2024-05-23T17:10:10,290 Created temporary directory: /tmp/pip-build-tracker-b6gfsgnl
2024-05-23T17:10:10,291 Initialized build tracking at /tmp/pip-build-tracker-b6gfsgnl
2024-05-23T17:10:10,292 Created build tracker: /tmp/pip-build-tracker-b6gfsgnl
2024-05-23T17:10:10,292 Entered build tracker: /tmp/pip-build-tracker-b6gfsgnl
2024-05-23T17:10:10,293 Created temporary directory: /tmp/pip-wheel-lownfsbv
2024-05-23T17:10:10,296 Created temporary directory: /tmp/pip-ephem-wheel-cache-57frxmnr
2024-05-23T17:10:10,318 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-23T17:10:10,321 2 location(s) to search for versions of biomero:
2024-05-23T17:10:10,321 * https://pypi.org/simple/biomero/
2024-05-23T17:10:10,321 * https://www.piwheels.org/simple/biomero/
2024-05-23T17:10:10,322 Fetching project page and analyzing links: https://pypi.org/simple/biomero/
2024-05-23T17:10:10,323 Getting page https://pypi.org/simple/biomero/
2024-05-23T17:10:10,324 Found index url https://pypi.org/simple/
2024-05-23T17:10:10,542 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json
2024-05-23T17:10:10,547   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,548   Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0
2024-05-23T17:10:10,549   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,550   Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0
2024-05-23T17:10:10,551   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,552   Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0
2024-05-23T17:10:10,552   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,553   Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0
2024-05-23T17:10:10,554   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,555   Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1
2024-05-23T17:10:10,556   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,557   Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0
2024-05-23T17:10:10,558   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,559   Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0
2024-05-23T17:10:10,559   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/f4/ca212a8abbb68d2c32d48cab43cf6fe1622a5317a4e4300154dafe9b9862/biomero-1.7.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,560   Found link https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.1
2024-05-23T17:10:10,561   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/21/d9/c167814a1abc31271e77ad77422f04554cd41b18f62572e12c4f57e0d446/biomero-1.8.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,562   Found link https://files.pythonhosted.org/packages/c4/f3/5e41f475114acc86b9c5fc20fe702136efe2cfd9a93d877db1b6dd619297/biomero-1.8.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.8.0
2024-05-23T17:10:10,562   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/2b/97/0854245dad0152c2df83582e7802735b6c46e4ee97aaefa0252ee23af76c/biomero-1.9.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,563   Found link https://files.pythonhosted.org/packages/22/4f/1ad8dbbd2c2c569ce42ef22e424c10267f8af17ef0179fecc18dfaceb367/biomero-1.9.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.0
2024-05-23T17:10:10,564   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/38/23/7a5ce5588c26a7a8fd6da2a6dfd96b002cae0d52648df25c5e4526e0b84c/biomero-1.9.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,565   Found link https://files.pythonhosted.org/packages/6d/6b/d8bec19f77accd9ea2a90b990bd0aceba02de375751a8acc5a690a1d816a/biomero-1.9.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.1
2024-05-23T17:10:10,566   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/5b/7f/35fdc1e2d4e84550a0cccaa9cac65a36da0b51857726558507f440a10a72/biomero-1.10.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,567   Found link https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.10.0
2024-05-23T17:10:10,567   Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/1b/9e/0f43d61d43ab23b5da467fa52102764d3c5d5c72dcc0aeaae04458f79337/biomero-1.11.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,568   Found link https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.11.0
2024-05-23T17:10:10,569 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/
2024-05-23T17:10:10,570 Getting page https://www.piwheels.org/simple/biomero/
2024-05-23T17:10:10,571 Found index url https://www.piwheels.org/simple/
2024-05-23T17:10:10,728 Fetched page https://www.piwheels.org/simple/biomero/ as text/html
