2024-05-31T19:26:20,032 Created temporary directory: /tmp/pip-build-tracker-re0ero4r 2024-05-31T19:26:20,033 Initialized build tracking at /tmp/pip-build-tracker-re0ero4r 2024-05-31T19:26:20,033 Created build tracker: /tmp/pip-build-tracker-re0ero4r 2024-05-31T19:26:20,034 Entered build tracker: /tmp/pip-build-tracker-re0ero4r 2024-05-31T19:26:20,035 Created temporary directory: /tmp/pip-wheel-1ox63jm9 2024-05-31T19:26:20,038 Created temporary directory: /tmp/pip-ephem-wheel-cache-9_r0au56 2024-05-31T19:26:20,060 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-31T19:26:20,063 2 location(s) to search for versions of multiqc: 2024-05-31T19:26:20,063 * https://pypi.org/simple/multiqc/ 2024-05-31T19:26:20,063 * https://www.piwheels.org/simple/multiqc/ 2024-05-31T19:26:20,064 Fetching project page and analyzing links: https://pypi.org/simple/multiqc/ 2024-05-31T19:26:20,065 Getting page https://pypi.org/simple/multiqc/ 2024-05-31T19:26:20,066 Found index url https://pypi.org/simple/ 2024-05-31T19:26:20,275 Fetched page https://pypi.org/simple/multiqc/ as application/vnd.pypi.simple.v1+json 2024-05-31T19:26:20,286 Found link https://files.pythonhosted.org/packages/44/ae/59e74780d4c66afbbac9053d2b6b0f12aaef94e4ce92cb00b71a20025098/multiqc-0.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.1 2024-05-31T19:26:20,286 Found link https://files.pythonhosted.org/packages/e9/7c/14ca085189df0aaba25054bf42fe3ceb74bcbee5c271d4c6f9c9c39bf1c0/multiqc-0.2.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.2.0 2024-05-31T19:26:20,287 Found link https://files.pythonhosted.org/packages/5d/cd/08627e78e84acc038dcab2ee6403af9eca73b1203fe505645a2c33c316b0/multiqc-0.3.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.0 2024-05-31T19:26:20,288 Found link https://files.pythonhosted.org/packages/47/bb/3339d0a27891c241de1bcc76122e779b67efad072140224a02e8700e5199/multiqc-0.3.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.1 2024-05-31T19:26:20,289 Found link https://files.pythonhosted.org/packages/e5/56/76229fca10700a78fe4a51baf2de7385509a48c7d281f42d9d311a547d76/multiqc-0.3.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.3.2 2024-05-31T19:26:20,289 Found link https://files.pythonhosted.org/packages/1c/e0/1e14407025dd461f1917354af543dcd912b669729ce77e0e0d29879d146e/multiqc-0.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.4 2024-05-31T19:26:20,290 Found link https://files.pythonhosted.org/packages/08/1c/d9833670aee1303332713f456140730a7a8335cc97bc7aa3c67f37a3b0e1/multiqc-0.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.5 2024-05-31T19:26:20,291 Found link https://files.pythonhosted.org/packages/23/d9/95a5e62eea95f220007d7a6683d0da1ee1d9f99e6932bcff793b6601ef15/multiqc-0.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.6 2024-05-31T19:26:20,291 Found link https://files.pythonhosted.org/packages/6b/b7/839b0c84448856bd3b2e8c381c4778c4b9c22ded890881d1cd12f9e686fa/multiqc-0.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.7 2024-05-31T19:26:20,292 Found link https://files.pythonhosted.org/packages/ab/e4/9a9eea1facbc3dcb7c90e38d3719eea43d4877aa54a887726982f1ba1671/multiqc-0.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.8 2024-05-31T19:26:20,293 Found link https://files.pythonhosted.org/packages/ca/7b/b65089cad82caa2618298482c6c80967bb22aca5f64a50df91f0a2888172/multiqc-0.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 0.9 2024-05-31T19:26:20,294 Found link https://files.pythonhosted.org/packages/61/79/92c1b7d04f87bf70405cbcd24ae059abd509b19b13b469934125311dbf9f/multiqc-1.0.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.0 2024-05-31T19:26:20,294 Found link https://files.pythonhosted.org/packages/a0/7c/bb475d750a39917218d48fd592be147bbe47f76f6afaeda84e350bd973fb/multiqc-1.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.1 2024-05-31T19:26:20,295 Found link https://files.pythonhosted.org/packages/7e/c5/5b7e713b892ceadfdb23afe74acd9f246298f880fa96a304276a235422b4/multiqc-1.2.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.2 2024-05-31T19:26:20,296 Found link https://files.pythonhosted.org/packages/2c/af/1183857d4f2ade150fb2e22282ff11e6f5355419d129ca4ee7200022177f/multiqc-1.3.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.3 2024-05-31T19:26:20,297 Found link https://files.pythonhosted.org/packages/af/a1/5c5702c4b0ce9ee6fb7d1c982cc6f20832a85bfce184dcb8178f0bdcb5df/multiqc-1.4.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.4 2024-05-31T19:26:20,297 Found link https://files.pythonhosted.org/packages/fa/3e/fbdcbaebadad2110eed3b4212ced58617cbd9badbfc728c5eabc53916b84/multiqc-1.5.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.5 2024-05-31T19:26:20,298 Found link https://files.pythonhosted.org/packages/0c/00/1fd8c0cc80531bf51a1a2b15928a408b0e8a442a6e59236edc2a76371284/multiqc-1.6.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.6 2024-05-31T19:26:20,298 Found link https://files.pythonhosted.org/packages/6b/c7/817d8ef024866e00625d94bbfa26e7a4131eedc166b3d65d7f54ebc90ed6/multiqc-1.7.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.7 2024-05-31T19:26:20,299 Found link https://files.pythonhosted.org/packages/d3/4b/1cf18ef697e5daa72dfa55d496167354e6ec7d78e87c696a52f338c2dc63/multiqc-1.8.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.8 2024-05-31T19:26:20,299 Found link https://files.pythonhosted.org/packages/c8/2d/f0a6be15f861c5d165726d7afecd823ca158dff530b566379623a0e4534b/multiqc-1.9.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.9 2024-05-31T19:26:20,300 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/35/e5/dfccaa54058f2f5d2a83176bfee12ca65d631dba5dadda2a0c52ce25c45f/multiqc-1.10-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,301 Found link https://files.pythonhosted.org/packages/4e/39/cd87ee0581ead995b561635106d47cc9593687a76db9745a093d09fff1d9/multiqc-1.10.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10 2024-05-31T19:26:20,301 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/87/80/2e648984b8080fd65cb7c8eaa948a90ce74e8391828e6f7bdd4d0d137242/multiqc-1.10.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,302 Found link https://files.pythonhosted.org/packages/ca/e7/549a185924157e427b951ac741c1312ee4b324be9585ad323617bb3077a4/multiqc-1.10.1.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.10.1 2024-05-31T19:26:20,303 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/2e/2a/4332775300481391ea5a7a1f35406f83f5812a2734eff5987c462c7e1ec7/multiqc-1.11-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,303 Found link https://files.pythonhosted.org/packages/22/23/3f94ffb423762201bcccf0e0cbf821fccf75673a9fedfb3e7c7ea491024d/multiqc-1.11.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.11 2024-05-31T19:26:20,304 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/08/74/23d79b7df154d5742e5b25b9cdf3cc352445290d90c7cc5fb770ba9911a4/multiqc-1.12-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,305 Found link https://files.pythonhosted.org/packages/6a/f0/122025f4521fd085c07d7a706f08819b4c6bed9e62cfe99453f8c5968ab9/multiqc-1.12.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.12 2024-05-31T19:26:20,306 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/1a/37/35f769e2be82ba3760a62a1cb39af42beee5334efa40cc7e151626e03c91/multiqc-1.13-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,306 Found link https://files.pythonhosted.org/packages/7b/cd/cbd2df3bf899f79ec4b20d5807262dfd3b6ce02245e852ece8dcdad250b1/multiqc-1.13.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.13 2024-05-31T19:26:20,307 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/11/4c/0f85a278cd37406f195115e38281478e9933c50f389b7c4d989af42cb9d1/multiqc-1.14-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,307 Found link https://files.pythonhosted.org/packages/ae/bb/3cb9d23ba28eb96a479161230626e3a11a04fc99899ac341ec949bc38bcb/multiqc-1.14.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.14 2024-05-31T19:26:20,308 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/65/cd/ef0884f0abb38c9662b11f212f463cdb022ef504c512719ccf13d4c728eb/multiqc-1.15-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,309 Found link https://files.pythonhosted.org/packages/ff/96/4ea623b57fef48f6b6c0a89757d53f7b4482b1ab950501617177d5c4a979/multiqc-1.15.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.15 2024-05-31T19:26:20,310 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/e0/6b/f6b8380c75a069c079c7b60b17d1cc0ec1c67a3c9623cfe4ee41a73fa9b4/multiqc-1.16-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,310 Found link https://files.pythonhosted.org/packages/36/3d/cc530c0cdd5c9dfd4e197c8147efa69c7da18023e8ef23d6daba4ac4e13c/multiqc-1.16.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.16 2024-05-31T19:26:20,311 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/a1/a5/2ee5d2546f04ef6addd930de9b772a6ee32151d4632319cde64aef822d50/multiqc-1.17-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,311 Found link https://files.pythonhosted.org/packages/e9/0d/2fc684e101ec6ce82ea5c1eaad1a0ab202fd08f50bee5847ef9e8168b7ad/multiqc-1.17.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.17 2024-05-31T19:26:20,312 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/ec/28/0e526e176fde109e06f0409e940e10893bc2e6e7d5cf91a44a3cf8ea214e/multiqc-1.18-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,312 Found link https://files.pythonhosted.org/packages/a5/17/6ed4268d6bc06489add671e5acbb7d429c97b99391b20d964689044cda77/multiqc-1.18.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.18 2024-05-31T19:26:20,313 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/d6/89/c164b49532afaf3308f809de48c519108592d0b204e368dca2a93b1b956b/multiqc-1.19-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,314 Found link https://files.pythonhosted.org/packages/1d/7c/0b3882a0916151b7877faef0f80ca403e1a7f4fc82b875b2dca32cdb8b89/multiqc-1.19.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.19 2024-05-31T19:26:20,315 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/6e/38/ec1edb7d5337c1bf4763e7ef0bb167ce14802742dff618a2fad3f251fb84/multiqc-1.20-py3-none-any.whl (from https://pypi.org/simple/multiqc/) 2024-05-31T19:26:20,316 Found link https://files.pythonhosted.org/packages/8c/c2/6016a7cb33e904a2637da26065a45198f8ed88bc9461d30a177c130360f8/multiqc-1.20.tar.gz (from https://pypi.org/simple/multiqc/), version: 1.20 2024-05-31T19:26:20,316 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/05/93/f3d9efa1c949050e73a504e350a2f399bcc6c7db30e132e7469ce30cc36c/multiqc-1.21-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,318 Found link https://files.pythonhosted.org/packages/d7/4a/69fa3d76fb71a50c3f0f22a5b4d3fd6db3956f631862804f6524b66122d6/multiqc-1.21.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.21 2024-05-31T19:26:20,318 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/81/bc/5780dd13065676e4b1befca4345e18734a71ebc4f11db0cc1b4b3f325c36/multiqc-1.22-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,319 Found link https://files.pythonhosted.org/packages/b4/60/ed18675ca283a2c7469308399789240f31f2f6f340ed192f264993361a83/multiqc-1.22.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22 2024-05-31T19:26:20,320 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/f6/12/f2dc24575e39d559e759aa02b4fb63d5e1e1a025420d08c497346b229e9c/multiqc-1.22.1-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,322 Found link https://files.pythonhosted.org/packages/6e/fa/2f25f892aaa7ef113f18c546ecdf3439fddd1ab1bfbc2bcd113b9ed2e3b6/multiqc-1.22.1.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22.1 2024-05-31T19:26:20,322 Skipping link: No binaries permitted for multiqc: https://files.pythonhosted.org/packages/65/b7/e3d91164ae9c94ffea6b66db2cf831a6cdde01880a834449eaaa8dc10e75/multiqc-1.22.2-py3-none-any.whl (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,323 Found link https://files.pythonhosted.org/packages/66/cb/0231ed0141cdd68b1dde84027232c0d4aaf4f8ef79187a2de2246e1d83e9/multiqc-1.22.2.tar.gz (from https://pypi.org/simple/multiqc/) (requires-python:>=3.8), version: 1.22.2 2024-05-31T19:26:20,324 Fetching project page and analyzing links: https://www.piwheels.org/simple/multiqc/ 2024-05-31T19:26:20,325 Getting page https://www.piwheels.org/simple/multiqc/ 2024-05-31T19:26:20,327 Found index url https://www.piwheels.org/simple/ 2024-05-31T19:26:20,502 Fetched page https://www.piwheels.org/simple/multiqc/ as text/html 2024-05-31T19:26:20,512 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.22.1-py3-none-any.whl#sha256=6c30c3537fb106035f5ef11d18305211ea1aa76c8b5ec9ecf28abe5423433408 (from https://www.piwheels.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,512 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.22-py3-none-any.whl#sha256=18f07e1a35ccfb9ef4ef2b78fe2cee9ea86c93543d51c7518aa87bdf06a7c0ff (from https://www.piwheels.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,513 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.21-py3-none-any.whl#sha256=66bad70b6b309118590096feb58c3855aa0a646c5828d5162776b3e954dcabb0 (from https://www.piwheels.org/simple/multiqc/) (requires-python:>=3.8) 2024-05-31T19:26:20,514 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.20-py3-none-any.whl#sha256=761b9ace340a048c13c61645e020f0afe3284e1d4bace8fca65fc45c560ccd12 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,514 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.19-py3-none-any.whl#sha256=95392f476f57d4e6409a8840c07548b80fa1ad6a914ec4fd1f0d5ba4674c1f4b (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,515 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.18-py3-none-any.whl#sha256=6571d2a944e15103a4d824a1bada8a8d1d11a5369665b0bcebd80bdb402dac7a (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,515 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.17-py3-none-any.whl#sha256=3dc28a2d049c186d903291a1db4451f0a5a8fef09e66e057baf0acd6179e6263 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,516 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.16-py3-none-any.whl#sha256=03cca6a0517a1d55a342d26623de81f9cac003da50a6fe2e9e8450ce798ec2fa (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,516 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.15-py3-none-any.whl#sha256=b8e2124a3861980ad09b76cddb6765026adbbccf6744750bede1e09f8a938cb5 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,517 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.14-py3-none-any.whl#sha256=77b5c82fcefdd31644526d308c1eb7b7089ad0603a489df6c628cfe8643aa301 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,518 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.13-py3-none-any.whl#sha256=6d6952eddd313ed10111a2a56abf5421e4418808c270c772f6f35ec7523f0976 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,519 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.12-py3-none-any.whl#sha256=67987570ac064a0c09bb6a22e69589384484762af8cac9e4a688f51522a4e8a3 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,519 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.11-py3-none-any.whl#sha256=b2ea91646a12c0e31df6f5d29509d6ab0e371916b55d7f35b3e3a03bdcc0ef3d (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,520 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.10.1-py3-none-any.whl#sha256=213b2a50f377d47c3203aadbe59374e5f392ed700c3c8b99b25a321c6504433b (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,520 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.10-py3-none-any.whl#sha256=d50081f549cebbfd77e5ee016efc19d9860e63e14faac945bebb55707bdcde8d (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,521 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.9-py3-none-any.whl#sha256=28cad8bafce03a40b71bffb8c9d6b0a91b46db72750069b4b2a4760650a1e7ab (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,521 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.8-py3-none-any.whl#sha256=5c1de3fffcfc9ff6ae686c8b47b1bcc3eeab0bcb6ec104fdafbc920c4861fbb7 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,522 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.7-py3-none-any.whl#sha256=78412742db690568f7481fd2e021dc148be2862519e3f193d20cbf957e6f0338 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,522 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.6-py3-none-any.whl#sha256=e1600e93d93041641028f3364fa493f6f35a7b765d5f0aafd73089ace6f062e6 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,523 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.5-py3-none-any.whl#sha256=18ee8675a1f316d459b91049c42fde5061c6ae863063408fa063a4ecbeb0d527 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,524 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.4-py3-none-any.whl#sha256=02e593c71a8c2ed237d3f0138051b8e8c7f7f7c018ecc51b0cf46a17ad8c3f7f (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,524 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.3-py3-none-any.whl#sha256=780ff22fadd86cb81d9afe67c858e478ada911ed296d7d3f430a1da03059f96f (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,525 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.2-py3-none-any.whl#sha256=a2d3ab5bfec00fcaeb2b6b02477683cb026b7e803238094f6ba5706e9911e5db (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,525 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.1-py3-none-any.whl#sha256=17b18b185ba21595f7b6ab85364b590b11f5b90666bedd3fef8779d986b8783b (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,526 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-1.0-py3-none-any.whl#sha256=24119737c52e447f7913e17ef08e0a0e7218dd10ac535aa8eddb5181906eca44 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,527 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.9-py3-none-any.whl#sha256=8e08076a99a715a117ba6a56d8d23be94585467dff12235fde06aa32894f3588 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,527 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.8-py3-none-any.whl#sha256=24d31f7b916c4c11cb816a515f858d222d26027a5938cef4f0c3f52ad37e3329 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,528 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.7-py3-none-any.whl#sha256=27df9fe1e307b2b16f157f3a1548b69b44f18346fdd66794327008ade6ab90db (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,528 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.6-py3-none-any.whl#sha256=14044c5aa5f26ae68a9f1c47423f113e7a0d3e95d5b16dd4dcad1df4f7621982 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,529 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.5-py3-none-any.whl#sha256=5528eef1c13487a576717815ce7548964978e93f4668d414eb835d0267cd84ff (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,529 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.4-py3-none-any.whl#sha256=f67c3af42d83144411f956e962f736ef90b3e1946dd279ae47720a5142dd9a23 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,530 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.2-py3-none-any.whl#sha256=ca3e9c65ab5f1290d0e5ce999ac078ec0b75633ac8b64bc38f79d41a442f0147 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,530 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.1-py3-none-any.whl#sha256=e3fcc96c755277a57d0e7b1b8fac3256ff45b164d7a77655e169f54983470565 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,531 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.3.0-py3-none-any.whl#sha256=d1c8d281f8a75ded36ccdafbc131072a3ee9a5ddd896d32dd22f9945141a6b12 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,532 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.2.0-py3-none-any.whl#sha256=1ec95a9f8508ed8aee9eb0c6f7f3f77f6d477bf1405395854a1e2a1d2b5ea053 (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,532 Skipping link: No binaries permitted for multiqc: https://www.piwheels.org/simple/multiqc/multiqc-0.1-py3-none-any.whl#sha256=aadbe1a0321716289d4557925ecb20ef7bb769a99c42ac213284f8c0af4eb0ea (from https://www.piwheels.org/simple/multiqc/) 2024-05-31T19:26:20,533 Skipping link: not a file: https://www.piwheels.org/simple/multiqc/ 2024-05-31T19:26:20,533 Skipping link: not a file: https://pypi.org/simple/multiqc/ 2024-05-31T19:26:20,556 Given no hashes to check 1 links for project 'multiqc': discarding no candidates 2024-05-31T19:26:20,574 Collecting multiqc==1.22.2 2024-05-31T19:26:20,576 Created temporary directory: /tmp/pip-unpack-g2mveoz1 2024-05-31T19:26:21,059 Downloading multiqc-1.22.2.tar.gz (4.2 MB) 2024-05-31T19:26:23,372 Added multiqc==1.22.2 from https://files.pythonhosted.org/packages/66/cb/0231ed0141cdd68b1dde84027232c0d4aaf4f8ef79187a2de2246e1d83e9/multiqc-1.22.2.tar.gz to build tracker '/tmp/pip-build-tracker-re0ero4r' 2024-05-31T19:26:23,382 Created temporary directory: /tmp/pip-build-env-mt7br9rt 2024-05-31T19:26:23,387 Installing build dependencies: started 2024-05-31T19:26:23,388 Running command pip subprocess to install build dependencies 2024-05-31T19:26:24,538 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-31T19:26:25,038 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-31T19:26:26,716 Collecting setuptools 2024-05-31T19:26:26,733 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB) 2024-05-31T19:26:29,322 Installing collected packages: setuptools 2024-05-31T19:26:32,007 Successfully installed setuptools-70.0.0 2024-05-31T19:26:32,612 Installing build dependencies: finished with status 'done' 2024-05-31T19:26:32,616 Getting requirements to build wheel: started 2024-05-31T19:26:32,618 Running command Getting requirements to build wheel 2024-05-31T19:26:34,261 running egg_info 2024-05-31T19:26:34,265 writing multiqc.egg-info/PKG-INFO 2024-05-31T19:26:34,274 writing dependency_links to multiqc.egg-info/dependency_links.txt 2024-05-31T19:26:34,281 writing entry points to multiqc.egg-info/entry_points.txt 2024-05-31T19:26:34,285 writing requirements to multiqc.egg-info/requires.txt 2024-05-31T19:26:34,287 writing top-level names to multiqc.egg-info/top_level.txt 2024-05-31T19:26:34,304 reading manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:34,463 reading manifest template 'MANIFEST.in' 2024-05-31T19:26:35,061 adding license file 'LICENSE' 2024-05-31T19:26:35,085 writing manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:35,200 Getting requirements to build wheel: finished with status 'done' 2024-05-31T19:26:35,210 Installing backend dependencies: started 2024-05-31T19:26:35,211 Running command pip subprocess to install backend dependencies 2024-05-31T19:26:36,353 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-31T19:26:36,826 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-31T19:26:37,343 Collecting wheel 2024-05-31T19:26:37,357 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-05-31T19:26:39,619 Installing collected packages: wheel 2024-05-31T19:26:39,841 Creating /tmp/pip-build-env-mt7br9rt/normal/local/bin 2024-05-31T19:26:39,843 changing mode of /tmp/pip-build-env-mt7br9rt/normal/local/bin/wheel to 755 2024-05-31T19:26:39,855 Successfully installed wheel-0.43.0 2024-05-31T19:26:40,326 Installing backend dependencies: finished with status 'done' 2024-05-31T19:26:40,328 Created temporary directory: /tmp/pip-modern-metadata-gyq9gyjn 2024-05-31T19:26:40,330 Preparing metadata (pyproject.toml): started 2024-05-31T19:26:40,331 Running command Preparing metadata (pyproject.toml) 2024-05-31T19:26:41,145 running dist_info 2024-05-31T19:26:41,150 creating /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info 2024-05-31T19:26:41,154 writing /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/PKG-INFO 2024-05-31T19:26:41,163 writing dependency_links to /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/dependency_links.txt 2024-05-31T19:26:41,170 writing entry points to /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/entry_points.txt 2024-05-31T19:26:41,173 writing requirements to /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/requires.txt 2024-05-31T19:26:41,174 writing top-level names to /tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/top_level.txt 2024-05-31T19:26:41,175 writing manifest file '/tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:41,189 reading manifest file '/tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:41,191 reading manifest template 'MANIFEST.in' 2024-05-31T19:26:41,457 adding license file 'LICENSE' 2024-05-31T19:26:41,474 writing manifest file '/tmp/pip-modern-metadata-gyq9gyjn/multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:41,476 creating '/tmp/pip-modern-metadata-gyq9gyjn/multiqc-1.22.2.dist-info' 2024-05-31T19:26:41,642 Preparing metadata (pyproject.toml): finished with status 'done' 2024-05-31T19:26:41,653 Source in /tmp/pip-wheel-1ox63jm9/multiqc_c1231fa69f80432cb0cfd45f56053fb8 has version 1.22.2, which satisfies requirement multiqc==1.22.2 from https://files.pythonhosted.org/packages/66/cb/0231ed0141cdd68b1dde84027232c0d4aaf4f8ef79187a2de2246e1d83e9/multiqc-1.22.2.tar.gz 2024-05-31T19:26:41,655 Removed multiqc==1.22.2 from https://files.pythonhosted.org/packages/66/cb/0231ed0141cdd68b1dde84027232c0d4aaf4f8ef79187a2de2246e1d83e9/multiqc-1.22.2.tar.gz from build tracker '/tmp/pip-build-tracker-re0ero4r' 2024-05-31T19:26:41,673 Created temporary directory: /tmp/pip-unpack-d8sxdd2c 2024-05-31T19:26:41,674 Created temporary directory: /tmp/pip-unpack-oqm8g7vc 2024-05-31T19:26:41,718 Building wheels for collected packages: multiqc 2024-05-31T19:26:41,722 Created temporary directory: /tmp/pip-wheel-o1g5l5gr 2024-05-31T19:26:41,723 Destination directory: /tmp/pip-wheel-o1g5l5gr 2024-05-31T19:26:41,728 Building wheel for multiqc (pyproject.toml): started 2024-05-31T19:26:41,729 Running command Building wheel for multiqc (pyproject.toml) 2024-05-31T19:26:42,497 running bdist_wheel 2024-05-31T19:26:42,512 running build 2024-05-31T19:26:42,513 running build_py 2024-05-31T19:26:42,517 creating build 2024-05-31T19:26:42,518 creating build/lib 2024-05-31T19:26:42,518 creating build/lib/multiqc 2024-05-31T19:26:42,520 copying multiqc/__init__.py -> build/lib/multiqc 2024-05-31T19:26:42,522 copying multiqc/config.py -> build/lib/multiqc 2024-05-31T19:26:42,524 copying multiqc/multiqc.py -> build/lib/multiqc 2024-05-31T19:26:42,527 copying multiqc/base_module.py -> build/lib/multiqc 2024-05-31T19:26:42,530 copying multiqc/__main__.py -> build/lib/multiqc 2024-05-31T19:26:42,531 copying multiqc/report.py -> build/lib/multiqc 2024-05-31T19:26:42,534 copying multiqc/interactive.py -> build/lib/multiqc 2024-05-31T19:26:42,536 running egg_info 2024-05-31T19:26:42,540 writing multiqc.egg-info/PKG-INFO 2024-05-31T19:26:42,546 writing dependency_links to multiqc.egg-info/dependency_links.txt 2024-05-31T19:26:42,553 writing entry points to multiqc.egg-info/entry_points.txt 2024-05-31T19:26:42,555 writing requirements to multiqc.egg-info/requires.txt 2024-05-31T19:26:42,556 writing top-level names to multiqc.egg-info/top_level.txt 2024-05-31T19:26:42,563 reading manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:42,576 reading manifest template 'MANIFEST.in' 2024-05-31T19:26:42,831 adding license file 'LICENSE' 2024-05-31T19:26:42,855 writing manifest file 'multiqc.egg-info/SOURCES.txt' 2024-05-31T19:26:42,858 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.core' is absent from the `packages` configuration. 2024-05-31T19:26:42,858 !! 2024-05-31T19:26:42,859 ******************************************************************************** 2024-05-31T19:26:42,860 ############################ 2024-05-31T19:26:42,861 # Package would be ignored # 2024-05-31T19:26:42,861 ############################ 2024-05-31T19:26:42,862 Python recognizes 'multiqc.core' as an importable package[^1], 2024-05-31T19:26:42,862 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,863 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,864 package, please make sure that 'multiqc.core' is explicitly added 2024-05-31T19:26:42,864 to the `packages` configuration field. 2024-05-31T19:26:42,865 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,866 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,867 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,867 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,869 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,870 If you don't want 'multiqc.core' to be distributed and are 2024-05-31T19:26:42,870 already explicitly excluding 'multiqc.core' via 2024-05-31T19:26:42,871 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,872 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,872 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,873 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,874 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,875 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,875 even if it does not contain any `.py` files. 2024-05-31T19:26:42,876 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,876 directory, all directories are treated like packages. 2024-05-31T19:26:42,876 ******************************************************************************** 2024-05-31T19:26:42,877 !! 2024-05-31T19:26:42,878 check.warn(importable) 2024-05-31T19:26:42,878 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules' is absent from the `packages` configuration. 2024-05-31T19:26:42,879 !! 2024-05-31T19:26:42,879 ******************************************************************************** 2024-05-31T19:26:42,880 ############################ 2024-05-31T19:26:42,880 # Package would be ignored # 2024-05-31T19:26:42,881 ############################ 2024-05-31T19:26:42,881 Python recognizes 'multiqc.modules' as an importable package[^1], 2024-05-31T19:26:42,882 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,883 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,883 package, please make sure that 'multiqc.modules' is explicitly added 2024-05-31T19:26:42,884 to the `packages` configuration field. 2024-05-31T19:26:42,885 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,885 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,886 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,886 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,887 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,888 If you don't want 'multiqc.modules' to be distributed and are 2024-05-31T19:26:42,889 already explicitly excluding 'multiqc.modules' via 2024-05-31T19:26:42,889 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,890 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,890 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,891 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,892 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,893 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,894 even if it does not contain any `.py` files. 2024-05-31T19:26:42,894 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,895 directory, all directories are treated like packages. 2024-05-31T19:26:42,895 ******************************************************************************** 2024-05-31T19:26:42,896 !! 2024-05-31T19:26:42,897 check.warn(importable) 2024-05-31T19:26:42,897 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.adapterremoval' is absent from the `packages` configuration. 2024-05-31T19:26:42,898 !! 2024-05-31T19:26:42,899 ******************************************************************************** 2024-05-31T19:26:42,899 ############################ 2024-05-31T19:26:42,900 # Package would be ignored # 2024-05-31T19:26:42,900 ############################ 2024-05-31T19:26:42,900 Python recognizes 'multiqc.modules.adapterremoval' as an importable package[^1], 2024-05-31T19:26:42,900 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,901 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,902 package, please make sure that 'multiqc.modules.adapterremoval' is explicitly added 2024-05-31T19:26:42,902 to the `packages` configuration field. 2024-05-31T19:26:42,903 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,903 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,904 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,904 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,905 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,906 If you don't want 'multiqc.modules.adapterremoval' to be distributed and are 2024-05-31T19:26:42,907 already explicitly excluding 'multiqc.modules.adapterremoval' via 2024-05-31T19:26:42,907 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,907 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,908 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,908 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,909 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,910 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,911 even if it does not contain any `.py` files. 2024-05-31T19:26:42,911 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,912 directory, all directories are treated like packages. 2024-05-31T19:26:42,912 ******************************************************************************** 2024-05-31T19:26:42,913 !! 2024-05-31T19:26:42,914 check.warn(importable) 2024-05-31T19:26:42,914 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.afterqc' is absent from the `packages` configuration. 2024-05-31T19:26:42,915 !! 2024-05-31T19:26:42,915 ******************************************************************************** 2024-05-31T19:26:42,916 ############################ 2024-05-31T19:26:42,916 # Package would be ignored # 2024-05-31T19:26:42,917 ############################ 2024-05-31T19:26:42,917 Python recognizes 'multiqc.modules.afterqc' as an importable package[^1], 2024-05-31T19:26:42,918 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,919 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,919 package, please make sure that 'multiqc.modules.afterqc' is explicitly added 2024-05-31T19:26:42,919 to the `packages` configuration field. 2024-05-31T19:26:42,920 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,921 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,921 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,922 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,923 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,923 If you don't want 'multiqc.modules.afterqc' to be distributed and are 2024-05-31T19:26:42,924 already explicitly excluding 'multiqc.modules.afterqc' via 2024-05-31T19:26:42,924 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,925 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,925 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,926 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,927 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,928 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,929 even if it does not contain any `.py` files. 2024-05-31T19:26:42,929 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,929 directory, all directories are treated like packages. 2024-05-31T19:26:42,930 ******************************************************************************** 2024-05-31T19:26:42,931 !! 2024-05-31T19:26:42,931 check.warn(importable) 2024-05-31T19:26:42,931 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.anglerfish' is absent from the `packages` configuration. 2024-05-31T19:26:42,932 !! 2024-05-31T19:26:42,933 ******************************************************************************** 2024-05-31T19:26:42,933 ############################ 2024-05-31T19:26:42,934 # Package would be ignored # 2024-05-31T19:26:42,934 ############################ 2024-05-31T19:26:42,934 Python recognizes 'multiqc.modules.anglerfish' as an importable package[^1], 2024-05-31T19:26:42,935 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,936 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,936 package, please make sure that 'multiqc.modules.anglerfish' is explicitly added 2024-05-31T19:26:42,937 to the `packages` configuration field. 2024-05-31T19:26:42,938 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,938 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,939 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,940 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,940 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,941 If you don't want 'multiqc.modules.anglerfish' to be distributed and are 2024-05-31T19:26:42,942 already explicitly excluding 'multiqc.modules.anglerfish' via 2024-05-31T19:26:42,942 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,943 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,943 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,944 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,945 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,946 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,947 even if it does not contain any `.py` files. 2024-05-31T19:26:42,947 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,948 directory, all directories are treated like packages. 2024-05-31T19:26:42,949 ******************************************************************************** 2024-05-31T19:26:42,950 !! 2024-05-31T19:26:42,950 check.warn(importable) 2024-05-31T19:26:42,951 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bakta' is absent from the `packages` configuration. 2024-05-31T19:26:42,951 !! 2024-05-31T19:26:42,952 ******************************************************************************** 2024-05-31T19:26:42,952 ############################ 2024-05-31T19:26:42,952 # Package would be ignored # 2024-05-31T19:26:42,953 ############################ 2024-05-31T19:26:42,953 Python recognizes 'multiqc.modules.bakta' as an importable package[^1], 2024-05-31T19:26:42,953 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,954 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,955 package, please make sure that 'multiqc.modules.bakta' is explicitly added 2024-05-31T19:26:42,955 to the `packages` configuration field. 2024-05-31T19:26:42,956 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,956 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,957 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,958 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,959 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,960 If you don't want 'multiqc.modules.bakta' to be distributed and are 2024-05-31T19:26:42,960 already explicitly excluding 'multiqc.modules.bakta' via 2024-05-31T19:26:42,960 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,961 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,961 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,962 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,963 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,964 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,965 even if it does not contain any `.py` files. 2024-05-31T19:26:42,965 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,966 directory, all directories are treated like packages. 2024-05-31T19:26:42,966 ******************************************************************************** 2024-05-31T19:26:42,967 !! 2024-05-31T19:26:42,967 check.warn(importable) 2024-05-31T19:26:42,968 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bamdst' is absent from the `packages` configuration. 2024-05-31T19:26:42,968 !! 2024-05-31T19:26:42,969 ******************************************************************************** 2024-05-31T19:26:42,970 ############################ 2024-05-31T19:26:42,970 # Package would be ignored # 2024-05-31T19:26:42,971 ############################ 2024-05-31T19:26:42,971 Python recognizes 'multiqc.modules.bamdst' as an importable package[^1], 2024-05-31T19:26:42,971 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,972 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,973 package, please make sure that 'multiqc.modules.bamdst' is explicitly added 2024-05-31T19:26:42,973 to the `packages` configuration field. 2024-05-31T19:26:42,975 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,975 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,975 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,976 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,977 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,978 If you don't want 'multiqc.modules.bamdst' to be distributed and are 2024-05-31T19:26:42,978 already explicitly excluding 'multiqc.modules.bamdst' via 2024-05-31T19:26:42,978 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,979 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,979 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,980 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,980 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:42,982 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:42,982 even if it does not contain any `.py` files. 2024-05-31T19:26:42,983 On the other hand, currently there is no concept of package data 2024-05-31T19:26:42,983 directory, all directories are treated like packages. 2024-05-31T19:26:42,983 ******************************************************************************** 2024-05-31T19:26:42,984 !! 2024-05-31T19:26:42,985 check.warn(importable) 2024-05-31T19:26:42,985 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bamtools' is absent from the `packages` configuration. 2024-05-31T19:26:42,986 !! 2024-05-31T19:26:42,986 ******************************************************************************** 2024-05-31T19:26:42,987 ############################ 2024-05-31T19:26:42,987 # Package would be ignored # 2024-05-31T19:26:42,988 ############################ 2024-05-31T19:26:42,988 Python recognizes 'multiqc.modules.bamtools' as an importable package[^1], 2024-05-31T19:26:42,989 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:42,990 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:42,990 package, please make sure that 'multiqc.modules.bamtools' is explicitly added 2024-05-31T19:26:42,991 to the `packages` configuration field. 2024-05-31T19:26:42,991 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:42,992 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:42,992 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:42,993 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:42,994 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:42,995 If you don't want 'multiqc.modules.bamtools' to be distributed and are 2024-05-31T19:26:42,996 already explicitly excluding 'multiqc.modules.bamtools' via 2024-05-31T19:26:42,996 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:42,996 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:42,997 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:42,998 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:42,999 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,000 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,000 even if it does not contain any `.py` files. 2024-05-31T19:26:43,000 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,001 directory, all directories are treated like packages. 2024-05-31T19:26:43,001 ******************************************************************************** 2024-05-31T19:26:43,002 !! 2024-05-31T19:26:43,002 check.warn(importable) 2024-05-31T19:26:43,003 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bbduk' is absent from the `packages` configuration. 2024-05-31T19:26:43,003 !! 2024-05-31T19:26:43,004 ******************************************************************************** 2024-05-31T19:26:43,004 ############################ 2024-05-31T19:26:43,005 # Package would be ignored # 2024-05-31T19:26:43,005 ############################ 2024-05-31T19:26:43,006 Python recognizes 'multiqc.modules.bbduk' as an importable package[^1], 2024-05-31T19:26:43,006 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,007 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,007 package, please make sure that 'multiqc.modules.bbduk' is explicitly added 2024-05-31T19:26:43,008 to the `packages` configuration field. 2024-05-31T19:26:43,009 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,009 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,010 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,010 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,011 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,012 If you don't want 'multiqc.modules.bbduk' to be distributed and are 2024-05-31T19:26:43,012 already explicitly excluding 'multiqc.modules.bbduk' via 2024-05-31T19:26:43,013 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,013 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,014 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,015 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,015 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,017 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,017 even if it does not contain any `.py` files. 2024-05-31T19:26:43,018 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,018 directory, all directories are treated like packages. 2024-05-31T19:26:43,019 ******************************************************************************** 2024-05-31T19:26:43,020 !! 2024-05-31T19:26:43,020 check.warn(importable) 2024-05-31T19:26:43,021 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bbmap' is absent from the `packages` configuration. 2024-05-31T19:26:43,021 !! 2024-05-31T19:26:43,022 ******************************************************************************** 2024-05-31T19:26:43,023 ############################ 2024-05-31T19:26:43,023 # Package would be ignored # 2024-05-31T19:26:43,024 ############################ 2024-05-31T19:26:43,024 Python recognizes 'multiqc.modules.bbmap' as an importable package[^1], 2024-05-31T19:26:43,025 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,025 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,026 package, please make sure that 'multiqc.modules.bbmap' is explicitly added 2024-05-31T19:26:43,026 to the `packages` configuration field. 2024-05-31T19:26:43,027 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,027 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,027 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,028 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,029 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,029 If you don't want 'multiqc.modules.bbmap' to be distributed and are 2024-05-31T19:26:43,030 already explicitly excluding 'multiqc.modules.bbmap' via 2024-05-31T19:26:43,030 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,031 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,031 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,032 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,032 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,034 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,034 even if it does not contain any `.py` files. 2024-05-31T19:26:43,035 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,035 directory, all directories are treated like packages. 2024-05-31T19:26:43,035 ******************************************************************************** 2024-05-31T19:26:43,036 !! 2024-05-31T19:26:43,037 check.warn(importable) 2024-05-31T19:26:43,037 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bcftools' is absent from the `packages` configuration. 2024-05-31T19:26:43,038 !! 2024-05-31T19:26:43,038 ******************************************************************************** 2024-05-31T19:26:43,039 ############################ 2024-05-31T19:26:43,039 # Package would be ignored # 2024-05-31T19:26:43,040 ############################ 2024-05-31T19:26:43,040 Python recognizes 'multiqc.modules.bcftools' as an importable package[^1], 2024-05-31T19:26:43,041 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,041 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,042 package, please make sure that 'multiqc.modules.bcftools' is explicitly added 2024-05-31T19:26:43,042 to the `packages` configuration field. 2024-05-31T19:26:43,043 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,044 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,044 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,045 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,046 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,047 If you don't want 'multiqc.modules.bcftools' to be distributed and are 2024-05-31T19:26:43,048 already explicitly excluding 'multiqc.modules.bcftools' via 2024-05-31T19:26:43,048 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,048 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,049 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,049 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,050 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,051 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,051 even if it does not contain any `.py` files. 2024-05-31T19:26:43,052 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,052 directory, all directories are treated like packages. 2024-05-31T19:26:43,052 ******************************************************************************** 2024-05-31T19:26:43,053 !! 2024-05-31T19:26:43,054 check.warn(importable) 2024-05-31T19:26:43,054 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bcl2fastq' is absent from the `packages` configuration. 2024-05-31T19:26:43,054 !! 2024-05-31T19:26:43,055 ******************************************************************************** 2024-05-31T19:26:43,056 ############################ 2024-05-31T19:26:43,056 # Package would be ignored # 2024-05-31T19:26:43,056 ############################ 2024-05-31T19:26:43,057 Python recognizes 'multiqc.modules.bcl2fastq' as an importable package[^1], 2024-05-31T19:26:43,057 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,058 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,058 package, please make sure that 'multiqc.modules.bcl2fastq' is explicitly added 2024-05-31T19:26:43,059 to the `packages` configuration field. 2024-05-31T19:26:43,059 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,060 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,060 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,061 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,062 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,063 If you don't want 'multiqc.modules.bcl2fastq' to be distributed and are 2024-05-31T19:26:43,063 already explicitly excluding 'multiqc.modules.bcl2fastq' via 2024-05-31T19:26:43,064 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,064 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,065 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,066 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,066 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,068 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,068 even if it does not contain any `.py` files. 2024-05-31T19:26:43,068 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,069 directory, all directories are treated like packages. 2024-05-31T19:26:43,070 ******************************************************************************** 2024-05-31T19:26:43,071 !! 2024-05-31T19:26:43,071 check.warn(importable) 2024-05-31T19:26:43,072 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bclconvert' is absent from the `packages` configuration. 2024-05-31T19:26:43,072 !! 2024-05-31T19:26:43,073 ******************************************************************************** 2024-05-31T19:26:43,073 ############################ 2024-05-31T19:26:43,074 # Package would be ignored # 2024-05-31T19:26:43,074 ############################ 2024-05-31T19:26:43,074 Python recognizes 'multiqc.modules.bclconvert' as an importable package[^1], 2024-05-31T19:26:43,075 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,076 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,076 package, please make sure that 'multiqc.modules.bclconvert' is explicitly added 2024-05-31T19:26:43,076 to the `packages` configuration field. 