2024-05-22T15:16:55,155 Created temporary directory: /tmp/pip-build-tracker-hv1bkljr
2024-05-22T15:16:55,156 Initialized build tracking at /tmp/pip-build-tracker-hv1bkljr
2024-05-22T15:16:55,156 Created build tracker: /tmp/pip-build-tracker-hv1bkljr
2024-05-22T15:16:55,157 Entered build tracker: /tmp/pip-build-tracker-hv1bkljr
2024-05-22T15:16:55,158 Created temporary directory: /tmp/pip-wheel-e8h3x6oa
2024-05-22T15:16:55,161 Created temporary directory: /tmp/pip-ephem-wheel-cache-14li49pc
2024-05-22T15:16:55,183 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-22T15:16:55,186 2 location(s) to search for versions of biomero:
2024-05-22T15:16:55,186 * https://pypi.org/simple/biomero/
2024-05-22T15:16:55,186 * https://www.piwheels.org/simple/biomero/
2024-05-22T15:16:55,187 Fetching project page and analyzing links: https://pypi.org/simple/biomero/
2024-05-22T15:16:55,188 Getting page https://pypi.org/simple/biomero/
2024-05-22T15:16:55,189 Found index url https://pypi.org/simple/
2024-05-22T15:16:55,325 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json
2024-05-22T15:16:55,330   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,331   Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0
2024-05-22T15:16:55,332   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,332   Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0
2024-05-22T15:16:55,333   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,334   Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0
2024-05-22T15:16:55,335   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,336   Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0
2024-05-22T15:16:55,337   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,338   Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1
2024-05-22T15:16:55,338   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,339   Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0
2024-05-22T15:16:55,340   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,341   Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0
2024-05-22T15:16:55,342   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/f4/ca212a8abbb68d2c32d48cab43cf6fe1622a5317a4e4300154dafe9b9862/biomero-1.7.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,343   Found link https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.1
2024-05-22T15:16:55,343   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/21/d9/c167814a1abc31271e77ad77422f04554cd41b18f62572e12c4f57e0d446/biomero-1.8.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,344   Found link https://files.pythonhosted.org/packages/c4/f3/5e41f475114acc86b9c5fc20fe702136efe2cfd9a93d877db1b6dd619297/biomero-1.8.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.8.0
2024-05-22T15:16:55,345   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/2b/97/0854245dad0152c2df83582e7802735b6c46e4ee97aaefa0252ee23af76c/biomero-1.9.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,346   Found link https://files.pythonhosted.org/packages/22/4f/1ad8dbbd2c2c569ce42ef22e424c10267f8af17ef0179fecc18dfaceb367/biomero-1.9.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.0
2024-05-22T15:16:55,346   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/38/23/7a5ce5588c26a7a8fd6da2a6dfd96b002cae0d52648df25c5e4526e0b84c/biomero-1.9.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,347   Found link https://files.pythonhosted.org/packages/6d/6b/d8bec19f77accd9ea2a90b990bd0aceba02de375751a8acc5a690a1d816a/biomero-1.9.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.1
2024-05-22T15:16:55,348   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/5b/7f/35fdc1e2d4e84550a0cccaa9cac65a36da0b51857726558507f440a10a72/biomero-1.10.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,349   Found link https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.10.0
2024-05-22T15:16:55,350 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/
2024-05-22T15:16:55,351 Getting page https://www.piwheels.org/simple/biomero/
2024-05-22T15:16:55,352 Found index url https://www.piwheels.org/simple/
2024-05-22T15:16:55,578 Fetched page https://www.piwheels.org/simple/biomero/ as text/html