2024-05-23T17:10:10,733   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.10.0-py3-none-any.whl#sha256=686f8597edcf9f3aada4fc0833d1f0b9cf8cbd5f37fa2ff1f25714933a2b3692 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,734   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.1-py3-none-any.whl#sha256=4ac212ff38e26184afd600913e8895efd3480866ea109645285bd8602f184280 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,734   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.0-py3-none-any.whl#sha256=d7b46dbddbc02213c8058fff735666ca242165070470776408d141210b02cc6b (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,734   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.8.0-py3-none-any.whl#sha256=823968c9fd9c97aa196bb2d2b94d85245d2163842ba800ea938a1fdeb7be8b74 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,735   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.1-py3-none-any.whl#sha256=d2aec9750cfab56583a01cbd08b734569956b5d4a5a0c524e6b57bc8d76338b4 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,735   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.0-py3-none-any.whl#sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,736   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,736   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,737   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,737   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,738   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,738   Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7)
2024-05-23T17:10:10,739 Skipping link: not a file: https://www.piwheels.org/simple/biomero/
2024-05-23T17:10:10,740 Skipping link: not a file: https://pypi.org/simple/biomero/
2024-05-23T17:10:10,761 Given no hashes to check 1 links for project 'biomero': discarding no candidates
2024-05-23T17:10:10,780 Collecting biomero==1.11.0
2024-05-23T17:10:10,783   Created temporary directory: /tmp/pip-unpack-t_nxnkim
2024-05-23T17:10:11,003   Downloading biomero-1.11.0.tar.gz (1.1 MB)
2024-05-23T17:10:11,319   Added biomero==1.11.0 from https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz to build tracker '/tmp/pip-build-tracker-b6gfsgnl'
2024-05-23T17:10:11,326   Created temporary directory: /tmp/pip-build-env-z2fv3pyt
2024-05-23T17:10:11,330   Installing build dependencies: started
2024-05-23T17:10:11,331   Running command pip subprocess to install build dependencies
2024-05-23T17:10:12,459   Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11)
2024-05-23T17:10:12,951   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-23T17:10:14,508   Collecting setuptools>=45
2024-05-23T17:10:14,537     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-05-23T17:10:14,847   Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2)
2024-05-23T17:10:14,863     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB)
2024-05-23T17:10:15,204   Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2024-05-23T17:10:15,221     Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB)
2024-05-23T17:10:17,912   Installing collected packages: setuptools, packaging, setuptools_scm
2024-05-23T17:10:20,639   Successfully installed packaging-24.0 setuptools-70.0.0 setuptools_scm-8.1.0
2024-05-23T17:10:21,127   Installing build dependencies: finished with status 'done'
2024-05-23T17:10:21,132   Getting requirements to build wheel: started
2024-05-23T17:10:21,134   Running command Getting requirements to build wheel
2024-05-23T17:10:25,592   running egg_info
2024-05-23T17:10:25,597   writing biomero.egg-info/PKG-INFO
2024-05-23T17:10:25,603   writing dependency_links to biomero.egg-info/dependency_links.txt
2024-05-23T17:10:25,605   writing requirements to biomero.egg-info/requires.txt
2024-05-23T17:10:25,606   writing top-level names to biomero.egg-info/top_level.txt
2024-05-23T17:10:25,648   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-23T17:10:25,651   reading manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:25,655   reading manifest template 'MANIFEST.in'
2024-05-23T17:10:25,663   adding license file 'LICENSE'
2024-05-23T17:10:25,667   writing manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:25,788   Getting requirements to build wheel: finished with status 'done'
2024-05-23T17:10:25,798   Installing backend dependencies: started
2024-05-23T17:10:25,800   Running command pip subprocess to install backend dependencies
2024-05-23T17:10:26,953   Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11)
2024-05-23T17:10:27,445   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-23T17:10:27,933   Collecting wheel
2024-05-23T17:10:27,948     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-05-23T17:10:30,377   Installing collected packages: wheel
2024-05-23T17:10:30,600     Creating /tmp/pip-build-env-z2fv3pyt/normal/local/bin