2024-05-31T19:26:43,077 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,078 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,078 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,079 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,080 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,081 If you don't want 'multiqc.modules.bclconvert' to be distributed and are 2024-05-31T19:26:43,081 already explicitly excluding 'multiqc.modules.bclconvert' via 2024-05-31T19:26:43,082 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,083 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,083 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,085 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,086 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,087 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,088 even if it does not contain any `.py` files. 2024-05-31T19:26:43,088 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,088 directory, all directories are treated like packages. 2024-05-31T19:26:43,089 ******************************************************************************** 2024-05-31T19:26:43,090 !! 2024-05-31T19:26:43,090 check.warn(importable) 2024-05-31T19:26:43,091 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biobambam2' is absent from the `packages` configuration. 2024-05-31T19:26:43,091 !! 2024-05-31T19:26:43,092 ******************************************************************************** 2024-05-31T19:26:43,093 ############################ 2024-05-31T19:26:43,093 # Package would be ignored # 2024-05-31T19:26:43,094 ############################ 2024-05-31T19:26:43,094 Python recognizes 'multiqc.modules.biobambam2' as an importable package[^1], 2024-05-31T19:26:43,095 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,096 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,096 package, please make sure that 'multiqc.modules.biobambam2' is explicitly added 2024-05-31T19:26:43,097 to the `packages` configuration field. 2024-05-31T19:26:43,098 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,098 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,099 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,100 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,100 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,101 If you don't want 'multiqc.modules.biobambam2' to be distributed and are 2024-05-31T19:26:43,101 already explicitly excluding 'multiqc.modules.biobambam2' via 2024-05-31T19:26:43,102 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,102 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,103 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,103 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,104 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,105 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,106 even if it does not contain any `.py` files. 2024-05-31T19:26:43,106 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,107 directory, all directories are treated like packages. 2024-05-31T19:26:43,107 ******************************************************************************** 2024-05-31T19:26:43,108 !! 2024-05-31T19:26:43,108 check.warn(importable) 2024-05-31T19:26:43,109 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biobloomtools' is absent from the `packages` configuration. 2024-05-31T19:26:43,109 !! 2024-05-31T19:26:43,110 ******************************************************************************** 2024-05-31T19:26:43,111 ############################ 2024-05-31T19:26:43,111 # Package would be ignored # 2024-05-31T19:26:43,111 ############################ 2024-05-31T19:26:43,112 Python recognizes 'multiqc.modules.biobloomtools' as an importable package[^1], 2024-05-31T19:26:43,112 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,113 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,114 package, please make sure that 'multiqc.modules.biobloomtools' is explicitly added 2024-05-31T19:26:43,114 to the `packages` configuration field. 2024-05-31T19:26:43,115 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,116 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,116 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,117 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,118 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,119 If you don't want 'multiqc.modules.biobloomtools' to be distributed and are 2024-05-31T19:26:43,120 already explicitly excluding 'multiqc.modules.biobloomtools' via 2024-05-31T19:26:43,120 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,121 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,122 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,123 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,125 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,126 even if it does not contain any `.py` files. 2024-05-31T19:26:43,126 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,127 directory, all directories are treated like packages. 2024-05-31T19:26:43,127 ******************************************************************************** 2024-05-31T19:26:43,128 !! 2024-05-31T19:26:43,128 check.warn(importable) 2024-05-31T19:26:43,129 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.biscuit' is absent from the `packages` configuration. 2024-05-31T19:26:43,129 !! 2024-05-31T19:26:43,130 ******************************************************************************** 2024-05-31T19:26:43,130 ############################ 2024-05-31T19:26:43,131 # Package would be ignored # 2024-05-31T19:26:43,131 ############################ 2024-05-31T19:26:43,132 Python recognizes 'multiqc.modules.biscuit' as an importable package[^1], 2024-05-31T19:26:43,132 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,133 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,133 package, please make sure that 'multiqc.modules.biscuit' is explicitly added 2024-05-31T19:26:43,134 to the `packages` configuration field. 2024-05-31T19:26:43,134 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,135 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,135 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,136 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,137 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,138 If you don't want 'multiqc.modules.biscuit' to be distributed and are 2024-05-31T19:26:43,138 already explicitly excluding 'multiqc.modules.biscuit' via 2024-05-31T19:26:43,139 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,139 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,140 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,141 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,142 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,143 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,143 even if it does not contain any `.py` files. 2024-05-31T19:26:43,144 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,144 directory, all directories are treated like packages. 2024-05-31T19:26:43,145 ******************************************************************************** 2024-05-31T19:26:43,146 !! 2024-05-31T19:26:43,147 check.warn(importable) 2024-05-31T19:26:43,147 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bismark' is absent from the `packages` configuration. 2024-05-31T19:26:43,148 !! 2024-05-31T19:26:43,149 ******************************************************************************** 2024-05-31T19:26:43,149 ############################ 2024-05-31T19:26:43,150 # Package would be ignored # 2024-05-31T19:26:43,150 ############################ 2024-05-31T19:26:43,151 Python recognizes 'multiqc.modules.bismark' as an importable package[^1], 2024-05-31T19:26:43,151 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,152 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,152 package, please make sure that 'multiqc.modules.bismark' is explicitly added 2024-05-31T19:26:43,153 to the `packages` configuration field. 2024-05-31T19:26:43,153 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,154 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,154 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,155 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,155 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,156 If you don't want 'multiqc.modules.bismark' to be distributed and are 2024-05-31T19:26:43,157 already explicitly excluding 'multiqc.modules.bismark' via 2024-05-31T19:26:43,157 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,158 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,158 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,159 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,160 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,162 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,162 even if it does not contain any `.py` files. 2024-05-31T19:26:43,163 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,163 directory, all directories are treated like packages. 2024-05-31T19:26:43,164 ******************************************************************************** 2024-05-31T19:26:43,165 !! 2024-05-31T19:26:43,165 check.warn(importable) 2024-05-31T19:26:43,166 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bowtie1' is absent from the `packages` configuration. 2024-05-31T19:26:43,166 !! 2024-05-31T19:26:43,167 ******************************************************************************** 2024-05-31T19:26:43,167 ############################ 2024-05-31T19:26:43,168 # Package would be ignored # 2024-05-31T19:26:43,168 ############################ 2024-05-31T19:26:43,169 Python recognizes 'multiqc.modules.bowtie1' as an importable package[^1], 2024-05-31T19:26:43,170 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,171 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,171 package, please make sure that 'multiqc.modules.bowtie1' is explicitly added 2024-05-31T19:26:43,172 to the `packages` configuration field. 2024-05-31T19:26:43,173 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,173 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,174 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,175 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,176 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,177 If you don't want 'multiqc.modules.bowtie1' to be distributed and are 2024-05-31T19:26:43,177 already explicitly excluding 'multiqc.modules.bowtie1' via 2024-05-31T19:26:43,178 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,178 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,179 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,180 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,180 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,181 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,182 even if it does not contain any `.py` files. 2024-05-31T19:26:43,182 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,183 directory, all directories are treated like packages. 2024-05-31T19:26:43,183 ******************************************************************************** 2024-05-31T19:26:43,184 !! 2024-05-31T19:26:43,184 check.warn(importable) 2024-05-31T19:26:43,185 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bowtie2' is absent from the `packages` configuration. 2024-05-31T19:26:43,185 !! 2024-05-31T19:26:43,186 ******************************************************************************** 2024-05-31T19:26:43,187 ############################ 2024-05-31T19:26:43,187 # Package would be ignored # 2024-05-31T19:26:43,188 ############################ 2024-05-31T19:26:43,188 Python recognizes 'multiqc.modules.bowtie2' as an importable package[^1], 2024-05-31T19:26:43,188 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,189 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,190 package, please make sure that 'multiqc.modules.bowtie2' is explicitly added 2024-05-31T19:26:43,190 to the `packages` configuration field. 2024-05-31T19:26:43,191 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,191 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,192 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,193 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,194 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,195 If you don't want 'multiqc.modules.bowtie2' to be distributed and are 2024-05-31T19:26:43,195 already explicitly excluding 'multiqc.modules.bowtie2' via 2024-05-31T19:26:43,196 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,196 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,197 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,198 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,199 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,201 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,201 even if it does not contain any `.py` files. 2024-05-31T19:26:43,202 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,202 directory, all directories are treated like packages. 2024-05-31T19:26:43,203 ******************************************************************************** 2024-05-31T19:26:43,204 !! 2024-05-31T19:26:43,204 check.warn(importable) 2024-05-31T19:26:43,205 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bracken' is absent from the `packages` configuration. 2024-05-31T19:26:43,205 !! 2024-05-31T19:26:43,206 ******************************************************************************** 2024-05-31T19:26:43,206 ############################ 2024-05-31T19:26:43,207 # Package would be ignored # 2024-05-31T19:26:43,207 ############################ 2024-05-31T19:26:43,207 Python recognizes 'multiqc.modules.bracken' as an importable package[^1], 2024-05-31T19:26:43,208 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,208 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,209 package, please make sure that 'multiqc.modules.bracken' is explicitly added 2024-05-31T19:26:43,209 to the `packages` configuration field. 2024-05-31T19:26:43,210 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,210 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,211 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,212 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,212 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,213 If you don't want 'multiqc.modules.bracken' to be distributed and are 2024-05-31T19:26:43,214 already explicitly excluding 'multiqc.modules.bracken' via 2024-05-31T19:26:43,214 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,214 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,215 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,216 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,217 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,218 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,219 even if it does not contain any `.py` files. 2024-05-31T19:26:43,219 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,219 directory, all directories are treated like packages. 2024-05-31T19:26:43,220 ******************************************************************************** 2024-05-31T19:26:43,221 !! 2024-05-31T19:26:43,221 check.warn(importable) 2024-05-31T19:26:43,222 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.busco' is absent from the `packages` configuration. 2024-05-31T19:26:43,222 !! 2024-05-31T19:26:43,223 ******************************************************************************** 2024-05-31T19:26:43,223 ############################ 2024-05-31T19:26:43,224 # Package would be ignored # 2024-05-31T19:26:43,224 ############################ 2024-05-31T19:26:43,225 Python recognizes 'multiqc.modules.busco' as an importable package[^1], 2024-05-31T19:26:43,225 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,226 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,227 package, please make sure that 'multiqc.modules.busco' is explicitly added 2024-05-31T19:26:43,227 to the `packages` configuration field. 2024-05-31T19:26:43,228 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,229 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,229 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,231 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,232 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,233 If you don't want 'multiqc.modules.busco' to be distributed and are 2024-05-31T19:26:43,233 already explicitly excluding 'multiqc.modules.busco' via 2024-05-31T19:26:43,234 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,234 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,234 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,235 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,236 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,237 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,237 even if it does not contain any `.py` files. 2024-05-31T19:26:43,237 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,238 directory, all directories are treated like packages. 2024-05-31T19:26:43,238 ******************************************************************************** 2024-05-31T19:26:43,239 !! 2024-05-31T19:26:43,239 check.warn(importable) 2024-05-31T19:26:43,240 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.bustools' is absent from the `packages` configuration. 2024-05-31T19:26:43,240 !! 2024-05-31T19:26:43,241 ******************************************************************************** 2024-05-31T19:26:43,241 ############################ 2024-05-31T19:26:43,242 # Package would be ignored # 2024-05-31T19:26:43,242 ############################ 2024-05-31T19:26:43,243 Python recognizes 'multiqc.modules.bustools' as an importable package[^1], 2024-05-31T19:26:43,243 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,244 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,245 package, please make sure that 'multiqc.modules.bustools' is explicitly added 2024-05-31T19:26:43,245 to the `packages` configuration field. 2024-05-31T19:26:43,246 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,246 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,247 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,248 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,249 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,250 If you don't want 'multiqc.modules.bustools' to be distributed and are 2024-05-31T19:26:43,250 already explicitly excluding 'multiqc.modules.bustools' via 2024-05-31T19:26:43,250 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,251 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,251 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,252 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,253 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,255 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,255 even if it does not contain any `.py` files. 2024-05-31T19:26:43,256 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,257 directory, all directories are treated like packages. 2024-05-31T19:26:43,257 ******************************************************************************** 2024-05-31T19:26:43,258 !! 2024-05-31T19:26:43,259 check.warn(importable) 2024-05-31T19:26:43,259 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ccs' is absent from the `packages` configuration. 2024-05-31T19:26:43,259 !! 2024-05-31T19:26:43,260 ******************************************************************************** 2024-05-31T19:26:43,260 ############################ 2024-05-31T19:26:43,261 # Package would be ignored # 2024-05-31T19:26:43,261 ############################ 2024-05-31T19:26:43,261 Python recognizes 'multiqc.modules.ccs' as an importable package[^1], 2024-05-31T19:26:43,262 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,263 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,263 package, please make sure that 'multiqc.modules.ccs' is explicitly added 2024-05-31T19:26:43,263 to the `packages` configuration field. 2024-05-31T19:26:43,264 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,265 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,265 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,266 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,267 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,268 If you don't want 'multiqc.modules.ccs' to be distributed and are 2024-05-31T19:26:43,269 already explicitly excluding 'multiqc.modules.ccs' via 2024-05-31T19:26:43,269 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,270 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,270 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,271 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,272 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,273 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,274 even if it does not contain any `.py` files. 2024-05-31T19:26:43,274 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,275 directory, all directories are treated like packages. 2024-05-31T19:26:43,275 ******************************************************************************** 2024-05-31T19:26:43,276 !! 2024-05-31T19:26:43,276 check.warn(importable) 2024-05-31T19:26:43,277 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.cellranger' is absent from the `packages` configuration. 2024-05-31T19:26:43,277 !! 2024-05-31T19:26:43,278 ******************************************************************************** 2024-05-31T19:26:43,278 ############################ 2024-05-31T19:26:43,279 # Package would be ignored # 2024-05-31T19:26:43,279 ############################ 2024-05-31T19:26:43,280 Python recognizes 'multiqc.modules.cellranger' as an importable package[^1], 2024-05-31T19:26:43,280 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,281 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,282 package, please make sure that 'multiqc.modules.cellranger' is explicitly added 2024-05-31T19:26:43,282 to the `packages` configuration field. 2024-05-31T19:26:43,283 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,284 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,284 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,285 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,285 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,286 If you don't want 'multiqc.modules.cellranger' to be distributed and are 2024-05-31T19:26:43,287 already explicitly excluding 'multiqc.modules.cellranger' via 2024-05-31T19:26:43,287 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,288 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,288 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,289 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,290 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,291 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,291 even if it does not contain any `.py` files. 2024-05-31T19:26:43,292 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,292 directory, all directories are treated like packages. 2024-05-31T19:26:43,293 ******************************************************************************** 2024-05-31T19:26:43,294 !! 2024-05-31T19:26:43,294 check.warn(importable) 2024-05-31T19:26:43,294 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.checkqc' is absent from the `packages` configuration. 2024-05-31T19:26:43,295 !! 2024-05-31T19:26:43,296 ******************************************************************************** 2024-05-31T19:26:43,296 ############################ 2024-05-31T19:26:43,296 # Package would be ignored # 2024-05-31T19:26:43,297 ############################ 2024-05-31T19:26:43,297 Python recognizes 'multiqc.modules.checkqc' as an importable package[^1], 2024-05-31T19:26:43,298 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,299 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,299 package, please make sure that 'multiqc.modules.checkqc' is explicitly added 2024-05-31T19:26:43,300 to the `packages` configuration field. 2024-05-31T19:26:43,301 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,301 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,302 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,303 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,304 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,305 If you don't want 'multiqc.modules.checkqc' to be distributed and are 2024-05-31T19:26:43,305 already explicitly excluding 'multiqc.modules.checkqc' via 2024-05-31T19:26:43,306 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,306 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,307 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,308 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,310 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,310 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,311 even if it does not contain any `.py` files. 2024-05-31T19:26:43,311 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,311 directory, all directories are treated like packages. 2024-05-31T19:26:43,312 ******************************************************************************** 2024-05-31T19:26:43,312 !! 2024-05-31T19:26:43,313 check.warn(importable) 2024-05-31T19:26:43,313 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.clipandmerge' is absent from the `packages` configuration. 2024-05-31T19:26:43,313 !! 2024-05-31T19:26:43,314 ******************************************************************************** 2024-05-31T19:26:43,315 ############################ 2024-05-31T19:26:43,315 # Package would be ignored # 2024-05-31T19:26:43,315 ############################ 2024-05-31T19:26:43,316 Python recognizes 'multiqc.modules.clipandmerge' as an importable package[^1], 2024-05-31T19:26:43,316 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,317 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,317 package, please make sure that 'multiqc.modules.clipandmerge' is explicitly added 2024-05-31T19:26:43,318 to the `packages` configuration field. 2024-05-31T19:26:43,319 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,319 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,320 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,321 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,322 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,323 If you don't want 'multiqc.modules.clipandmerge' to be distributed and are 2024-05-31T19:26:43,324 already explicitly excluding 'multiqc.modules.clipandmerge' via 2024-05-31T19:26:43,324 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,325 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,325 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,326 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,327 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,328 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,329 even if it does not contain any `.py` files. 2024-05-31T19:26:43,329 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,330 directory, all directories are treated like packages. 2024-05-31T19:26:43,330 ******************************************************************************** 2024-05-31T19:26:43,331 !! 2024-05-31T19:26:43,332 check.warn(importable) 2024-05-31T19:26:43,332 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.clusterflow' is absent from the `packages` configuration. 2024-05-31T19:26:43,332 !! 2024-05-31T19:26:43,333 ******************************************************************************** 2024-05-31T19:26:43,334 ############################ 2024-05-31T19:26:43,335 # Package would be ignored # 2024-05-31T19:26:43,335 ############################ 2024-05-31T19:26:43,336 Python recognizes 'multiqc.modules.clusterflow' as an importable package[^1], 2024-05-31T19:26:43,336 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,337 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,337 package, please make sure that 'multiqc.modules.clusterflow' is explicitly added 2024-05-31T19:26:43,337 to the `packages` configuration field. 2024-05-31T19:26:43,338 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,338 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,339 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,339 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,340 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,341 If you don't want 'multiqc.modules.clusterflow' to be distributed and are 2024-05-31T19:26:43,341 already explicitly excluding 'multiqc.modules.clusterflow' via 2024-05-31T19:26:43,341 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,342 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,342 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,343 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,344 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,345 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,346 even if it does not contain any `.py` files. 2024-05-31T19:26:43,346 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,347 directory, all directories are treated like packages. 2024-05-31T19:26:43,347 ******************************************************************************** 2024-05-31T19:26:43,348 !! 2024-05-31T19:26:43,349 check.warn(importable) 2024-05-31T19:26:43,349 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.conpair' is absent from the `packages` configuration. 2024-05-31T19:26:43,350 !! 2024-05-31T19:26:43,351 ******************************************************************************** 2024-05-31T19:26:43,351 ############################ 2024-05-31T19:26:43,352 # Package would be ignored # 2024-05-31T19:26:43,352 ############################ 2024-05-31T19:26:43,353 Python recognizes 'multiqc.modules.conpair' as an importable package[^1], 2024-05-31T19:26:43,353 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,354 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,355 package, please make sure that 'multiqc.modules.conpair' is explicitly added 2024-05-31T19:26:43,355 to the `packages` configuration field. 2024-05-31T19:26:43,356 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,357 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,357 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,358 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,359 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,360 If you don't want 'multiqc.modules.conpair' to be distributed and are 2024-05-31T19:26:43,360 already explicitly excluding 'multiqc.modules.conpair' via 2024-05-31T19:26:43,361 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,361 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,362 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,362 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,363 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,364 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,365 even if it does not contain any `.py` files. 2024-05-31T19:26:43,365 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,365 directory, all directories are treated like packages. 2024-05-31T19:26:43,366 ******************************************************************************** 2024-05-31T19:26:43,366 !! 2024-05-31T19:26:43,367 check.warn(importable) 2024-05-31T19:26:43,367 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.custom_content' is absent from the `packages` configuration. 2024-05-31T19:26:43,368 !! 2024-05-31T19:26:43,368 ******************************************************************************** 2024-05-31T19:26:43,369 ############################ 2024-05-31T19:26:43,369 # Package would be ignored # 2024-05-31T19:26:43,370 ############################ 2024-05-31T19:26:43,370 Python recognizes 'multiqc.modules.custom_content' as an importable package[^1], 2024-05-31T19:26:43,371 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,372 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,372 package, please make sure that 'multiqc.modules.custom_content' is explicitly added 2024-05-31T19:26:43,373 to the `packages` configuration field. 2024-05-31T19:26:43,374 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,374 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,375 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,376 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,377 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,378 If you don't want 'multiqc.modules.custom_content' to be distributed and are 2024-05-31T19:26:43,378 already explicitly excluding 'multiqc.modules.custom_content' via 2024-05-31T19:26:43,379 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,379 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,379 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,380 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,381 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,383 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,383 even if it does not contain any `.py` files. 2024-05-31T19:26:43,384 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,384 directory, all directories are treated like packages. 2024-05-31T19:26:43,384 ******************************************************************************** 2024-05-31T19:26:43,385 !! 2024-05-31T19:26:43,386 check.warn(importable) 2024-05-31T19:26:43,387 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.cutadapt' is absent from the `packages` configuration. 2024-05-31T19:26:43,388 !! 2024-05-31T19:26:43,388 ******************************************************************************** 2024-05-31T19:26:43,389 ############################ 2024-05-31T19:26:43,389 # Package would be ignored # 2024-05-31T19:26:43,389 ############################ 2024-05-31T19:26:43,390 Python recognizes 'multiqc.modules.cutadapt' as an importable package[^1], 2024-05-31T19:26:43,390 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,391 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,391 package, please make sure that 'multiqc.modules.cutadapt' is explicitly added 2024-05-31T19:26:43,392 to the `packages` configuration field. 2024-05-31T19:26:43,392 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,393 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,393 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,394 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,395 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,395 If you don't want 'multiqc.modules.cutadapt' to be distributed and are 2024-05-31T19:26:43,396 already explicitly excluding 'multiqc.modules.cutadapt' via 2024-05-31T19:26:43,396 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,397 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,397 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,398 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,399 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,400 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,401 even if it does not contain any `.py` files. 2024-05-31T19:26:43,401 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,402 directory, all directories are treated like packages. 2024-05-31T19:26:43,402 ******************************************************************************** 2024-05-31T19:26:43,403 !! 2024-05-31T19:26:43,404 check.warn(importable) 2024-05-31T19:26:43,404 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.damageprofiler' is absent from the `packages` configuration. 2024-05-31T19:26:43,405 !! 2024-05-31T19:26:43,406 ******************************************************************************** 2024-05-31T19:26:43,406 ############################ 2024-05-31T19:26:43,407 # Package would be ignored # 2024-05-31T19:26:43,407 ############################ 2024-05-31T19:26:43,408 Python recognizes 'multiqc.modules.damageprofiler' as an importable package[^1], 2024-05-31T19:26:43,408 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,409 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,409 package, please make sure that 'multiqc.modules.damageprofiler' is explicitly added 2024-05-31T19:26:43,410 to the `packages` configuration field. 2024-05-31T19:26:43,411 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,411 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,412 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,413 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,413 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,414 If you don't want 'multiqc.modules.damageprofiler' to be distributed and are 2024-05-31T19:26:43,414 already explicitly excluding 'multiqc.modules.damageprofiler' via 2024-05-31T19:26:43,415 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,415 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,415 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,416 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,417 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,418 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,419 even if it does not contain any `.py` files. 2024-05-31T19:26:43,419 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,419 directory, all directories are treated like packages. 2024-05-31T19:26:43,420 ******************************************************************************** 2024-05-31T19:26:43,421 !! 2024-05-31T19:26:43,421 check.warn(importable) 2024-05-31T19:26:43,422 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dedup' is absent from the `packages` configuration. 2024-05-31T19:26:43,422 !! 2024-05-31T19:26:43,423 ******************************************************************************** 2024-05-31T19:26:43,423 ############################ 2024-05-31T19:26:43,424 # Package would be ignored # 2024-05-31T19:26:43,424 ############################ 2024-05-31T19:26:43,425 Python recognizes 'multiqc.modules.dedup' as an importable package[^1], 2024-05-31T19:26:43,425 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,426 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,427 package, please make sure that 'multiqc.modules.dedup' is explicitly added 2024-05-31T19:26:43,427 to the `packages` configuration field. 2024-05-31T19:26:43,428 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,428 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,429 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,430 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,431 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,431 If you don't want 'multiqc.modules.dedup' to be distributed and are 2024-05-31T19:26:43,432 already explicitly excluding 'multiqc.modules.dedup' via 2024-05-31T19:26:43,432 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,433 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,433 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,434 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,435 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,437 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,437 even if it does not contain any `.py` files. 2024-05-31T19:26:43,438 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,438 directory, all directories are treated like packages. 2024-05-31T19:26:43,439 ******************************************************************************** 2024-05-31T19:26:43,439 !! 2024-05-31T19:26:43,440 check.warn(importable) 2024-05-31T19:26:43,440 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.deeptools' is absent from the `packages` configuration. 2024-05-31T19:26:43,440 !! 2024-05-31T19:26:43,441 ******************************************************************************** 2024-05-31T19:26:43,442 ############################ 2024-05-31T19:26:43,442 # Package would be ignored # 2024-05-31T19:26:43,443 ############################ 2024-05-31T19:26:43,443 Python recognizes 'multiqc.modules.deeptools' as an importable package[^1], 2024-05-31T19:26:43,444 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,444 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,445 package, please make sure that 'multiqc.modules.deeptools' is explicitly added 2024-05-31T19:26:43,445 to the `packages` configuration field. 2024-05-31T19:26:43,446 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,446 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,447 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,448 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,449 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,450 If you don't want 'multiqc.modules.deeptools' to be distributed and are 2024-05-31T19:26:43,450 already explicitly excluding 'multiqc.modules.deeptools' via 2024-05-31T19:26:43,451 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,451 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,451 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,452 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,453 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,455 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,455 even if it does not contain any `.py` files. 2024-05-31T19:26:43,456 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,456 directory, all directories are treated like packages. 2024-05-31T19:26:43,456 ******************************************************************************** 2024-05-31T19:26:43,457 !! 2024-05-31T19:26:43,458 check.warn(importable) 2024-05-31T19:26:43,458 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.diamond' is absent from the `packages` configuration. 2024-05-31T19:26:43,459 !! 2024-05-31T19:26:43,460 ******************************************************************************** 2024-05-31T19:26:43,460 ############################ 2024-05-31T19:26:43,461 # Package would be ignored # 2024-05-31T19:26:43,461 ############################ 2024-05-31T19:26:43,462 Python recognizes 'multiqc.modules.diamond' as an importable package[^1], 2024-05-31T19:26:43,462 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,463 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,464 package, please make sure that 'multiqc.modules.diamond' is explicitly added 2024-05-31T19:26:43,464 to the `packages` configuration field. 2024-05-31T19:26:43,465 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,465 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,466 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,466 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,467 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,468 If you don't want 'multiqc.modules.diamond' to be distributed and are 2024-05-31T19:26:43,468 already explicitly excluding 'multiqc.modules.diamond' via 2024-05-31T19:26:43,469 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,469 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,470 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,470 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,471 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,472 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,473 even if it does not contain any `.py` files. 2024-05-31T19:26:43,473 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,474 directory, all directories are treated like packages. 2024-05-31T19:26:43,474 ******************************************************************************** 2024-05-31T19:26:43,475 !! 2024-05-31T19:26:43,476 check.warn(importable) 2024-05-31T19:26:43,476 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.disambiguate' is absent from the `packages` configuration. 2024-05-31T19:26:43,476 !! 2024-05-31T19:26:43,477 ******************************************************************************** 2024-05-31T19:26:43,478 ############################ 2024-05-31T19:26:43,478 # Package would be ignored # 2024-05-31T19:26:43,479 ############################ 2024-05-31T19:26:43,479 Python recognizes 'multiqc.modules.disambiguate' as an importable package[^1], 2024-05-31T19:26:43,480 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,481 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,481 package, please make sure that 'multiqc.modules.disambiguate' is explicitly added 2024-05-31T19:26:43,482 to the `packages` configuration field. 2024-05-31T19:26:43,483 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,483 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,484 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,485 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,486 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,487 If you don't want 'multiqc.modules.disambiguate' to be distributed and are 2024-05-31T19:26:43,487 already explicitly excluding 'multiqc.modules.disambiguate' via 2024-05-31T19:26:43,488 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,488 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,489 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,490 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,490 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,491 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,492 even if it does not contain any `.py` files. 2024-05-31T19:26:43,492 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,492 directory, all directories are treated like packages. 2024-05-31T19:26:43,493 ******************************************************************************** 2024-05-31T19:26:43,494 !! 2024-05-31T19:26:43,494 check.warn(importable) 2024-05-31T19:26:43,494 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen' is absent from the `packages` configuration. 2024-05-31T19:26:43,495 !! 2024-05-31T19:26:43,496 ******************************************************************************** 2024-05-31T19:26:43,496 ############################ 2024-05-31T19:26:43,496 # Package would be ignored # 2024-05-31T19:26:43,497 ############################ 2024-05-31T19:26:43,497 Python recognizes 'multiqc.modules.dragen' as an importable package[^1], 2024-05-31T19:26:43,498 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,498 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,499 package, please make sure that 'multiqc.modules.dragen' is explicitly added 2024-05-31T19:26:43,499 to the `packages` configuration field. 2024-05-31T19:26:43,500 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,501 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,501 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,502 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,503 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,504 If you don't want 'multiqc.modules.dragen' to be distributed and are 2024-05-31T19:26:43,504 already explicitly excluding 'multiqc.modules.dragen' via 2024-05-31T19:26:43,505 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,505 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,506 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,507 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,507 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,509 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,509 even if it does not contain any `.py` files. 2024-05-31T19:26:43,510 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,510 directory, all directories are treated like packages. 2024-05-31T19:26:43,511 ******************************************************************************** 2024-05-31T19:26:43,512 !! 2024-05-31T19:26:43,512 check.warn(importable) 2024-05-31T19:26:43,513 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen_fastqc' is absent from the `packages` configuration. 2024-05-31T19:26:43,514 !! 2024-05-31T19:26:43,515 ******************************************************************************** 2024-05-31T19:26:43,515 ############################ 2024-05-31T19:26:43,515 # Package would be ignored # 2024-05-31T19:26:43,516 ############################ 2024-05-31T19:26:43,516 Python recognizes 'multiqc.modules.dragen_fastqc' as an importable package[^1], 2024-05-31T19:26:43,516 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,517 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,518 package, please make sure that 'multiqc.modules.dragen_fastqc' is explicitly added 2024-05-31T19:26:43,518 to the `packages` configuration field. 2024-05-31T19:26:43,519 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,519 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,519 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,520 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,521 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,522 If you don't want 'multiqc.modules.dragen_fastqc' to be distributed and are 2024-05-31T19:26:43,522 already explicitly excluding 'multiqc.modules.dragen_fastqc' via 2024-05-31T19:26:43,523 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,523 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,524 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,525 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,526 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,527 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,527 even if it does not contain any `.py` files. 2024-05-31T19:26:43,528 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,528 directory, all directories are treated like packages. 2024-05-31T19:26:43,529 ******************************************************************************** 2024-05-31T19:26:43,530 !! 2024-05-31T19:26:43,530 check.warn(importable) 2024-05-31T19:26:43,530 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.dragen_fastqc.assets.js' is absent from the `packages` configuration. 2024-05-31T19:26:43,531 !! 2024-05-31T19:26:43,532 ******************************************************************************** 2024-05-31T19:26:43,532 ############################ 2024-05-31T19:26:43,533 # Package would be ignored # 2024-05-31T19:26:43,533 ############################ 2024-05-31T19:26:43,534 Python recognizes 'multiqc.modules.dragen_fastqc.assets.js' as an importable package[^1], 2024-05-31T19:26:43,535 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,535 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,536 package, please make sure that 'multiqc.modules.dragen_fastqc.assets.js' is explicitly added 2024-05-31T19:26:43,537 to the `packages` configuration field. 2024-05-31T19:26:43,538 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,538 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,539 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,540 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,541 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,541 If you don't want 'multiqc.modules.dragen_fastqc.assets.js' to be distributed and are 2024-05-31T19:26:43,542 already explicitly excluding 'multiqc.modules.dragen_fastqc.assets.js' via 2024-05-31T19:26:43,542 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,542 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,543 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,544 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,544 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,546 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,546 even if it does not contain any `.py` files. 2024-05-31T19:26:43,547 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,547 directory, all directories are treated like packages. 2024-05-31T19:26:43,547 ******************************************************************************** 2024-05-31T19:26:43,548 !! 2024-05-31T19:26:43,549 check.warn(importable) 2024-05-31T19:26:43,549 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.eigenstratdatabasetools' is absent from the `packages` configuration. 