2024-05-20T13:57:55,092 Created temporary directory: /tmp/pip-build-tracker-c3_dlfei 2024-05-20T13:57:55,093 Initialized build tracking at /tmp/pip-build-tracker-c3_dlfei 2024-05-20T13:57:55,094 Created build tracker: /tmp/pip-build-tracker-c3_dlfei 2024-05-20T13:57:55,094 Entered build tracker: /tmp/pip-build-tracker-c3_dlfei 2024-05-20T13:57:55,095 Created temporary directory: /tmp/pip-wheel-nq_0zyo3 2024-05-20T13:57:55,098 Created temporary directory: /tmp/pip-ephem-wheel-cache-id_osyod 2024-05-20T13:57:55,120 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-20T13:57:55,123 2 location(s) to search for versions of plantdrppred: 2024-05-20T13:57:55,123 * https://pypi.org/simple/plantdrppred/ 2024-05-20T13:57:55,123 * https://www.piwheels.org/simple/plantdrppred/ 2024-05-20T13:57:55,124 Fetching project page and analyzing links: https://pypi.org/simple/plantdrppred/ 2024-05-20T13:57:55,125 Getting page https://pypi.org/simple/plantdrppred/ 2024-05-20T13:57:55,126 Found index url https://pypi.org/simple/ 2024-05-20T13:57:55,261 Fetched page https://pypi.org/simple/plantdrppred/ as application/vnd.pypi.simple.v1+json 2024-05-20T13:57:55,262 Skipping link: No binaries permitted for plantdrppred: https://files.pythonhosted.org/packages/8e/12/422c3f7b873e876f9c94bce5cd6f12c6b877f590c15aa8756811a512a666/plantdrppred-0.1-py3-none-any.whl (from https://pypi.org/simple/plantdrppred/) (requires-python:>=3.8) 2024-05-20T13:57:55,263 Found link https://files.pythonhosted.org/packages/a2/58/f5939286f6f6d12843cebdd3ed83dfa2f2172e2842197885a067e20ef0fd/plantdrppred-0.1.tar.gz (from https://pypi.org/simple/plantdrppred/) (requires-python:>=3.8), version: 0.1 2024-05-20T13:57:55,264 Skipping link: No binaries permitted for plantdrppred: https://files.pythonhosted.org/packages/7e/ba/794ccc06e09257cf61d72c2d7b405f4e50aa975a8912b5b1b57bc2b27fb8/plantdrppred-0.2-py3-none-any.whl (from https://pypi.org/simple/plantdrppred/) (requires-python:>=3.8) 2024-05-20T13:57:55,265 Found link https://files.pythonhosted.org/packages/2a/8e/123ac1de9868e9c1bb0d84a0e721f8eb6db22596c47e34fcd9cc6db7e54d/plantdrppred-0.2.tar.gz (from https://pypi.org/simple/plantdrppred/) (requires-python:>=3.8), version: 0.2 2024-05-20T13:57:55,266 Fetching project page and analyzing links: https://www.piwheels.org/simple/plantdrppred/ 2024-05-20T13:57:55,267 Getting page https://www.piwheels.org/simple/plantdrppred/ 2024-05-20T13:57:55,268 Found index url https://www.piwheels.org/simple/ 2024-05-20T13:57:55,420 Fetched page https://www.piwheels.org/simple/plantdrppred/ as text/html 2024-05-20T13:57:55,421 Skipping link: not a file: https://www.piwheels.org/simple/plantdrppred/ 2024-05-20T13:57:55,422 Skipping link: not a file: https://pypi.org/simple/plantdrppred/ 2024-05-20T13:57:55,441 Given no hashes to check 1 links for project 'plantdrppred': discarding no candidates 2024-05-20T13:57:55,459 Collecting plantdrppred==0.2 2024-05-20T13:57:55,461 Created temporary directory: /tmp/pip-unpack-3gj_152g 2024-05-20T13:57:55,674 Downloading plantdrppred-0.2.tar.gz (61.2 MB) 2024-05-20T13:58:12,341 Added plantdrppred==0.2 from https://files.pythonhosted.org/packages/2a/8e/123ac1de9868e9c1bb0d84a0e721f8eb6db22596c47e34fcd9cc6db7e54d/plantdrppred-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-c3_dlfei' 2024-05-20T13:58:12,343 Running setup.py (path:/tmp/pip-wheel-nq_0zyo3/plantdrppred_e9d8e37035ef4bdd96024552f16b11e8/setup.py) egg_info for package plantdrppred 2024-05-20T13:58:12,344 Created temporary directory: /tmp/pip-pip-egg-info-3rruybc4 2024-05-20T13:58:12,344 Preparing metadata (setup.py): started 2024-05-20T13:58:12,346 Running command python setup.py egg_info 2024-05-20T13:58:13,430 running egg_info 2024-05-20T13:58:13,432 creating /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info 2024-05-20T13:58:13,458 writing /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/PKG-INFO 2024-05-20T13:58:13,461 writing dependency_links to /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/dependency_links.txt 