2024-05-23T17:10:30,602     changing mode of /tmp/pip-build-env-z2fv3pyt/normal/local/bin/wheel to 755
2024-05-23T17:10:30,614   Successfully installed wheel-0.43.0
2024-05-23T17:10:31,046   Installing backend dependencies: finished with status 'done'
2024-05-23T17:10:31,048   Created temporary directory: /tmp/pip-modern-metadata-rqmkuzkc
2024-05-23T17:10:31,051   Preparing metadata (pyproject.toml): started
2024-05-23T17:10:31,052   Running command Preparing metadata (pyproject.toml)
2024-05-23T17:10:31,960   running dist_info
2024-05-23T17:10:31,966   creating /tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info
2024-05-23T17:10:31,972   writing /tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/PKG-INFO
2024-05-23T17:10:31,978   writing dependency_links to /tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/dependency_links.txt
2024-05-23T17:10:31,981   writing requirements to /tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/requires.txt
2024-05-23T17:10:31,982   writing top-level names to /tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/top_level.txt
2024-05-23T17:10:31,983   writing manifest file '/tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:32,030   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-23T17:10:32,034   reading manifest file '/tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:32,036   reading manifest template 'MANIFEST.in'
2024-05-23T17:10:32,046   adding license file 'LICENSE'
2024-05-23T17:10:32,049   writing manifest file '/tmp/pip-modern-metadata-rqmkuzkc/biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:32,050   creating '/tmp/pip-modern-metadata-rqmkuzkc/biomero-1.11.0.dist-info'
2024-05-23T17:10:32,218   Preparing metadata (pyproject.toml): finished with status 'done'
2024-05-23T17:10:32,227   Source in /tmp/pip-wheel-lownfsbv/biomero_eca5f15661ce4d86a569493995c539d3 has version 1.11.0, which satisfies requirement biomero==1.11.0 from https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz
2024-05-23T17:10:32,228   Removed biomero==1.11.0 from https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz from build tracker '/tmp/pip-build-tracker-b6gfsgnl'
2024-05-23T17:10:32,241 Created temporary directory: /tmp/pip-unpack-16dok_u1
2024-05-23T17:10:32,242 Created temporary directory: /tmp/pip-unpack-izqy6_4q
2024-05-23T17:10:32,263 Building wheels for collected packages: biomero
2024-05-23T17:10:32,268   Created temporary directory: /tmp/pip-wheel-dkcvy1m7
2024-05-23T17:10:32,269   Destination directory: /tmp/pip-wheel-dkcvy1m7
2024-05-23T17:10:32,271   Building wheel for biomero (pyproject.toml): started
2024-05-23T17:10:32,272   Running command Building wheel for biomero (pyproject.toml)
2024-05-23T17:10:33,152   running bdist_wheel
2024-05-23T17:10:33,175   running build
2024-05-23T17:10:33,176   running build_py
2024-05-23T17:10:33,181   creating build
2024-05-23T17:10:33,182   creating build/lib
2024-05-23T17:10:33,183   creating build/lib/docs
2024-05-23T17:10:33,184   copying docs/conf.py -> build/lib/docs
2024-05-23T17:10:33,188   creating build/lib/biomero
2024-05-23T17:10:33,189   copying biomero/slurm_client.py -> build/lib/biomero
2024-05-23T17:10:33,194   copying biomero/__init__.py -> build/lib/biomero
2024-05-23T17:10:33,196   copying biomero/constants.py -> build/lib/biomero
2024-05-23T17:10:33,199   creating build/lib/resources
2024-05-23T17:10:33,199   copying resources/__init__.py -> build/lib/resources
2024-05-23T17:10:33,201   copying resources/convert_zarr_to_tiff.py -> build/lib/resources
2024-05-23T17:10:33,203   creating build/lib/tests
2024-05-23T17:10:33,204   creating build/lib/tests/integration
2024-05-23T17:10:33,205   copying tests/integration/__init__.py -> build/lib/tests/integration
2024-05-23T17:10:33,207   creating build/lib/tests/unit
2024-05-23T17:10:33,209   copying tests/unit/__init__.py -> build/lib/tests/unit
2024-05-23T17:10:33,211   copying tests/unit/test_slurm_client.py -> build/lib/tests/unit
2024-05-23T17:10:33,215   running egg_info
2024-05-23T17:10:33,222   writing biomero.egg-info/PKG-INFO
2024-05-23T17:10:33,228   writing dependency_links to biomero.egg-info/dependency_links.txt
2024-05-23T17:10:33,230   writing requirements to biomero.egg-info/requires.txt
2024-05-23T17:10:33,231   writing top-level names to biomero.egg-info/top_level.txt
2024-05-23T17:10:33,263   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-05-23T17:10:33,266   reading manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:33,270   reading manifest template 'MANIFEST.in'
2024-05-23T17:10:33,280   adding license file 'LICENSE'
2024-05-23T17:10:33,283   writing manifest file 'biomero.egg-info/SOURCES.txt'