2024-05-31T19:26:43,549 !! 2024-05-31T19:26:43,550 ******************************************************************************** 2024-05-31T19:26:43,551 ############################ 2024-05-31T19:26:43,551 # Package would be ignored # 2024-05-31T19:26:43,552 ############################ 2024-05-31T19:26:43,552 Python recognizes 'multiqc.modules.eigenstratdatabasetools' as an importable package[^1], 2024-05-31T19:26:43,552 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,553 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,554 package, please make sure that 'multiqc.modules.eigenstratdatabasetools' is explicitly added 2024-05-31T19:26:43,554 to the `packages` configuration field. 2024-05-31T19:26:43,555 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,555 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,556 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,557 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,558 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,558 If you don't want 'multiqc.modules.eigenstratdatabasetools' to be distributed and are 2024-05-31T19:26:43,559 already explicitly excluding 'multiqc.modules.eigenstratdatabasetools' via 2024-05-31T19:26:43,559 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,560 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,560 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,561 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,562 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,563 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,564 even if it does not contain any `.py` files. 2024-05-31T19:26:43,565 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,565 directory, all directories are treated like packages. 2024-05-31T19:26:43,566 ******************************************************************************** 2024-05-31T19:26:43,566 !! 2024-05-31T19:26:43,567 check.warn(importable) 2024-05-31T19:26:43,567 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastp' is absent from the `packages` configuration. 2024-05-31T19:26:43,567 !! 2024-05-31T19:26:43,568 ******************************************************************************** 2024-05-31T19:26:43,568 ############################ 2024-05-31T19:26:43,569 # Package would be ignored # 2024-05-31T19:26:43,569 ############################ 2024-05-31T19:26:43,569 Python recognizes 'multiqc.modules.fastp' as an importable package[^1], 2024-05-31T19:26:43,570 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,571 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,571 package, please make sure that 'multiqc.modules.fastp' is explicitly added 2024-05-31T19:26:43,571 to the `packages` configuration field. 2024-05-31T19:26:43,572 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,573 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,573 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,574 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,575 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,575 If you don't want 'multiqc.modules.fastp' to be distributed and are 2024-05-31T19:26:43,576 already explicitly excluding 'multiqc.modules.fastp' via 2024-05-31T19:26:43,576 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,577 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,577 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,578 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,579 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,581 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,581 even if it does not contain any `.py` files. 2024-05-31T19:26:43,581 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,582 directory, all directories are treated like packages. 2024-05-31T19:26:43,582 ******************************************************************************** 2024-05-31T19:26:43,583 !! 2024-05-31T19:26:43,584 check.warn(importable) 2024-05-31T19:26:43,584 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastq_screen' is absent from the `packages` configuration. 2024-05-31T19:26:43,585 !! 2024-05-31T19:26:43,586 ******************************************************************************** 2024-05-31T19:26:43,586 ############################ 2024-05-31T19:26:43,586 # Package would be ignored # 2024-05-31T19:26:43,587 ############################ 2024-05-31T19:26:43,587 Python recognizes 'multiqc.modules.fastq_screen' as an importable package[^1], 2024-05-31T19:26:43,588 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,589 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,589 package, please make sure that 'multiqc.modules.fastq_screen' is explicitly added 2024-05-31T19:26:43,590 to the `packages` configuration field. 2024-05-31T19:26:43,591 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,591 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,591 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,592 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,593 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,594 If you don't want 'multiqc.modules.fastq_screen' to be distributed and are 2024-05-31T19:26:43,594 already explicitly excluding 'multiqc.modules.fastq_screen' via 2024-05-31T19:26:43,594 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,595 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,595 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,596 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,597 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,598 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,598 even if it does not contain any `.py` files. 2024-05-31T19:26:43,599 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,599 directory, all directories are treated like packages. 2024-05-31T19:26:43,600 ******************************************************************************** 2024-05-31T19:26:43,600 !! 2024-05-31T19:26:43,601 check.warn(importable) 2024-05-31T19:26:43,601 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc' is absent from the `packages` configuration. 2024-05-31T19:26:43,602 !! 2024-05-31T19:26:43,602 ******************************************************************************** 2024-05-31T19:26:43,603 ############################ 2024-05-31T19:26:43,603 # Package would be ignored # 2024-05-31T19:26:43,604 ############################ 2024-05-31T19:26:43,604 Python recognizes 'multiqc.modules.fastqc' as an importable package[^1], 2024-05-31T19:26:43,605 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,606 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,606 package, please make sure that 'multiqc.modules.fastqc' is explicitly added 2024-05-31T19:26:43,607 to the `packages` configuration field. 2024-05-31T19:26:43,607 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,608 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,608 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,609 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,610 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,611 If you don't want 'multiqc.modules.fastqc' to be distributed and are 2024-05-31T19:26:43,612 already explicitly excluding 'multiqc.modules.fastqc' via 2024-05-31T19:26:43,612 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,613 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,613 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,614 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,615 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,616 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,616 even if it does not contain any `.py` files. 2024-05-31T19:26:43,616 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,617 directory, all directories are treated like packages. 2024-05-31T19:26:43,617 ******************************************************************************** 2024-05-31T19:26:43,618 !! 2024-05-31T19:26:43,618 check.warn(importable) 2024-05-31T19:26:43,619 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.assets.css' is absent from the `packages` configuration. 2024-05-31T19:26:43,619 !! 2024-05-31T19:26:43,620 ******************************************************************************** 2024-05-31T19:26:43,620 ############################ 2024-05-31T19:26:43,620 # Package would be ignored # 2024-05-31T19:26:43,621 ############################ 2024-05-31T19:26:43,621 Python recognizes 'multiqc.modules.fastqc.assets.css' as an importable package[^1], 2024-05-31T19:26:43,622 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,622 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,623 package, please make sure that 'multiqc.modules.fastqc.assets.css' is explicitly added 2024-05-31T19:26:43,623 to the `packages` configuration field. 2024-05-31T19:26:43,625 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,625 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,626 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,626 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,627 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,628 If you don't want 'multiqc.modules.fastqc.assets.css' to be distributed and are 2024-05-31T19:26:43,628 already explicitly excluding 'multiqc.modules.fastqc.assets.css' via 2024-05-31T19:26:43,629 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,629 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,630 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,631 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,632 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,633 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,634 even if it does not contain any `.py` files. 2024-05-31T19:26:43,634 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,635 directory, all directories are treated like packages. 2024-05-31T19:26:43,635 ******************************************************************************** 2024-05-31T19:26:43,636 !! 2024-05-31T19:26:43,636 check.warn(importable) 2024-05-31T19:26:43,637 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.assets.js' is absent from the `packages` configuration. 2024-05-31T19:26:43,637 !! 2024-05-31T19:26:43,638 ******************************************************************************** 2024-05-31T19:26:43,639 ############################ 2024-05-31T19:26:43,639 # Package would be ignored # 2024-05-31T19:26:43,639 ############################ 2024-05-31T19:26:43,639 Python recognizes 'multiqc.modules.fastqc.assets.js' as an importable package[^1], 2024-05-31T19:26:43,640 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,641 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,641 package, please make sure that 'multiqc.modules.fastqc.assets.js' is explicitly added 2024-05-31T19:26:43,641 to the `packages` configuration field. 2024-05-31T19:26:43,642 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,643 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,643 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,644 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,644 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,646 If you don't want 'multiqc.modules.fastqc.assets.js' to be distributed and are 2024-05-31T19:26:43,646 already explicitly excluding 'multiqc.modules.fastqc.assets.js' via 2024-05-31T19:26:43,647 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,647 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,648 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,648 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,649 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,651 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,651 even if it does not contain any `.py` files. 2024-05-31T19:26:43,652 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,652 directory, all directories are treated like packages. 2024-05-31T19:26:43,653 ******************************************************************************** 2024-05-31T19:26:43,654 !! 2024-05-31T19:26:43,654 check.warn(importable) 2024-05-31T19:26:43,655 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fastqc.fastqc_theoretical_gc' is absent from the `packages` configuration. 2024-05-31T19:26:43,655 !! 2024-05-31T19:26:43,656 ******************************************************************************** 2024-05-31T19:26:43,657 ############################ 2024-05-31T19:26:43,657 # Package would be ignored # 2024-05-31T19:26:43,658 ############################ 2024-05-31T19:26:43,658 Python recognizes 'multiqc.modules.fastqc.fastqc_theoretical_gc' as an importable package[^1], 2024-05-31T19:26:43,658 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,659 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,660 package, please make sure that 'multiqc.modules.fastqc.fastqc_theoretical_gc' is explicitly added 2024-05-31T19:26:43,660 to the `packages` configuration field. 2024-05-31T19:26:43,661 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,662 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,662 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,663 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,664 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,665 If you don't want 'multiqc.modules.fastqc.fastqc_theoretical_gc' to be distributed and are 2024-05-31T19:26:43,665 already explicitly excluding 'multiqc.modules.fastqc.fastqc_theoretical_gc' via 2024-05-31T19:26:43,665 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,666 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,666 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,667 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,668 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,669 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,669 even if it does not contain any `.py` files. 2024-05-31T19:26:43,669 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,670 directory, all directories are treated like packages. 2024-05-31T19:26:43,670 ******************************************************************************** 2024-05-31T19:26:43,671 !! 2024-05-31T19:26:43,671 check.warn(importable) 2024-05-31T19:26:43,672 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.featureCounts' is absent from the `packages` configuration. 2024-05-31T19:26:43,672 !! 2024-05-31T19:26:43,673 ******************************************************************************** 2024-05-31T19:26:43,673 ############################ 2024-05-31T19:26:43,674 # Package would be ignored # 2024-05-31T19:26:43,674 ############################ 2024-05-31T19:26:43,675 Python recognizes 'multiqc.modules.featureCounts' as an importable package[^1], 2024-05-31T19:26:43,675 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,676 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,676 package, please make sure that 'multiqc.modules.featureCounts' is explicitly added 2024-05-31T19:26:43,677 to the `packages` configuration field. 2024-05-31T19:26:43,678 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,678 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,678 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,679 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,680 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,681 If you don't want 'multiqc.modules.featureCounts' to be distributed and are 2024-05-31T19:26:43,682 already explicitly excluding 'multiqc.modules.featureCounts' via 2024-05-31T19:26:43,682 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,683 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,683 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,684 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,685 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,686 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,686 even if it does not contain any `.py` files. 2024-05-31T19:26:43,687 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,687 directory, all directories are treated like packages. 2024-05-31T19:26:43,688 ******************************************************************************** 2024-05-31T19:26:43,689 !! 2024-05-31T19:26:43,689 check.warn(importable) 2024-05-31T19:26:43,689 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.fgbio' is absent from the `packages` configuration. 2024-05-31T19:26:43,690 !! 2024-05-31T19:26:43,690 ******************************************************************************** 2024-05-31T19:26:43,691 ############################ 2024-05-31T19:26:43,691 # Package would be ignored # 2024-05-31T19:26:43,691 ############################ 2024-05-31T19:26:43,692 Python recognizes 'multiqc.modules.fgbio' as an importable package[^1], 2024-05-31T19:26:43,692 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,693 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,694 package, please make sure that 'multiqc.modules.fgbio' is explicitly added 2024-05-31T19:26:43,694 to the `packages` configuration field. 2024-05-31T19:26:43,695 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,695 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,696 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,696 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,697 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,698 If you don't want 'multiqc.modules.fgbio' to be distributed and are 2024-05-31T19:26:43,698 already explicitly excluding 'multiqc.modules.fgbio' via 2024-05-31T19:26:43,699 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,699 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,699 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,700 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,701 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,702 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,703 even if it does not contain any `.py` files. 2024-05-31T19:26:43,703 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,704 directory, all directories are treated like packages. 2024-05-31T19:26:43,704 ******************************************************************************** 2024-05-31T19:26:43,705 !! 2024-05-31T19:26:43,706 check.warn(importable) 2024-05-31T19:26:43,706 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.filtlong' is absent from the `packages` configuration. 2024-05-31T19:26:43,706 !! 2024-05-31T19:26:43,707 ******************************************************************************** 2024-05-31T19:26:43,708 ############################ 2024-05-31T19:26:43,708 # Package would be ignored # 2024-05-31T19:26:43,709 ############################ 2024-05-31T19:26:43,709 Python recognizes 'multiqc.modules.filtlong' as an importable package[^1], 2024-05-31T19:26:43,710 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,711 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,711 package, please make sure that 'multiqc.modules.filtlong' is explicitly added 2024-05-31T19:26:43,712 to the `packages` configuration field. 2024-05-31T19:26:43,713 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,714 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,714 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,715 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,716 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,716 If you don't want 'multiqc.modules.filtlong' to be distributed and are 2024-05-31T19:26:43,717 already explicitly excluding 'multiqc.modules.filtlong' via 2024-05-31T19:26:43,717 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,718 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,718 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,719 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,719 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,721 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,721 even if it does not contain any `.py` files. 2024-05-31T19:26:43,722 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,722 directory, all directories are treated like packages. 2024-05-31T19:26:43,722 ******************************************************************************** 2024-05-31T19:26:43,723 !! 2024-05-31T19:26:43,724 check.warn(importable) 2024-05-31T19:26:43,724 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.flash' is absent from the `packages` configuration. 2024-05-31T19:26:43,725 !! 2024-05-31T19:26:43,726 ******************************************************************************** 2024-05-31T19:26:43,726 ############################ 2024-05-31T19:26:43,727 # Package would be ignored # 2024-05-31T19:26:43,727 ############################ 2024-05-31T19:26:43,728 Python recognizes 'multiqc.modules.flash' as an importable package[^1], 2024-05-31T19:26:43,728 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,729 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,729 package, please make sure that 'multiqc.modules.flash' is explicitly added 2024-05-31T19:26:43,730 to the `packages` configuration field. 2024-05-31T19:26:43,731 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,731 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,731 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,732 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,733 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,734 If you don't want 'multiqc.modules.flash' to be distributed and are 2024-05-31T19:26:43,735 already explicitly excluding 'multiqc.modules.flash' via 2024-05-31T19:26:43,735 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,736 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,736 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,737 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,738 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,739 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,739 even if it does not contain any `.py` files. 2024-05-31T19:26:43,740 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,740 directory, all directories are treated like packages. 2024-05-31T19:26:43,740 ******************************************************************************** 2024-05-31T19:26:43,741 !! 2024-05-31T19:26:43,741 check.warn(importable) 2024-05-31T19:26:43,742 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.flexbar' is absent from the `packages` configuration. 2024-05-31T19:26:43,742 !! 2024-05-31T19:26:43,743 ******************************************************************************** 2024-05-31T19:26:43,743 ############################ 2024-05-31T19:26:43,744 # Package would be ignored # 2024-05-31T19:26:43,744 ############################ 2024-05-31T19:26:43,744 Python recognizes 'multiqc.modules.flexbar' as an importable package[^1], 2024-05-31T19:26:43,745 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,746 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,746 package, please make sure that 'multiqc.modules.flexbar' is explicitly added 2024-05-31T19:26:43,746 to the `packages` configuration field. 2024-05-31T19:26:43,747 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,748 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,748 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,749 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,750 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,751 If you don't want 'multiqc.modules.flexbar' to be distributed and are 2024-05-31T19:26:43,752 already explicitly excluding 'multiqc.modules.flexbar' via 2024-05-31T19:26:43,752 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,753 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,753 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,754 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,755 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,756 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,757 even if it does not contain any `.py` files. 2024-05-31T19:26:43,757 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,758 directory, all directories are treated like packages. 2024-05-31T19:26:43,758 ******************************************************************************** 2024-05-31T19:26:43,759 !! 2024-05-31T19:26:43,759 check.warn(importable) 2024-05-31T19:26:43,760 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.freyja' is absent from the `packages` configuration. 2024-05-31T19:26:43,760 !! 2024-05-31T19:26:43,761 ******************************************************************************** 2024-05-31T19:26:43,761 ############################ 2024-05-31T19:26:43,762 # Package would be ignored # 2024-05-31T19:26:43,763 ############################ 2024-05-31T19:26:43,763 Python recognizes 'multiqc.modules.freyja' as an importable package[^1], 2024-05-31T19:26:43,763 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,764 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,764 package, please make sure that 'multiqc.modules.freyja' is explicitly added 2024-05-31T19:26:43,765 to the `packages` configuration field. 2024-05-31T19:26:43,765 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,766 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,766 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,767 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,767 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,768 If you don't want 'multiqc.modules.freyja' to be distributed and are 2024-05-31T19:26:43,768 already explicitly excluding 'multiqc.modules.freyja' via 2024-05-31T19:26:43,769 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,769 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,770 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,770 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,771 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,773 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,773 even if it does not contain any `.py` files. 2024-05-31T19:26:43,774 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,774 directory, all directories are treated like packages. 2024-05-31T19:26:43,774 ******************************************************************************** 2024-05-31T19:26:43,775 !! 2024-05-31T19:26:43,776 check.warn(importable) 2024-05-31T19:26:43,776 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gatk' is absent from the `packages` configuration. 2024-05-31T19:26:43,776 !! 2024-05-31T19:26:43,778 ******************************************************************************** 2024-05-31T19:26:43,778 ############################ 2024-05-31T19:26:43,779 # Package would be ignored # 2024-05-31T19:26:43,779 ############################ 2024-05-31T19:26:43,779 Python recognizes 'multiqc.modules.gatk' as an importable package[^1], 2024-05-31T19:26:43,780 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,781 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,781 package, please make sure that 'multiqc.modules.gatk' is explicitly added 2024-05-31T19:26:43,782 to the `packages` configuration field. 2024-05-31T19:26:43,783 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,783 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,784 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,785 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,786 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,787 If you don't want 'multiqc.modules.gatk' to be distributed and are 2024-05-31T19:26:43,787 already explicitly excluding 'multiqc.modules.gatk' via 2024-05-31T19:26:43,788 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,788 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,789 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,789 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,790 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,791 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,791 even if it does not contain any `.py` files. 2024-05-31T19:26:43,792 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,792 directory, all directories are treated like packages. 2024-05-31T19:26:43,792 ******************************************************************************** 2024-05-31T19:26:43,793 !! 2024-05-31T19:26:43,793 check.warn(importable) 2024-05-31T19:26:43,794 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gffcompare' is absent from the `packages` configuration. 2024-05-31T19:26:43,794 !! 2024-05-31T19:26:43,795 ******************************************************************************** 2024-05-31T19:26:43,795 ############################ 2024-05-31T19:26:43,796 # Package would be ignored # 2024-05-31T19:26:43,796 ############################ 2024-05-31T19:26:43,796 Python recognizes 'multiqc.modules.gffcompare' as an importable package[^1], 2024-05-31T19:26:43,797 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,798 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,798 package, please make sure that 'multiqc.modules.gffcompare' is explicitly added 2024-05-31T19:26:43,798 to the `packages` configuration field. 2024-05-31T19:26:43,799 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,800 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,800 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,802 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,803 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,804 If you don't want 'multiqc.modules.gffcompare' to be distributed and are 2024-05-31T19:26:43,804 already explicitly excluding 'multiqc.modules.gffcompare' via 2024-05-31T19:26:43,805 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,805 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,806 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,806 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,807 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,809 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,809 even if it does not contain any `.py` files. 2024-05-31T19:26:43,810 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,810 directory, all directories are treated like packages. 2024-05-31T19:26:43,811 ******************************************************************************** 2024-05-31T19:26:43,812 !! 2024-05-31T19:26:43,812 check.warn(importable) 2024-05-31T19:26:43,813 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.goleft_indexcov' is absent from the `packages` configuration. 2024-05-31T19:26:43,813 !! 2024-05-31T19:26:43,814 ******************************************************************************** 2024-05-31T19:26:43,815 ############################ 2024-05-31T19:26:43,815 # Package would be ignored # 2024-05-31T19:26:43,815 ############################ 2024-05-31T19:26:43,816 Python recognizes 'multiqc.modules.goleft_indexcov' as an importable package[^1], 2024-05-31T19:26:43,816 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,817 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,817 package, please make sure that 'multiqc.modules.goleft_indexcov' is explicitly added 2024-05-31T19:26:43,817 to the `packages` configuration field. 2024-05-31T19:26:43,818 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,818 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,819 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,819 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,820 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,821 If you don't want 'multiqc.modules.goleft_indexcov' to be distributed and are 2024-05-31T19:26:43,822 already explicitly excluding 'multiqc.modules.goleft_indexcov' via 2024-05-31T19:26:43,822 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,822 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,823 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,824 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,825 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,826 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,827 even if it does not contain any `.py` files. 2024-05-31T19:26:43,827 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,828 directory, all directories are treated like packages. 2024-05-31T19:26:43,828 ******************************************************************************** 2024-05-31T19:26:43,829 !! 2024-05-31T19:26:43,829 check.warn(importable) 2024-05-31T19:26:43,830 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.gopeaks' is absent from the `packages` configuration. 2024-05-31T19:26:43,830 !! 2024-05-31T19:26:43,831 ******************************************************************************** 2024-05-31T19:26:43,832 ############################ 2024-05-31T19:26:43,832 # Package would be ignored # 2024-05-31T19:26:43,832 ############################ 2024-05-31T19:26:43,833 Python recognizes 'multiqc.modules.gopeaks' as an importable package[^1], 2024-05-31T19:26:43,833 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,834 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,835 package, please make sure that 'multiqc.modules.gopeaks' is explicitly added 2024-05-31T19:26:43,835 to the `packages` configuration field. 2024-05-31T19:26:43,836 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,837 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,837 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,838 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,839 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,839 If you don't want 'multiqc.modules.gopeaks' to be distributed and are 2024-05-31T19:26:43,840 already explicitly excluding 'multiqc.modules.gopeaks' via 2024-05-31T19:26:43,840 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,840 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,841 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,841 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,842 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,843 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,844 even if it does not contain any `.py` files. 2024-05-31T19:26:43,844 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,844 directory, all directories are treated like packages. 2024-05-31T19:26:43,845 ******************************************************************************** 2024-05-31T19:26:43,846 !! 2024-05-31T19:26:43,846 check.warn(importable) 2024-05-31T19:26:43,847 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.happy' is absent from the `packages` configuration. 2024-05-31T19:26:43,847 !! 2024-05-31T19:26:43,848 ******************************************************************************** 2024-05-31T19:26:43,848 ############################ 2024-05-31T19:26:43,849 # Package would be ignored # 2024-05-31T19:26:43,849 ############################ 2024-05-31T19:26:43,850 Python recognizes 'multiqc.modules.happy' as an importable package[^1], 2024-05-31T19:26:43,850 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,852 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,852 package, please make sure that 'multiqc.modules.happy' is explicitly added 2024-05-31T19:26:43,853 to the `packages` configuration field. 2024-05-31T19:26:43,854 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,855 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,855 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,856 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,857 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,858 If you don't want 'multiqc.modules.happy' to be distributed and are 2024-05-31T19:26:43,858 already explicitly excluding 'multiqc.modules.happy' via 2024-05-31T19:26:43,859 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,859 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,860 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,861 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,862 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,863 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,864 even if it does not contain any `.py` files. 2024-05-31T19:26:43,864 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,865 directory, all directories are treated like packages. 2024-05-31T19:26:43,865 ******************************************************************************** 2024-05-31T19:26:43,866 !! 2024-05-31T19:26:43,866 check.warn(importable) 2024-05-31T19:26:43,866 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicexplorer' is absent from the `packages` configuration. 2024-05-31T19:26:43,867 !! 2024-05-31T19:26:43,868 ******************************************************************************** 2024-05-31T19:26:43,868 ############################ 2024-05-31T19:26:43,869 # Package would be ignored # 2024-05-31T19:26:43,869 ############################ 2024-05-31T19:26:43,869 Python recognizes 'multiqc.modules.hicexplorer' as an importable package[^1], 2024-05-31T19:26:43,870 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,871 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,871 package, please make sure that 'multiqc.modules.hicexplorer' is explicitly added 2024-05-31T19:26:43,871 to the `packages` configuration field. 2024-05-31T19:26:43,872 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,872 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,873 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,874 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,875 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,876 If you don't want 'multiqc.modules.hicexplorer' to be distributed and are 2024-05-31T19:26:43,876 already explicitly excluding 'multiqc.modules.hicexplorer' via 2024-05-31T19:26:43,877 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,877 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,878 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,878 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,879 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,881 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,881 even if it does not contain any `.py` files. 2024-05-31T19:26:43,882 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,882 directory, all directories are treated like packages. 2024-05-31T19:26:43,882 ******************************************************************************** 2024-05-31T19:26:43,883 !! 2024-05-31T19:26:43,884 check.warn(importable) 2024-05-31T19:26:43,884 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicpro' is absent from the `packages` configuration. 2024-05-31T19:26:43,885 !! 2024-05-31T19:26:43,886 ******************************************************************************** 2024-05-31T19:26:43,886 ############################ 2024-05-31T19:26:43,887 # Package would be ignored # 2024-05-31T19:26:43,887 ############################ 2024-05-31T19:26:43,888 Python recognizes 'multiqc.modules.hicpro' as an importable package[^1], 2024-05-31T19:26:43,888 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,889 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,890 package, please make sure that 'multiqc.modules.hicpro' is explicitly added 2024-05-31T19:26:43,890 to the `packages` configuration field. 2024-05-31T19:26:43,891 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,891 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,892 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,892 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,893 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,894 If you don't want 'multiqc.modules.hicpro' to be distributed and are 2024-05-31T19:26:43,894 already explicitly excluding 'multiqc.modules.hicpro' via 2024-05-31T19:26:43,894 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,895 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,895 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,896 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,897 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,898 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,899 even if it does not contain any `.py` files. 2024-05-31T19:26:43,899 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,900 directory, all directories are treated like packages. 2024-05-31T19:26:43,900 ******************************************************************************** 2024-05-31T19:26:43,901 !! 2024-05-31T19:26:43,902 check.warn(importable) 2024-05-31T19:26:43,902 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hicup' is absent from the `packages` configuration. 2024-05-31T19:26:43,902 !! 2024-05-31T19:26:43,903 ******************************************************************************** 2024-05-31T19:26:43,904 ############################ 2024-05-31T19:26:43,904 # Package would be ignored # 2024-05-31T19:26:43,905 ############################ 2024-05-31T19:26:43,905 Python recognizes 'multiqc.modules.hicup' as an importable package[^1], 2024-05-31T19:26:43,906 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,907 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,907 package, please make sure that 'multiqc.modules.hicup' is explicitly added 2024-05-31T19:26:43,907 to the `packages` configuration field. 2024-05-31T19:26:43,908 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,909 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,909 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,910 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,911 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,912 If you don't want 'multiqc.modules.hicup' to be distributed and are 2024-05-31T19:26:43,912 already explicitly excluding 'multiqc.modules.hicup' via 2024-05-31T19:26:43,913 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,913 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,914 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,915 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,916 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,917 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,917 even if it does not contain any `.py` files. 2024-05-31T19:26:43,918 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,918 directory, all directories are treated like packages. 2024-05-31T19:26:43,918 ******************************************************************************** 2024-05-31T19:26:43,919 !! 2024-05-31T19:26:43,919 check.warn(importable) 2024-05-31T19:26:43,920 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hifiasm' is absent from the `packages` configuration. 2024-05-31T19:26:43,920 !! 2024-05-31T19:26:43,921 ******************************************************************************** 2024-05-31T19:26:43,921 ############################ 2024-05-31T19:26:43,922 # Package would be ignored # 2024-05-31T19:26:43,922 ############################ 2024-05-31T19:26:43,923 Python recognizes 'multiqc.modules.hifiasm' as an importable package[^1], 2024-05-31T19:26:43,923 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,924 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,925 package, please make sure that 'multiqc.modules.hifiasm' is explicitly added 2024-05-31T19:26:43,925 to the `packages` configuration field. 2024-05-31T19:26:43,926 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,927 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,927 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,928 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,929 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,930 If you don't want 'multiqc.modules.hifiasm' to be distributed and are 2024-05-31T19:26:43,930 already explicitly excluding 'multiqc.modules.hifiasm' via 2024-05-31T19:26:43,931 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,931 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,932 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,933 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,934 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,935 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,935 even if it does not contain any `.py` files. 2024-05-31T19:26:43,936 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,936 directory, all directories are treated like packages. 2024-05-31T19:26:43,937 ******************************************************************************** 2024-05-31T19:26:43,938 !! 2024-05-31T19:26:43,938 check.warn(importable) 2024-05-31T19:26:43,939 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hisat2' is absent from the `packages` configuration. 2024-05-31T19:26:43,939 !! 2024-05-31T19:26:43,941 ******************************************************************************** 2024-05-31T19:26:43,941 ############################ 2024-05-31T19:26:43,941 # Package would be ignored # 2024-05-31T19:26:43,942 ############################ 2024-05-31T19:26:43,942 Python recognizes 'multiqc.modules.hisat2' as an importable package[^1], 2024-05-31T19:26:43,942 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,943 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,943 package, please make sure that 'multiqc.modules.hisat2' is explicitly added 2024-05-31T19:26:43,943 to the `packages` configuration field. 2024-05-31T19:26:43,944 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,944 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,945 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,946 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,946 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,947 If you don't want 'multiqc.modules.hisat2' to be distributed and are 2024-05-31T19:26:43,948 already explicitly excluding 'multiqc.modules.hisat2' via 2024-05-31T19:26:43,948 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,948 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,949 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,950 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,951 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,952 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,953 even if it does not contain any `.py` files. 2024-05-31T19:26:43,953 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,954 directory, all directories are treated like packages. 2024-05-31T19:26:43,954 ******************************************************************************** 2024-05-31T19:26:43,955 !! 2024-05-31T19:26:43,956 check.warn(importable) 2024-05-31T19:26:43,956 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.homer' is absent from the `packages` configuration. 2024-05-31T19:26:43,957 !! 2024-05-31T19:26:43,958 ******************************************************************************** 2024-05-31T19:26:43,958 ############################ 2024-05-31T19:26:43,959 # Package would be ignored # 2024-05-31T19:26:43,959 ############################ 2024-05-31T19:26:43,960 Python recognizes 'multiqc.modules.homer' as an importable package[^1], 2024-05-31T19:26:43,960 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,961 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,962 package, please make sure that 'multiqc.modules.homer' is explicitly added 2024-05-31T19:26:43,962 to the `packages` configuration field. 2024-05-31T19:26:43,963 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,964 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,964 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,965 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,966 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,967 If you don't want 'multiqc.modules.homer' to be distributed and are 2024-05-31T19:26:43,967 already explicitly excluding 'multiqc.modules.homer' via 2024-05-31T19:26:43,968 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,968 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,968 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,969 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,970 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,971 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,972 even if it does not contain any `.py` files. 2024-05-31T19:26:43,972 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,972 directory, all directories are treated like packages. 2024-05-31T19:26:43,973 ******************************************************************************** 2024-05-31T19:26:43,973 !! 2024-05-31T19:26:43,974 check.warn(importable) 2024-05-31T19:26:43,974 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hops' is absent from the `packages` configuration. 2024-05-31T19:26:43,975 !! 2024-05-31T19:26:43,975 ******************************************************************************** 2024-05-31T19:26:43,976 ############################ 2024-05-31T19:26:43,976 # Package would be ignored # 2024-05-31T19:26:43,977 ############################ 2024-05-31T19:26:43,977 Python recognizes 'multiqc.modules.hops' as an importable package[^1], 2024-05-31T19:26:43,978 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,978 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,979 package, please make sure that 'multiqc.modules.hops' is explicitly added 2024-05-31T19:26:43,979 to the `packages` configuration field. 2024-05-31T19:26:43,980 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,980 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,981 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,982 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,983 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:43,983 If you don't want 'multiqc.modules.hops' to be distributed and are 2024-05-31T19:26:43,984 already explicitly excluding 'multiqc.modules.hops' via 2024-05-31T19:26:43,984 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:43,985 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:43,985 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:43,986 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:43,987 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:43,988 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:43,989 even if it does not contain any `.py` files. 2024-05-31T19:26:43,989 On the other hand, currently there is no concept of package data 2024-05-31T19:26:43,989 directory, all directories are treated like packages. 2024-05-31T19:26:43,990 ******************************************************************************** 2024-05-31T19:26:43,991 !! 2024-05-31T19:26:43,991 check.warn(importable) 2024-05-31T19:26:43,992 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.hostile' is absent from the `packages` configuration. 2024-05-31T19:26:43,992 !! 2024-05-31T19:26:43,993 ******************************************************************************** 2024-05-31T19:26:43,993 ############################ 2024-05-31T19:26:43,994 # Package would be ignored # 2024-05-31T19:26:43,994 ############################ 2024-05-31T19:26:43,994 Python recognizes 'multiqc.modules.hostile' as an importable package[^1], 2024-05-31T19:26:43,995 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:43,995 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:43,996 package, please make sure that 'multiqc.modules.hostile' is explicitly added 2024-05-31T19:26:43,996 to the `packages` configuration field. 2024-05-31T19:26:43,997 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:43,997 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:43,998 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:43,998 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:43,999 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,000 If you don't want 'multiqc.modules.hostile' to be distributed and are 2024-05-31T19:26:44,000 already explicitly excluding 'multiqc.modules.hostile' via 2024-05-31T19:26:44,001 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,001 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,002 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,003 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,003 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,005 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,005 even if it does not contain any `.py` files. 