD' 2024-05-17T09:30:35,938 removing build/bdist.linux-armv7l/wheel 2024-05-17T09:30:36,128 Building wheel for funvip (pyproject.toml): finished with status 'done' 2024-05-17T09:30:36,133 Created wheel for funvip: filename=FunVIP-0.3.20-py3-none-any.whl size=111718 sha256=c93795ba7644b586c23cea4f5a6c421915b36ff5f5be700ee1a37d7857f03e3b 2024-05-17T09:30:36,134 Stored in directory: /tmp/pip-ephem-wheel-cache-r308n2_7/wheels/67/ec/86/20b8c07c3e963ce7b205fc92c01c0427443d7904f4dee3af40 2024-05-17T09:30:36,146 Successfully built funvip 2024-05-17T09:30:36,152 Removed build tracker: '/tmp/pip-build-tracker-6m0jddxc'