2024-05-23T17:10:33,289   copying docs/Makefile -> build/lib/docs
2024-05-23T17:10:33,291   copying docs/biomero.rst -> build/lib/docs
2024-05-23T17:10:33,293   copying docs/index.rst -> build/lib/docs
2024-05-23T17:10:33,296   copying docs/make.bat -> build/lib/docs
2024-05-23T17:10:33,297   copying docs/modules.rst -> build/lib/docs
2024-05-23T17:10:33,299   copying docs/readme_link.md -> build/lib/docs
2024-05-23T17:10:33,301   copying docs/requirements.txt -> build/lib/docs
2024-05-23T17:10:33,303   copying docs/tutorial_link.md -> build/lib/docs
2024-05-23T17:10:33,305   copying resources/convert_job_array.sh -> build/lib/resources
2024-05-23T17:10:33,307   copying resources/convert_zarr_to_tiff.def -> build/lib/resources
2024-05-23T17:10:33,308   copying resources/example.config -> build/lib/resources
2024-05-23T17:10:33,310   copying resources/job_template.sh -> build/lib/resources
2024-05-23T17:10:33,312   copying resources/pull_images.sh -> build/lib/resources
2024-05-23T17:10:33,315   copying resources/slurm-config.ini -> build/lib/resources
2024-05-23T17:10:33,317   creating build/lib/resources/tutorials
2024-05-23T17:10:33,318   copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials
2024-05-23T17:10:33,321   copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials
2024-05-23T17:10:33,323   copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials
2024-05-23T17:10:33,326   copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials
2024-05-23T17:10:33,330   copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials
2024-05-23T17:10:33,333   creating build/lib/resources/tutorials/images
2024-05-23T17:10:33,334   copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,347   copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,359   copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,365   copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,373   copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,377   copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,380   copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,384   copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images
2024-05-23T17:10:33,399   installing to build/bdist.linux-armv7l/wheel
2024-05-23T17:10:33,400   running install
2024-05-23T17:10:33,426   running install_lib
2024-05-23T17:10:33,432   creating build/bdist.linux-armv7l
2024-05-23T17:10:33,433   creating build/bdist.linux-armv7l/wheel
2024-05-23T17:10:33,435   creating build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,437   copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,440   copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,442   copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,445   copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,447   copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,450   copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,453   copying build/lib/docs/biomero.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,455   copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,458   copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs
2024-05-23T17:10:33,461   creating build/bdist.linux-armv7l/wheel/tests
2024-05-23T17:10:33,463   creating build/bdist.linux-armv7l/wheel/tests/integration
2024-05-23T17:10:33,465   copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration
2024-05-23T17:10:33,468   creating build/bdist.linux-armv7l/wheel/tests/unit
2024-05-23T17:10:33,469   copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit
2024-05-23T17:10:33,472   copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit
2024-05-23T17:10:33,476   creating build/bdist.linux-armv7l/wheel/biomero
2024-05-23T17:10:33,478   copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-23T17:10:33,482   copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-23T17:10:33,484   copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero
2024-05-23T17:10:33,487   creating build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,488   copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,491   copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,493   copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,496   copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,498   copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,501   creating build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,502   copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,506   copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,509   creating build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,510   copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,514   copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,517   copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,523   copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,527   copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,530   copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,533   copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,540   copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images