2024-05-31T19:26:44,005 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,006 directory, all directories are treated like packages. 2024-05-31T19:26:44,006 ******************************************************************************** 2024-05-31T19:26:44,007 !! 2024-05-31T19:26:44,008 check.warn(importable) 2024-05-31T19:26:44,008 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.htseq' is absent from the `packages` configuration. 2024-05-31T19:26:44,008 !! 2024-05-31T19:26:44,009 ******************************************************************************** 2024-05-31T19:26:44,010 ############################ 2024-05-31T19:26:44,010 # Package would be ignored # 2024-05-31T19:26:44,011 ############################ 2024-05-31T19:26:44,011 Python recognizes 'multiqc.modules.htseq' as an importable package[^1], 2024-05-31T19:26:44,012 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,012 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,013 package, please make sure that 'multiqc.modules.htseq' is explicitly added 2024-05-31T19:26:44,013 to the `packages` configuration field. 2024-05-31T19:26:44,015 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,015 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,016 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,016 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,017 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,017 If you don't want 'multiqc.modules.htseq' to be distributed and are 2024-05-31T19:26:44,018 already explicitly excluding 'multiqc.modules.htseq' via 2024-05-31T19:26:44,018 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,018 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,019 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,020 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,021 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,022 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,022 even if it does not contain any `.py` files. 2024-05-31T19:26:44,023 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,023 directory, all directories are treated like packages. 2024-05-31T19:26:44,024 ******************************************************************************** 2024-05-31T19:26:44,024 !! 2024-05-31T19:26:44,025 check.warn(importable) 2024-05-31T19:26:44,025 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.humid' is absent from the `packages` configuration. 2024-05-31T19:26:44,026 !! 2024-05-31T19:26:44,027 ******************************************************************************** 2024-05-31T19:26:44,027 ############################ 2024-05-31T19:26:44,027 # Package would be ignored # 2024-05-31T19:26:44,028 ############################ 2024-05-31T19:26:44,028 Python recognizes 'multiqc.modules.humid' as an importable package[^1], 2024-05-31T19:26:44,028 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,030 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,030 package, please make sure that 'multiqc.modules.humid' is explicitly added 2024-05-31T19:26:44,031 to the `packages` configuration field. 2024-05-31T19:26:44,032 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,032 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,033 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,034 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,035 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,035 If you don't want 'multiqc.modules.humid' to be distributed and are 2024-05-31T19:26:44,036 already explicitly excluding 'multiqc.modules.humid' via 2024-05-31T19:26:44,036 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,037 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,037 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,038 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,039 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,040 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,041 even if it does not contain any `.py` files. 2024-05-31T19:26:44,041 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,041 directory, all directories are treated like packages. 2024-05-31T19:26:44,042 ******************************************************************************** 2024-05-31T19:26:44,042 !! 2024-05-31T19:26:44,043 check.warn(importable) 2024-05-31T19:26:44,043 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.interop' is absent from the `packages` configuration. 2024-05-31T19:26:44,043 !! 2024-05-31T19:26:44,044 ******************************************************************************** 2024-05-31T19:26:44,044 ############################ 2024-05-31T19:26:44,045 # Package would be ignored # 2024-05-31T19:26:44,045 ############################ 2024-05-31T19:26:44,046 Python recognizes 'multiqc.modules.interop' as an importable package[^1], 2024-05-31T19:26:44,046 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,047 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,047 package, please make sure that 'multiqc.modules.interop' is explicitly added 2024-05-31T19:26:44,048 to the `packages` configuration field. 2024-05-31T19:26:44,048 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,049 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,049 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,050 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,051 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,052 If you don't want 'multiqc.modules.interop' to be distributed and are 2024-05-31T19:26:44,053 already explicitly excluding 'multiqc.modules.interop' via 2024-05-31T19:26:44,053 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,054 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,054 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,055 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,056 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,058 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,058 even if it does not contain any `.py` files. 2024-05-31T19:26:44,059 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,059 directory, all directories are treated like packages. 2024-05-31T19:26:44,060 ******************************************************************************** 2024-05-31T19:26:44,061 !! 2024-05-31T19:26:44,061 check.warn(importable) 2024-05-31T19:26:44,062 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.isoseq' is absent from the `packages` configuration. 2024-05-31T19:26:44,062 !! 2024-05-31T19:26:44,063 ******************************************************************************** 2024-05-31T19:26:44,064 ############################ 2024-05-31T19:26:44,064 # Package would be ignored # 2024-05-31T19:26:44,065 ############################ 2024-05-31T19:26:44,065 Python recognizes 'multiqc.modules.isoseq' as an importable package[^1], 2024-05-31T19:26:44,066 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,067 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,067 package, please make sure that 'multiqc.modules.isoseq' is explicitly added 2024-05-31T19:26:44,067 to the `packages` configuration field. 2024-05-31T19:26:44,068 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,068 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,069 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,069 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,070 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,071 If you don't want 'multiqc.modules.isoseq' to be distributed and are 2024-05-31T19:26:44,071 already explicitly excluding 'multiqc.modules.isoseq' via 2024-05-31T19:26:44,071 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,072 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,072 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,073 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,074 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,075 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,076 even if it does not contain any `.py` files. 2024-05-31T19:26:44,076 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,076 directory, all directories are treated like packages. 2024-05-31T19:26:44,077 ******************************************************************************** 2024-05-31T19:26:44,078 !! 2024-05-31T19:26:44,078 check.warn(importable) 2024-05-31T19:26:44,079 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ivar' is absent from the `packages` configuration. 2024-05-31T19:26:44,079 !! 2024-05-31T19:26:44,080 ******************************************************************************** 2024-05-31T19:26:44,080 ############################ 2024-05-31T19:26:44,081 # Package would be ignored # 2024-05-31T19:26:44,081 ############################ 2024-05-31T19:26:44,082 Python recognizes 'multiqc.modules.ivar' as an importable package[^1], 2024-05-31T19:26:44,082 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,083 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,083 package, please make sure that 'multiqc.modules.ivar' is explicitly added 2024-05-31T19:26:44,084 to the `packages` configuration field. 2024-05-31T19:26:44,085 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,085 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,086 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,087 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,088 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,089 If you don't want 'multiqc.modules.ivar' to be distributed and are 2024-05-31T19:26:44,089 already explicitly excluding 'multiqc.modules.ivar' via 2024-05-31T19:26:44,090 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,090 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,091 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,091 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,092 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,093 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,093 even if it does not contain any `.py` files. 2024-05-31T19:26:44,094 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,094 directory, all directories are treated like packages. 2024-05-31T19:26:44,095 ******************************************************************************** 2024-05-31T19:26:44,095 !! 2024-05-31T19:26:44,096 check.warn(importable) 2024-05-31T19:26:44,096 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.jcvi' is absent from the `packages` configuration. 2024-05-31T19:26:44,097 !! 2024-05-31T19:26:44,097 ******************************************************************************** 2024-05-31T19:26:44,098 ############################ 2024-05-31T19:26:44,098 # Package would be ignored # 2024-05-31T19:26:44,099 ############################ 2024-05-31T19:26:44,099 Python recognizes 'multiqc.modules.jcvi' as an importable package[^1], 2024-05-31T19:26:44,099 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,100 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,100 package, please make sure that 'multiqc.modules.jcvi' is explicitly added 2024-05-31T19:26:44,101 to the `packages` configuration field. 2024-05-31T19:26:44,102 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,102 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,102 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,104 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,104 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,105 If you don't want 'multiqc.modules.jcvi' to be distributed and are 2024-05-31T19:26:44,106 already explicitly excluding 'multiqc.modules.jcvi' via 2024-05-31T19:26:44,106 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,106 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,107 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,108 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,109 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,110 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,111 even if it does not contain any `.py` files. 2024-05-31T19:26:44,111 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,111 directory, all directories are treated like packages. 2024-05-31T19:26:44,112 ******************************************************************************** 2024-05-31T19:26:44,113 !! 2024-05-31T19:26:44,113 check.warn(importable) 2024-05-31T19:26:44,114 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.jellyfish' is absent from the `packages` configuration. 2024-05-31T19:26:44,114 !! 2024-05-31T19:26:44,115 ******************************************************************************** 2024-05-31T19:26:44,115 ############################ 2024-05-31T19:26:44,116 # Package would be ignored # 2024-05-31T19:26:44,116 ############################ 2024-05-31T19:26:44,116 Python recognizes 'multiqc.modules.jellyfish' as an importable package[^1], 2024-05-31T19:26:44,117 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,117 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,118 package, please make sure that 'multiqc.modules.jellyfish' is explicitly added 2024-05-31T19:26:44,118 to the `packages` configuration field. 2024-05-31T19:26:44,119 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,119 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,119 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,120 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,121 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,122 If you don't want 'multiqc.modules.jellyfish' to be distributed and are 2024-05-31T19:26:44,122 already explicitly excluding 'multiqc.modules.jellyfish' via 2024-05-31T19:26:44,123 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,123 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,123 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,124 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,125 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,127 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,127 even if it does not contain any `.py` files. 2024-05-31T19:26:44,128 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,128 directory, all directories are treated like packages. 2024-05-31T19:26:44,129 ******************************************************************************** 2024-05-31T19:26:44,130 !! 2024-05-31T19:26:44,130 check.warn(importable) 2024-05-31T19:26:44,130 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kaiju' is absent from the `packages` configuration. 2024-05-31T19:26:44,131 !! 2024-05-31T19:26:44,132 ******************************************************************************** 2024-05-31T19:26:44,132 ############################ 2024-05-31T19:26:44,133 # Package would be ignored # 2024-05-31T19:26:44,133 ############################ 2024-05-31T19:26:44,134 Python recognizes 'multiqc.modules.kaiju' as an importable package[^1], 2024-05-31T19:26:44,134 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,135 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,135 package, please make sure that 'multiqc.modules.kaiju' is explicitly added 2024-05-31T19:26:44,136 to the `packages` configuration field. 2024-05-31T19:26:44,137 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,138 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,139 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,140 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,141 If you don't want 'multiqc.modules.kaiju' to be distributed and are 2024-05-31T19:26:44,141 already explicitly excluding 'multiqc.modules.kaiju' via 2024-05-31T19:26:44,142 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,142 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,142 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,143 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,144 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,145 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,145 even if it does not contain any `.py` files. 2024-05-31T19:26:44,145 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,146 directory, all directories are treated like packages. 2024-05-31T19:26:44,146 ******************************************************************************** 2024-05-31T19:26:44,147 !! 2024-05-31T19:26:44,147 check.warn(importable) 2024-05-31T19:26:44,147 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kallisto' is absent from the `packages` configuration. 2024-05-31T19:26:44,148 !! 2024-05-31T19:26:44,149 ******************************************************************************** 2024-05-31T19:26:44,149 ############################ 2024-05-31T19:26:44,150 # Package would be ignored # 2024-05-31T19:26:44,150 ############################ 2024-05-31T19:26:44,151 Python recognizes 'multiqc.modules.kallisto' as an importable package[^1], 2024-05-31T19:26:44,151 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,152 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,153 package, please make sure that 'multiqc.modules.kallisto' is explicitly added 2024-05-31T19:26:44,153 to the `packages` configuration field. 2024-05-31T19:26:44,154 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,155 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,155 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,156 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,157 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,158 If you don't want 'multiqc.modules.kallisto' to be distributed and are 2024-05-31T19:26:44,158 already explicitly excluding 'multiqc.modules.kallisto' via 2024-05-31T19:26:44,159 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,159 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,159 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,160 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,161 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,163 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,163 even if it does not contain any `.py` files. 2024-05-31T19:26:44,164 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,164 directory, all directories are treated like packages. 2024-05-31T19:26:44,165 ******************************************************************************** 2024-05-31T19:26:44,166 !! 2024-05-31T19:26:44,166 check.warn(importable) 2024-05-31T19:26:44,167 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kat' is absent from the `packages` configuration. 2024-05-31T19:26:44,167 !! 2024-05-31T19:26:44,168 ******************************************************************************** 2024-05-31T19:26:44,168 ############################ 2024-05-31T19:26:44,168 # Package would be ignored # 2024-05-31T19:26:44,169 ############################ 2024-05-31T19:26:44,169 Python recognizes 'multiqc.modules.kat' as an importable package[^1], 2024-05-31T19:26:44,169 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,170 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,170 package, please make sure that 'multiqc.modules.kat' is explicitly added 2024-05-31T19:26:44,171 to the `packages` configuration field. 2024-05-31T19:26:44,172 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,172 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,173 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,173 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,174 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,175 If you don't want 'multiqc.modules.kat' to be distributed and are 2024-05-31T19:26:44,176 already explicitly excluding 'multiqc.modules.kat' via 2024-05-31T19:26:44,177 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,177 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,178 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,179 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,180 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,181 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,181 even if it does not contain any `.py` files. 2024-05-31T19:26:44,182 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,182 directory, all directories are treated like packages. 2024-05-31T19:26:44,183 ******************************************************************************** 2024-05-31T19:26:44,184 !! 2024-05-31T19:26:44,184 check.warn(importable) 2024-05-31T19:26:44,185 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.kraken' is absent from the `packages` configuration. 2024-05-31T19:26:44,185 !! 2024-05-31T19:26:44,186 ******************************************************************************** 2024-05-31T19:26:44,187 ############################ 2024-05-31T19:26:44,187 # Package would be ignored # 2024-05-31T19:26:44,188 ############################ 2024-05-31T19:26:44,188 Python recognizes 'multiqc.modules.kraken' as an importable package[^1], 2024-05-31T19:26:44,189 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,190 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,190 package, please make sure that 'multiqc.modules.kraken' is explicitly added 2024-05-31T19:26:44,191 to the `packages` configuration field. 2024-05-31T19:26:44,192 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,192 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,192 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,193 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,194 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,195 If you don't want 'multiqc.modules.kraken' to be distributed and are 2024-05-31T19:26:44,195 already explicitly excluding 'multiqc.modules.kraken' via 2024-05-31T19:26:44,195 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,196 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,196 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,197 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,198 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,199 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,199 even if it does not contain any `.py` files. 2024-05-31T19:26:44,200 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,200 directory, all directories are treated like packages. 2024-05-31T19:26:44,201 ******************************************************************************** 2024-05-31T19:26:44,202 !! 2024-05-31T19:26:44,202 check.warn(importable) 2024-05-31T19:26:44,203 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.leehom' is absent from the `packages` configuration. 2024-05-31T19:26:44,204 !! 2024-05-31T19:26:44,205 ******************************************************************************** 2024-05-31T19:26:44,205 ############################ 2024-05-31T19:26:44,205 # Package would be ignored # 2024-05-31T19:26:44,206 ############################ 2024-05-31T19:26:44,207 Python recognizes 'multiqc.modules.leehom' as an importable package[^1], 2024-05-31T19:26:44,207 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,208 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,208 package, please make sure that 'multiqc.modules.leehom' is explicitly added 2024-05-31T19:26:44,209 to the `packages` configuration field. 2024-05-31T19:26:44,210 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,210 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,210 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,211 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,212 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,213 If you don't want 'multiqc.modules.leehom' to be distributed and are 2024-05-31T19:26:44,214 already explicitly excluding 'multiqc.modules.leehom' via 2024-05-31T19:26:44,214 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,215 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,215 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,216 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,217 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,219 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,219 even if it does not contain any `.py` files. 2024-05-31T19:26:44,219 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,220 directory, all directories are treated like packages. 2024-05-31T19:26:44,220 ******************************************************************************** 2024-05-31T19:26:44,221 !! 2024-05-31T19:26:44,221 check.warn(importable) 2024-05-31T19:26:44,221 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.librarian' is absent from the `packages` configuration. 2024-05-31T19:26:44,222 !! 2024-05-31T19:26:44,223 ******************************************************************************** 2024-05-31T19:26:44,223 ############################ 2024-05-31T19:26:44,224 # Package would be ignored # 2024-05-31T19:26:44,224 ############################ 2024-05-31T19:26:44,224 Python recognizes 'multiqc.modules.librarian' as an importable package[^1], 2024-05-31T19:26:44,225 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,226 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,226 package, please make sure that 'multiqc.modules.librarian' is explicitly added 2024-05-31T19:26:44,226 to the `packages` configuration field. 2024-05-31T19:26:44,227 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,227 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,228 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,229 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,230 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,230 If you don't want 'multiqc.modules.librarian' to be distributed and are 2024-05-31T19:26:44,231 already explicitly excluding 'multiqc.modules.librarian' via 2024-05-31T19:26:44,231 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,232 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,232 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,233 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,234 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,235 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,235 even if it does not contain any `.py` files. 2024-05-31T19:26:44,236 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,236 directory, all directories are treated like packages. 2024-05-31T19:26:44,237 ******************************************************************************** 2024-05-31T19:26:44,238 !! 2024-05-31T19:26:44,238 check.warn(importable) 2024-05-31T19:26:44,238 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.lima' is absent from the `packages` configuration. 2024-05-31T19:26:44,239 !! 2024-05-31T19:26:44,240 ******************************************************************************** 2024-05-31T19:26:44,240 ############################ 2024-05-31T19:26:44,241 # Package would be ignored # 2024-05-31T19:26:44,241 ############################ 2024-05-31T19:26:44,242 Python recognizes 'multiqc.modules.lima' as an importable package[^1], 2024-05-31T19:26:44,243 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,243 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,244 package, please make sure that 'multiqc.modules.lima' is explicitly added 2024-05-31T19:26:44,244 to the `packages` configuration field. 2024-05-31T19:26:44,245 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,245 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,246 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,246 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,247 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,248 If you don't want 'multiqc.modules.lima' to be distributed and are 2024-05-31T19:26:44,248 already explicitly excluding 'multiqc.modules.lima' via 2024-05-31T19:26:44,248 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,249 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,249 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,250 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,251 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,252 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,252 even if it does not contain any `.py` files. 2024-05-31T19:26:44,253 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,253 directory, all directories are treated like packages. 2024-05-31T19:26:44,254 ******************************************************************************** 2024-05-31T19:26:44,255 !! 2024-05-31T19:26:44,255 check.warn(importable) 2024-05-31T19:26:44,255 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.longranger' is absent from the `packages` configuration. 2024-05-31T19:26:44,256 !! 2024-05-31T19:26:44,257 ******************************************************************************** 2024-05-31T19:26:44,257 ############################ 2024-05-31T19:26:44,258 # Package would be ignored # 2024-05-31T19:26:44,259 ############################ 2024-05-31T19:26:44,259 Python recognizes 'multiqc.modules.longranger' as an importable package[^1], 2024-05-31T19:26:44,260 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,261 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,261 package, please make sure that 'multiqc.modules.longranger' is explicitly added 2024-05-31T19:26:44,262 to the `packages` configuration field. 2024-05-31T19:26:44,263 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,264 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,264 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,265 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,267 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,268 If you don't want 'multiqc.modules.longranger' to be distributed and are 2024-05-31T19:26:44,268 already explicitly excluding 'multiqc.modules.longranger' via 2024-05-31T19:26:44,269 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,270 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,270 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,272 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,273 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,274 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,274 even if it does not contain any `.py` files. 2024-05-31T19:26:44,275 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,275 directory, all directories are treated like packages. 2024-05-31T19:26:44,276 ******************************************************************************** 2024-05-31T19:26:44,277 !! 2024-05-31T19:26:44,277 check.warn(importable) 2024-05-31T19:26:44,278 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.macs2' is absent from the `packages` configuration. 2024-05-31T19:26:44,278 !! 2024-05-31T19:26:44,279 ******************************************************************************** 2024-05-31T19:26:44,280 ############################ 2024-05-31T19:26:44,280 # Package would be ignored # 2024-05-31T19:26:44,281 ############################ 2024-05-31T19:26:44,281 Python recognizes 'multiqc.modules.macs2' as an importable package[^1], 2024-05-31T19:26:44,282 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,283 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,284 package, please make sure that 'multiqc.modules.macs2' is explicitly added 2024-05-31T19:26:44,284 to the `packages` configuration field. 2024-05-31T19:26:44,286 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,286 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,287 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,288 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,289 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,290 If you don't want 'multiqc.modules.macs2' to be distributed and are 2024-05-31T19:26:44,291 already explicitly excluding 'multiqc.modules.macs2' via 2024-05-31T19:26:44,292 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,292 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,293 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,294 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,295 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,297 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,297 even if it does not contain any `.py` files. 2024-05-31T19:26:44,298 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,298 directory, all directories are treated like packages. 2024-05-31T19:26:44,299 ******************************************************************************** 2024-05-31T19:26:44,300 !! 2024-05-31T19:26:44,301 check.warn(importable) 2024-05-31T19:26:44,301 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.malt' is absent from the `packages` configuration. 2024-05-31T19:26:44,302 !! 2024-05-31T19:26:44,303 ******************************************************************************** 2024-05-31T19:26:44,303 ############################ 2024-05-31T19:26:44,304 # Package would be ignored # 2024-05-31T19:26:44,305 ############################ 2024-05-31T19:26:44,305 Python recognizes 'multiqc.modules.malt' as an importable package[^1], 2024-05-31T19:26:44,305 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,306 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,307 package, please make sure that 'multiqc.modules.malt' is explicitly added 2024-05-31T19:26:44,307 to the `packages` configuration field. 2024-05-31T19:26:44,308 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,308 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,309 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,310 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,311 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,312 If you don't want 'multiqc.modules.malt' to be distributed and are 2024-05-31T19:26:44,312 already explicitly excluding 'multiqc.modules.malt' via 2024-05-31T19:26:44,313 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,313 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,314 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,315 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,316 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,318 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,318 even if it does not contain any `.py` files. 2024-05-31T19:26:44,319 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,320 directory, all directories are treated like packages. 2024-05-31T19:26:44,320 ******************************************************************************** 2024-05-31T19:26:44,321 !! 2024-05-31T19:26:44,322 check.warn(importable) 2024-05-31T19:26:44,323 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mapdamage' is absent from the `packages` configuration. 2024-05-31T19:26:44,323 !! 2024-05-31T19:26:44,325 ******************************************************************************** 2024-05-31T19:26:44,325 ############################ 2024-05-31T19:26:44,326 # Package would be ignored # 2024-05-31T19:26:44,326 ############################ 2024-05-31T19:26:44,327 Python recognizes 'multiqc.modules.mapdamage' as an importable package[^1], 2024-05-31T19:26:44,328 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,329 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,329 package, please make sure that 'multiqc.modules.mapdamage' is explicitly added 2024-05-31T19:26:44,330 to the `packages` configuration field. 2024-05-31T19:26:44,331 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,332 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,332 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,333 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,334 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,335 If you don't want 'multiqc.modules.mapdamage' to be distributed and are 2024-05-31T19:26:44,336 already explicitly excluding 'multiqc.modules.mapdamage' via 2024-05-31T19:26:44,336 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,336 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,337 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,338 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,339 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,340 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,340 even if it does not contain any `.py` files. 2024-05-31T19:26:44,341 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,341 directory, all directories are treated like packages. 2024-05-31T19:26:44,342 ******************************************************************************** 2024-05-31T19:26:44,343 !! 2024-05-31T19:26:44,343 check.warn(importable) 2024-05-31T19:26:44,343 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.megahit' is absent from the `packages` configuration. 2024-05-31T19:26:44,344 !! 2024-05-31T19:26:44,345 ******************************************************************************** 2024-05-31T19:26:44,345 ############################ 2024-05-31T19:26:44,346 # Package would be ignored # 2024-05-31T19:26:44,347 ############################ 2024-05-31T19:26:44,347 Python recognizes 'multiqc.modules.megahit' as an importable package[^1], 2024-05-31T19:26:44,348 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,349 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,349 package, please make sure that 'multiqc.modules.megahit' is explicitly added 2024-05-31T19:26:44,350 to the `packages` configuration field. 2024-05-31T19:26:44,351 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,351 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,352 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,353 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,354 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,355 If you don't want 'multiqc.modules.megahit' to be distributed and are 2024-05-31T19:26:44,356 already explicitly excluding 'multiqc.modules.megahit' via 2024-05-31T19:26:44,357 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,358 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,359 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,360 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,361 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,363 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,363 even if it does not contain any `.py` files. 2024-05-31T19:26:44,364 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,365 directory, all directories are treated like packages. 2024-05-31T19:26:44,365 ******************************************************************************** 2024-05-31T19:26:44,366 !! 2024-05-31T19:26:44,366 check.warn(importable) 2024-05-31T19:26:44,367 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.metaphlan' is absent from the `packages` configuration. 2024-05-31T19:26:44,367 !! 2024-05-31T19:26:44,368 ******************************************************************************** 2024-05-31T19:26:44,369 ############################ 2024-05-31T19:26:44,369 # Package would be ignored # 2024-05-31T19:26:44,370 ############################ 2024-05-31T19:26:44,370 Python recognizes 'multiqc.modules.metaphlan' as an importable package[^1], 2024-05-31T19:26:44,371 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,372 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,372 package, please make sure that 'multiqc.modules.metaphlan' is explicitly added 2024-05-31T19:26:44,373 to the `packages` configuration field. 2024-05-31T19:26:44,374 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,375 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,375 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,376 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,377 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,378 If you don't want 'multiqc.modules.metaphlan' to be distributed and are 2024-05-31T19:26:44,379 already explicitly excluding 'multiqc.modules.metaphlan' via 2024-05-31T19:26:44,379 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,380 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,381 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,382 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,383 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,385 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,386 even if it does not contain any `.py` files. 2024-05-31T19:26:44,386 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,387 directory, all directories are treated like packages. 2024-05-31T19:26:44,387 ******************************************************************************** 2024-05-31T19:26:44,388 !! 2024-05-31T19:26:44,389 check.warn(importable) 2024-05-31T19:26:44,389 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.methylqa' is absent from the `packages` configuration. 2024-05-31T19:26:44,390 !! 2024-05-31T19:26:44,391 ******************************************************************************** 2024-05-31T19:26:44,392 ############################ 2024-05-31T19:26:44,392 # Package would be ignored # 2024-05-31T19:26:44,393 ############################ 2024-05-31T19:26:44,393 Python recognizes 'multiqc.modules.methylqa' as an importable package[^1], 2024-05-31T19:26:44,394 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,395 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,396 package, please make sure that 'multiqc.modules.methylqa' is explicitly added 2024-05-31T19:26:44,397 to the `packages` configuration field. 2024-05-31T19:26:44,398 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,398 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,399 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,400 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,400 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,401 If you don't want 'multiqc.modules.methylqa' to be distributed and are 2024-05-31T19:26:44,402 already explicitly excluding 'multiqc.modules.methylqa' via 2024-05-31T19:26:44,402 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,403 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,403 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,404 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,405 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,407 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,407 even if it does not contain any `.py` files. 2024-05-31T19:26:44,407 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,408 directory, all directories are treated like packages. 2024-05-31T19:26:44,409 ******************************************************************************** 2024-05-31T19:26:44,410 !! 2024-05-31T19:26:44,410 check.warn(importable) 2024-05-31T19:26:44,411 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.minionqc' is absent from the `packages` configuration. 2024-05-31T19:26:44,412 !! 2024-05-31T19:26:44,412 ******************************************************************************** 2024-05-31T19:26:44,413 ############################ 2024-05-31T19:26:44,414 # Package would be ignored # 2024-05-31T19:26:44,414 ############################ 2024-05-31T19:26:44,415 Python recognizes 'multiqc.modules.minionqc' as an importable package[^1], 2024-05-31T19:26:44,415 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,417 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,417 package, please make sure that 'multiqc.modules.minionqc' is explicitly added 2024-05-31T19:26:44,418 to the `packages` configuration field. 2024-05-31T19:26:44,419 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,420 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,420 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,421 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,423 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,424 If you don't want 'multiqc.modules.minionqc' to be distributed and are 2024-05-31T19:26:44,424 already explicitly excluding 'multiqc.modules.minionqc' via 2024-05-31T19:26:44,425 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,426 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,426 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,427 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,428 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,430 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,430 even if it does not contain any `.py` files. 2024-05-31T19:26:44,430 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,431 directory, all directories are treated like packages. 2024-05-31T19:26:44,431 ******************************************************************************** 2024-05-31T19:26:44,432 !! 2024-05-31T19:26:44,433 check.warn(importable) 2024-05-31T19:26:44,433 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mirtop' is absent from the `packages` configuration. 2024-05-31T19:26:44,434 !! 2024-05-31T19:26:44,435 ******************************************************************************** 2024-05-31T19:26:44,435 ############################ 2024-05-31T19:26:44,436 # Package would be ignored # 2024-05-31T19:26:44,436 ############################ 2024-05-31T19:26:44,437 Python recognizes 'multiqc.modules.mirtop' as an importable package[^1], 2024-05-31T19:26:44,437 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,438 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,439 package, please make sure that 'multiqc.modules.mirtop' is explicitly added 2024-05-31T19:26:44,439 to the `packages` configuration field. 2024-05-31T19:26:44,440 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,441 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,441 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,442 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,444 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,445 If you don't want 'multiqc.modules.mirtop' to be distributed and are 2024-05-31T19:26:44,446 already explicitly excluding 'multiqc.modules.mirtop' via 2024-05-31T19:26:44,446 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,447 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,448 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,449 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,450 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,452 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,453 even if it does not contain any `.py` files. 2024-05-31T19:26:44,453 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,454 directory, all directories are treated like packages. 2024-05-31T19:26:44,454 ******************************************************************************** 2024-05-31T19:26:44,456 !! 2024-05-31T19:26:44,456 check.warn(importable) 2024-05-31T19:26:44,457 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mirtrace' is absent from the `packages` configuration. 2024-05-31T19:26:44,458 !! 2024-05-31T19:26:44,459 ******************************************************************************** 2024-05-31T19:26:44,460 ############################ 2024-05-31T19:26:44,461 # Package would be ignored # 2024-05-31T19:26:44,461 ############################ 2024-05-31T19:26:44,462 Python recognizes 'multiqc.modules.mirtrace' as an importable package[^1], 2024-05-31T19:26:44,462 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,463 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,463 package, please make sure that 'multiqc.modules.mirtrace' is explicitly added 2024-05-31T19:26:44,464 to the `packages` configuration field. 2024-05-31T19:26:44,465 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,465 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,466 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,467 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,468 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,469 If you don't want 'multiqc.modules.mirtrace' to be distributed and are 2024-05-31T19:26:44,469 already explicitly excluding 'multiqc.modules.mirtrace' via 2024-05-31T19:26:44,470 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,470 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,471 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,472 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,473 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,475 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,475 even if it does not contain any `.py` files. 2024-05-31T19:26:44,476 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,476 directory, all directories are treated like packages. 2024-05-31T19:26:44,477 ******************************************************************************** 2024-05-31T19:26:44,478 !! 2024-05-31T19:26:44,479 check.warn(importable) 2024-05-31T19:26:44,479 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mosdepth' is absent from the `packages` configuration. 2024-05-31T19:26:44,480 !! 2024-05-31T19:26:44,481 ******************************************************************************** 2024-05-31T19:26:44,482 ############################ 2024-05-31T19:26:44,482 # Package would be ignored # 2024-05-31T19:26:44,483 ############################ 2024-05-31T19:26:44,483 Python recognizes 'multiqc.modules.mosdepth' as an importable package[^1], 2024-05-31T19:26:44,484 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,485 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,485 package, please make sure that 'multiqc.modules.mosdepth' is explicitly added 2024-05-31T19:26:44,486 to the `packages` configuration field. 2024-05-31T19:26:44,487 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,487 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,488 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,489 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,490 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,492 If you don't want 'multiqc.modules.mosdepth' to be distributed and are 2024-05-31T19:26:44,492 already explicitly excluding 'multiqc.modules.mosdepth' via 2024-05-31T19:26:44,493 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,493 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,494 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,494 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,495 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,497 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,497 even if it does not contain any `.py` files. 2024-05-31T19:26:44,498 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,498 directory, all directories are treated like packages. 2024-05-31T19:26:44,499 ******************************************************************************** 2024-05-31T19:26:44,500 !! 2024-05-31T19:26:44,500 check.warn(importable) 2024-05-31T19:26:44,501 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.motus' is absent from the `packages` configuration. 2024-05-31T19:26:44,501 !! 2024-05-31T19:26:44,502 ******************************************************************************** 2024-05-31T19:26:44,503 ############################ 2024-05-31T19:26:44,503 # Package would be ignored # 2024-05-31T19:26:44,504 ############################ 2024-05-31T19:26:44,504 Python recognizes 'multiqc.modules.motus' as an importable package[^1], 2024-05-31T19:26:44,505 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,506 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,506 package, please make sure that 'multiqc.modules.motus' is explicitly added 2024-05-31T19:26:44,507 to the `packages` configuration field. 2024-05-31T19:26:44,508 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,508 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,509 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,510 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,511 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,512 If you don't want 'multiqc.modules.motus' to be distributed and are 2024-05-31T19:26:44,513 already explicitly excluding 'multiqc.modules.motus' via 2024-05-31T19:26:44,513 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,514 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,514 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,515 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,517 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,518 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,519 even if it does not contain any `.py` files. 