2024-05-22T15:16:55,582   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.1-py3-none-any.whl#sha256=4ac212ff38e26184afd600913e8895efd3480866ea109645285bd8602f184280 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,583   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.0-py3-none-any.whl#sha256=d7b46dbddbc02213c8058fff735666ca242165070470776408d141210b02cc6b (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,584   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.8.0-py3-none-any.whl#sha256=823968c9fd9c97aa196bb2d2b94d85245d2163842ba800ea938a1fdeb7be8b74 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,585   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.1-py3-none-any.whl#sha256=d2aec9750cfab56583a01cbd08b734569956b5d4a5a0c524e6b57bc8d76338b4 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,585   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.0-py3-none-any.whl#sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,585   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,586   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,586   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,587   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,587   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,588   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-22T15:16:55,589 Skipping link: not a file: https://www.piwheels.org/simple/biomero/
2024-05-22T15:16:55,589 Skipping link: not a file: https://pypi.org/simple/biomero/
2024-05-22T15:16:55,609 Given no hashes to check 1 links for project 'biomero': discarding no candidates
2024-05-22T15:16:55,627 Collecting biomero==1.10.0
2024-05-22T15:16:55,629   Created temporary directory: /tmp/pip-unpack-vz3a0uh2
2024-05-22T15:16:55,852   Downloading biomero-1.10.0.tar.gz (1.1 MB)
2024-05-22T15:16:56,180   Added biomero==1.10.0 from https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz to build tracker '/tmp/pip-build-tracker-hv1bkljr'
2024-05-22T15:16:56,187   Created temporary directory: /tmp/pip-build-env-i4relut6
2024-05-22T15:16:56,191   Installing build dependencies: started
2024-05-22T15:16:56,192   Running command pip subprocess to install build dependencies
2024-05-22T15:16:57,350   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-05-22T15:16:57,852   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-22T15:16:59,514   Collecting setuptools>=45
2024-05-22T15:16:59,548     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-05-22T15:16:59,862   Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2)
2024-05-22T15:16:59,881     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB)
2024-05-22T15:17:00,203   Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2024-05-22T15:17:00,219     Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB)
2024-05-22T15:17:02,744   Installing collected packages: setuptools, packaging, setuptools_scm
2024-05-22T15:17:07,265   Successfully installed packaging-24.0 setuptools-70.0.0 setuptools_scm-8.1.0
2024-05-22T15:17:07,812   Installing build dependencies: finished with status 'done'
2024-05-22T15:17:07,817   Getting requirements to build wheel: started
2024-05-22T15:17:07,818   Running command Getting requirements to build wheel
2024-05-22T15:17:08,680   running egg_info
2024-05-22T15:17:08,686   writing biomero.egg-info/PKG-INFO
2024-05-22T15:17:08,692   writing dependency_links to biomero.egg-info/dependency_links.txt
2024-05-22T15:17:08,694   writing requirements to biomero.egg-info/requires.txt
2024-05-22T15:17:08,695   writing top-level names to biomero.egg-info/top_level.txt
2024-05-22T15:17:08,737   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-22T15:17:08,741   reading manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:08,744   reading manifest template 'MANIFEST.in'
2024-05-22T15:17:08,754   adding license file 'LICENSE'
2024-05-22T15:17:08,758   writing manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:08,878   Getting requirements to build wheel: finished with status 'done'
2024-05-22T15:17:08,889   Installing backend dependencies: started
2024-05-22T15:17:08,890   Running command pip subprocess to install backend dependencies
2024-05-22T15:17:10,046   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-05-22T15:17:10,556   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-22T15:17:11,848   Collecting wheel
2024-05-22T15:17:11,871     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-05-22T15:17:14,188   Installing collected packages: wheel
2024-05-22T15:17:14,416     Creating /tmp/pip-build-env-i4relut6/normal/local/bin
2024-05-22T15:17:14,418     changing mode of /tmp/pip-build-env-i4relut6/normal/local/bin/wheel to 755
2024-05-22T15:17:14,430   Successfully installed wheel-0.43.0
2024-05-22T15:17:14,886   Installing backend dependencies: finished with status 'done'
2024-05-22T15:17:14,887   Created temporary directory: /tmp/pip-modern-metadata-an205tas