2024-05-23T17:10:33,548   copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,551   copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,554   copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials
2024-05-23T17:10:33,556   copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,558   copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,560   copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources
2024-05-23T17:10:33,563   running install_egg_info
2024-05-23T17:10:33,568   Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.11.0-py3.11.egg-info
2024-05-23T17:10:33,581   running install_scripts
2024-05-23T17:10:33,603   creating build/bdist.linux-armv7l/wheel/biomero-1.11.0.dist-info/WHEEL
2024-05-23T17:10:33,606   creating '/tmp/pip-wheel-dkcvy1m7/.tmp-74h6c941/biomero-1.11.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-05-23T17:10:33,609   adding 'biomero/__init__.py'
2024-05-23T17:10:33,610   adding 'biomero/constants.py'
2024-05-23T17:10:33,620   adding 'biomero/slurm_client.py'
2024-05-23T17:10:33,623   adding 'docs/Makefile'
2024-05-23T17:10:33,625   adding 'docs/biomero.rst'
2024-05-23T17:10:33,626   adding 'docs/conf.py'
2024-05-23T17:10:33,627   adding 'docs/index.rst'
2024-05-23T17:10:33,629   adding 'docs/make.bat'
2024-05-23T17:10:33,630   adding 'docs/modules.rst'
2024-05-23T17:10:33,631   adding 'docs/readme_link.md'
2024-05-23T17:10:33,633   adding 'docs/requirements.txt'
2024-05-23T17:10:33,634   adding 'docs/tutorial_link.md'
2024-05-23T17:10:33,636   adding 'resources/__init__.py'
2024-05-23T17:10:33,637   adding 'resources/convert_job_array.sh'
2024-05-23T17:10:33,638   adding 'resources/convert_zarr_to_tiff.def'
2024-05-23T17:10:33,639   adding 'resources/convert_zarr_to_tiff.py'
2024-05-23T17:10:33,641   adding 'resources/example.config'
2024-05-23T17:10:33,642   adding 'resources/job_template.sh'
2024-05-23T17:10:33,643   adding 'resources/pull_images.sh'
2024-05-23T17:10:33,645   adding 'resources/slurm-config.ini'
2024-05-23T17:10:33,648   adding 'resources/tutorials/tutorial_Azure_slurm.md'
2024-05-23T17:10:33,651   adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md'
2024-05-23T17:10:33,653   adding 'resources/tutorials/tutorial_cellexpansion.md'
2024-05-23T17:10:33,656   adding 'resources/tutorials/tutorial_cellprofiler.md'
2024-05-23T17:10:33,660   adding 'resources/tutorials/tutorial_local_slurm.md'
2024-05-23T17:10:33,701   adding 'resources/tutorials/images/Cells.tif'
2024-05-23T17:10:33,738   adding 'resources/tutorials/images/cellexpansion.png'
2024-05-23T17:10:33,750   adding 'resources/tutorials/images/gc_allow_ssh.PNG'
2024-05-23T17:10:33,772   adding 'resources/tutorials/images/nuclei_labels.png'
2024-05-23T17:10:33,776   adding 'resources/tutorials/images/webclient_init_env.PNG'
2024-05-23T17:10:33,779   adding 'resources/tutorials/images/webclient_init_env_done.PNG'
2024-05-23T17:10:33,783   adding 'resources/tutorials/images/webclient_run_cellpose.PNG'
2024-05-23T17:10:33,789   adding 'resources/tutorials/images/webclient_run_workflow.PNG'
2024-05-23T17:10:33,791   adding 'tests/integration/__init__.py'
2024-05-23T17:10:33,793   adding 'tests/unit/__init__.py'
2024-05-23T17:10:33,797   adding 'tests/unit/test_slurm_client.py'
2024-05-23T17:10:33,799   adding 'biomero-1.11.0.dist-info/LICENSE'
2024-05-23T17:10:33,807   adding 'biomero-1.11.0.dist-info/METADATA'
2024-05-23T17:10:33,809   adding 'biomero-1.11.0.dist-info/WHEEL'
2024-05-23T17:10:33,810   adding 'biomero-1.11.0.dist-info/top_level.txt'
2024-05-23T17:10:33,811   adding 'biomero-1.11.0.dist-info/RECORD'
2024-05-23T17:10:33,827   removing build/bdist.linux-armv7l/wheel
2024-05-23T17:10:33,974   Building wheel for biomero (pyproject.toml): finished with status 'done'
2024-05-23T17:10:34,007   Created wheel for biomero: filename=biomero-1.11.0-py3-none-any.whl size=1092934 sha256=708af5176c818ccdadc0403f4584a53487f49346ae5de6c46343637b971637e5
2024-05-23T17:10:34,008   Stored in directory: /tmp/pip-ephem-wheel-cache-57frxmnr/wheels/67/bb/7f/0dedd6be44bfbe4d1c8db25c8d79fb22a32de2bae19a2d256c
2024-05-23T17:10:34,032 Successfully built biomero
2024-05-23T17:10:34,068 Removed build tracker: '/tmp/pip-build-tracker-b6gfsgnl'