2024-05-31T19:26:44,519 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,520 directory, all directories are treated like packages. 2024-05-31T19:26:44,521 ******************************************************************************** 2024-05-31T19:26:44,522 !! 2024-05-31T19:26:44,522 check.warn(importable) 2024-05-31T19:26:44,523 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.mtnucratio' is absent from the `packages` configuration. 2024-05-31T19:26:44,523 !! 2024-05-31T19:26:44,524 ******************************************************************************** 2024-05-31T19:26:44,524 ############################ 2024-05-31T19:26:44,525 # Package would be ignored # 2024-05-31T19:26:44,525 ############################ 2024-05-31T19:26:44,526 Python recognizes 'multiqc.modules.mtnucratio' as an importable package[^1], 2024-05-31T19:26:44,526 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,527 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,528 package, please make sure that 'multiqc.modules.mtnucratio' is explicitly added 2024-05-31T19:26:44,528 to the `packages` configuration field. 2024-05-31T19:26:44,529 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,530 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,530 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,532 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,533 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,534 If you don't want 'multiqc.modules.mtnucratio' to be distributed and are 2024-05-31T19:26:44,534 already explicitly excluding 'multiqc.modules.mtnucratio' via 2024-05-31T19:26:44,535 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,535 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,536 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,537 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,538 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,540 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,540 even if it does not contain any `.py` files. 2024-05-31T19:26:44,541 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,541 directory, all directories are treated like packages. 2024-05-31T19:26:44,542 ******************************************************************************** 2024-05-31T19:26:44,543 !! 2024-05-31T19:26:44,544 check.warn(importable) 2024-05-31T19:26:44,544 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.multivcfanalyzer' is absent from the `packages` configuration. 2024-05-31T19:26:44,545 !! 2024-05-31T19:26:44,546 ******************************************************************************** 2024-05-31T19:26:44,547 ############################ 2024-05-31T19:26:44,547 # Package would be ignored # 2024-05-31T19:26:44,548 ############################ 2024-05-31T19:26:44,548 Python recognizes 'multiqc.modules.multivcfanalyzer' as an importable package[^1], 2024-05-31T19:26:44,549 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,550 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,551 package, please make sure that 'multiqc.modules.multivcfanalyzer' is explicitly added 2024-05-31T19:26:44,551 to the `packages` configuration field. 2024-05-31T19:26:44,553 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,554 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,554 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,555 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,556 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,557 If you don't want 'multiqc.modules.multivcfanalyzer' to be distributed and are 2024-05-31T19:26:44,557 already explicitly excluding 'multiqc.modules.multivcfanalyzer' via 2024-05-31T19:26:44,558 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,558 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,558 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,559 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,560 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,562 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,562 even if it does not contain any `.py` files. 2024-05-31T19:26:44,563 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,564 directory, all directories are treated like packages. 2024-05-31T19:26:44,564 ******************************************************************************** 2024-05-31T19:26:44,565 !! 2024-05-31T19:26:44,566 check.warn(importable) 2024-05-31T19:26:44,566 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nanostat' is absent from the `packages` configuration. 2024-05-31T19:26:44,567 !! 2024-05-31T19:26:44,568 ******************************************************************************** 2024-05-31T19:26:44,568 ############################ 2024-05-31T19:26:44,569 # Package would be ignored # 2024-05-31T19:26:44,569 ############################ 2024-05-31T19:26:44,570 Python recognizes 'multiqc.modules.nanostat' as an importable package[^1], 2024-05-31T19:26:44,571 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,572 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,572 package, please make sure that 'multiqc.modules.nanostat' is explicitly added 2024-05-31T19:26:44,573 to the `packages` configuration field. 2024-05-31T19:26:44,574 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,575 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,575 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,576 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,577 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,578 If you don't want 'multiqc.modules.nanostat' to be distributed and are 2024-05-31T19:26:44,579 already explicitly excluding 'multiqc.modules.nanostat' via 2024-05-31T19:26:44,580 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,580 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,581 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,582 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,583 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,585 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,585 even if it does not contain any `.py` files. 2024-05-31T19:26:44,586 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,586 directory, all directories are treated like packages. 2024-05-31T19:26:44,587 ******************************************************************************** 2024-05-31T19:26:44,588 !! 2024-05-31T19:26:44,588 check.warn(importable) 2024-05-31T19:26:44,589 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nextclade' is absent from the `packages` configuration. 2024-05-31T19:26:44,589 !! 2024-05-31T19:26:44,590 ******************************************************************************** 2024-05-31T19:26:44,591 ############################ 2024-05-31T19:26:44,591 # Package would be ignored # 2024-05-31T19:26:44,591 ############################ 2024-05-31T19:26:44,592 Python recognizes 'multiqc.modules.nextclade' as an importable package[^1], 2024-05-31T19:26:44,592 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,593 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,594 package, please make sure that 'multiqc.modules.nextclade' is explicitly added 2024-05-31T19:26:44,594 to the `packages` configuration field. 2024-05-31T19:26:44,595 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,596 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,597 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,598 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,599 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,600 If you don't want 'multiqc.modules.nextclade' to be distributed and are 2024-05-31T19:26:44,600 already explicitly excluding 'multiqc.modules.nextclade' via 2024-05-31T19:26:44,601 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,602 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,602 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,603 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,605 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,606 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,607 even if it does not contain any `.py` files. 2024-05-31T19:26:44,607 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,608 directory, all directories are treated like packages. 2024-05-31T19:26:44,609 ******************************************************************************** 2024-05-31T19:26:44,610 !! 2024-05-31T19:26:44,610 check.warn(importable) 2024-05-31T19:26:44,611 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.ngsderive' is absent from the `packages` configuration. 2024-05-31T19:26:44,611 !! 2024-05-31T19:26:44,613 ******************************************************************************** 2024-05-31T19:26:44,613 ############################ 2024-05-31T19:26:44,614 # Package would be ignored # 2024-05-31T19:26:44,615 ############################ 2024-05-31T19:26:44,615 Python recognizes 'multiqc.modules.ngsderive' as an importable package[^1], 2024-05-31T19:26:44,616 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,617 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,618 package, please make sure that 'multiqc.modules.ngsderive' is explicitly added 2024-05-31T19:26:44,618 to the `packages` configuration field. 2024-05-31T19:26:44,619 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,620 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,620 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,621 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,622 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,623 If you don't want 'multiqc.modules.ngsderive' to be distributed and are 2024-05-31T19:26:44,624 already explicitly excluding 'multiqc.modules.ngsderive' via 2024-05-31T19:26:44,624 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,624 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,625 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,626 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,627 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,629 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,629 even if it does not contain any `.py` files. 2024-05-31T19:26:44,630 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,631 directory, all directories are treated like packages. 2024-05-31T19:26:44,631 ******************************************************************************** 2024-05-31T19:26:44,632 !! 2024-05-31T19:26:44,633 check.warn(importable) 2024-05-31T19:26:44,633 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.nonpareil' is absent from the `packages` configuration. 2024-05-31T19:26:44,634 !! 2024-05-31T19:26:44,635 ******************************************************************************** 2024-05-31T19:26:44,636 ############################ 2024-05-31T19:26:44,636 # Package would be ignored # 2024-05-31T19:26:44,637 ############################ 2024-05-31T19:26:44,637 Python recognizes 'multiqc.modules.nonpareil' as an importable package[^1], 2024-05-31T19:26:44,638 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,639 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,640 package, please make sure that 'multiqc.modules.nonpareil' is explicitly added 2024-05-31T19:26:44,640 to the `packages` configuration field. 2024-05-31T19:26:44,641 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,642 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,642 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,644 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,645 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,646 If you don't want 'multiqc.modules.nonpareil' to be distributed and are 2024-05-31T19:26:44,647 already explicitly excluding 'multiqc.modules.nonpareil' via 2024-05-31T19:26:44,647 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,648 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,648 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,649 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,650 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,652 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,652 even if it does not contain any `.py` files. 2024-05-31T19:26:44,653 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,653 directory, all directories are treated like packages. 2024-05-31T19:26:44,654 ******************************************************************************** 2024-05-31T19:26:44,655 !! 2024-05-31T19:26:44,655 check.warn(importable) 2024-05-31T19:26:44,656 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.odgi' is absent from the `packages` configuration. 2024-05-31T19:26:44,656 !! 2024-05-31T19:26:44,657 ******************************************************************************** 2024-05-31T19:26:44,658 ############################ 2024-05-31T19:26:44,658 # Package would be ignored # 2024-05-31T19:26:44,659 ############################ 2024-05-31T19:26:44,659 Python recognizes 'multiqc.modules.odgi' as an importable package[^1], 2024-05-31T19:26:44,659 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,661 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,661 package, please make sure that 'multiqc.modules.odgi' is explicitly added 2024-05-31T19:26:44,662 to the `packages` configuration field. 2024-05-31T19:26:44,663 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,664 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,664 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,665 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,667 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,668 If you don't want 'multiqc.modules.odgi' to be distributed and are 2024-05-31T19:26:44,668 already explicitly excluding 'multiqc.modules.odgi' via 2024-05-31T19:26:44,669 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,670 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,670 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,671 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,672 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,674 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,674 even if it does not contain any `.py` files. 2024-05-31T19:26:44,675 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,676 directory, all directories are treated like packages. 2024-05-31T19:26:44,676 ******************************************************************************** 2024-05-31T19:26:44,677 !! 2024-05-31T19:26:44,678 check.warn(importable) 2024-05-31T19:26:44,679 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.optitype' is absent from the `packages` configuration. 2024-05-31T19:26:44,679 !! 2024-05-31T19:26:44,681 ******************************************************************************** 2024-05-31T19:26:44,681 ############################ 2024-05-31T19:26:44,681 # Package would be ignored # 2024-05-31T19:26:44,682 ############################ 2024-05-31T19:26:44,682 Python recognizes 'multiqc.modules.optitype' as an importable package[^1], 2024-05-31T19:26:44,683 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,683 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,684 package, please make sure that 'multiqc.modules.optitype' is explicitly added 2024-05-31T19:26:44,684 to the `packages` configuration field. 2024-05-31T19:26:44,685 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,686 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,686 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,687 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,688 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,689 If you don't want 'multiqc.modules.optitype' to be distributed and are 2024-05-31T19:26:44,690 already explicitly excluding 'multiqc.modules.optitype' via 2024-05-31T19:26:44,690 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,691 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,691 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,692 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,693 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,695 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,696 even if it does not contain any `.py` files. 2024-05-31T19:26:44,696 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,697 directory, all directories are treated like packages. 2024-05-31T19:26:44,697 ******************************************************************************** 2024-05-31T19:26:44,698 !! 2024-05-31T19:26:44,699 check.warn(importable) 2024-05-31T19:26:44,700 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pangolin' is absent from the `packages` configuration. 2024-05-31T19:26:44,700 !! 2024-05-31T19:26:44,701 ******************************************************************************** 2024-05-31T19:26:44,702 ############################ 2024-05-31T19:26:44,702 # Package would be ignored # 2024-05-31T19:26:44,703 ############################ 2024-05-31T19:26:44,704 Python recognizes 'multiqc.modules.pangolin' as an importable package[^1], 2024-05-31T19:26:44,704 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,706 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,706 package, please make sure that 'multiqc.modules.pangolin' is explicitly added 2024-05-31T19:26:44,707 to the `packages` configuration field. 2024-05-31T19:26:44,708 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,709 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,709 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,711 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,711 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,712 If you don't want 'multiqc.modules.pangolin' to be distributed and are 2024-05-31T19:26:44,713 already explicitly excluding 'multiqc.modules.pangolin' via 2024-05-31T19:26:44,713 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,714 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,714 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,715 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,716 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,717 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,718 even if it does not contain any `.py` files. 2024-05-31T19:26:44,718 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,719 directory, all directories are treated like packages. 2024-05-31T19:26:44,719 ******************************************************************************** 2024-05-31T19:26:44,720 !! 2024-05-31T19:26:44,721 check.warn(importable) 2024-05-31T19:26:44,721 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pbmarkdup' is absent from the `packages` configuration. 2024-05-31T19:26:44,722 !! 2024-05-31T19:26:44,723 ******************************************************************************** 2024-05-31T19:26:44,723 ############################ 2024-05-31T19:26:44,724 # Package would be ignored # 2024-05-31T19:26:44,724 ############################ 2024-05-31T19:26:44,725 Python recognizes 'multiqc.modules.pbmarkdup' as an importable package[^1], 2024-05-31T19:26:44,725 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,726 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,727 package, please make sure that 'multiqc.modules.pbmarkdup' is explicitly added 2024-05-31T19:26:44,728 to the `packages` configuration field. 2024-05-31T19:26:44,729 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,729 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,730 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,731 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,732 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,733 If you don't want 'multiqc.modules.pbmarkdup' to be distributed and are 2024-05-31T19:26:44,733 already explicitly excluding 'multiqc.modules.pbmarkdup' via 2024-05-31T19:26:44,734 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,734 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,735 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,736 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,737 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,739 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,740 even if it does not contain any `.py` files. 2024-05-31T19:26:44,740 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,741 directory, all directories are treated like packages. 2024-05-31T19:26:44,742 ******************************************************************************** 2024-05-31T19:26:44,743 !! 2024-05-31T19:26:44,743 check.warn(importable) 2024-05-31T19:26:44,744 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.peddy' is absent from the `packages` configuration. 2024-05-31T19:26:44,744 !! 2024-05-31T19:26:44,745 ******************************************************************************** 2024-05-31T19:26:44,745 ############################ 2024-05-31T19:26:44,746 # Package would be ignored # 2024-05-31T19:26:44,746 ############################ 2024-05-31T19:26:44,747 Python recognizes 'multiqc.modules.peddy' as an importable package[^1], 2024-05-31T19:26:44,747 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,748 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,749 package, please make sure that 'multiqc.modules.peddy' is explicitly added 2024-05-31T19:26:44,749 to the `packages` configuration field. 2024-05-31T19:26:44,750 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,751 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,751 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,752 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,753 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,754 If you don't want 'multiqc.modules.peddy' to be distributed and are 2024-05-31T19:26:44,755 already explicitly excluding 'multiqc.modules.peddy' via 2024-05-31T19:26:44,755 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,756 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,756 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,757 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,758 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,760 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,761 even if it does not contain any `.py` files. 2024-05-31T19:26:44,761 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,762 directory, all directories are treated like packages. 2024-05-31T19:26:44,762 ******************************************************************************** 2024-05-31T19:26:44,763 !! 2024-05-31T19:26:44,764 check.warn(importable) 2024-05-31T19:26:44,765 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.phantompeakqualtools' is absent from the `packages` configuration. 2024-05-31T19:26:44,765 !! 2024-05-31T19:26:44,766 ******************************************************************************** 2024-05-31T19:26:44,767 ############################ 2024-05-31T19:26:44,767 # Package would be ignored # 2024-05-31T19:26:44,768 ############################ 2024-05-31T19:26:44,769 Python recognizes 'multiqc.modules.phantompeakqualtools' as an importable package[^1], 2024-05-31T19:26:44,769 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,770 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,771 package, please make sure that 'multiqc.modules.phantompeakqualtools' is explicitly added 2024-05-31T19:26:44,772 to the `packages` configuration field. 2024-05-31T19:26:44,773 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,774 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,774 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,775 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,776 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,777 If you don't want 'multiqc.modules.phantompeakqualtools' to be distributed and are 2024-05-31T19:26:44,778 already explicitly excluding 'multiqc.modules.phantompeakqualtools' via 2024-05-31T19:26:44,778 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,779 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,779 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,780 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,781 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,782 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,783 even if it does not contain any `.py` files. 2024-05-31T19:26:44,783 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,784 directory, all directories are treated like packages. 2024-05-31T19:26:44,784 ******************************************************************************** 2024-05-31T19:26:44,785 !! 2024-05-31T19:26:44,786 check.warn(importable) 2024-05-31T19:26:44,787 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.picard' is absent from the `packages` configuration. 2024-05-31T19:26:44,787 !! 2024-05-31T19:26:44,789 ******************************************************************************** 2024-05-31T19:26:44,789 ############################ 2024-05-31T19:26:44,790 # Package would be ignored # 2024-05-31T19:26:44,790 ############################ 2024-05-31T19:26:44,791 Python recognizes 'multiqc.modules.picard' as an importable package[^1], 2024-05-31T19:26:44,792 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,793 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,793 package, please make sure that 'multiqc.modules.picard' is explicitly added 2024-05-31T19:26:44,794 to the `packages` configuration field. 2024-05-31T19:26:44,795 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,795 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,796 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,801 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,802 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,804 If you don't want 'multiqc.modules.picard' to be distributed and are 2024-05-31T19:26:44,804 already explicitly excluding 'multiqc.modules.picard' via 2024-05-31T19:26:44,805 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,805 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,806 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,808 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,809 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,810 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,810 even if it does not contain any `.py` files. 2024-05-31T19:26:44,811 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,811 directory, all directories are treated like packages. 2024-05-31T19:26:44,812 ******************************************************************************** 2024-05-31T19:26:44,812 !! 2024-05-31T19:26:44,813 check.warn(importable) 2024-05-31T19:26:44,813 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.porechop' is absent from the `packages` configuration. 2024-05-31T19:26:44,814 !! 2024-05-31T19:26:44,815 ******************************************************************************** 2024-05-31T19:26:44,815 ############################ 2024-05-31T19:26:44,816 # Package would be ignored # 2024-05-31T19:26:44,816 ############################ 2024-05-31T19:26:44,817 Python recognizes 'multiqc.modules.porechop' as an importable package[^1], 2024-05-31T19:26:44,817 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,818 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,819 package, please make sure that 'multiqc.modules.porechop' is explicitly added 2024-05-31T19:26:44,819 to the `packages` configuration field. 2024-05-31T19:26:44,820 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,821 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,822 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,823 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,824 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,826 If you don't want 'multiqc.modules.porechop' to be distributed and are 2024-05-31T19:26:44,826 already explicitly excluding 'multiqc.modules.porechop' via 2024-05-31T19:26:44,827 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,827 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,828 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,829 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,831 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,832 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,833 even if it does not contain any `.py` files. 2024-05-31T19:26:44,834 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,834 directory, all directories are treated like packages. 2024-05-31T19:26:44,835 ******************************************************************************** 2024-05-31T19:26:44,836 !! 2024-05-31T19:26:44,837 check.warn(importable) 2024-05-31T19:26:44,838 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.preseq' is absent from the `packages` configuration. 2024-05-31T19:26:44,838 !! 2024-05-31T19:26:44,839 ******************************************************************************** 2024-05-31T19:26:44,840 ############################ 2024-05-31T19:26:44,841 # Package would be ignored # 2024-05-31T19:26:44,842 ############################ 2024-05-31T19:26:44,842 Python recognizes 'multiqc.modules.preseq' as an importable package[^1], 2024-05-31T19:26:44,842 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,843 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,844 package, please make sure that 'multiqc.modules.preseq' is explicitly added 2024-05-31T19:26:44,844 to the `packages` configuration field. 2024-05-31T19:26:44,845 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,846 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,846 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,847 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,848 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,849 If you don't want 'multiqc.modules.preseq' to be distributed and are 2024-05-31T19:26:44,849 already explicitly excluding 'multiqc.modules.preseq' via 2024-05-31T19:26:44,850 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,850 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,851 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,852 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,853 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,855 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,856 even if it does not contain any `.py` files. 2024-05-31T19:26:44,856 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,857 directory, all directories are treated like packages. 2024-05-31T19:26:44,857 ******************************************************************************** 2024-05-31T19:26:44,859 !! 2024-05-31T19:26:44,859 check.warn(importable) 2024-05-31T19:26:44,860 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.prinseqplusplus' is absent from the `packages` configuration. 2024-05-31T19:26:44,861 !! 2024-05-31T19:26:44,862 ******************************************************************************** 2024-05-31T19:26:44,863 ############################ 2024-05-31T19:26:44,863 # Package would be ignored # 2024-05-31T19:26:44,864 ############################ 2024-05-31T19:26:44,864 Python recognizes 'multiqc.modules.prinseqplusplus' as an importable package[^1], 2024-05-31T19:26:44,865 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,866 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,866 package, please make sure that 'multiqc.modules.prinseqplusplus' is explicitly added 2024-05-31T19:26:44,867 to the `packages` configuration field. 2024-05-31T19:26:44,868 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,869 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,869 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,871 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,872 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,873 If you don't want 'multiqc.modules.prinseqplusplus' to be distributed and are 2024-05-31T19:26:44,874 already explicitly excluding 'multiqc.modules.prinseqplusplus' via 2024-05-31T19:26:44,874 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,875 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,875 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,876 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,877 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,878 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,878 even if it does not contain any `.py` files. 2024-05-31T19:26:44,879 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,880 directory, all directories are treated like packages. 2024-05-31T19:26:44,880 ******************************************************************************** 2024-05-31T19:26:44,881 !! 2024-05-31T19:26:44,882 check.warn(importable) 2024-05-31T19:26:44,883 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.prokka' is absent from the `packages` configuration. 2024-05-31T19:26:44,883 !! 2024-05-31T19:26:44,884 ******************************************************************************** 2024-05-31T19:26:44,885 ############################ 2024-05-31T19:26:44,885 # Package would be ignored # 2024-05-31T19:26:44,886 ############################ 2024-05-31T19:26:44,887 Python recognizes 'multiqc.modules.prokka' as an importable package[^1], 2024-05-31T19:26:44,887 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,888 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,889 package, please make sure that 'multiqc.modules.prokka' is explicitly added 2024-05-31T19:26:44,890 to the `packages` configuration field. 2024-05-31T19:26:44,891 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,892 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,892 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,893 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,895 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,896 If you don't want 'multiqc.modules.prokka' to be distributed and are 2024-05-31T19:26:44,896 already explicitly excluding 'multiqc.modules.prokka' via 2024-05-31T19:26:44,897 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,897 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,898 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,899 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,900 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,902 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,903 even if it does not contain any `.py` files. 2024-05-31T19:26:44,903 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,904 directory, all directories are treated like packages. 2024-05-31T19:26:44,905 ******************************************************************************** 2024-05-31T19:26:44,906 !! 2024-05-31T19:26:44,906 check.warn(importable) 2024-05-31T19:26:44,907 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.purple' is absent from the `packages` configuration. 2024-05-31T19:26:44,907 !! 2024-05-31T19:26:44,908 ******************************************************************************** 2024-05-31T19:26:44,909 ############################ 2024-05-31T19:26:44,909 # Package would be ignored # 2024-05-31T19:26:44,910 ############################ 2024-05-31T19:26:44,910 Python recognizes 'multiqc.modules.purple' as an importable package[^1], 2024-05-31T19:26:44,910 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,911 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,912 package, please make sure that 'multiqc.modules.purple' is explicitly added 2024-05-31T19:26:44,912 to the `packages` configuration field. 2024-05-31T19:26:44,913 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,913 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,914 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,915 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,916 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,917 If you don't want 'multiqc.modules.purple' to be distributed and are 2024-05-31T19:26:44,918 already explicitly excluding 'multiqc.modules.purple' via 2024-05-31T19:26:44,918 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,919 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,919 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,920 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,922 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,923 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,924 even if it does not contain any `.py` files. 2024-05-31T19:26:44,925 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,925 directory, all directories are treated like packages. 2024-05-31T19:26:44,926 ******************************************************************************** 2024-05-31T19:26:44,927 !! 2024-05-31T19:26:44,928 check.warn(importable) 2024-05-31T19:26:44,928 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pychopper' is absent from the `packages` configuration. 2024-05-31T19:26:44,929 !! 2024-05-31T19:26:44,930 ******************************************************************************** 2024-05-31T19:26:44,930 ############################ 2024-05-31T19:26:44,931 # Package would be ignored # 2024-05-31T19:26:44,932 ############################ 2024-05-31T19:26:44,932 Python recognizes 'multiqc.modules.pychopper' as an importable package[^1], 2024-05-31T19:26:44,933 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,934 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,935 package, please make sure that 'multiqc.modules.pychopper' is explicitly added 2024-05-31T19:26:44,935 to the `packages` configuration field. 2024-05-31T19:26:44,937 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,937 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,938 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,939 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,940 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,941 If you don't want 'multiqc.modules.pychopper' to be distributed and are 2024-05-31T19:26:44,941 already explicitly excluding 'multiqc.modules.pychopper' via 2024-05-31T19:26:44,942 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,942 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,943 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,943 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,944 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,946 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,946 even if it does not contain any `.py` files. 2024-05-31T19:26:44,947 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,947 directory, all directories are treated like packages. 2024-05-31T19:26:44,948 ******************************************************************************** 2024-05-31T19:26:44,948 !! 2024-05-31T19:26:44,949 check.warn(importable) 2024-05-31T19:26:44,950 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.pycoqc' is absent from the `packages` configuration. 2024-05-31T19:26:44,950 !! 2024-05-31T19:26:44,951 ******************************************************************************** 2024-05-31T19:26:44,952 ############################ 2024-05-31T19:26:44,952 # Package would be ignored # 2024-05-31T19:26:44,953 ############################ 2024-05-31T19:26:44,954 Python recognizes 'multiqc.modules.pycoqc' as an importable package[^1], 2024-05-31T19:26:44,954 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,955 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,956 package, please make sure that 'multiqc.modules.pycoqc' is explicitly added 2024-05-31T19:26:44,956 to the `packages` configuration field. 2024-05-31T19:26:44,958 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,958 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,959 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,960 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,961 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,962 If you don't want 'multiqc.modules.pycoqc' to be distributed and are 2024-05-31T19:26:44,963 already explicitly excluding 'multiqc.modules.pycoqc' via 2024-05-31T19:26:44,963 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,964 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,964 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,966 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,967 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,969 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,970 even if it does not contain any `.py` files. 2024-05-31T19:26:44,970 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,970 directory, all directories are treated like packages. 2024-05-31T19:26:44,971 ******************************************************************************** 2024-05-31T19:26:44,972 !! 2024-05-31T19:26:44,972 check.warn(importable) 2024-05-31T19:26:44,973 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qc3C' is absent from the `packages` configuration. 2024-05-31T19:26:44,973 !! 2024-05-31T19:26:44,974 ******************************************************************************** 2024-05-31T19:26:44,975 ############################ 2024-05-31T19:26:44,975 # Package would be ignored # 2024-05-31T19:26:44,976 ############################ 2024-05-31T19:26:44,976 Python recognizes 'multiqc.modules.qc3C' as an importable package[^1], 2024-05-31T19:26:44,976 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:44,977 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:44,978 package, please make sure that 'multiqc.modules.qc3C' is explicitly added 2024-05-31T19:26:44,978 to the `packages` configuration field. 2024-05-31T19:26:44,979 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:44,980 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:44,980 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:44,982 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:44,983 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:44,984 If you don't want 'multiqc.modules.qc3C' to be distributed and are 2024-05-31T19:26:44,985 already explicitly excluding 'multiqc.modules.qc3C' via 2024-05-31T19:26:44,985 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:44,986 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:44,986 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:44,987 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:44,989 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:44,990 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:44,991 even if it does not contain any `.py` files. 2024-05-31T19:26:44,992 On the other hand, currently there is no concept of package data 2024-05-31T19:26:44,992 directory, all directories are treated like packages. 2024-05-31T19:26:44,993 ******************************************************************************** 2024-05-31T19:26:44,994 !! 2024-05-31T19:26:44,995 check.warn(importable) 2024-05-31T19:26:44,995 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qorts' is absent from the `packages` configuration. 2024-05-31T19:26:44,996 !! 2024-05-31T19:26:44,997 ******************************************************************************** 2024-05-31T19:26:44,998 ############################ 2024-05-31T19:26:44,998 # Package would be ignored # 2024-05-31T19:26:44,999 ############################ 2024-05-31T19:26:45,000 Python recognizes 'multiqc.modules.qorts' as an importable package[^1], 2024-05-31T19:26:45,001 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,002 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,002 package, please make sure that 'multiqc.modules.qorts' is explicitly added 2024-05-31T19:26:45,003 to the `packages` configuration field. 2024-05-31T19:26:45,004 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,004 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,005 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,006 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,007 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,008 If you don't want 'multiqc.modules.qorts' to be distributed and are 2024-05-31T19:26:45,008 already explicitly excluding 'multiqc.modules.qorts' via 2024-05-31T19:26:45,008 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,009 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,009 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,010 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,011 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,013 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,013 even if it does not contain any `.py` files. 2024-05-31T19:26:45,014 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,014 directory, all directories are treated like packages. 2024-05-31T19:26:45,015 ******************************************************************************** 2024-05-31T19:26:45,016 !! 2024-05-31T19:26:45,017 check.warn(importable) 2024-05-31T19:26:45,017 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.qualimap' is absent from the `packages` configuration. 2024-05-31T19:26:45,018 !! 2024-05-31T19:26:45,019 ******************************************************************************** 2024-05-31T19:26:45,020 ############################ 2024-05-31T19:26:45,020 # Package would be ignored # 2024-05-31T19:26:45,021 ############################ 2024-05-31T19:26:45,022 Python recognizes 'multiqc.modules.qualimap' as an importable package[^1], 2024-05-31T19:26:45,022 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,023 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,024 package, please make sure that 'multiqc.modules.qualimap' is explicitly added 2024-05-31T19:26:45,024 to the `packages` configuration field. 2024-05-31T19:26:45,025 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,026 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,026 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,027 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,028 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,030 If you don't want 'multiqc.modules.qualimap' to be distributed and are 2024-05-31T19:26:45,030 already explicitly excluding 'multiqc.modules.qualimap' via 2024-05-31T19:26:45,031 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,031 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,032 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,033 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,034 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,035 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,036 even if it does not contain any `.py` files. 2024-05-31T19:26:45,036 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,036 directory, all directories are treated like packages. 2024-05-31T19:26:45,037 ******************************************************************************** 2024-05-31T19:26:45,038 !! 2024-05-31T19:26:45,038 check.warn(importable) 2024-05-31T19:26:45,039 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.quast' is absent from the `packages` configuration. 2024-05-31T19:26:45,039 !! 2024-05-31T19:26:45,040 ******************************************************************************** 2024-05-31T19:26:45,040 ############################ 2024-05-31T19:26:45,041 # Package would be ignored # 2024-05-31T19:26:45,041 ############################ 2024-05-31T19:26:45,042 Python recognizes 'multiqc.modules.quast' as an importable package[^1], 2024-05-31T19:26:45,042 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,044 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,044 package, please make sure that 'multiqc.modules.quast' is explicitly added 2024-05-31T19:26:45,045 to the `packages` configuration field. 2024-05-31T19:26:45,046 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,047 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,047 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,049 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,050 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,051 If you don't want 'multiqc.modules.quast' to be distributed and are 2024-05-31T19:26:45,052 already explicitly excluding 'multiqc.modules.quast' via 2024-05-31T19:26:45,053 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,054 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,054 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,056 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,057 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,059 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,059 even if it does not contain any `.py` files. 2024-05-31T19:26:45,060 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,060 directory, all directories are treated like packages. 2024-05-31T19:26:45,061 ******************************************************************************** 2024-05-31T19:26:45,062 !! 2024-05-31T19:26:45,063 check.warn(importable) 2024-05-31T19:26:45,063 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rna_seqc' is absent from the `packages` configuration. 2024-05-31T19:26:45,064 !! 2024-05-31T19:26:45,066 ******************************************************************************** 2024-05-31T19:26:45,067 ############################ 2024-05-31T19:26:45,067 # Package would be ignored # 2024-05-31T19:26:45,067 ############################ 2024-05-31T19:26:45,068 Python recognizes 'multiqc.modules.rna_seqc' as an importable package[^1], 2024-05-31T19:26:45,068 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,069 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,070 package, please make sure that 'multiqc.modules.rna_seqc' is explicitly added 2024-05-31T19:26:45,070 to the `packages` configuration field. 2024-05-31T19:26:45,071 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,071 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,072 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,073 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,074 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,075 If you don't want 'multiqc.modules.rna_seqc' to be distributed and are 2024-05-31T19:26:45,075 already explicitly excluding 'multiqc.modules.rna_seqc' via 2024-05-31T19:26:45,076 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,076 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,077 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,078 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,079 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,081 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,081 even if it does not contain any `.py` files. 2024-05-31T19:26:45,082 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,083 directory, all directories are treated like packages. 2024-05-31T19:26:45,083 ******************************************************************************** 2024-05-31T19:26:45,085 !! 2024-05-31T19:26:45,085 check.warn(importable) 2024-05-31T19:26:45,086 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rockhopper' is absent from the `packages` configuration. 2024-05-31T19:26:45,087 !! 2024-05-31T19:26:45,088 ******************************************************************************** 2024-05-31T19:26:45,088 ############################ 2024-05-31T19:26:45,089 # Package would be ignored # 2024-05-31T19:26:45,090 ############################ 2024-05-31T19:26:45,090 Python recognizes 'multiqc.modules.rockhopper' as an importable package[^1], 2024-05-31T19:26:45,091 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,092 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,092 package, please make sure that 'multiqc.modules.rockhopper' is explicitly added 2024-05-31T19:26:45,093 to the `packages` configuration field. 