2024-05-22T15:17:14,890   Preparing metadata (pyproject.toml): started
2024-05-22T15:17:14,891   Running command Preparing metadata (pyproject.toml)
2024-05-22T15:17:15,782   running dist_info
2024-05-22T15:17:15,788   creating /tmp/pip-modern-metadata-an205tas/biomero.egg-info
2024-05-22T15:17:15,793   writing /tmp/pip-modern-metadata-an205tas/biomero.egg-info/PKG-INFO
2024-05-22T15:17:15,798   writing dependency_links to /tmp/pip-modern-metadata-an205tas/biomero.egg-info/dependency_links.txt
2024-05-22T15:17:15,801   writing requirements to /tmp/pip-modern-metadata-an205tas/biomero.egg-info/requires.txt
2024-05-22T15:17:15,802   writing top-level names to /tmp/pip-modern-metadata-an205tas/biomero.egg-info/top_level.txt
2024-05-22T15:17:15,803   writing manifest file '/tmp/pip-modern-metadata-an205tas/biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:15,847   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-22T15:17:15,851   reading manifest file '/tmp/pip-modern-metadata-an205tas/biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:15,853   reading manifest template 'MANIFEST.in'
2024-05-22T15:17:15,862   adding license file 'LICENSE'
2024-05-22T15:17:15,865   writing manifest file '/tmp/pip-modern-metadata-an205tas/biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:15,866   creating '/tmp/pip-modern-metadata-an205tas/biomero-1.10.0.dist-info'
2024-05-22T15:17:16,031   Preparing metadata (pyproject.toml): finished with status 'done'
2024-05-22T15:17:16,039   Source in /tmp/pip-wheel-e8h3x6oa/biomero_31ea3662218440ce9eaf168aa8942796 has version 1.10.0, which satisfies requirement biomero==1.10.0 from https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz
2024-05-22T15:17:16,040   Removed biomero==1.10.0 from https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz from build tracker '/tmp/pip-build-tracker-hv1bkljr'
2024-05-22T15:17:16,053 Created temporary directory: /tmp/pip-unpack-dll093c8
2024-05-22T15:17:16,054 Created temporary directory: /tmp/pip-unpack-akrtfo8f
2024-05-22T15:17:16,074 Building wheels for collected packages: biomero
2024-05-22T15:17:16,078   Created temporary directory: /tmp/pip-wheel-cuuicctq
2024-05-22T15:17:16,079   Destination directory: /tmp/pip-wheel-cuuicctq
2024-05-22T15:17:16,081   Building wheel for biomero (pyproject.toml): started
2024-05-22T15:17:16,082   Running command Building wheel for biomero (pyproject.toml)
2024-05-22T15:17:16,928   running bdist_wheel
2024-05-22T15:17:16,949   running build
2024-05-22T15:17:16,950   running build_py
2024-05-22T15:17:16,955   creating build
2024-05-22T15:17:16,956   creating build/lib
2024-05-22T15:17:16,957   creating build/lib/biomero
2024-05-22T15:17:16,958   copying biomero/constants.py -> build/lib/biomero
2024-05-22T15:17:16,960   copying biomero/slurm_client.py -> build/lib/biomero
2024-05-22T15:17:16,963   copying biomero/__init__.py -> build/lib/biomero
2024-05-22T15:17:16,965   creating build/lib/resources
2024-05-22T15:17:16,966   copying resources/convert_zarr_to_tiff.py -> build/lib/resources
2024-05-22T15:17:16,968   copying resources/__init__.py -> build/lib/resources
2024-05-22T15:17:16,971   creating build/lib/docs
2024-05-22T15:17:16,971   copying docs/conf.py -> build/lib/docs
2024-05-22T15:17:16,974   creating build/lib/tests
2024-05-22T15:17:16,975   creating build/lib/tests/integration
2024-05-22T15:17:16,976   copying tests/integration/__init__.py -> build/lib/tests/integration
2024-05-22T15:17:16,978   creating build/lib/tests/unit
2024-05-22T15:17:16,979   copying tests/unit/test_slurm_client.py -> build/lib/tests/unit
2024-05-22T15:17:16,982   copying tests/unit/__init__.py -> build/lib/tests/unit
2024-05-22T15:17:16,983   running egg_info
2024-05-22T15:17:16,990   writing biomero.egg-info/PKG-INFO
2024-05-22T15:17:16,995   writing dependency_links to biomero.egg-info/dependency_links.txt
2024-05-22T15:17:16,997   writing requirements to biomero.egg-info/requires.txt
2024-05-22T15:17:16,998   writing top-level names to biomero.egg-info/top_level.txt
2024-05-22T15:17:17,028   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-22T15:17:17,030   reading manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:17,035   reading manifest template 'MANIFEST.in'
2024-05-22T15:17:17,043   adding license file 'LICENSE'
2024-05-22T15:17:17,047   writing manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-22T15:17:17,053   copying resources/convert_job_array.sh -> build/lib/resources
2024-05-22T15:17:17,055   copying resources/convert_zarr_to_tiff.def -> build/lib/resources