2024-05-20T13:58:13,463 writing entry points to /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/entry_points.txt 2024-05-20T13:58:13,464 writing requirements to /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/requires.txt 2024-05-20T13:58:13,465 writing top-level names to /tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/top_level.txt 2024-05-20T13:58:13,467 writing manifest file '/tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/SOURCES.txt' 2024-05-20T13:58:13,561 reading manifest file '/tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/SOURCES.txt' 2024-05-20T13:58:13,563 adding license file 'LICENSE' 2024-05-20T13:58:13,565 writing manifest file '/tmp/pip-pip-egg-info-3rruybc4/plantdrppred.egg-info/SOURCES.txt' 2024-05-20T13:58:13,681 Preparing metadata (setup.py): finished with status 'done' 2024-05-20T13:58:13,686 Source in /tmp/pip-wheel-nq_0zyo3/plantdrppred_e9d8e37035ef4bdd96024552f16b11e8 has version 0.2, which satisfies requirement plantdrppred==0.2 from https://files.pythonhosted.org/packages/2a/8e/123ac1de9868e9c1bb0d84a0e721f8eb6db22596c47e34fcd9cc6db7e54d/plantdrppred-0.2.tar.gz 2024-05-20T13:58:13,687 Removed plantdrppred==0.2 from https://files.pythonhosted.org/packages/2a/8e/123ac1de9868e9c1bb0d84a0e721f8eb6db22596c47e34fcd9cc6db7e54d/plantdrppred-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-c3_dlfei' 2024-05-20T13:58:13,693 Created temporary directory: /tmp/pip-unpack-zlcsrc7_ 2024-05-20T13:58:13,694 Created temporary directory: /tmp/pip-unpack-sdmq6bhu 2024-05-20T13:58:13,702 Building wheels for collected packages: plantdrppred 2024-05-20T13:58:13,707 Created temporary directory: /tmp/pip-wheel-kt68dcnp 2024-05-20T13:58:13,708 Building wheel for plantdrppred (setup.py): started 2024-05-20T13:58:13,709 Destination directory: /tmp/pip-wheel-kt68dcnp 2024-05-20T13:58:13,710 Running command python setup.py bdist_wheel 2024-05-20T13:58:14,830 running bdist_wheel 2024-05-20T13:58:14,932 running build 2024-05-20T13:58:14,933 running build_py 2024-05-20T13:58:14,961 creating build 2024-05-20T13:58:14,962 creating build/lib 2024-05-20T13:58:14,963 creating build/lib/plantdrppred 2024-05-20T13:58:14,964 creating build/lib/plantdrppred/possum 2024-05-20T13:58:14,965 copying src/plantdrppred/possum/matrixTransformer.py -> build/lib/plantdrppred/possum 2024-05-20T13:58:14,968 copying src/plantdrppred/possum/possum.py -> build/lib/plantdrppred/possum 2024-05-20T13:58:14,969 copying src/plantdrppred/possum/possum_ft.py -> build/lib/plantdrppred/possum 2024-05-20T13:58:14,971 copying src/plantdrppred/possum/headerHandler.py -> build/lib/plantdrppred/possum 2024-05-20T13:58:14,973 copying src/plantdrppred/possum/featureGenerator.py -> build/lib/plantdrppred/possum 2024-05-20T13:58:14,977 creating build/lib/plantdrppred/python_scripts 2024-05-20T13:58:14,978 copying src/plantdrppred/python_scripts/plantdrppred.py -> build/lib/plantdrppred/python_scripts 2024-05-20T13:58:14,981 copying src/plantdrppred/python_scripts/__init__.py -> build/lib/plantdrppred/python_scripts 2024-05-20T13:58:14,984 running egg_info 2024-05-20T13:58:15,043 writing src/plantdrppred.egg-info/PKG-INFO 2024-05-20T13:58:15,048 writing dependency_links to src/plantdrppred.egg-info/dependency_links.txt 2024-05-20T13:58:15,050 writing entry points to src/plantdrppred.egg-info/entry_points.txt 2024-05-20T13:58:15,051 writing requirements to src/plantdrppred.egg-info/requires.txt 2024-05-20T13:58:15,052 writing top-level names to src/plantdrppred.egg-info/top_level.txt 2024-05-20T13:58:15,092 reading manifest file 'src/plantdrppred.egg-info/SOURCES.txt' 2024-05-20T13:58:15,094 adding license file 'LICENSE' 2024-05-20T13:58:15,097 writing manifest file 'src/plantdrppred.egg-info/SOURCES.txt' 2024-05-20T13:58:15,107 creating build/lib/plantdrppred/model 2024-05-20T13:58:15,108 copying src/plantdrppred/model/model_aac -> build/lib/plantdrppred/model 2024-05-20T13:58:15,112 copying src/plantdrppred/model/model_pssm -> build/lib/plantdrppred/model 