2024-05-31T19:26:45,094 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,095 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,095 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,097 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,098 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,099 If you don't want 'multiqc.modules.rockhopper' to be distributed and are 2024-05-31T19:26:45,099 already explicitly excluding 'multiqc.modules.rockhopper' via 2024-05-31T19:26:45,100 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,100 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,100 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,101 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,102 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,103 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,104 even if it does not contain any `.py` files. 2024-05-31T19:26:45,104 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,105 directory, all directories are treated like packages. 2024-05-31T19:26:45,105 ******************************************************************************** 2024-05-31T19:26:45,106 !! 2024-05-31T19:26:45,107 check.warn(importable) 2024-05-31T19:26:45,107 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rsem' is absent from the `packages` configuration. 2024-05-31T19:26:45,108 !! 2024-05-31T19:26:45,109 ******************************************************************************** 2024-05-31T19:26:45,109 ############################ 2024-05-31T19:26:45,110 # Package would be ignored # 2024-05-31T19:26:45,110 ############################ 2024-05-31T19:26:45,111 Python recognizes 'multiqc.modules.rsem' as an importable package[^1], 2024-05-31T19:26:45,112 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,113 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,113 package, please make sure that 'multiqc.modules.rsem' is explicitly added 2024-05-31T19:26:45,114 to the `packages` configuration field. 2024-05-31T19:26:45,115 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,115 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,116 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,117 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,118 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,119 If you don't want 'multiqc.modules.rsem' to be distributed and are 2024-05-31T19:26:45,120 already explicitly excluding 'multiqc.modules.rsem' via 2024-05-31T19:26:45,120 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,121 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,122 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,124 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,126 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,126 even if it does not contain any `.py` files. 2024-05-31T19:26:45,127 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,128 directory, all directories are treated like packages. 2024-05-31T19:26:45,128 ******************************************************************************** 2024-05-31T19:26:45,130 !! 2024-05-31T19:26:45,130 check.warn(importable) 2024-05-31T19:26:45,130 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rseqc' is absent from the `packages` configuration. 2024-05-31T19:26:45,131 !! 2024-05-31T19:26:45,132 ******************************************************************************** 2024-05-31T19:26:45,132 ############################ 2024-05-31T19:26:45,133 # Package would be ignored # 2024-05-31T19:26:45,133 ############################ 2024-05-31T19:26:45,134 Python recognizes 'multiqc.modules.rseqc' as an importable package[^1], 2024-05-31T19:26:45,134 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,135 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,135 package, please make sure that 'multiqc.modules.rseqc' is explicitly added 2024-05-31T19:26:45,136 to the `packages` configuration field. 2024-05-31T19:26:45,137 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,138 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,139 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,140 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,141 If you don't want 'multiqc.modules.rseqc' to be distributed and are 2024-05-31T19:26:45,142 already explicitly excluding 'multiqc.modules.rseqc' via 2024-05-31T19:26:45,143 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,143 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,144 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,146 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,147 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,149 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,149 even if it does not contain any `.py` files. 2024-05-31T19:26:45,150 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,150 directory, all directories are treated like packages. 2024-05-31T19:26:45,151 ******************************************************************************** 2024-05-31T19:26:45,152 !! 2024-05-31T19:26:45,152 check.warn(importable) 2024-05-31T19:26:45,153 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.rseqc.assets.js' is absent from the `packages` configuration. 2024-05-31T19:26:45,154 !! 2024-05-31T19:26:45,155 ******************************************************************************** 2024-05-31T19:26:45,155 ############################ 2024-05-31T19:26:45,156 # Package would be ignored # 2024-05-31T19:26:45,156 ############################ 2024-05-31T19:26:45,157 Python recognizes 'multiqc.modules.rseqc.assets.js' as an importable package[^1], 2024-05-31T19:26:45,157 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,159 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,159 package, please make sure that 'multiqc.modules.rseqc.assets.js' is explicitly added 2024-05-31T19:26:45,160 to the `packages` configuration field. 2024-05-31T19:26:45,161 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,162 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,162 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,163 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,164 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,165 If you don't want 'multiqc.modules.rseqc.assets.js' to be distributed and are 2024-05-31T19:26:45,165 already explicitly excluding 'multiqc.modules.rseqc.assets.js' via 2024-05-31T19:26:45,166 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,166 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,167 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,168 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,169 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,170 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,171 even if it does not contain any `.py` files. 2024-05-31T19:26:45,171 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,172 directory, all directories are treated like packages. 2024-05-31T19:26:45,172 ******************************************************************************** 2024-05-31T19:26:45,173 !! 2024-05-31T19:26:45,174 check.warn(importable) 2024-05-31T19:26:45,174 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.salmon' is absent from the `packages` configuration. 2024-05-31T19:26:45,175 !! 2024-05-31T19:26:45,176 ******************************************************************************** 2024-05-31T19:26:45,177 ############################ 2024-05-31T19:26:45,177 # Package would be ignored # 2024-05-31T19:26:45,178 ############################ 2024-05-31T19:26:45,178 Python recognizes 'multiqc.modules.salmon' as an importable package[^1], 2024-05-31T19:26:45,179 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,180 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,181 package, please make sure that 'multiqc.modules.salmon' is explicitly added 2024-05-31T19:26:45,181 to the `packages` configuration field. 2024-05-31T19:26:45,182 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,183 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,184 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,185 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,186 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,187 If you don't want 'multiqc.modules.salmon' to be distributed and are 2024-05-31T19:26:45,188 already explicitly excluding 'multiqc.modules.salmon' via 2024-05-31T19:26:45,188 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,189 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,189 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,191 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,192 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,194 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,194 even if it does not contain any `.py` files. 2024-05-31T19:26:45,195 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,195 directory, all directories are treated like packages. 2024-05-31T19:26:45,196 ******************************************************************************** 2024-05-31T19:26:45,196 !! 2024-05-31T19:26:45,197 check.warn(importable) 2024-05-31T19:26:45,197 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sambamba' is absent from the `packages` configuration. 2024-05-31T19:26:45,198 !! 2024-05-31T19:26:45,199 ******************************************************************************** 2024-05-31T19:26:45,199 ############################ 2024-05-31T19:26:45,200 # Package would be ignored # 2024-05-31T19:26:45,200 ############################ 2024-05-31T19:26:45,201 Python recognizes 'multiqc.modules.sambamba' as an importable package[^1], 2024-05-31T19:26:45,201 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,202 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,202 package, please make sure that 'multiqc.modules.sambamba' is explicitly added 2024-05-31T19:26:45,203 to the `packages` configuration field. 2024-05-31T19:26:45,204 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,204 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,205 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,206 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,207 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,208 If you don't want 'multiqc.modules.sambamba' to be distributed and are 2024-05-31T19:26:45,209 already explicitly excluding 'multiqc.modules.sambamba' via 2024-05-31T19:26:45,209 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,210 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,210 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,211 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,212 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,214 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,215 even if it does not contain any `.py` files. 2024-05-31T19:26:45,215 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,216 directory, all directories are treated like packages. 2024-05-31T19:26:45,216 ******************************************************************************** 2024-05-31T19:26:45,217 !! 2024-05-31T19:26:45,218 check.warn(importable) 2024-05-31T19:26:45,218 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.samblaster' is absent from the `packages` configuration. 2024-05-31T19:26:45,219 !! 2024-05-31T19:26:45,220 ******************************************************************************** 2024-05-31T19:26:45,221 ############################ 2024-05-31T19:26:45,221 # Package would be ignored # 2024-05-31T19:26:45,222 ############################ 2024-05-31T19:26:45,223 Python recognizes 'multiqc.modules.samblaster' as an importable package[^1], 2024-05-31T19:26:45,223 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,224 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,225 package, please make sure that 'multiqc.modules.samblaster' is explicitly added 2024-05-31T19:26:45,225 to the `packages` configuration field. 2024-05-31T19:26:45,226 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,226 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,227 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,228 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,229 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,230 If you don't want 'multiqc.modules.samblaster' to be distributed and are 2024-05-31T19:26:45,231 already explicitly excluding 'multiqc.modules.samblaster' via 2024-05-31T19:26:45,231 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,232 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,232 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,233 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,235 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,237 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,237 even if it does not contain any `.py` files. 2024-05-31T19:26:45,238 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,238 directory, all directories are treated like packages. 2024-05-31T19:26:45,239 ******************************************************************************** 2024-05-31T19:26:45,240 !! 2024-05-31T19:26:45,240 check.warn(importable) 2024-05-31T19:26:45,241 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.samtools' is absent from the `packages` configuration. 2024-05-31T19:26:45,242 !! 2024-05-31T19:26:45,243 ******************************************************************************** 2024-05-31T19:26:45,243 ############################ 2024-05-31T19:26:45,244 # Package would be ignored # 2024-05-31T19:26:45,244 ############################ 2024-05-31T19:26:45,245 Python recognizes 'multiqc.modules.samtools' as an importable package[^1], 2024-05-31T19:26:45,246 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,247 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,247 package, please make sure that 'multiqc.modules.samtools' is explicitly added 2024-05-31T19:26:45,248 to the `packages` configuration field. 2024-05-31T19:26:45,249 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,249 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,250 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,251 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,252 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,253 If you don't want 'multiqc.modules.samtools' to be distributed and are 2024-05-31T19:26:45,254 already explicitly excluding 'multiqc.modules.samtools' via 2024-05-31T19:26:45,254 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,255 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,255 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,256 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,257 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,258 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,259 even if it does not contain any `.py` files. 2024-05-31T19:26:45,259 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,260 directory, all directories are treated like packages. 2024-05-31T19:26:45,260 ******************************************************************************** 2024-05-31T19:26:45,261 !! 2024-05-31T19:26:45,261 check.warn(importable) 2024-05-31T19:26:45,262 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sargasso' is absent from the `packages` configuration. 2024-05-31T19:26:45,262 !! 2024-05-31T19:26:45,263 ******************************************************************************** 2024-05-31T19:26:45,264 ############################ 2024-05-31T19:26:45,264 # Package would be ignored # 2024-05-31T19:26:45,265 ############################ 2024-05-31T19:26:45,265 Python recognizes 'multiqc.modules.sargasso' as an importable package[^1], 2024-05-31T19:26:45,266 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,267 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,267 package, please make sure that 'multiqc.modules.sargasso' is explicitly added 2024-05-31T19:26:45,268 to the `packages` configuration field. 2024-05-31T19:26:45,269 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,270 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,270 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,271 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,273 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,274 If you don't want 'multiqc.modules.sargasso' to be distributed and are 2024-05-31T19:26:45,275 already explicitly excluding 'multiqc.modules.sargasso' via 2024-05-31T19:26:45,275 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,276 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,276 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,277 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,278 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,280 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,281 even if it does not contain any `.py` files. 2024-05-31T19:26:45,281 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,282 directory, all directories are treated like packages. 2024-05-31T19:26:45,282 ******************************************************************************** 2024-05-31T19:26:45,284 !! 2024-05-31T19:26:45,284 check.warn(importable) 2024-05-31T19:26:45,285 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqera_cli' is absent from the `packages` configuration. 2024-05-31T19:26:45,286 !! 2024-05-31T19:26:45,287 ******************************************************************************** 2024-05-31T19:26:45,287 ############################ 2024-05-31T19:26:45,288 # Package would be ignored # 2024-05-31T19:26:45,288 ############################ 2024-05-31T19:26:45,288 Python recognizes 'multiqc.modules.seqera_cli' as an importable package[^1], 2024-05-31T19:26:45,289 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,290 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,290 package, please make sure that 'multiqc.modules.seqera_cli' is explicitly added 2024-05-31T19:26:45,291 to the `packages` configuration field. 2024-05-31T19:26:45,292 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,292 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,293 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,294 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,295 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,296 If you don't want 'multiqc.modules.seqera_cli' to be distributed and are 2024-05-31T19:26:45,296 already explicitly excluding 'multiqc.modules.seqera_cli' via 2024-05-31T19:26:45,297 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,297 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,298 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,299 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,300 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,302 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,302 even if it does not contain any `.py` files. 2024-05-31T19:26:45,303 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,303 directory, all directories are treated like packages. 2024-05-31T19:26:45,304 ******************************************************************************** 2024-05-31T19:26:45,305 !! 2024-05-31T19:26:45,306 check.warn(importable) 2024-05-31T19:26:45,306 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sequali' is absent from the `packages` configuration. 2024-05-31T19:26:45,307 !! 2024-05-31T19:26:45,308 ******************************************************************************** 2024-05-31T19:26:45,308 ############################ 2024-05-31T19:26:45,309 # Package would be ignored # 2024-05-31T19:26:45,309 ############################ 2024-05-31T19:26:45,310 Python recognizes 'multiqc.modules.sequali' as an importable package[^1], 2024-05-31T19:26:45,311 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,312 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,312 package, please make sure that 'multiqc.modules.sequali' is explicitly added 2024-05-31T19:26:45,313 to the `packages` configuration field. 2024-05-31T19:26:45,315 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,315 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,316 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,317 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,318 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,319 If you don't want 'multiqc.modules.sequali' to be distributed and are 2024-05-31T19:26:45,320 already explicitly excluding 'multiqc.modules.sequali' via 2024-05-31T19:26:45,320 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,321 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,321 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,322 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,323 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,325 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,325 even if it does not contain any `.py` files. 2024-05-31T19:26:45,326 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,326 directory, all directories are treated like packages. 2024-05-31T19:26:45,327 ******************************************************************************** 2024-05-31T19:26:45,328 !! 2024-05-31T19:26:45,328 check.warn(importable) 2024-05-31T19:26:45,329 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqwho' is absent from the `packages` configuration. 2024-05-31T19:26:45,329 !! 2024-05-31T19:26:45,330 ******************************************************************************** 2024-05-31T19:26:45,331 ############################ 2024-05-31T19:26:45,332 # Package would be ignored # 2024-05-31T19:26:45,332 ############################ 2024-05-31T19:26:45,333 Python recognizes 'multiqc.modules.seqwho' as an importable package[^1], 2024-05-31T19:26:45,333 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,334 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,335 package, please make sure that 'multiqc.modules.seqwho' is explicitly added 2024-05-31T19:26:45,335 to the `packages` configuration field. 2024-05-31T19:26:45,336 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,337 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,338 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,339 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,340 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,341 If you don't want 'multiqc.modules.seqwho' to be distributed and are 2024-05-31T19:26:45,341 already explicitly excluding 'multiqc.modules.seqwho' via 2024-05-31T19:26:45,342 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,343 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,343 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,344 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,345 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,347 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,348 even if it does not contain any `.py` files. 2024-05-31T19:26:45,348 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,349 directory, all directories are treated like packages. 2024-05-31T19:26:45,349 ******************************************************************************** 2024-05-31T19:26:45,350 !! 2024-05-31T19:26:45,351 check.warn(importable) 2024-05-31T19:26:45,351 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.seqyclean' is absent from the `packages` configuration. 2024-05-31T19:26:45,352 !! 2024-05-31T19:26:45,352 ******************************************************************************** 2024-05-31T19:26:45,353 ############################ 2024-05-31T19:26:45,353 # Package would be ignored # 2024-05-31T19:26:45,354 ############################ 2024-05-31T19:26:45,354 Python recognizes 'multiqc.modules.seqyclean' as an importable package[^1], 2024-05-31T19:26:45,355 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,356 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,356 package, please make sure that 'multiqc.modules.seqyclean' is explicitly added 2024-05-31T19:26:45,356 to the `packages` configuration field. 2024-05-31T19:26:45,358 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,358 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,358 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,359 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,360 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,361 If you don't want 'multiqc.modules.seqyclean' to be distributed and are 2024-05-31T19:26:45,361 already explicitly excluding 'multiqc.modules.seqyclean' via 2024-05-31T19:26:45,362 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,362 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,362 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,363 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,364 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,365 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,366 even if it does not contain any `.py` files. 2024-05-31T19:26:45,366 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,366 directory, all directories are treated like packages. 2024-05-31T19:26:45,367 ******************************************************************************** 2024-05-31T19:26:45,368 !! 2024-05-31T19:26:45,368 check.warn(importable) 2024-05-31T19:26:45,368 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sexdeterrmine' is absent from the `packages` configuration. 2024-05-31T19:26:45,369 !! 2024-05-31T19:26:45,370 ******************************************************************************** 2024-05-31T19:26:45,370 ############################ 2024-05-31T19:26:45,370 # Package would be ignored # 2024-05-31T19:26:45,371 ############################ 2024-05-31T19:26:45,371 Python recognizes 'multiqc.modules.sexdeterrmine' as an importable package[^1], 2024-05-31T19:26:45,372 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,373 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,373 package, please make sure that 'multiqc.modules.sexdeterrmine' is explicitly added 2024-05-31T19:26:45,374 to the `packages` configuration field. 2024-05-31T19:26:45,374 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,375 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,375 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,376 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,376 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,377 If you don't want 'multiqc.modules.sexdeterrmine' to be distributed and are 2024-05-31T19:26:45,377 already explicitly excluding 'multiqc.modules.sexdeterrmine' via 2024-05-31T19:26:45,378 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,378 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,378 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,379 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,380 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,381 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,381 even if it does not contain any `.py` files. 2024-05-31T19:26:45,382 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,382 directory, all directories are treated like packages. 2024-05-31T19:26:45,383 ******************************************************************************** 2024-05-31T19:26:45,383 !! 2024-05-31T19:26:45,384 check.warn(importable) 2024-05-31T19:26:45,384 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sickle' is absent from the `packages` configuration. 2024-05-31T19:26:45,385 !! 2024-05-31T19:26:45,385 ******************************************************************************** 2024-05-31T19:26:45,386 ############################ 2024-05-31T19:26:45,386 # Package would be ignored # 2024-05-31T19:26:45,387 ############################ 2024-05-31T19:26:45,387 Python recognizes 'multiqc.modules.sickle' as an importable package[^1], 2024-05-31T19:26:45,388 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,389 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,389 package, please make sure that 'multiqc.modules.sickle' is explicitly added 2024-05-31T19:26:45,390 to the `packages` configuration field. 2024-05-31T19:26:45,391 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,391 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,392 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,393 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,394 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,395 If you don't want 'multiqc.modules.sickle' to be distributed and are 2024-05-31T19:26:45,395 already explicitly excluding 'multiqc.modules.sickle' via 2024-05-31T19:26:45,396 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,396 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,396 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,397 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,398 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,399 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,399 even if it does not contain any `.py` files. 2024-05-31T19:26:45,400 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,400 directory, all directories are treated like packages. 2024-05-31T19:26:45,400 ******************************************************************************** 2024-05-31T19:26:45,401 !! 2024-05-31T19:26:45,401 check.warn(importable) 2024-05-31T19:26:45,402 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.skewer' is absent from the `packages` configuration. 2024-05-31T19:26:45,402 !! 2024-05-31T19:26:45,403 ******************************************************************************** 2024-05-31T19:26:45,403 ############################ 2024-05-31T19:26:45,403 # Package would be ignored # 2024-05-31T19:26:45,404 ############################ 2024-05-31T19:26:45,404 Python recognizes 'multiqc.modules.skewer' as an importable package[^1], 2024-05-31T19:26:45,405 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,405 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,406 package, please make sure that 'multiqc.modules.skewer' is explicitly added 2024-05-31T19:26:45,406 to the `packages` configuration field. 2024-05-31T19:26:45,407 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,408 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,408 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,409 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,410 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,411 If you don't want 'multiqc.modules.skewer' to be distributed and are 2024-05-31T19:26:45,411 already explicitly excluding 'multiqc.modules.skewer' via 2024-05-31T19:26:45,412 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,412 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,413 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,414 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,415 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,416 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,416 even if it does not contain any `.py` files. 2024-05-31T19:26:45,417 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,417 directory, all directories are treated like packages. 2024-05-31T19:26:45,418 ******************************************************************************** 2024-05-31T19:26:45,419 !! 2024-05-31T19:26:45,419 check.warn(importable) 2024-05-31T19:26:45,420 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.slamdunk' is absent from the `packages` configuration. 2024-05-31T19:26:45,420 !! 2024-05-31T19:26:45,421 ******************************************************************************** 2024-05-31T19:26:45,421 ############################ 2024-05-31T19:26:45,422 # Package would be ignored # 2024-05-31T19:26:45,422 ############################ 2024-05-31T19:26:45,422 Python recognizes 'multiqc.modules.slamdunk' as an importable package[^1], 2024-05-31T19:26:45,423 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,424 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,424 package, please make sure that 'multiqc.modules.slamdunk' is explicitly added 2024-05-31T19:26:45,424 to the `packages` configuration field. 2024-05-31T19:26:45,425 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,425 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,426 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,426 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,427 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,428 If you don't want 'multiqc.modules.slamdunk' to be distributed and are 2024-05-31T19:26:45,428 already explicitly excluding 'multiqc.modules.slamdunk' via 2024-05-31T19:26:45,429 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,429 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,430 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,430 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,431 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,433 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,433 even if it does not contain any `.py` files. 2024-05-31T19:26:45,434 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,434 directory, all directories are treated like packages. 2024-05-31T19:26:45,435 ******************************************************************************** 2024-05-31T19:26:45,435 !! 2024-05-31T19:26:45,436 check.warn(importable) 2024-05-31T19:26:45,436 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snippy' is absent from the `packages` configuration. 2024-05-31T19:26:45,437 !! 2024-05-31T19:26:45,438 ******************************************************************************** 2024-05-31T19:26:45,438 ############################ 2024-05-31T19:26:45,439 # Package would be ignored # 2024-05-31T19:26:45,439 ############################ 2024-05-31T19:26:45,440 Python recognizes 'multiqc.modules.snippy' as an importable package[^1], 2024-05-31T19:26:45,440 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,441 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,442 package, please make sure that 'multiqc.modules.snippy' is explicitly added 2024-05-31T19:26:45,442 to the `packages` configuration field. 2024-05-31T19:26:45,443 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,443 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,444 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,445 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,446 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,447 If you don't want 'multiqc.modules.snippy' to be distributed and are 2024-05-31T19:26:45,447 already explicitly excluding 'multiqc.modules.snippy' via 2024-05-31T19:26:45,448 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,448 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,448 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,449 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,450 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,451 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,451 even if it does not contain any `.py` files. 2024-05-31T19:26:45,451 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,452 directory, all directories are treated like packages. 2024-05-31T19:26:45,452 ******************************************************************************** 2024-05-31T19:26:45,453 !! 2024-05-31T19:26:45,453 check.warn(importable) 2024-05-31T19:26:45,453 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snpeff' is absent from the `packages` configuration. 2024-05-31T19:26:45,454 !! 2024-05-31T19:26:45,455 ******************************************************************************** 2024-05-31T19:26:45,455 ############################ 2024-05-31T19:26:45,456 # Package would be ignored # 2024-05-31T19:26:45,456 ############################ 2024-05-31T19:26:45,457 Python recognizes 'multiqc.modules.snpeff' as an importable package[^1], 2024-05-31T19:26:45,457 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,458 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,459 package, please make sure that 'multiqc.modules.snpeff' is explicitly added 2024-05-31T19:26:45,459 to the `packages` configuration field. 2024-05-31T19:26:45,460 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,460 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,461 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,462 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,463 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,464 If you don't want 'multiqc.modules.snpeff' to be distributed and are 2024-05-31T19:26:45,464 already explicitly excluding 'multiqc.modules.snpeff' via 2024-05-31T19:26:45,465 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,465 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,466 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,466 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,467 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,469 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,469 even if it does not contain any `.py` files. 2024-05-31T19:26:45,470 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,470 directory, all directories are treated like packages. 2024-05-31T19:26:45,471 ******************************************************************************** 2024-05-31T19:26:45,472 !! 2024-05-31T19:26:45,472 check.warn(importable) 2024-05-31T19:26:45,472 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.snpsplit' is absent from the `packages` configuration. 2024-05-31T19:26:45,472 !! 2024-05-31T19:26:45,473 ******************************************************************************** 2024-05-31T19:26:45,473 ############################ 2024-05-31T19:26:45,474 # Package would be ignored # 2024-05-31T19:26:45,474 ############################ 2024-05-31T19:26:45,475 Python recognizes 'multiqc.modules.snpsplit' as an importable package[^1], 2024-05-31T19:26:45,475 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,476 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,476 package, please make sure that 'multiqc.modules.snpsplit' is explicitly added 2024-05-31T19:26:45,476 to the `packages` configuration field. 2024-05-31T19:26:45,477 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,478 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,478 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,479 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,480 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,481 If you don't want 'multiqc.modules.snpsplit' to be distributed and are 2024-05-31T19:26:45,481 already explicitly excluding 'multiqc.modules.snpsplit' via 2024-05-31T19:26:45,482 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,482 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,483 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,484 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,484 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,486 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,486 even if it does not contain any `.py` files. 2024-05-31T19:26:45,487 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,487 directory, all directories are treated like packages. 2024-05-31T19:26:45,488 ******************************************************************************** 2024-05-31T19:26:45,488 !! 2024-05-31T19:26:45,489 check.warn(importable) 2024-05-31T19:26:45,489 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.somalier' is absent from the `packages` configuration. 2024-05-31T19:26:45,490 !! 2024-05-31T19:26:45,491 ******************************************************************************** 2024-05-31T19:26:45,491 ############################ 2024-05-31T19:26:45,492 # Package would be ignored # 2024-05-31T19:26:45,492 ############################ 2024-05-31T19:26:45,492 Python recognizes 'multiqc.modules.somalier' as an importable package[^1], 2024-05-31T19:26:45,493 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,494 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,495 package, please make sure that 'multiqc.modules.somalier' is explicitly added 2024-05-31T19:26:45,495 to the `packages` configuration field. 2024-05-31T19:26:45,497 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,497 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,498 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,498 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,499 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,499 If you don't want 'multiqc.modules.somalier' to be distributed and are 2024-05-31T19:26:45,500 already explicitly excluding 'multiqc.modules.somalier' via 2024-05-31T19:26:45,500 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,500 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,501 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,501 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,502 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,503 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,504 even if it does not contain any `.py` files. 2024-05-31T19:26:45,504 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,505 directory, all directories are treated like packages. 2024-05-31T19:26:45,505 ******************************************************************************** 2024-05-31T19:26:45,506 !! 2024-05-31T19:26:45,506 check.warn(importable) 2024-05-31T19:26:45,507 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sortmerna' is absent from the `packages` configuration. 2024-05-31T19:26:45,507 !! 2024-05-31T19:26:45,508 ******************************************************************************** 2024-05-31T19:26:45,509 ############################ 2024-05-31T19:26:45,509 # Package would be ignored # 2024-05-31T19:26:45,510 ############################ 2024-05-31T19:26:45,510 Python recognizes 'multiqc.modules.sortmerna' as an importable package[^1], 2024-05-31T19:26:45,511 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,512 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,512 package, please make sure that 'multiqc.modules.sortmerna' is explicitly added 2024-05-31T19:26:45,513 to the `packages` configuration field. 2024-05-31T19:26:45,514 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,514 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,515 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,516 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,517 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,518 If you don't want 'multiqc.modules.sortmerna' to be distributed and are 2024-05-31T19:26:45,518 already explicitly excluding 'multiqc.modules.sortmerna' via 2024-05-31T19:26:45,519 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,519 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,520 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,521 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,522 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,523 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,523 even if it does not contain any `.py` files. 2024-05-31T19:26:45,524 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,524 directory, all directories are treated like packages. 2024-05-31T19:26:45,525 ******************************************************************************** 2024-05-31T19:26:45,525 !! 2024-05-31T19:26:45,526 check.warn(importable) 2024-05-31T19:26:45,526 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.sourmash' is absent from the `packages` configuration. 2024-05-31T19:26:45,527 !! 2024-05-31T19:26:45,528 ******************************************************************************** 2024-05-31T19:26:45,528 ############################ 2024-05-31T19:26:45,529 # Package would be ignored # 2024-05-31T19:26:45,529 ############################ 2024-05-31T19:26:45,530 Python recognizes 'multiqc.modules.sourmash' as an importable package[^1], 2024-05-31T19:26:45,530 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,531 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,531 package, please make sure that 'multiqc.modules.sourmash' is explicitly added 2024-05-31T19:26:45,531 to the `packages` configuration field. 2024-05-31T19:26:45,532 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,533 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,533 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,534 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,535 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,536 If you don't want 'multiqc.modules.sourmash' to be distributed and are 2024-05-31T19:26:45,537 already explicitly excluding 'multiqc.modules.sourmash' via 2024-05-31T19:26:45,537 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,538 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,538 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,539 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,540 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,542 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,542 even if it does not contain any `.py` files. 2024-05-31T19:26:45,543 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,543 directory, all directories are treated like packages. 2024-05-31T19:26:45,543 ******************************************************************************** 2024-05-31T19:26:45,544 !! 2024-05-31T19:26:45,545 check.warn(importable) 2024-05-31T19:26:45,545 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.spaceranger' is absent from the `packages` configuration. 2024-05-31T19:26:45,546 !! 2024-05-31T19:26:45,547 ******************************************************************************** 2024-05-31T19:26:45,547 ############################ 2024-05-31T19:26:45,548 # Package would be ignored # 2024-05-31T19:26:45,548 ############################ 2024-05-31T19:26:45,549 Python recognizes 'multiqc.modules.spaceranger' as an importable package[^1], 2024-05-31T19:26:45,550 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,550 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,551 package, please make sure that 'multiqc.modules.spaceranger' is explicitly added 2024-05-31T19:26:45,551 to the `packages` configuration field. 2024-05-31T19:26:45,552 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,552 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,552 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,553 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,554 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,555 If you don't want 'multiqc.modules.spaceranger' to be distributed and are 2024-05-31T19:26:45,555 already explicitly excluding 'multiqc.modules.spaceranger' via 2024-05-31T19:26:45,556 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,556 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,556 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,557 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,558 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,559 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,560 even if it does not contain any `.py` files. 2024-05-31T19:26:45,560 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,561 directory, all directories are treated like packages. 2024-05-31T19:26:45,561 ******************************************************************************** 2024-05-31T19:26:45,562 !! 2024-05-31T19:26:45,563 check.warn(importable) 2024-05-31T19:26:45,563 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.stacks' is absent from the `packages` configuration. 2024-05-31T19:26:45,564 !! 2024-05-31T19:26:45,565 ******************************************************************************** 2024-05-31T19:26:45,566 ############################ 2024-05-31T19:26:45,566 # Package would be ignored # 2024-05-31T19:26:45,567 ############################ 2024-05-31T19:26:45,567 Python recognizes 'multiqc.modules.stacks' as an importable package[^1], 2024-05-31T19:26:45,568 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,568 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,569 package, please make sure that 'multiqc.modules.stacks' is explicitly added 2024-05-31T19:26:45,570 to the `packages` configuration field. 2024-05-31T19:26:45,571 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,571 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,572 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,573 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,574 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,575 If you don't want 'multiqc.modules.stacks' to be distributed and are 2024-05-31T19:26:45,575 already explicitly excluding 'multiqc.modules.stacks' via 2024-05-31T19:26:45,576 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,577 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,577 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,578 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,579 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,580 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,580 even if it does not contain any `.py` files. 2024-05-31T19:26:45,580 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,581 directory, all directories are treated like packages. 2024-05-31T19:26:45,581 ******************************************************************************** 2024-05-31T19:26:45,582 !! 2024-05-31T19:26:45,582 check.warn(importable) 2024-05-31T19:26:45,583 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.star' is absent from the `packages` configuration. 2024-05-31T19:26:45,583 !! 2024-05-31T19:26:45,584 ******************************************************************************** 2024-05-31T19:26:45,584 ############################ 2024-05-31T19:26:45,585 # Package would be ignored # 2024-05-31T19:26:45,585 ############################ 2024-05-31T19:26:45,585 Python recognizes 'multiqc.modules.star' as an importable package[^1], 2024-05-31T19:26:45,586 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,587 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,587 package, please make sure that 'multiqc.modules.star' is explicitly added 2024-05-31T19:26:45,588 to the `packages` configuration field. 2024-05-31T19:26:45,589 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,590 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,590 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,591 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,592 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,593 If you don't want 'multiqc.modules.star' to be distributed and are 2024-05-31T19:26:45,594 already explicitly excluding 'multiqc.modules.star' via 2024-05-31T19:26:45,594 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,595 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,595 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,596 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,597 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,598 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,599 even if it does not contain any `.py` files. 2024-05-31T19:26:45,599 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,600 directory, all directories are treated like packages. 2024-05-31T19:26:45,600 ******************************************************************************** 2024-05-31T19:26:45,602 !! 2024-05-31T19:26:45,602 check.warn(importable) 2024-05-31T19:26:45,603 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.supernova' is absent from the `packages` configuration. 2024-05-31T19:26:45,604 !! 2024-05-31T19:26:45,605 ******************************************************************************** 2024-05-31T19:26:45,605 ############################ 2024-05-31T19:26:45,605 # Package would be ignored # 2024-05-31T19:26:45,606 ############################ 2024-05-31T19:26:45,606 Python recognizes 'multiqc.modules.supernova' as an importable package[^1], 2024-05-31T19:26:45,606 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,607 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,607 package, please make sure that 'multiqc.modules.supernova' is explicitly added 2024-05-31T19:26:45,608 to the `packages` configuration field. 