2024-05-22T15:17:17,057   copying resources/example.config -> build/lib/resources
2024-05-22T15:17:17,059   copying resources/job_template.sh -> build/lib/resources
2024-05-22T15:17:17,061   copying resources/pull_images.sh -> build/lib/resources
2024-05-22T15:17:17,063   copying resources/slurm-config.ini -> build/lib/resources
2024-05-22T15:17:17,065   copying docs/Makefile -> build/lib/docs
2024-05-22T15:17:17,067   copying docs/biomero.rst -> build/lib/docs
2024-05-22T15:17:17,069   copying docs/index.rst -> build/lib/docs
2024-05-22T15:17:17,071   copying docs/make.bat -> build/lib/docs
2024-05-22T15:17:17,073   copying docs/modules.rst -> build/lib/docs
2024-05-22T15:17:17,075   copying docs/readme_link.md -> build/lib/docs
2024-05-22T15:17:17,077   copying docs/requirements.txt -> build/lib/docs
2024-05-22T15:17:17,079   copying docs/tutorial_link.md -> build/lib/docs
2024-05-22T15:17:17,081   creating build/lib/resources/tutorials
2024-05-22T15:17:17,082   copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials
2024-05-22T15:17:17,085   copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials
2024-05-22T15:17:17,087   copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials
2024-05-22T15:17:17,090   copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials
2024-05-22T15:17:17,092   copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials
2024-05-22T15:17:17,095   creating build/lib/resources/tutorials/images
2024-05-22T15:17:17,095   copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,102   copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,109   copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,113   copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,119   copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,122   copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,124   copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,127   copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images
2024-05-22T15:17:17,141   installing to build/bdist.linux-armv7l/wheel
2024-05-22T15:17:17,142   running install
2024-05-22T15:17:17,166   running install_lib
2024-05-22T15:17:17,171   creating build/bdist.linux-armv7l
2024-05-22T15:17:17,172   creating build/bdist.linux-armv7l/wheel
2024-05-22T15:17:17,173   creating build/bdist.linux-armv7l/wheel/biomero
2024-05-22T15:17:17,174   copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-22T15:17:17,176   copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-22T15:17:17,180   copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-22T15:17:17,182   creating build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,183   creating build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,184   copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,187   copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,190   copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,192   copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,194   copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-22T15:17:17,197   creating build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,198   copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,201   copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,208   copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,215   copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,218   copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,221   copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,224   copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,227   copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-22T15:17:17,233   copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,235   copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,236   copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,238   copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,240   copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,242   copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,244   copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,245   copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-22T15:17:17,247   creating build/bdist.linux-armv7l/wheel/tests
2024-05-22T15:17:17,248   creating build/bdist.linux-armv7l/wheel/tests/integration
2024-05-22T15:17:17,249   copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration
2024-05-22T15:17:17,251   creating build/bdist.linux-armv7l/wheel/tests/unit
2024-05-22T15:17:17,252   copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit
2024-05-22T15:17:17,255   copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit
2024-05-22T15:17:17,258   creating build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,258   copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,260   copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,262   copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,264   copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,265   copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,267   copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,269   copying build/lib/docs/biomero.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,271   copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,273   copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs
2024-05-22T15:17:17,274   running install_egg_info
2024-05-22T15:17:17,279   Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.10.0-py3.11.egg-info
2024-05-22T15:17:17,290   running install_scripts
2024-05-22T15:17:17,310   creating build/bdist.linux-armv7l/wheel/biomero-1.10.0.dist-info/WHEEL
2024-05-22T15:17:17,313   creating '/tmp/pip-wheel-cuuicctq/.tmp-0_ypvwh5/biomero-1.10.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-05-22T15:17:17,315   adding 'biomero/__init__.py'
2024-05-22T15:17:17,317   adding 'biomero/constants.py'
2024-05-22T15:17:17,327   adding 'biomero/slurm_client.py'
2024-05-22T15:17:17,330   adding 'docs/Makefile'
2024-05-22T15:17:17,331   adding 'docs/biomero.rst'
2024-05-22T15:17:17,333   adding 'docs/conf.py'
2024-05-22T15:17:17,334   adding 'docs/index.rst'
2024-05-22T15:17:17,335   adding 'docs/make.bat'
2024-05-22T15:17:17,337   adding 'docs/modules.rst'
2024-05-22T15:17:17,338   adding 'docs/readme_link.md'
2024-05-22T15:17:17,339   adding 'docs/requirements.txt'
2024-05-22T15:17:17,340   adding 'docs/tutorial_link.md'
2024-05-22T15:17:17,342   adding 'resources/__init__.py'
2024-05-22T15:17:17,343   adding 'resources/convert_job_array.sh'
2024-05-22T15:17:17,344   adding 'resources/convert_zarr_to_tiff.def'
2024-05-22T15:17:17,345   adding 'resources/convert_zarr_to_tiff.py'
2024-05-22T15:17:17,346   adding 'resources/example.config'
2024-05-22T15:17:17,348   adding 'resources/job_template.sh'
2024-05-22T15:17:17,349   adding 'resources/pull_images.sh'
2024-05-22T15:17:17,351   adding 'resources/slurm-config.ini'
2024-05-22T15:17:17,354   adding 'resources/tutorials/tutorial_Azure_slurm.md'
2024-05-22T15:17:17,357   adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md'
2024-05-22T15:17:17,358   adding 'resources/tutorials/tutorial_cellexpansion.md'
2024-05-22T15:17:17,362   adding 'resources/tutorials/tutorial_cellprofiler.md'
2024-05-22T15:17:17,365   adding 'resources/tutorials/tutorial_local_slurm.md'
2024-05-22T15:17:17,406   adding 'resources/tutorials/images/Cells.tif'
2024-05-22T15:17:17,444   adding 'resources/tutorials/images/cellexpansion.png'
2024-05-22T15:17:17,456   adding 'resources/tutorials/images/gc_allow_ssh.PNG'
2024-05-22T15:17:17,479   adding 'resources/tutorials/images/nuclei_labels.png'
2024-05-22T15:17:17,482   adding 'resources/tutorials/images/webclient_init_env.PNG'
2024-05-22T15:17:17,485   adding 'resources/tutorials/images/webclient_init_env_done.PNG'
2024-05-22T15:17:17,489   adding 'resources/tutorials/images/webclient_run_cellpose.PNG'
2024-05-22T15:17:17,495   adding 'resources/tutorials/images/webclient_run_workflow.PNG'
2024-05-22T15:17:17,498   adding 'tests/integration/__init__.py'
2024-05-22T15:17:17,499   adding 'tests/unit/__init__.py'
2024-05-22T15:17:17,503   adding 'tests/unit/test_slurm_client.py'
2024-05-22T15:17:17,506   adding 'biomero-1.10.0.dist-info/LICENSE'
2024-05-22T15:17:17,513   adding 'biomero-1.10.0.dist-info/METADATA'
2024-05-22T15:17:17,515   adding 'biomero-1.10.0.dist-info/WHEEL'
2024-05-22T15:17:17,515   adding 'biomero-1.10.0.dist-info/top_level.txt'
2024-05-22T15:17:17,517   adding 'biomero-1.10.0.dist-info/RECORD'
2024-05-22T15:17:17,530   removing build/bdist.linux-armv7l/wheel
2024-05-22T15:17:17,670   Building wheel for biomero (pyproject.toml): finished with status 'done'
2024-05-22T15:17:17,705   Created wheel for biomero: filename=biomero-1.10.0-py3-none-any.whl size=1092947 sha256=686f8597edcf9f3aada4fc0833d1f0b9cf8cbd5f37fa2ff1f25714933a2b3692
2024-05-22T15:17:17,706   Stored in directory: /tmp/pip-ephem-wheel-cache-14li49pc/wheels/06/8d/ea/ebd5d6f17cccc2ab54bb26917460f8070613137a2878fedf7b
2024-05-22T15:17:17,729 Successfully built biomero
2024-05-22T15:17:17,769 Removed build tracker: '/tmp/pip-build-tracker-hv1bkljr'