2024-05-20T13:58:15,126 creating build/lib/plantdrppred/blast_binaries 2024-05-20T13:58:15,126 creating build/lib/plantdrppred/blast_binaries/mac 2024-05-20T13:58:15,128 copying src/plantdrppred/blast_binaries/mac/blastp -> build/lib/plantdrppred/blast_binaries/mac 2024-05-20T13:58:15,546 copying src/plantdrppred/blast_binaries/mac/psiblast -> build/lib/plantdrppred/blast_binaries/mac 2024-05-20T13:58:16,013 creating build/lib/plantdrppred/blast_binaries/linux 2024-05-20T13:58:16,014 copying src/plantdrppred/blast_binaries/linux/blastp -> build/lib/plantdrppred/blast_binaries/linux 2024-05-20T13:58:16,496 copying src/plantdrppred/blast_binaries/linux/psiblast -> build/lib/plantdrppred/blast_binaries/linux 2024-05-20T13:58:16,966 creating build/lib/plantdrppred/blast_binaries/windows 2024-05-20T13:58:16,967 copying src/plantdrppred/blast_binaries/windows/ncbi-vdb-md.dll -> build/lib/plantdrppred/blast_binaries/windows 2024-05-20T13:58:17,025 copying src/plantdrppred/blast_binaries/windows/blastp.exe -> build/lib/plantdrppred/blast_binaries/windows 2024-05-20T13:58:17,303 copying src/plantdrppred/blast_binaries/windows/psiblast.exe -> build/lib/plantdrppred/blast_binaries/windows 2024-05-20T13:58:17,604 copying src/plantdrppred/blast_binaries/windows/nghttp2.dll -> build/lib/plantdrppred/blast_binaries/windows 2024-05-20T13:58:17,637 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-20T13:58:17,638 !! 2024-05-20T13:58:17,639 ******************************************************************************** 2024-05-20T13:58:17,639 Please avoid running ``setup.py`` directly. 2024-05-20T13:58:17,640 Instead, use pypa/build, pypa/installer or other 2024-05-20T13:58:17,640 standards-based tools. 2024-05-20T13:58:17,641 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-20T13:58:17,642 ******************************************************************************** 2024-05-20T13:58:17,643 !! 2024-05-20T13:58:17,644 self.initialize_options() 2024-05-20T13:58:17,666 installing to build/bdist.linux-armv7l/wheel 2024-05-20T13:58:17,667 running install 2024-05-20T13:58:17,692 running install_lib 2024-05-20T13:58:17,717 creating build/bdist.linux-armv7l 2024-05-20T13:58:17,718 creating build/bdist.linux-armv7l/wheel 2024-05-20T13:58:17,719 creating build/bdist.linux-armv7l/wheel/plantdrppred 2024-05-20T13:58:17,721 creating build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,723 copying build/lib/plantdrppred/possum/matrixTransformer.py -> build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,726 copying build/lib/plantdrppred/possum/possum.py -> build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,728 copying build/lib/plantdrppred/possum/possum_ft.py -> build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,729 copying build/lib/plantdrppred/possum/headerHandler.py -> build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,731 copying build/lib/plantdrppred/possum/featureGenerator.py -> build/bdist.linux-armv7l/wheel/plantdrppred/possum 2024-05-20T13:58:17,734 creating build/bdist.linux-armv7l/wheel/plantdrppred/model 2024-05-20T13:58:17,735 copying build/lib/plantdrppred/model/model_aac -> build/bdist.linux-armv7l/wheel/plantdrppred/model 2024-05-20T13:58:17,738 copying build/lib/plantdrppred/model/model_pssm -> build/bdist.linux-armv7l/wheel/plantdrppred/model 2024-05-20T13:58:17,790 creating build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries 2024-05-20T13:58:17,791 creating build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/mac 2024-05-20T13:58:17,792 copying build/lib/plantdrppred/blast_binaries/mac/blastp -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/mac 2024-05-20T13:58:18,296 copying build/lib/plantdrppred/blast_binaries/mac/psiblast -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/mac 2024-05-20T13:58:18,775 creating build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/linux 2024-05-20T13:58:18,776 copying build/lib/plantdrppred/blast_binaries/linux/blastp -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/linux 2024-05-20T13:58:19,266 copying build/lib/plantdrppred/blast_binaries/linux/psiblast -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/linux 2024-05-20T13:58:19,771 creating build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/windows 2024-05-20T13:58:19,772 copying build/lib/plantdrppred/blast_binaries/windows/ncbi-vdb-md.dll -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/windows 2024-05-20T13:58:19,833 copying build/lib/plantdrppred/blast_binaries/windows/blastp.exe -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/windows 2024-05-20T13:58:20,169 copying build/lib/plantdrppred/blast_binaries/windows/psiblast.exe -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/windows 2024-05-20T13:58:21,340 copying build/lib/plantdrppred/blast_binaries/windows/nghttp2.dll -> build/bdist.linux-armv7l/wheel/plantdrppred/blast_binaries/windows 2024-05-20T13:58:21,345 creating build/bdist.linux-armv7l/wheel/plantdrppred/python_scripts 2024-05-20T13:58:21,346 copying build/lib/plantdrppred/python_scripts/plantdrppred.py -> build/bdist.linux-armv7l/wheel/plantdrppred/python_scripts 2024-05-20T13:58:21,349 copying build/lib/plantdrppred/python_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/plantdrppred/python_scripts 2024-05-20T13:58:21,350 running install_egg_info 2024-05-20T13:58:21,384 Copying src/plantdrppred.egg-info to build/bdist.linux-armv7l/wheel/plantdrppred-0.2-py3.11.egg-info 2024-05-20T13:58:21,396 running install_scripts 2024-05-20T13:58:21,414 creating build/bdist.linux-armv7l/wheel/plantdrppred-0.2.dist-info/WHEEL 2024-05-20T13:58:21,416 creating '/tmp/pip-wheel-kt68dcnp/plantdrppred-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-20T13:58:27,755 adding 'plantdrppred/blast_binaries/linux/blastp' 2024-05-20T13:58:34,290 adding 'plantdrppred/blast_binaries/linux/psiblast' 2024-05-20T13:58:39,313 adding 'plantdrppred/blast_binaries/mac/blastp' 2024-05-20T13:58:44,308 adding 'plantdrppred/blast_binaries/mac/psiblast' 2024-05-20T13:58:47,908 adding 'plantdrppred/blast_binaries/windows/blastp.exe' 2024-05-20T13:58:48,687 adding 'plantdrppred/blast_binaries/windows/ncbi-vdb-md.dll' 2024-05-20T13:58:48,778 adding 'plantdrppred/blast_binaries/windows/nghttp2.dll' 2024-05-20T13:58:52,286 adding 'plantdrppred/blast_binaries/windows/psiblast.exe' 2024-05-20T13:58:52,413 adding 'plantdrppred/model/model_aac' 2024-05-20T13:58:52,483 adding 'plantdrppred/model/model_pssm' 2024-05-20T13:58:52,491 adding 'plantdrppred/possum/featureGenerator.py' 2024-05-20T13:58:52,492 adding 'plantdrppred/possum/headerHandler.py' 2024-05-20T13:58:52,494 adding 'plantdrppred/possum/matrixTransformer.py' 2024-05-20T13:58:52,496 adding 'plantdrppred/possum/possum.py' 2024-05-20T13:58:52,498 adding 'plantdrppred/possum/possum_ft.py' 2024-05-20T13:58:52,500 adding 'plantdrppred/python_scripts/__init__.py' 2024-05-20T13:58:52,502 adding 'plantdrppred/python_scripts/plantdrppred.py' 2024-05-20T13:58:52,510 adding 'plantdrppred-0.2.dist-info/LICENSE' 2024-05-20T13:58:52,511 adding 'plantdrppred-0.2.dist-info/METADATA' 2024-05-20T13:58:52,513 adding 'plantdrppred-0.2.dist-info/WHEEL' 2024-05-20T13:58:52,514 adding 'plantdrppred-0.2.dist-info/entry_points.txt' 2024-05-20T13:58:52,515 adding 'plantdrppred-0.2.dist-info/top_level.txt' 2024-05-20T13:58:52,516 adding 'plantdrppred-0.2.dist-info/RECORD' 2024-05-20T13:58:52,997 removing build/bdist.linux-armv7l/wheel 2024-05-20T13:58:53,186 Building wheel for plantdrppred (setup.py): finished with status 'done' 2024-05-20T13:58:54,466 Created wheel for plantdrppred: filename=plantdrppred-0.2-py3-none-any.whl size=61531278 sha256=7a29b8331efb0d4c6cf6bc22c4f5ad22241c0360d11c5657b93dedec54879bbb 2024-05-20T13:58:54,468 Stored in directory: /tmp/pip-ephem-wheel-cache-id_osyod/wheels/8d/3e/c5/6259f53a53b6bed1fb4a74e434122835d40b9b230d2988b4f8 2024-05-20T13:58:54,499 Successfully built plantdrppred 2024-05-20T13:58:55,979 Removed build tracker: '/tmp/pip-build-tracker-c3_dlfei'