2024-05-31T19:26:45,608 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,609 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,609 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,610 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,610 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,611 If you don't want 'multiqc.modules.supernova' to be distributed and are 2024-05-31T19:26:45,612 already explicitly excluding 'multiqc.modules.supernova' via 2024-05-31T19:26:45,612 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,612 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,613 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,614 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,615 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,616 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,617 even if it does not contain any `.py` files. 2024-05-31T19:26:45,617 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,618 directory, all directories are treated like packages. 2024-05-31T19:26:45,618 ******************************************************************************** 2024-05-31T19:26:45,619 !! 2024-05-31T19:26:45,620 check.warn(importable) 2024-05-31T19:26:45,620 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.theta2' is absent from the `packages` configuration. 2024-05-31T19:26:45,621 !! 2024-05-31T19:26:45,622 ******************************************************************************** 2024-05-31T19:26:45,622 ############################ 2024-05-31T19:26:45,622 # Package would be ignored # 2024-05-31T19:26:45,623 ############################ 2024-05-31T19:26:45,623 Python recognizes 'multiqc.modules.theta2' as an importable package[^1], 2024-05-31T19:26:45,624 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,625 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,625 package, please make sure that 'multiqc.modules.theta2' is explicitly added 2024-05-31T19:26:45,626 to the `packages` configuration field. 2024-05-31T19:26:45,627 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,627 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,628 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,629 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,630 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,630 If you don't want 'multiqc.modules.theta2' to be distributed and are 2024-05-31T19:26:45,631 already explicitly excluding 'multiqc.modules.theta2' via 2024-05-31T19:26:45,631 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,631 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,632 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,632 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,633 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,634 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,635 even if it does not contain any `.py` files. 2024-05-31T19:26:45,635 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,635 directory, all directories are treated like packages. 2024-05-31T19:26:45,636 ******************************************************************************** 2024-05-31T19:26:45,636 !! 2024-05-31T19:26:45,637 check.warn(importable) 2024-05-31T19:26:45,637 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.tophat' is absent from the `packages` configuration. 2024-05-31T19:26:45,638 !! 2024-05-31T19:26:45,638 ******************************************************************************** 2024-05-31T19:26:45,639 ############################ 2024-05-31T19:26:45,639 # Package would be ignored # 2024-05-31T19:26:45,640 ############################ 2024-05-31T19:26:45,641 Python recognizes 'multiqc.modules.tophat' as an importable package[^1], 2024-05-31T19:26:45,641 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,642 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,643 package, please make sure that 'multiqc.modules.tophat' is explicitly added 2024-05-31T19:26:45,643 to the `packages` configuration field. 2024-05-31T19:26:45,645 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,645 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,646 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,647 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,648 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,649 If you don't want 'multiqc.modules.tophat' to be distributed and are 2024-05-31T19:26:45,649 already explicitly excluding 'multiqc.modules.tophat' via 2024-05-31T19:26:45,650 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,650 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,650 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,651 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,652 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,654 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,654 even if it does not contain any `.py` files. 2024-05-31T19:26:45,655 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,655 directory, all directories are treated like packages. 2024-05-31T19:26:45,656 ******************************************************************************** 2024-05-31T19:26:45,657 !! 2024-05-31T19:26:45,657 check.warn(importable) 2024-05-31T19:26:45,657 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.trimmomatic' is absent from the `packages` configuration. 2024-05-31T19:26:45,658 !! 2024-05-31T19:26:45,658 ******************************************************************************** 2024-05-31T19:26:45,659 ############################ 2024-05-31T19:26:45,659 # Package would be ignored # 2024-05-31T19:26:45,659 ############################ 2024-05-31T19:26:45,660 Python recognizes 'multiqc.modules.trimmomatic' as an importable package[^1], 2024-05-31T19:26:45,660 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,661 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,661 package, please make sure that 'multiqc.modules.trimmomatic' is explicitly added 2024-05-31T19:26:45,662 to the `packages` configuration field. 2024-05-31T19:26:45,662 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,663 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,663 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,664 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,665 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,666 If you don't want 'multiqc.modules.trimmomatic' to be distributed and are 2024-05-31T19:26:45,667 already explicitly excluding 'multiqc.modules.trimmomatic' via 2024-05-31T19:26:45,667 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,668 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,668 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,669 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,670 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,672 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,673 even if it does not contain any `.py` files. 2024-05-31T19:26:45,673 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,674 directory, all directories are treated like packages. 2024-05-31T19:26:45,675 ******************************************************************************** 2024-05-31T19:26:45,676 !! 2024-05-31T19:26:45,676 check.warn(importable) 2024-05-31T19:26:45,677 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.truvari' is absent from the `packages` configuration. 2024-05-31T19:26:45,677 !! 2024-05-31T19:26:45,678 ******************************************************************************** 2024-05-31T19:26:45,679 ############################ 2024-05-31T19:26:45,679 # Package would be ignored # 2024-05-31T19:26:45,680 ############################ 2024-05-31T19:26:45,680 Python recognizes 'multiqc.modules.truvari' as an importable package[^1], 2024-05-31T19:26:45,681 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,682 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,683 package, please make sure that 'multiqc.modules.truvari' is explicitly added 2024-05-31T19:26:45,683 to the `packages` configuration field. 2024-05-31T19:26:45,684 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,684 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,685 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,685 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,686 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,687 If you don't want 'multiqc.modules.truvari' to be distributed and are 2024-05-31T19:26:45,687 already explicitly excluding 'multiqc.modules.truvari' via 2024-05-31T19:26:45,687 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,688 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,688 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,689 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,689 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,691 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,691 even if it does not contain any `.py` files. 2024-05-31T19:26:45,691 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,692 directory, all directories are treated like packages. 2024-05-31T19:26:45,692 ******************************************************************************** 2024-05-31T19:26:45,693 !! 2024-05-31T19:26:45,694 check.warn(importable) 2024-05-31T19:26:45,694 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.umitools' is absent from the `packages` configuration. 2024-05-31T19:26:45,695 !! 2024-05-31T19:26:45,696 ******************************************************************************** 2024-05-31T19:26:45,696 ############################ 2024-05-31T19:26:45,697 # Package would be ignored # 2024-05-31T19:26:45,697 ############################ 2024-05-31T19:26:45,698 Python recognizes 'multiqc.modules.umitools' as an importable package[^1], 2024-05-31T19:26:45,698 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,699 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,699 package, please make sure that 'multiqc.modules.umitools' is explicitly added 2024-05-31T19:26:45,700 to the `packages` configuration field. 2024-05-31T19:26:45,701 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,701 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,702 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,703 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,703 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,704 If you don't want 'multiqc.modules.umitools' to be distributed and are 2024-05-31T19:26:45,705 already explicitly excluding 'multiqc.modules.umitools' via 2024-05-31T19:26:45,705 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,706 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,706 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,707 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,708 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,709 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,709 even if it does not contain any `.py` files. 2024-05-31T19:26:45,710 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,710 directory, all directories are treated like packages. 2024-05-31T19:26:45,710 ******************************************************************************** 2024-05-31T19:26:45,711 !! 2024-05-31T19:26:45,711 check.warn(importable) 2024-05-31T19:26:45,712 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.varscan2' is absent from the `packages` configuration. 2024-05-31T19:26:45,712 !! 2024-05-31T19:26:45,713 ******************************************************************************** 2024-05-31T19:26:45,713 ############################ 2024-05-31T19:26:45,713 # Package would be ignored # 2024-05-31T19:26:45,714 ############################ 2024-05-31T19:26:45,714 Python recognizes 'multiqc.modules.varscan2' as an importable package[^1], 2024-05-31T19:26:45,714 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,715 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,716 package, please make sure that 'multiqc.modules.varscan2' is explicitly added 2024-05-31T19:26:45,716 to the `packages` configuration field. 2024-05-31T19:26:45,717 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,718 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,718 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,719 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,720 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,721 If you don't want 'multiqc.modules.varscan2' to be distributed and are 2024-05-31T19:26:45,722 already explicitly excluding 'multiqc.modules.varscan2' via 2024-05-31T19:26:45,722 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,722 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,723 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,724 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,725 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,726 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,727 even if it does not contain any `.py` files. 2024-05-31T19:26:45,727 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,727 directory, all directories are treated like packages. 2024-05-31T19:26:45,728 ******************************************************************************** 2024-05-31T19:26:45,729 !! 2024-05-31T19:26:45,729 check.warn(importable) 2024-05-31T19:26:45,730 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.vcftools' is absent from the `packages` configuration. 2024-05-31T19:26:45,730 !! 2024-05-31T19:26:45,731 ******************************************************************************** 2024-05-31T19:26:45,732 ############################ 2024-05-31T19:26:45,733 # Package would be ignored # 2024-05-31T19:26:45,733 ############################ 2024-05-31T19:26:45,734 Python recognizes 'multiqc.modules.vcftools' as an importable package[^1], 2024-05-31T19:26:45,734 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,735 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,735 package, please make sure that 'multiqc.modules.vcftools' is explicitly added 2024-05-31T19:26:45,735 to the `packages` configuration field. 2024-05-31T19:26:45,736 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,736 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,737 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,737 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,738 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,739 If you don't want 'multiqc.modules.vcftools' to be distributed and are 2024-05-31T19:26:45,739 already explicitly excluding 'multiqc.modules.vcftools' via 2024-05-31T19:26:45,740 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,740 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,741 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,742 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,743 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,745 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,745 even if it does not contain any `.py` files. 2024-05-31T19:26:45,746 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,746 directory, all directories are treated like packages. 2024-05-31T19:26:45,747 ******************************************************************************** 2024-05-31T19:26:45,748 !! 2024-05-31T19:26:45,748 check.warn(importable) 2024-05-31T19:26:45,749 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.vep' is absent from the `packages` configuration. 2024-05-31T19:26:45,749 !! 2024-05-31T19:26:45,751 ******************************************************************************** 2024-05-31T19:26:45,751 ############################ 2024-05-31T19:26:45,752 # Package would be ignored # 2024-05-31T19:26:45,752 ############################ 2024-05-31T19:26:45,753 Python recognizes 'multiqc.modules.vep' as an importable package[^1], 2024-05-31T19:26:45,753 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,754 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,755 package, please make sure that 'multiqc.modules.vep' is explicitly added 2024-05-31T19:26:45,755 to the `packages` configuration field. 2024-05-31T19:26:45,756 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,757 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,758 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,759 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,760 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,761 If you don't want 'multiqc.modules.vep' to be distributed and are 2024-05-31T19:26:45,761 already explicitly excluding 'multiqc.modules.vep' via 2024-05-31T19:26:45,762 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,763 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,763 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,764 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,764 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,765 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,766 even if it does not contain any `.py` files. 2024-05-31T19:26:45,766 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,766 directory, all directories are treated like packages. 2024-05-31T19:26:45,767 ******************************************************************************** 2024-05-31T19:26:45,768 !! 2024-05-31T19:26:45,768 check.warn(importable) 2024-05-31T19:26:45,768 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.verifybamid' is absent from the `packages` configuration. 2024-05-31T19:26:45,769 !! 2024-05-31T19:26:45,769 ******************************************************************************** 2024-05-31T19:26:45,770 ############################ 2024-05-31T19:26:45,770 # Package would be ignored # 2024-05-31T19:26:45,771 ############################ 2024-05-31T19:26:45,771 Python recognizes 'multiqc.modules.verifybamid' as an importable package[^1], 2024-05-31T19:26:45,772 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,773 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,773 package, please make sure that 'multiqc.modules.verifybamid' is explicitly added 2024-05-31T19:26:45,774 to the `packages` configuration field. 2024-05-31T19:26:45,775 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,775 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,775 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,776 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,777 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,778 If you don't want 'multiqc.modules.verifybamid' to be distributed and are 2024-05-31T19:26:45,779 already explicitly excluding 'multiqc.modules.verifybamid' via 2024-05-31T19:26:45,779 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,780 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,780 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,781 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,782 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,783 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,784 even if it does not contain any `.py` files. 2024-05-31T19:26:45,784 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,785 directory, all directories are treated like packages. 2024-05-31T19:26:45,785 ******************************************************************************** 2024-05-31T19:26:45,787 !! 2024-05-31T19:26:45,787 check.warn(importable) 2024-05-31T19:26:45,787 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.whatshap' is absent from the `packages` configuration. 2024-05-31T19:26:45,788 !! 2024-05-31T19:26:45,788 ******************************************************************************** 2024-05-31T19:26:45,789 ############################ 2024-05-31T19:26:45,789 # Package would be ignored # 2024-05-31T19:26:45,789 ############################ 2024-05-31T19:26:45,790 Python recognizes 'multiqc.modules.whatshap' as an importable package[^1], 2024-05-31T19:26:45,790 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,791 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,791 package, please make sure that 'multiqc.modules.whatshap' is explicitly added 2024-05-31T19:26:45,792 to the `packages` configuration field. 2024-05-31T19:26:45,792 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,793 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,793 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,794 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,795 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,795 If you don't want 'multiqc.modules.whatshap' to be distributed and are 2024-05-31T19:26:45,796 already explicitly excluding 'multiqc.modules.whatshap' via 2024-05-31T19:26:45,796 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,797 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,797 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,798 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,799 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,801 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,802 even if it does not contain any `.py` files. 2024-05-31T19:26:45,802 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,803 directory, all directories are treated like packages. 2024-05-31T19:26:45,803 ******************************************************************************** 2024-05-31T19:26:45,805 !! 2024-05-31T19:26:45,805 check.warn(importable) 2024-05-31T19:26:45,806 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.xengsort' is absent from the `packages` configuration. 2024-05-31T19:26:45,806 !! 2024-05-31T19:26:45,807 ******************************************************************************** 2024-05-31T19:26:45,807 ############################ 2024-05-31T19:26:45,808 # Package would be ignored # 2024-05-31T19:26:45,808 ############################ 2024-05-31T19:26:45,809 Python recognizes 'multiqc.modules.xengsort' as an importable package[^1], 2024-05-31T19:26:45,809 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,810 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,811 package, please make sure that 'multiqc.modules.xengsort' is explicitly added 2024-05-31T19:26:45,811 to the `packages` configuration field. 2024-05-31T19:26:45,813 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,813 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,814 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,815 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,815 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,816 If you don't want 'multiqc.modules.xengsort' to be distributed and are 2024-05-31T19:26:45,816 already explicitly excluding 'multiqc.modules.xengsort' via 2024-05-31T19:26:45,817 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,817 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,818 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,819 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,819 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,821 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,822 even if it does not contain any `.py` files. 2024-05-31T19:26:45,822 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,822 directory, all directories are treated like packages. 2024-05-31T19:26:45,823 ******************************************************************************** 2024-05-31T19:26:45,824 !! 2024-05-31T19:26:45,824 check.warn(importable) 2024-05-31T19:26:45,825 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.modules.xenome' is absent from the `packages` configuration. 2024-05-31T19:26:45,825 !! 2024-05-31T19:26:45,827 ******************************************************************************** 2024-05-31T19:26:45,827 ############################ 2024-05-31T19:26:45,828 # Package would be ignored # 2024-05-31T19:26:45,828 ############################ 2024-05-31T19:26:45,829 Python recognizes 'multiqc.modules.xenome' as an importable package[^1], 2024-05-31T19:26:45,830 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,831 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,831 package, please make sure that 'multiqc.modules.xenome' is explicitly added 2024-05-31T19:26:45,832 to the `packages` configuration field. 2024-05-31T19:26:45,833 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,834 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,834 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,835 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,836 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,837 If you don't want 'multiqc.modules.xenome' to be distributed and are 2024-05-31T19:26:45,838 already explicitly excluding 'multiqc.modules.xenome' via 2024-05-31T19:26:45,838 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,839 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,840 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,841 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,842 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,843 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,844 even if it does not contain any `.py` files. 2024-05-31T19:26:45,845 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,845 directory, all directories are treated like packages. 2024-05-31T19:26:45,846 ******************************************************************************** 2024-05-31T19:26:45,846 !! 2024-05-31T19:26:45,847 check.warn(importable) 2024-05-31T19:26:45,847 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.plots' is absent from the `packages` configuration. 2024-05-31T19:26:45,848 !! 2024-05-31T19:26:45,849 ******************************************************************************** 2024-05-31T19:26:45,849 ############################ 2024-05-31T19:26:45,850 # Package would be ignored # 2024-05-31T19:26:45,850 ############################ 2024-05-31T19:26:45,851 Python recognizes 'multiqc.plots' as an importable package[^1], 2024-05-31T19:26:45,852 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,852 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,853 package, please make sure that 'multiqc.plots' is explicitly added 2024-05-31T19:26:45,853 to the `packages` configuration field. 2024-05-31T19:26:45,854 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,855 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,855 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,856 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,857 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,858 If you don't want 'multiqc.plots' to be distributed and are 2024-05-31T19:26:45,858 already explicitly excluding 'multiqc.plots' via 2024-05-31T19:26:45,859 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,859 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,860 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,861 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,862 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,863 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,864 even if it does not contain any `.py` files. 2024-05-31T19:26:45,864 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,865 directory, all directories are treated like packages. 2024-05-31T19:26:45,865 ******************************************************************************** 2024-05-31T19:26:45,866 !! 2024-05-31T19:26:45,867 check.warn(importable) 2024-05-31T19:26:45,867 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.plots.plotly' is absent from the `packages` configuration. 2024-05-31T19:26:45,868 !! 2024-05-31T19:26:45,869 ******************************************************************************** 2024-05-31T19:26:45,869 ############################ 2024-05-31T19:26:45,870 # Package would be ignored # 2024-05-31T19:26:45,870 ############################ 2024-05-31T19:26:45,871 Python recognizes 'multiqc.plots.plotly' as an importable package[^1], 2024-05-31T19:26:45,871 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,873 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,873 package, please make sure that 'multiqc.plots.plotly' is explicitly added 2024-05-31T19:26:45,874 to the `packages` configuration field. 2024-05-31T19:26:45,874 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,875 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,875 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,876 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,877 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,878 If you don't want 'multiqc.plots.plotly' to be distributed and are 2024-05-31T19:26:45,878 already explicitly excluding 'multiqc.plots.plotly' via 2024-05-31T19:26:45,879 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,879 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,880 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,881 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,882 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,883 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,883 even if it does not contain any `.py` files. 2024-05-31T19:26:45,884 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,884 directory, all directories are treated like packages. 2024-05-31T19:26:45,885 ******************************************************************************** 2024-05-31T19:26:45,886 !! 2024-05-31T19:26:45,886 check.warn(importable) 2024-05-31T19:26:45,887 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates' is absent from the `packages` configuration. 2024-05-31T19:26:45,888 !! 2024-05-31T19:26:45,888 ******************************************************************************** 2024-05-31T19:26:45,889 ############################ 2024-05-31T19:26:45,889 # Package would be ignored # 2024-05-31T19:26:45,890 ############################ 2024-05-31T19:26:45,890 Python recognizes 'multiqc.templates' as an importable package[^1], 2024-05-31T19:26:45,891 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,892 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,892 package, please make sure that 'multiqc.templates' is explicitly added 2024-05-31T19:26:45,893 to the `packages` configuration field. 2024-05-31T19:26:45,894 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,894 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,895 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,896 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,897 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,898 If you don't want 'multiqc.templates' to be distributed and are 2024-05-31T19:26:45,899 already explicitly excluding 'multiqc.templates' via 2024-05-31T19:26:45,899 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,900 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,900 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,901 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,902 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,903 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,904 even if it does not contain any `.py` files. 2024-05-31T19:26:45,904 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,905 directory, all directories are treated like packages. 2024-05-31T19:26:45,905 ******************************************************************************** 2024-05-31T19:26:45,906 !! 2024-05-31T19:26:45,906 check.warn(importable) 2024-05-31T19:26:45,907 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default' is absent from the `packages` configuration. 2024-05-31T19:26:45,907 !! 2024-05-31T19:26:45,908 ******************************************************************************** 2024-05-31T19:26:45,908 ############################ 2024-05-31T19:26:45,909 # Package would be ignored # 2024-05-31T19:26:45,910 ############################ 2024-05-31T19:26:45,910 Python recognizes 'multiqc.templates.default' as an importable package[^1], 2024-05-31T19:26:45,910 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,911 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,912 package, please make sure that 'multiqc.templates.default' is explicitly added 2024-05-31T19:26:45,912 to the `packages` configuration field. 2024-05-31T19:26:45,913 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,914 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,914 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,915 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,916 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,917 If you don't want 'multiqc.templates.default' to be distributed and are 2024-05-31T19:26:45,918 already explicitly excluding 'multiqc.templates.default' via 2024-05-31T19:26:45,918 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,919 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,919 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,920 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,921 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,923 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,923 even if it does not contain any `.py` files. 2024-05-31T19:26:45,924 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,924 directory, all directories are treated like packages. 2024-05-31T19:26:45,925 ******************************************************************************** 2024-05-31T19:26:45,926 !! 2024-05-31T19:26:45,926 check.warn(importable) 2024-05-31T19:26:45,927 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.css' is absent from the `packages` configuration. 2024-05-31T19:26:45,927 !! 2024-05-31T19:26:45,928 ******************************************************************************** 2024-05-31T19:26:45,929 ############################ 2024-05-31T19:26:45,930 # Package would be ignored # 2024-05-31T19:26:45,930 ############################ 2024-05-31T19:26:45,930 Python recognizes 'multiqc.templates.default.assets.css' as an importable package[^1], 2024-05-31T19:26:45,931 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,932 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,932 package, please make sure that 'multiqc.templates.default.assets.css' is explicitly added 2024-05-31T19:26:45,933 to the `packages` configuration field. 2024-05-31T19:26:45,933 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,934 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,934 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,935 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,936 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,937 If you don't want 'multiqc.templates.default.assets.css' to be distributed and are 2024-05-31T19:26:45,937 already explicitly excluding 'multiqc.templates.default.assets.css' via 2024-05-31T19:26:45,938 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,938 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,938 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,939 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,940 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,942 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,942 even if it does not contain any `.py` files. 2024-05-31T19:26:45,943 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,943 directory, all directories are treated like packages. 2024-05-31T19:26:45,944 ******************************************************************************** 2024-05-31T19:26:45,945 !! 2024-05-31T19:26:45,945 check.warn(importable) 2024-05-31T19:26:45,946 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.fonts' is absent from the `packages` configuration. 2024-05-31T19:26:45,947 !! 2024-05-31T19:26:45,948 ******************************************************************************** 2024-05-31T19:26:45,948 ############################ 2024-05-31T19:26:45,948 # Package would be ignored # 2024-05-31T19:26:45,949 ############################ 2024-05-31T19:26:45,950 Python recognizes 'multiqc.templates.default.assets.fonts' as an importable package[^1], 2024-05-31T19:26:45,950 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,951 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,952 package, please make sure that 'multiqc.templates.default.assets.fonts' is explicitly added 2024-05-31T19:26:45,952 to the `packages` configuration field. 2024-05-31T19:26:45,953 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,954 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,954 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,955 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,957 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,958 If you don't want 'multiqc.templates.default.assets.fonts' to be distributed and are 2024-05-31T19:26:45,958 already explicitly excluding 'multiqc.templates.default.assets.fonts' via 2024-05-31T19:26:45,958 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,959 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,959 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,960 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,961 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,962 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,962 even if it does not contain any `.py` files. 2024-05-31T19:26:45,963 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,963 directory, all directories are treated like packages. 2024-05-31T19:26:45,964 ******************************************************************************** 2024-05-31T19:26:45,965 !! 2024-05-31T19:26:45,965 check.warn(importable) 2024-05-31T19:26:45,966 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.img' is absent from the `packages` configuration. 2024-05-31T19:26:45,966 !! 2024-05-31T19:26:45,967 ******************************************************************************** 2024-05-31T19:26:45,967 ############################ 2024-05-31T19:26:45,968 # Package would be ignored # 2024-05-31T19:26:45,968 ############################ 2024-05-31T19:26:45,969 Python recognizes 'multiqc.templates.default.assets.img' as an importable package[^1], 2024-05-31T19:26:45,969 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,970 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,971 package, please make sure that 'multiqc.templates.default.assets.img' is explicitly added 2024-05-31T19:26:45,971 to the `packages` configuration field. 2024-05-31T19:26:45,972 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,973 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,973 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,974 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,976 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,977 If you don't want 'multiqc.templates.default.assets.img' to be distributed and are 2024-05-31T19:26:45,977 already explicitly excluding 'multiqc.templates.default.assets.img' via 2024-05-31T19:26:45,978 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:45,978 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:45,979 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:45,980 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:45,981 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:45,983 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:45,983 even if it does not contain any `.py` files. 2024-05-31T19:26:45,984 On the other hand, currently there is no concept of package data 2024-05-31T19:26:45,985 directory, all directories are treated like packages. 2024-05-31T19:26:45,985 ******************************************************************************** 2024-05-31T19:26:45,986 !! 2024-05-31T19:26:45,986 check.warn(importable) 2024-05-31T19:26:45,987 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js' is absent from the `packages` configuration. 2024-05-31T19:26:45,987 !! 2024-05-31T19:26:45,988 ******************************************************************************** 2024-05-31T19:26:45,989 ############################ 2024-05-31T19:26:45,990 # Package would be ignored # 2024-05-31T19:26:45,990 ############################ 2024-05-31T19:26:45,990 Python recognizes 'multiqc.templates.default.assets.js' as an importable package[^1], 2024-05-31T19:26:45,991 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:45,992 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:45,992 package, please make sure that 'multiqc.templates.default.assets.js' is explicitly added 2024-05-31T19:26:45,993 to the `packages` configuration field. 2024-05-31T19:26:45,994 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:45,994 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:45,995 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:45,996 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:45,997 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:45,998 If you don't want 'multiqc.templates.default.assets.js' to be distributed and are 2024-05-31T19:26:45,999 already explicitly excluding 'multiqc.templates.default.assets.js' via 2024-05-31T19:26:46,000 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,001 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,002 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,004 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,005 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,007 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,007 even if it does not contain any `.py` files. 2024-05-31T19:26:46,008 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,008 directory, all directories are treated like packages. 2024-05-31T19:26:46,009 ******************************************************************************** 2024-05-31T19:26:46,010 !! 2024-05-31T19:26:46,010 check.warn(importable) 2024-05-31T19:26:46,011 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js.packages' is absent from the `packages` configuration. 2024-05-31T19:26:46,011 !! 2024-05-31T19:26:46,012 ******************************************************************************** 2024-05-31T19:26:46,013 ############################ 2024-05-31T19:26:46,013 # Package would be ignored # 2024-05-31T19:26:46,014 ############################ 2024-05-31T19:26:46,014 Python recognizes 'multiqc.templates.default.assets.js.packages' as an importable package[^1], 2024-05-31T19:26:46,015 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,016 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,016 package, please make sure that 'multiqc.templates.default.assets.js.packages' is explicitly added 2024-05-31T19:26:46,017 to the `packages` configuration field. 2024-05-31T19:26:46,017 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,018 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,018 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,019 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,020 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,021 If you don't want 'multiqc.templates.default.assets.js.packages' to be distributed and are 2024-05-31T19:26:46,021 already explicitly excluding 'multiqc.templates.default.assets.js.packages' via 2024-05-31T19:26:46,021 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,022 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,022 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,023 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,024 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,025 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,026 even if it does not contain any `.py` files. 2024-05-31T19:26:46,026 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,027 directory, all directories are treated like packages. 2024-05-31T19:26:46,027 ******************************************************************************** 2024-05-31T19:26:46,029 !! 2024-05-31T19:26:46,029 check.warn(importable) 2024-05-31T19:26:46,030 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.default.assets.js.plots' is absent from the `packages` configuration. 2024-05-31T19:26:46,030 !! 2024-05-31T19:26:46,032 ******************************************************************************** 2024-05-31T19:26:46,032 ############################ 2024-05-31T19:26:46,033 # Package would be ignored # 2024-05-31T19:26:46,033 ############################ 2024-05-31T19:26:46,033 Python recognizes 'multiqc.templates.default.assets.js.plots' as an importable package[^1], 2024-05-31T19:26:46,034 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,036 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,036 package, please make sure that 'multiqc.templates.default.assets.js.plots' is explicitly added 2024-05-31T19:26:46,037 to the `packages` configuration field. 2024-05-31T19:26:46,038 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,038 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,039 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,040 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,041 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,042 If you don't want 'multiqc.templates.default.assets.js.plots' to be distributed and are 2024-05-31T19:26:46,043 already explicitly excluding 'multiqc.templates.default.assets.js.plots' via 2024-05-31T19:26:46,043 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,044 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,044 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,045 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,046 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,048 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,048 even if it does not contain any `.py` files. 2024-05-31T19:26:46,049 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,049 directory, all directories are treated like packages. 2024-05-31T19:26:46,050 ******************************************************************************** 2024-05-31T19:26:46,051 !! 2024-05-31T19:26:46,051 check.warn(importable) 2024-05-31T19:26:46,052 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.gathered' is absent from the `packages` configuration. 2024-05-31T19:26:46,052 !! 2024-05-31T19:26:46,053 ******************************************************************************** 2024-05-31T19:26:46,053 ############################ 2024-05-31T19:26:46,054 # Package would be ignored # 2024-05-31T19:26:46,054 ############################ 2024-05-31T19:26:46,055 Python recognizes 'multiqc.templates.gathered' as an importable package[^1], 2024-05-31T19:26:46,055 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,056 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,057 package, please make sure that 'multiqc.templates.gathered' is explicitly added 2024-05-31T19:26:46,058 to the `packages` configuration field. 2024-05-31T19:26:46,059 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,059 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,060 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,061 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,062 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,063 If you don't want 'multiqc.templates.gathered' to be distributed and are 2024-05-31T19:26:46,064 already explicitly excluding 'multiqc.templates.gathered' via 2024-05-31T19:26:46,064 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,065 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,066 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,067 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,069 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,071 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,072 even if it does not contain any `.py` files. 2024-05-31T19:26:46,072 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,073 directory, all directories are treated like packages. 2024-05-31T19:26:46,074 ******************************************************************************** 2024-05-31T19:26:46,075 !! 2024-05-31T19:26:46,076 check.warn(importable) 2024-05-31T19:26:46,077 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo' is absent from the `packages` configuration. 2024-05-31T19:26:46,077 !! 2024-05-31T19:26:46,079 ******************************************************************************** 2024-05-31T19:26:46,079 ############################ 2024-05-31T19:26:46,080 # Package would be ignored # 2024-05-31T19:26:46,081 ############################ 2024-05-31T19:26:46,081 Python recognizes 'multiqc.templates.geo' as an importable package[^1], 2024-05-31T19:26:46,082 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,083 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,084 package, please make sure that 'multiqc.templates.geo' is explicitly added 2024-05-31T19:26:46,085 to the `packages` configuration field. 2024-05-31T19:26:46,086 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,087 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,087 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,089 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,090 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,091 If you don't want 'multiqc.templates.geo' to be distributed and are 2024-05-31T19:26:46,092 already explicitly excluding 'multiqc.templates.geo' via 2024-05-31T19:26:46,093 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,093 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,094 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,095 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,096 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,098 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,099 even if it does not contain any `.py` files. 2024-05-31T19:26:46,100 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,100 directory, all directories are treated like packages. 2024-05-31T19:26:46,101 ******************************************************************************** 2024-05-31T19:26:46,102 !! 2024-05-31T19:26:46,103 check.warn(importable) 2024-05-31T19:26:46,103 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo.assets.css' is absent from the `packages` configuration. 2024-05-31T19:26:46,104 !! 2024-05-31T19:26:46,105 ******************************************************************************** 2024-05-31T19:26:46,106 ############################ 2024-05-31T19:26:46,106 # Package would be ignored # 2024-05-31T19:26:46,107 ############################ 2024-05-31T19:26:46,108 Python recognizes 'multiqc.templates.geo.assets.css' as an importable package[^1], 2024-05-31T19:26:46,108 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,110 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,110 package, please make sure that 'multiqc.templates.geo.assets.css' is explicitly added 2024-05-31T19:26:46,111 to the `packages` configuration field. 2024-05-31T19:26:46,112 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,113 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,114 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,115 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,116 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,117 If you don't want 'multiqc.templates.geo.assets.css' to be distributed and are 2024-05-31T19:26:46,118 already explicitly excluding 'multiqc.templates.geo.assets.css' via 2024-05-31T19:26:46,118 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,119 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,119 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,120 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,121 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,123 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,123 even if it does not contain any `.py` files. 2024-05-31T19:26:46,124 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,125 directory, all directories are treated like packages. 2024-05-31T19:26:46,125 ******************************************************************************** 2024-05-31T19:26:46,126 !! 2024-05-31T19:26:46,127 check.warn(importable) 2024-05-31T19:26:46,127 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.geo.assets.img' is absent from the `packages` configuration. 2024-05-31T19:26:46,128 !! 2024-05-31T19:26:46,130 ******************************************************************************** 2024-05-31T19:26:46,130 ############################ 2024-05-31T19:26:46,131 # Package would be ignored # 2024-05-31T19:26:46,131 ############################ 2024-05-31T19:26:46,132 Python recognizes 'multiqc.templates.geo.assets.img' as an importable package[^1], 2024-05-31T19:26:46,133 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,134 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,134 package, please make sure that 'multiqc.templates.geo.assets.img' is explicitly added 2024-05-31T19:26:46,135 to the `packages` configuration field. 2024-05-31T19:26:46,136 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,138 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,139 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,140 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,141 If you don't want 'multiqc.templates.geo.assets.img' to be distributed and are 2024-05-31T19:26:46,142 already explicitly excluding 'multiqc.templates.geo.assets.img' via 2024-05-31T19:26:46,143 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,143 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,144 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,145 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,146 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,148 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,149 even if it does not contain any `.py` files. 2024-05-31T19:26:46,150 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,150 directory, all directories are treated like packages. 2024-05-31T19:26:46,151 ******************************************************************************** 2024-05-31T19:26:46,152 !! 2024-05-31T19:26:46,152 check.warn(importable) 2024-05-31T19:26:46,153 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.sections' is absent from the `packages` configuration. 2024-05-31T19:26:46,154 !! 2024-05-31T19:26:46,155 ******************************************************************************** 2024-05-31T19:26:46,155 ############################ 2024-05-31T19:26:46,156 # Package would be ignored # 2024-05-31T19:26:46,156 ############################ 2024-05-31T19:26:46,157 Python recognizes 'multiqc.templates.sections' as an importable package[^1], 2024-05-31T19:26:46,157 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,159 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,159 package, please make sure that 'multiqc.templates.sections' is explicitly added 2024-05-31T19:26:46,160 to the `packages` configuration field. 2024-05-31T19:26:46,161 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,162 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,162 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,163 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,164 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,165 If you don't want 'multiqc.templates.sections' to be distributed and are 2024-05-31T19:26:46,166 already explicitly excluding 'multiqc.templates.sections' via 2024-05-31T19:26:46,166 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,167 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,167 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,168 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,169 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,171 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,171 even if it does not contain any `.py` files. 2024-05-31T19:26:46,172 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,172 directory, all directories are treated like packages. 2024-05-31T19:26:46,173 ******************************************************************************** 2024-05-31T19:26:46,174 !! 2024-05-31T19:26:46,174 check.warn(importable) 2024-05-31T19:26:46,175 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.templates.simple' is absent from the `packages` configuration. 2024-05-31T19:26:46,175 !! 2024-05-31T19:26:46,176 ******************************************************************************** 2024-05-31T19:26:46,177 ############################ 2024-05-31T19:26:46,177 # Package would be ignored # 2024-05-31T19:26:46,178 ############################ 2024-05-31T19:26:46,178 Python recognizes 'multiqc.templates.simple' as an importable package[^1], 2024-05-31T19:26:46,179 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,180 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,180 package, please make sure that 'multiqc.templates.simple' is explicitly added 2024-05-31T19:26:46,181 to the `packages` configuration field. 2024-05-31T19:26:46,182 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,182 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,183 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,183 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,184 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,185 If you don't want 'multiqc.templates.simple' to be distributed and are 2024-05-31T19:26:46,186 already explicitly excluding 'multiqc.templates.simple' via 2024-05-31T19:26:46,186 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,186 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,187 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,188 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,189 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,190 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,191 even if it does not contain any `.py` files. 2024-05-31T19:26:46,191 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,192 directory, all directories are treated like packages. 2024-05-31T19:26:46,192 ******************************************************************************** 2024-05-31T19:26:46,193 !! 2024-05-31T19:26:46,193 check.warn(importable) 2024-05-31T19:26:46,194 /tmp/pip-build-env-mt7br9rt/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multiqc.utils' is absent from the `packages` configuration. 2024-05-31T19:26:46,194 !! 2024-05-31T19:26:46,195 ******************************************************************************** 2024-05-31T19:26:46,196 ############################ 2024-05-31T19:26:46,196 # Package would be ignored # 2024-05-31T19:26:46,197 ############################ 2024-05-31T19:26:46,197 Python recognizes 'multiqc.utils' as an importable package[^1], 2024-05-31T19:26:46,198 but it is absent from setuptools' `packages` configuration. 2024-05-31T19:26:46,199 This leads to an ambiguous overall configuration. If you want to distribute this 2024-05-31T19:26:46,199 package, please make sure that 'multiqc.utils' is explicitly added 2024-05-31T19:26:46,200 to the `packages` configuration field. 2024-05-31T19:26:46,201 Alternatively, you can also rely on setuptools' discovery methods 2024-05-31T19:26:46,201 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-05-31T19:26:46,202 instead of `find_packages(...)`/`find:`). 2024-05-31T19:26:46,203 You can read more about "package discovery" on setuptools documentation page: 2024-05-31T19:26:46,203 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-05-31T19:26:46,205 If you don't want 'multiqc.utils' to be distributed and are 2024-05-31T19:26:46,205 already explicitly excluding 'multiqc.utils' via 2024-05-31T19:26:46,206 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-05-31T19:26:46,206 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-05-31T19:26:46,207 combination with a more fine grained `package-data` configuration. 2024-05-31T19:26:46,208 You can read more about "package data files" on setuptools documentation page: 2024-05-31T19:26:46,209 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-05-31T19:26:46,210 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-05-31T19:26:46,210 even if it does not contain any `.py` files. 2024-05-31T19:26:46,211 On the other hand, currently there is no concept of package data 2024-05-31T19:26:46,211 directory, all directories are treated like packages. 2024-05-31T19:26:46,212 ******************************************************************************** 2024-05-31T19:26:46,212 !! 2024-05-31T19:26:46,213 check.warn(importable) 2024-05-31T19:26:46,213 copying multiqc/config_defaults.yaml -> build/lib/multiqc 2024-05-31T19:26:46,214 copying multiqc/search_patterns.yaml -> build/lib/multiqc 2024-05-31T19:26:46,214 creating build/lib/multiqc/core 2024-05-31T19:26:46,215 copying multiqc/core/__init__.py -> build/lib/multiqc/core 2024-05-31T19:26:46,215 copying multiqc/core/exceptions.py -> build/lib/multiqc/core 2024-05-31T19:26:46,216 copying multiqc/core/exec_modules.py -> build/lib/multiqc/core 2024-05-31T19:26:46,216 copying multiqc/core/file_search.py -> build/lib/multiqc/core 2024-05-31T19:26:46,217 copying multiqc/core/init_log.py -> build/lib/multiqc/core 2024-05-31T19:26:46,217 copying multiqc/core/plugin_hooks.py -> build/lib/multiqc/core 2024-05-31T19:26:46,218 copying multiqc/core/software_versions.py -> build/lib/multiqc/core 2024-05-31T19:26:46,218 copying multiqc/core/strict_helpers.py -> build/lib/multiqc/core 2024-05-31T19:26:46,219 copying multiqc/core/update_config.py -> build/lib/multiqc/core 2024-05-31T19:26:46,219 copying multiqc/core/version_check.py -> build/lib/multiqc/core 2024-05-31T19:26:46,219 copying multiqc/core/write_results.py -> build/lib/multiqc/core 2024-05-31T19:26:46,220 creating build/lib/multiqc/modules 2024-05-31T19:26:46,220 copying multiqc/modules/__init__.py -> build/lib/multiqc/modules 2024-05-31T19:26:46,221 copying multiqc/modules/profile_runtime.py -> build/lib/multiqc/modules 2024-05-31T19:26:46,221 copying multiqc/modules/software_versions.py -> build/lib/multiqc/modules 2024-05-31T19:26:46,222 creating build/lib/multiqc/modules/adapterremoval 2024-05-31T19:26:46,222 copying multiqc/modules/adapterremoval/__init__.py -> build/lib/multiqc/modules/adapterremoval 2024-05-31T19:26:46,223 copying multiqc/modules/adapterremoval/adapterremoval.py -> build/lib/multiqc/modules/adapterremoval 2024-05-31T19:26:46,223 creating build/lib/multiqc/modules/afterqc 2024-05-31T19:26:46,224 copying multiqc/modules/afterqc/__init__.py -> build/lib/multiqc/modules/afterqc 2024-05-31T19:26:46,224 copying multiqc/modules/afterqc/afterqc.py -> build/lib/multiqc/modules/afterqc 2024-05-31T19:26:46,225 creating build/lib/multiqc/modules/anglerfish 2024-05-31T19:26:46,225 copying multiqc/modules/anglerfish/__init__.py -> build/lib/multiqc/modules/anglerfish 2024-05-31T19:26:46,226 copying multiqc/modules/anglerfish/anglerfish.py -> build/lib/multiqc/modules/anglerfish 2024-05-31T19:26:46,226 creating build/lib/multiqc/modules/bakta 2024-05-31T19:26:46,227 copying multiqc/modules/bakta/__init__.py -> build/lib/multiqc/modules/bakta 2024-05-31T19:26:46,227 copying multiqc/modules/bakta/bakta.py -> build/lib/multiqc/modules/bakta 2024-05-31T19:26:46,228 creating build/lib/multiqc/modules/bamdst 2024-05-31T19:26:46,228 copying multiqc/modules/bamdst/__init__.py -> build/lib/multiqc/modules/bamdst 2024-05-31T19:26:46,229 copying multiqc/modules/bamdst/bamdst.py -> build/lib/multiqc/modules/bamdst 2024-05-31T19:26:46,229 creating build/lib/multiqc/modules/bamtools 2024-05-31T19:26:46,230 copying multiqc/modules/bamtools/__init__.py -> build/lib/multiqc/modules/bamtools 2024-05-31T19:26:46,230 copying multiqc/modules/bamtools/bamtools.py -> build/lib/multiqc/modules/bamtools 2024-05-31T19:26:46,231 copying multiqc/modules/bamtools/stats.py -> build/lib/multiqc/modules/bamtools 2024-05-31T19:26:46,231 creating build/lib/multiqc/modules/bbduk 2024-05-31T19:26:46,232 copying multiqc/modules/bbduk/__init__.py -> build/lib/multiqc/modules/bbduk 2024-05-31T19:26:46,232 copying multiqc/modules/bbduk/bbduk.py -> build/lib/multiqc/modules/bbduk 2024-05-31T19:26:46,233 creating build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,233 copying multiqc/modules/bbmap/__init__.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,234 copying multiqc/modules/bbmap/bbmap.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,234 copying multiqc/modules/bbmap/bbmap_filetypes.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,234 copying multiqc/modules/bbmap/plot_aqhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,235 copying multiqc/modules/bbmap/plot_basic_hist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,235 copying multiqc/modules/bbmap/plot_bhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,236 copying multiqc/modules/bbmap/plot_bqhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,236 copying multiqc/modules/bbmap/plot_covhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,237 copying multiqc/modules/bbmap/plot_idhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,237 copying multiqc/modules/bbmap/plot_ihist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,237 copying multiqc/modules/bbmap/plot_indelhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,238 copying multiqc/modules/bbmap/plot_mhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,238 copying multiqc/modules/bbmap/plot_qahist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,239 copying multiqc/modules/bbmap/plot_qchist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,239 copying multiqc/modules/bbmap/plot_qhist.py -> build/lib/multiqc/modules/bbmap 2024-05-31T19:26:46,240 creating build/lib/multiqc/modules/bcftools 2024-05-31T19:26:46,240 copying multiqc/modules/bcftools/__init__.py -> build/lib/multiqc/modules/bcftools 2024-05-31T19:26:46,241 copying multiqc/modules/bcftools/bcftools.py -> build/lib/multiqc/modules/bcftools 2024-05-31T19:26:46,241 copying multiqc/modules/bcftools/stats.py -> build/lib/multiqc/modules/bcftools 2024-05-31T19:26:46,242 creating build/lib/multiqc/modules/bcl2fastq 2024-05-31T19:26:46,242 copying multiqc/modules/bcl2fastq/__init__.py -> build/lib/multiqc/modules/bcl2fastq 2024-05-31T19:26:46,243 copying multiqc/modules/bcl2fastq/bcl2fastq.py -> build/lib/multiqc/modules/bcl2fastq 2024-05-31T19:26:46,243 creating build/lib/multiqc/modules/bclconvert 2024-05-31T19:26:46,244 copying multiqc/modules/bclconvert/__init__.py -> build/lib/multiqc/modules/bclconvert 2024-05-31T19:26:46,244 copying multiqc/modules/bclconvert/bclconvert.py -> build/lib/multiqc/modules/bclconvert 2024-05-31T19:26:46,245 creating build/lib/multiqc/modules/biobambam2 2024-05-31T19:26:46,245 copying multiqc/modules/biobambam2/__init__.py -> build/lib/multiqc/modules/biobambam2 2024-05-31T19:26:46,246 copying multiqc/modules/biobambam2/biobambam2.py -> build/lib/multiqc/modules/biobambam2 2024-05-31T19:26:46,246 creating build/lib/multiqc/modules/biobloomtools 2024-05-31T19:26:46,247 copying multiqc/modules/biobloomtools/__init__.py -> build/lib/multiqc/modules/biobloomtools 2024-05-31T19:26:46,247 copying multiqc/modules/biobloomtools/biobloomtools.py -> build/lib/multiqc/modules/biobloomtools 2024-05-31T19:26:46,248 creating build/lib/multiqc/modules/biscuit 2024-05-31T19:26:46,249 copying multiqc/modules/biscuit/__init__.py -> build/lib/multiqc/modules/biscuit 2024-05-31T19:26:46,249 copying multiqc/modules/biscuit/biscuit.py -> build/lib/multiqc/modules/biscuit 2024-05-31T19:26:46,250 creating build/lib/multiqc/modules/bismark 2024-05-31T19:26:46,250 copying multiqc/modules/bismark/__init__.py -> build/lib/multiqc/modules/bismark 2024-05-31T19:26:46,251 copying multiqc/modules/bismark/bismark.py -> build/lib/multiqc/modules/bismark 2024-05-31T19:26:46,251 creating build/lib/multiqc/modules/bowtie1 2024-05-31T19:26:46,252 copying multiqc/modules/bowtie1/__init__.py -> build/lib/multiqc/modules/bowtie1 2024-05-31T19:26:46,252 copying multiqc/modules/bowtie1/bowtie1.py -> build/lib/multiqc/modules/bowtie1 2024-05-31T19:26:46,253 creating build/lib/multiqc/modules/bowtie2 2024-05-31T19:26:46,253 copying multiqc/modules/bowtie2/__init__.py -> build/lib/multiqc/modules/bowtie2 2024-05-31T19:26:46,254 copying multiqc/modules/bowtie2/bowtie2.py -> build/lib/multiqc/modules/bowtie2 2024-05-31T19:26:46,254 creating build/lib/multiqc/modules/bracken 2024-05-31T19:26:46,255 copying multiqc/modules/bracken/__init__.py -> build/lib/multiqc/modules/bracken 2024-05-31T19:26:46,255 copying multiqc/modules/bracken/bracken.py -> build/lib/multiqc/modules/bracken 2024-05-31T19:26:46,256 creating build/lib/multiqc/modules/busco 2024-05-31T19:26:46,256 copying multiqc/modules/busco/__init__.py -> build/lib/multiqc/modules/busco 2024-05-31T19:26:46,257 copying multiqc/modules/busco/busco.py -> build/lib/multiqc/modules/busco 2024-05-31T19:26:46,258 creating build/lib/multiqc/modules/bustools 2024-05-31T19:26:46,258 copying multiqc/modules/bustools/__init__.py -> build/lib/multiqc/modules/bustools 2024-05-31T19:26:46,259 copying multiqc/modules/bustools/bustools.py -> build/lib/multiqc/modules/bustools 2024-05-31T19:26:46,259 creating build/lib/multiqc/modules/ccs 2024-05-31T19:26:46,259 copying multiqc/modules/ccs/__init__.py -> build/lib/multiqc/modules/ccs 2024-05-31T19:26:46,260 copying multiqc/modules/ccs/ccs.py -> build/lib/multiqc/modules/ccs 2024-05-31T19:26:46,260 creating build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,261 copying multiqc/modules/cellranger/__init__.py -> build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,261 copying multiqc/modules/cellranger/cellranger.py -> build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,262 copying multiqc/modules/cellranger/count.py -> build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,262 copying multiqc/modules/cellranger/utils.py -> build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,263 copying multiqc/modules/cellranger/vdj.py -> build/lib/multiqc/modules/cellranger 2024-05-31T19:26:46,264 creating build/lib/multiqc/modules/checkqc 2024-05-31T19:26:46,264 copying multiqc/modules/checkqc/__init__.py -> build/lib/multiqc/modules/checkqc 2024-05-31T19:26:46,265 copying multiqc/modules/checkqc/checkqc.py -> build/lib/multiqc/modules/checkqc 2024-05-31T19:26:46,265 creating build/lib/multiqc/modules/clipandmerge 2024-05-31T19:26:46,266 copying multiqc/modules/clipandmerge/__init__.py -> build/lib/multiqc/modules/clipandmerge 2024-05-31T19:26:46,267 copying multiqc/modules/clipandmerge/clipandmerge.py -> build/lib/multiqc/modules/clipandmerge 2024-05-31T19:26:46,267 creating build/lib/multiqc/modules/clusterflow 2024-05-31T19:26:46,268 copying multiqc/modules/clusterflow/__init__.py -> build/lib/multiqc/modules/clusterflow 2024-05-31T19:26:46,268 copying multiqc/modules/clusterflow/clusterflow.py -> build/lib/multiqc/modules/clusterflow 2024-05-31T19:26:46,269 creating build/lib/multiqc/modules/conpair 2024-05-31T19:26:46,269 copying multiqc/modules/conpair/__init__.py -> build/lib/multiqc/modules/conpair 2024-05-31T19:26:46,270 copying multiqc/modules/conpair/conpair.py -> build/lib/multiqc/modules/conpair 2024-05-31T19:26:46,270 creating build/lib/multiqc/modules/custom_content 2024-05-31T19:26:46,271 copying multiqc/modules/custom_content/__init__.py -> build/lib/multiqc/modules/custom_content 2024-05-31T19:26:46,272 copying multiqc/modules/custom_content/custom_content.py -> build/lib/multiqc/modules/custom_content 2024-05-31T19:26:46,272 creating build/lib/multiqc/modules/cutadapt 2024-05-31T19:26:46,273 copying multiqc/modules/cutadapt/__init__.py -> build/lib/multiqc/modules/cutadapt 2024-05-31T19:26:46,274 copying multiqc/modules/cutadapt/cutadapt.py -> build/lib/multiqc/modules/cutadapt 2024-05-31T19:26:46,274 creating build/lib/multiqc/modules/damageprofiler 2024-05-31T19:26:46,275 copying multiqc/modules/damageprofiler/__init__.py -> build/lib/multiqc/modules/damageprofiler 2024-05-31T19:26:46,275 copying multiqc/modules/damageprofiler/damageprofiler.py -> build/lib/multiqc/modules/damageprofiler 2024-05-31T19:26:46,276 creating build/lib/multiqc/modules/dedup 2024-05-31T19:26:46,276 copying multiqc/modules/dedup/__init__.py -> build/lib/multiqc/modules/dedup 2024-05-31T19:26:46,276 copying multiqc/modules/dedup/dedup.py -> build/lib/multiqc/modules/dedup 2024-05-31T19:26:46,277 creating build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,277 copying multiqc/modules/deeptools/__init__.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,278 copying multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,278 copying multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,279 copying multiqc/modules/deeptools/deeptools.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,279 copying multiqc/modules/deeptools/estimateReadFiltering.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,280 copying multiqc/modules/deeptools/plotCorrelation.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,280 copying multiqc/modules/deeptools/plotCoverage.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,281 copying multiqc/modules/deeptools/plotEnrichment.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,282 copying multiqc/modules/deeptools/plotFingerprint.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,282 copying multiqc/modules/deeptools/plotPCA.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,283 copying multiqc/modules/deeptools/plotProfile.py -> build/lib/multiqc/modules/deeptools 2024-05-31T19:26:46,283 creating build/lib/multiqc/modules/diamond 2024-05-31T19:26:46,284 copying multiqc/modules/diamond/__init__.py -> build/lib/multiqc/modules/diamond 2024-05-31T19:26:46,284 copying multiqc/modules/diamond/diamond.py -> build/lib/multiqc/modules/diamond 2024-05-31T19:26:46,285 creating build/lib/multiqc/modules/disambiguate 2024-05-31T19:26:46,286 copying multiqc/modules/disambiguate/__init__.py -> build/lib/multiqc/modules/disambiguate 2024-05-31T19:26:46,286 copying multiqc/modules/disambiguate/disambiguate.py -> build/lib/multiqc/modules/disambiguate 2024-05-31T19:26:46,287 creating build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,287 copying multiqc/modules/dragen/__init__.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,288 copying multiqc/modules/dragen/coverage_hist.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,288 copying multiqc/modules/dragen/coverage_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,289 copying multiqc/modules/dragen/coverage_per_contig.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,289 copying multiqc/modules/dragen/dragen.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,290 copying multiqc/modules/dragen/dragen_gc_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,290 copying multiqc/modules/dragen/fragment_length.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,291 copying multiqc/modules/dragen/mapping_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,291 copying multiqc/modules/dragen/overall_mean_cov.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,292 copying multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,292 copying multiqc/modules/dragen/rna_quant_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,293 copying multiqc/modules/dragen/rna_transcript_cov.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,294 copying multiqc/modules/dragen/sc_atac_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,294 copying multiqc/modules/dragen/sc_rna_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,295 copying multiqc/modules/dragen/time_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,295 copying multiqc/modules/dragen/trimmer_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,296 copying multiqc/modules/dragen/utils.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,296 copying multiqc/modules/dragen/vc_metrics.py -> build/lib/multiqc/modules/dragen 2024-05-31T19:26:46,296 creating build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,297 copying multiqc/modules/dragen_fastqc/__init__.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,297 copying multiqc/modules/dragen_fastqc/base_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,298 copying multiqc/modules/dragen_fastqc/content_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,298 copying multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,298 copying multiqc/modules/dragen_fastqc/gc_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,299 copying multiqc/modules/dragen_fastqc/read_metrics.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,299 copying multiqc/modules/dragen_fastqc/util.py -> build/lib/multiqc/modules/dragen_fastqc 2024-05-31T19:26:46,300 creating build/lib/multiqc/modules/dragen_fastqc/assets 2024-05-31T19:26:46,300 creating build/lib/multiqc/modules/dragen_fastqc/assets/js 2024-05-31T19:26:46,301 copying multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/lib/multiqc/modules/dragen_fastqc/assets/js 2024-05-31T19:26:46,301 creating build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:46,302 copying multiqc/modules/eigenstratdatabasetools/__init__.py -> build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:46,302 copying multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/lib/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:46,303 creating build/lib/multiqc/modules/fastp 2024-05-31T19:26:46,303 copying multiqc/modules/fastp/__init__.py -> build/lib/multiqc/modules/fastp 2024-05-31T19:26:46,304 copying multiqc/modules/fastp/fastp.py -> build/lib/multiqc/modules/fastp 2024-05-31T19:26:46,304 creating build/lib/multiqc/modules/fastq_screen 2024-05-31T19:26:46,305 copying multiqc/modules/fastq_screen/__init__.py -> build/lib/multiqc/modules/fastq_screen 2024-05-31T19:26:46,305 copying multiqc/modules/fastq_screen/fastq_screen.py -> build/lib/multiqc/modules/fastq_screen 2024-05-31T19:26:46,306 creating build/lib/multiqc/modules/fastqc 2024-05-31T19:26:46,306 copying multiqc/modules/fastqc/__init__.py -> build/lib/multiqc/modules/fastqc 2024-05-31T19:26:46,307 copying multiqc/modules/fastqc/fastqc.py -> build/lib/multiqc/modules/fastqc 2024-05-31T19:26:46,310 creating build/lib/multiqc/modules/fastqc/assets 2024-05-31T19:26:46,310 creating build/lib/multiqc/modules/fastqc/assets/css 2024-05-31T19:26:46,311 copying multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/lib/multiqc/modules/fastqc/assets/css 2024-05-31T19:26:46,313 creating build/lib/multiqc/modules/fastqc/assets/js 2024-05-31T19:26:46,314 copying multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/lib/multiqc/modules/fastqc/assets/js 2024-05-31T19:26:46,317 creating build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:46,318 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:46,320 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:46,322 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:46,325 copying multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:46,327 creating build/lib/multiqc/modules/featureCounts 2024-05-31T19:26:46,327 copying multiqc/modules/featureCounts/__init__.py -> build/lib/multiqc/modules/featureCounts 2024-05-31T19:26:46,329 copying multiqc/modules/featureCounts/feature_counts.py -> build/lib/multiqc/modules/featureCounts 2024-05-31T19:26:46,332 creating build/lib/multiqc/modules/fgbio 2024-05-31T19:26:46,332 copying multiqc/modules/fgbio/ErrorRateByReadPosition.py -> build/lib/multiqc/modules/fgbio 2024-05-31T19:26:46,335 copying multiqc/modules/fgbio/__init__.py -> build/lib/multiqc/modules/fgbio 2024-05-31T19:26:46,337 copying multiqc/modules/fgbio/fgbio.py -> build/lib/multiqc/modules/fgbio 2024-05-31T19:26:46,339 copying multiqc/modules/fgbio/groupreadsbyumi.py -> build/lib/multiqc/modules/fgbio 2024-05-31T19:26:46,341 creating build/lib/multiqc/modules/filtlong 2024-05-31T19:26:46,342 copying multiqc/modules/filtlong/__init__.py -> build/lib/multiqc/modules/filtlong 2024-05-31T19:26:46,344 copying multiqc/modules/filtlong/filtlong.py -> build/lib/multiqc/modules/filtlong 2024-05-31T19:26:46,346 creating build/lib/multiqc/modules/flash 2024-05-31T19:26:46,347 copying multiqc/modules/flash/__init__.py -> build/lib/multiqc/modules/flash 2024-05-31T19:26:46,349 copying multiqc/modules/flash/flash.py -> build/lib/multiqc/modules/flash 2024-05-31T19:26:46,351 creating build/lib/multiqc/modules/flexbar 2024-05-31T19:26:46,352 copying multiqc/modules/flexbar/__init__.py -> build/lib/multiqc/modules/flexbar 2024-05-31T19:26:46,354 copying multiqc/modules/flexbar/flexbar.py -> build/lib/multiqc/modules/flexbar 2024-05-31T19:26:46,356 creating build/lib/multiqc/modules/freyja 2024-05-31T19:26:46,357 copying multiqc/modules/freyja/__init__.py -> build/lib/multiqc/modules/freyja 2024-05-31T19:26:46,359 copying multiqc/modules/freyja/freyja.py -> build/lib/multiqc/modules/freyja 2024-05-31T19:26:46,362 creating build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,363 copying multiqc/modules/gatk/__init__.py -> build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,365 copying multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,367 copying multiqc/modules/gatk/base_recalibrator.py -> build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,370 copying multiqc/modules/gatk/gatk.py -> build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,372 copying multiqc/modules/gatk/varianteval.py -> build/lib/multiqc/modules/gatk 2024-05-31T19:26:46,374 creating build/lib/multiqc/modules/gffcompare 2024-05-31T19:26:46,375 copying multiqc/modules/gffcompare/__init__.py -> build/lib/multiqc/modules/gffcompare 2024-05-31T19:26:46,377 copying multiqc/modules/gffcompare/gffcompare.py -> build/lib/multiqc/modules/gffcompare 2024-05-31T19:26:46,380 creating build/lib/multiqc/modules/goleft_indexcov 2024-05-31T19:26:46,381 copying multiqc/modules/goleft_indexcov/__init__.py -> build/lib/multiqc/modules/goleft_indexcov 2024-05-31T19:26:46,383 copying multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/lib/multiqc/modules/goleft_indexcov 2024-05-31T19:26:46,385 creating build/lib/multiqc/modules/gopeaks 2024-05-31T19:26:46,386 copying multiqc/modules/gopeaks/__init__.py -> build/lib/multiqc/modules/gopeaks 2024-05-31T19:26:46,388 copying multiqc/modules/gopeaks/gopeaks.py -> build/lib/multiqc/modules/gopeaks 2024-05-31T19:26:46,391 creating build/lib/multiqc/modules/happy 2024-05-31T19:26:46,391 copying multiqc/modules/happy/__init__.py -> build/lib/multiqc/modules/happy 2024-05-31T19:26:46,394 copying multiqc/modules/happy/happy.py -> build/lib/multiqc/modules/happy 2024-05-31T19:26:46,396 creating build/lib/multiqc/modules/hicexplorer 2024-05-31T19:26:46,397 copying multiqc/modules/hicexplorer/__init__.py -> build/lib/multiqc/modules/hicexplorer 2024-05-31T19:26:46,400 copying multiqc/modules/hicexplorer/hicexplorer.py -> build/lib/multiqc/modules/hicexplorer 2024-05-31T19:26:46,402 creating build/lib/multiqc/modules/hicpro 2024-05-31T19:26:46,403 copying multiqc/modules/hicpro/__init__.py -> build/lib/multiqc/modules/hicpro 2024-05-31T19:26:46,405 copying multiqc/modules/hicpro/hicpro.py -> build/lib/multiqc/modules/hicpro 2024-05-31T19:26:46,408 creating build/lib/multiqc/modules/hicup 2024-05-31T19:26:46,408 copying multiqc/modules/hicup/__init__.py -> build/lib/multiqc/modules/hicup 2024-05-31T19:26:46,410 copying multiqc/modules/hicup/hicup.py -> build/lib/multiqc/modules/hicup 2024-05-31T19:26:46,413 creating build/lib/multiqc/modules/hifiasm 2024-05-31T19:26:46,413 copying multiqc/modules/hifiasm/__init__.py -> build/lib/multiqc/modules/hifiasm 2024-05-31T19:26:46,415 copying multiqc/modules/hifiasm/hifiasm.py -> build/lib/multiqc/modules/hifiasm 2024-05-31T19:26:46,418 creating build/lib/multiqc/modules/hisat2 2024-05-31T19:26:46,419 copying multiqc/modules/hisat2/__init__.py -> build/lib/multiqc/modules/hisat2 2024-05-31T19:26:46,421 copying multiqc/modules/hisat2/hisat2.py -> build/lib/multiqc/modules/hisat2 2024-05-31T19:26:46,423 creating build/lib/multiqc/modules/homer 2024-05-31T19:26:46,424 copying multiqc/modules/homer/__init__.py -> build/lib/multiqc/modules/homer 2024-05-31T19:26:46,426 copying multiqc/modules/homer/findpeaks.py -> build/lib/multiqc/modules/homer 2024-05-31T19:26:46,428 copying multiqc/modules/homer/homer.py -> build/lib/multiqc/modules/homer 2024-05-31T19:26:46,429 copying multiqc/modules/homer/tagdirectory.py -> build/lib/multiqc/modules/homer 2024-05-31T19:26:46,432 creating build/lib/multiqc/modules/hops 2024-05-31T19:26:46,433 copying multiqc/modules/hops/__init__.py -> build/lib/multiqc/modules/hops 2024-05-31T19:26:46,435 copying multiqc/modules/hops/hops.py -> build/lib/multiqc/modules/hops 2024-05-31T19:26:46,437 creating build/lib/multiqc/modules/hostile 2024-05-31T19:26:46,438 copying multiqc/modules/hostile/__init__.py -> build/lib/multiqc/modules/hostile 2024-05-31T19:26:46,440 copying multiqc/modules/hostile/hostile.py -> build/lib/multiqc/modules/hostile 2024-05-31T19:26:46,442 creating build/lib/multiqc/modules/htseq 2024-05-31T19:26:46,443 copying multiqc/modules/htseq/__init__.py -> build/lib/multiqc/modules/htseq 2024-05-31T19:26:46,445 copying multiqc/modules/htseq/htseq.py -> build/lib/multiqc/modules/htseq 2024-05-31T19:26:46,448 creating build/lib/multiqc/modules/humid 2024-05-31T19:26:46,449 copying multiqc/modules/humid/__init__.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,451 copying multiqc/modules/humid/clusters.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,453 copying multiqc/modules/humid/counts.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,455 copying multiqc/modules/humid/humid.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,457 copying multiqc/modules/humid/neighbours.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,459 copying multiqc/modules/humid/stats.py -> build/lib/multiqc/modules/humid 2024-05-31T19:26:46,461 creating build/lib/multiqc/modules/interop 2024-05-31T19:26:46,462 copying multiqc/modules/interop/__init__.py -> build/lib/multiqc/modules/interop 2024-05-31T19:26:46,464 copying multiqc/modules/interop/interop.py -> build/lib/multiqc/modules/interop 2024-05-31T19:26:46,467 creating build/lib/multiqc/modules/isoseq 2024-05-31T19:26:46,468 copying multiqc/modules/isoseq/__init__.py -> build/lib/multiqc/modules/isoseq 2024-05-31T19:26:46,470 copying multiqc/modules/isoseq/isoseq.py -> build/lib/multiqc/modules/isoseq 2024-05-31T19:26:46,473 creating build/lib/multiqc/modules/ivar 2024-05-31T19:26:46,474 copying multiqc/modules/ivar/__init__.py -> build/lib/multiqc/modules/ivar 2024-05-31T19:26:46,476 copying multiqc/modules/ivar/ivar.py -> build/lib/multiqc/modules/ivar 2024-05-31T19:26:46,478 creating build/lib/multiqc/modules/jcvi 2024-05-31T19:26:46,479 copying multiqc/modules/jcvi/__init__.py -> build/lib/multiqc/modules/jcvi 2024-05-31T19:26:46,481 copying multiqc/modules/jcvi/jcvi.py -> build/lib/multiqc/modules/jcvi 2024-05-31T19:26:46,483 creating build/lib/multiqc/modules/jellyfish 2024-05-31T19:26:46,484 copying multiqc/modules/jellyfish/__init__.py -> build/lib/multiqc/modules/jellyfish 2024-05-31T19:26:46,486 copying multiqc/modules/jellyfish/jellyfish.py -> build/lib/multiqc/modules/jellyfish 2024-05-31T19:26:46,488 creating build/lib/multiqc/modules/kaiju 2024-05-31T19:26:46,489 copying multiqc/modules/kaiju/__init__.py -> build/lib/multiqc/modules/kaiju 2024-05-31T19:26:46,491 copying multiqc/modules/kaiju/kaiju.py -> build/lib/multiqc/modules/kaiju 2024-05-31T19:26:46,494 creating build/lib/multiqc/modules/kallisto 2024-05-31T19:26:46,494 copying multiqc/modules/kallisto/__init__.py -> build/lib/multiqc/modules/kallisto 2024-05-31T19:26:46,496 copying multiqc/modules/kallisto/kallisto.py -> build/lib/multiqc/modules/kallisto 2024-05-31T19:26:46,499 creating build/lib/multiqc/modules/kat 2024-05-31T19:26:46,499 copying multiqc/modules/kat/__init__.py -> build/lib/multiqc/modules/kat 2024-05-31T19:26:46,501 copying multiqc/modules/kat/kat.py -> build/lib/multiqc/modules/kat 2024-05-31T19:26:46,504 creating build/lib/multiqc/modules/kraken 2024-05-31T19:26:46,505 copying multiqc/modules/kraken/__init__.py -> build/lib/multiqc/modules/kraken 2024-05-31T19:26:46,507 copying multiqc/modules/kraken/kraken.py -> build/lib/multiqc/modules/kraken 2024-05-31T19:26:46,510 creating build/lib/multiqc/modules/leehom 2024-05-31T19:26:46,510 copying multiqc/modules/leehom/__init__.py -> build/lib/multiqc/modules/leehom 2024-05-31T19:26:46,512 copying multiqc/modules/leehom/leehom.py -> build/lib/multiqc/modules/leehom 2024-05-31T19:26:46,514 creating build/lib/multiqc/modules/librarian 2024-05-31T19:26:46,515 copying multiqc/modules/librarian/__init__.py -> build/lib/multiqc/modules/librarian 2024-05-31T19:26:46,517 copying multiqc/modules/librarian/librarian.py -> build/lib/multiqc/modules/librarian 2024-05-31T19:26:46,520 creating build/lib/multiqc/modules/lima 2024-05-31T19:26:46,520 copying multiqc/modules/lima/__init__.py -> build/lib/multiqc/modules/lima 2024-05-31T19:26:46,522 copying multiqc/modules/lima/lima.py -> build/lib/multiqc/modules/lima 2024-05-31T19:26:46,525 creating build/lib/multiqc/modules/longranger 2024-05-31T19:26:46,526 copying multiqc/modules/longranger/__init__.py -> build/lib/multiqc/modules/longranger 2024-05-31T19:26:46,528 copying multiqc/modules/longranger/longranger.py -> build/lib/multiqc/modules/longranger 2024-05-31T19:26:46,530 creating build/lib/multiqc/modules/macs2 2024-05-31T19:26:46,531 copying multiqc/modules/macs2/__init__.py -> build/lib/multiqc/modules/macs2 2024-05-31T19:26:46,534 copying multiqc/modules/macs2/macs2.py -> build/lib/multiqc/modules/macs2 2024-05-31T19:26:46,536 creating build/lib/multiqc/modules/malt 2024-05-31T19:26:46,537 copying multiqc/modules/malt/__init__.py -> build/lib/multiqc/modules/malt 2024-05-31T19:26:46,539 copying multiqc/modules/malt/malt.py -> build/lib/multiqc/modules/malt 2024-05-31T19:26:46,541 creating build/lib/multiqc/modules/mapdamage 2024-05-31T19:26:46,542 copying multiqc/modules/mapdamage/__init__.py -> build/lib/multiqc/modules/mapdamage 2024-05-31T19:26:46,545 copying multiqc/modules/mapdamage/mapdamage.py -> build/lib/multiqc/modules/mapdamage 2024-05-31T19:26:46,547 creating build/lib/multiqc/modules/megahit 2024-05-31T19:26:46,548 copying multiqc/modules/megahit/__init__.py -> build/lib/multiqc/modules/megahit 2024-05-31T19:26:46,550 copying multiqc/modules/megahit/megahit.py -> build/lib/multiqc/modules/megahit 2024-05-31T19:26:46,552 creating build/lib/multiqc/modules/metaphlan 2024-05-31T19:26:46,553 copying multiqc/modules/metaphlan/__init__.py -> build/lib/multiqc/modules/metaphlan 2024-05-31T19:26:46,555 copying multiqc/modules/metaphlan/metaphlan.py -> build/lib/multiqc/modules/metaphlan 2024-05-31T19:26:46,558 creating build/lib/multiqc/modules/methylqa 2024-05-31T19:26:46,559 copying multiqc/modules/methylqa/__init__.py -> build/lib/multiqc/modules/methylqa 2024-05-31T19:26:46,560 copying multiqc/modules/methylqa/methylqa.py -> build/lib/multiqc/modules/methylqa 2024-05-31T19:26:46,563 creating build/lib/multiqc/modules/minionqc 2024-05-31T19:26:46,564 copying multiqc/modules/minionqc/__init__.py -> build/lib/multiqc/modules/minionqc 2024-05-31T19:26:46,566 copying multiqc/modules/minionqc/minionqc.py -> build/lib/multiqc/modules/minionqc 2024-05-31T19:26:46,568 creating build/lib/multiqc/modules/mirtop 2024-05-31T19:26:46,569 copying multiqc/modules/mirtop/__init__.py -> build/lib/multiqc/modules/mirtop 2024-05-31T19:26:46,571 copying multiqc/modules/mirtop/mirtop.py -> build/lib/multiqc/modules/mirtop 2024-05-31T19:26:46,573 creating build/lib/multiqc/modules/mirtrace 2024-05-31T19:26:46,574 copying multiqc/modules/mirtrace/__init__.py -> build/lib/multiqc/modules/mirtrace 2024-05-31T19:26:46,576 copying multiqc/modules/mirtrace/mirtrace.py -> build/lib/multiqc/modules/mirtrace 2024-05-31T19:26:46,579 creating build/lib/multiqc/modules/mosdepth 2024-05-31T19:26:46,580 copying multiqc/modules/mosdepth/__init__.py -> build/lib/multiqc/modules/mosdepth 2024-05-31T19:26:46,582 copying multiqc/modules/mosdepth/mosdepth.py -> build/lib/multiqc/modules/mosdepth 2024-05-31T19:26:46,585 creating build/lib/multiqc/modules/motus 2024-05-31T19:26:46,585 copying multiqc/modules/motus/__init__.py -> build/lib/multiqc/modules/motus 2024-05-31T19:26:46,587 copying multiqc/modules/motus/motus.py -> build/lib/multiqc/modules/motus 2024-05-31T19:26:46,590 creating build/lib/multiqc/modules/mtnucratio 2024-05-31T19:26:46,591 copying multiqc/modules/mtnucratio/__init__.py -> build/lib/multiqc/modules/mtnucratio 2024-05-31T19:26:46,593 copying multiqc/modules/mtnucratio/mtnucratio.py -> build/lib/multiqc/modules/mtnucratio 2024-05-31T19:26:46,595 creating build/lib/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:46,596 copying multiqc/modules/multivcfanalyzer/__init__.py -> build/lib/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:46,598 copying multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/lib/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:46,601 creating build/lib/multiqc/modules/nanostat 2024-05-31T19:26:46,601 copying multiqc/modules/nanostat/__init__.py -> build/lib/multiqc/modules/nanostat 2024-05-31T19:26:46,603 copying multiqc/modules/nanostat/nanostat.py -> build/lib/multiqc/modules/nanostat 2024-05-31T19:26:46,606 creating build/lib/multiqc/modules/nextclade 2024-05-31T19:26:46,607 copying multiqc/modules/nextclade/__init__.py -> build/lib/multiqc/modules/nextclade 2024-05-31T19:26:46,609 copying multiqc/modules/nextclade/nextclade.py -> build/lib/multiqc/modules/nextclade 2024-05-31T19:26:46,611 creating build/lib/multiqc/modules/ngsderive 2024-05-31T19:26:46,612 copying multiqc/modules/ngsderive/__init__.py -> build/lib/multiqc/modules/ngsderive 2024-05-31T19:26:46,615 copying multiqc/modules/ngsderive/ngsderive.py -> build/lib/multiqc/modules/ngsderive 2024-05-31T19:26:46,617 creating build/lib/multiqc/modules/nonpareil 2024-05-31T19:26:46,619 copying multiqc/modules/nonpareil/__init__.py -> build/lib/multiqc/modules/nonpareil 2024-05-31T19:26:46,621 copying multiqc/modules/nonpareil/nonpareil.py -> build/lib/multiqc/modules/nonpareil 2024-05-31T19:26:46,623 creating build/lib/multiqc/modules/odgi 2024-05-31T19:26:46,624 copying multiqc/modules/odgi/__init__.py -> build/lib/multiqc/modules/odgi 2024-05-31T19:26:46,626 copying multiqc/modules/odgi/odgi.py -> build/lib/multiqc/modules/odgi 2024-05-31T19:26:46,629 creating build/lib/multiqc/modules/optitype 2024-05-31T19:26:46,630 copying multiqc/modules/optitype/__init__.py -> build/lib/multiqc/modules/optitype 2024-05-31T19:26:46,632 copying multiqc/modules/optitype/optitype.py -> build/lib/multiqc/modules/optitype 2024-05-31T19:26:46,635 creating build/lib/multiqc/modules/pangolin 2024-05-31T19:26:46,636 copying multiqc/modules/pangolin/__init__.py -> build/lib/multiqc/modules/pangolin 2024-05-31T19:26:46,637 copying multiqc/modules/pangolin/pangolin.py -> build/lib/multiqc/modules/pangolin 2024-05-31T19:26:46,640 creating build/lib/multiqc/modules/pbmarkdup 2024-05-31T19:26:46,640 copying multiqc/modules/pbmarkdup/__init__.py -> build/lib/multiqc/modules/pbmarkdup 2024-05-31T19:26:46,642 copying multiqc/modules/pbmarkdup/pbmarkdup.py -> build/lib/multiqc/modules/pbmarkdup 2024-05-31T19:26:46,645 creating build/lib/multiqc/modules/peddy 2024-05-31T19:26:46,646 copying multiqc/modules/peddy/__init__.py -> build/lib/multiqc/modules/peddy 2024-05-31T19:26:46,647 copying multiqc/modules/peddy/peddy.py -> build/lib/multiqc/modules/peddy 2024-05-31T19:26:46,650 creating build/lib/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:46,651 copying multiqc/modules/phantompeakqualtools/__init__.py -> build/lib/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:46,653 copying multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/lib/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:46,655 creating build/lib/multiqc/modules/picard 2024-05-31T19:26:46,656 copying multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,658 copying multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,660 copying multiqc/modules/picard/CrosscheckFingerprints.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,663 copying multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,665 copying multiqc/modules/picard/GcBiasMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,668 copying multiqc/modules/picard/HsMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,670 copying multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,673 copying multiqc/modules/picard/IlluminaLaneMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,675 copying multiqc/modules/picard/InsertSizeMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,678 copying multiqc/modules/picard/MarkDuplicates.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,681 copying multiqc/modules/picard/MarkIlluminaAdapters.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,683 copying multiqc/modules/picard/OxoGMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,685 copying multiqc/modules/picard/QualityByCycleMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,687 copying multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,690 copying multiqc/modules/picard/QualityYieldMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,692 copying multiqc/modules/picard/RnaSeqMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,694 copying multiqc/modules/picard/RrbsSummaryMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,697 copying multiqc/modules/picard/TargetedPcrMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,699 copying multiqc/modules/picard/ValidateSamFile.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,701 copying multiqc/modules/picard/VariantCallingMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,704 copying multiqc/modules/picard/WgsMetrics.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,706 copying multiqc/modules/picard/__init__.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,709 copying multiqc/modules/picard/picard.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,711 copying multiqc/modules/picard/util.py -> build/lib/multiqc/modules/picard 2024-05-31T19:26:46,713 creating build/lib/multiqc/modules/porechop 2024-05-31T19:26:46,714 copying multiqc/modules/porechop/__init__.py -> build/lib/multiqc/modules/porechop 2024-05-31T19:26:46,717 copying multiqc/modules/porechop/porechop.py -> build/lib/multiqc/modules/porechop 2024-05-31T19:26:46,719 creating build/lib/multiqc/modules/preseq 2024-05-31T19:26:46,720 copying multiqc/modules/preseq/__init__.py -> build/lib/multiqc/modules/preseq 2024-05-31T19:26:46,722 copying multiqc/modules/preseq/preseq.py -> build/lib/multiqc/modules/preseq 2024-05-31T19:26:46,724 creating build/lib/multiqc/modules/prinseqplusplus 2024-05-31T19:26:46,725 copying multiqc/modules/prinseqplusplus/__init__.py -> build/lib/multiqc/modules/prinseqplusplus 2024-05-31T19:26:46,727 copying multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/lib/multiqc/modules/prinseqplusplus 2024-05-31T19:26:46,729 creating build/lib/multiqc/modules/prokka 2024-05-31T19:26:46,730 copying multiqc/modules/prokka/__init__.py -> build/lib/multiqc/modules/prokka 2024-05-31T19:26:46,732 copying multiqc/modules/prokka/prokka.py -> build/lib/multiqc/modules/prokka 2024-05-31T19:26:46,734 creating build/lib/multiqc/modules/purple 2024-05-31T19:26:46,735 copying multiqc/modules/purple/__init__.py -> build/lib/multiqc/modules/purple 2024-05-31T19:26:46,737 copying multiqc/modules/purple/purple.py -> build/lib/multiqc/modules/purple 2024-05-31T19:26:46,739 creating build/lib/multiqc/modules/pychopper 2024-05-31T19:26:46,740 copying multiqc/modules/pychopper/__init__.py -> build/lib/multiqc/modules/pychopper 2024-05-31T19:26:46,742 copying multiqc/modules/pychopper/pychopper.py -> build/lib/multiqc/modules/pychopper 2024-05-31T19:26:46,745 creating build/lib/multiqc/modules/pycoqc 2024-05-31T19:26:46,745 copying multiqc/modules/pycoqc/__init__.py -> build/lib/multiqc/modules/pycoqc 2024-05-31T19:26:46,747 copying multiqc/modules/pycoqc/pycoqc.py -> build/lib/multiqc/modules/pycoqc 2024-05-31T19:26:46,750 creating build/lib/multiqc/modules/qc3C 2024-05-31T19:26:46,751 copying multiqc/modules/qc3C/__init__.py -> build/lib/multiqc/modules/qc3C 2024-05-31T19:26:46,753 copying multiqc/modules/qc3C/qc3C.py -> build/lib/multiqc/modules/qc3C 2024-05-31T19:26:46,756 creating build/lib/multiqc/modules/qorts 2024-05-31T19:26:46,757 copying multiqc/modules/qorts/__init__.py -> build/lib/multiqc/modules/qorts 2024-05-31T19:26:46,759 copying multiqc/modules/qorts/qorts.py -> build/lib/multiqc/modules/qorts 2024-05-31T19:26:46,762 creating build/lib/multiqc/modules/qualimap 2024-05-31T19:26:46,763 copying multiqc/modules/qualimap/QM_BamQC.py -> build/lib/multiqc/modules/qualimap 2024-05-31T19:26:46,766 copying multiqc/modules/qualimap/QM_RNASeq.py -> build/lib/multiqc/modules/qualimap 2024-05-31T19:26:46,768 copying multiqc/modules/qualimap/__init__.py -> build/lib/multiqc/modules/qualimap 2024-05-31T19:26:46,770 copying multiqc/modules/qualimap/qualimap.py -> build/lib/multiqc/modules/qualimap 2024-05-31T19:26:46,772 creating build/lib/multiqc/modules/quast 2024-05-31T19:26:46,773 copying multiqc/modules/quast/__init__.py -> build/lib/multiqc/modules/quast 2024-05-31T19:26:46,775 copying multiqc/modules/quast/quast.py -> build/lib/multiqc/modules/quast 2024-05-31T19:26:46,778 creating build/lib/multiqc/modules/rna_seqc 2024-05-31T19:26:46,779 copying multiqc/modules/rna_seqc/__init__.py -> build/lib/multiqc/modules/rna_seqc 2024-05-31T19:26:46,787 copying multiqc/modules/rna_seqc/rna_seqc.py -> build/lib/multiqc/modules/rna_seqc 2024-05-31T19:26:46,790 creating build/lib/multiqc/modules/rockhopper 2024-05-31T19:26:46,791 copying multiqc/modules/rockhopper/__init__.py -> build/lib/multiqc/modules/rockhopper 2024-05-31T19:26:46,793 copying multiqc/modules/rockhopper/rockhopper.py -> build/lib/multiqc/modules/rockhopper 2024-05-31T19:26:46,795 creating build/lib/multiqc/modules/rsem 2024-05-31T19:26:46,796 copying multiqc/modules/rsem/__init__.py -> build/lib/multiqc/modules/rsem 2024-05-31T19:26:46,798 copying multiqc/modules/rsem/rsem.py -> build/lib/multiqc/modules/rsem 2024-05-31T19:26:46,801 creating build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,802 copying multiqc/modules/rseqc/__init__.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,803 copying multiqc/modules/rseqc/bam_stat.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,805 copying multiqc/modules/rseqc/gene_body_coverage.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,808 copying multiqc/modules/rseqc/infer_experiment.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,810 copying multiqc/modules/rseqc/inner_distance.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,811 copying multiqc/modules/rseqc/junction_annotation.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,814 copying multiqc/modules/rseqc/junction_saturation.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,816 copying multiqc/modules/rseqc/read_distribution.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,818 copying multiqc/modules/rseqc/read_duplication.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,820 copying multiqc/modules/rseqc/read_gc.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,822 copying multiqc/modules/rseqc/rseqc.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,824 copying multiqc/modules/rseqc/tin.py -> build/lib/multiqc/modules/rseqc 2024-05-31T19:26:46,826 creating build/lib/multiqc/modules/rseqc/assets 2024-05-31T19:26:46,827 creating build/lib/multiqc/modules/rseqc/assets/js 2024-05-31T19:26:46,828 copying multiqc/modules/rseqc/assets/js/multiqc_rseqc.js -> build/lib/multiqc/modules/rseqc/assets/js 2024-05-31T19:26:46,829 creating build/lib/multiqc/modules/salmon 2024-05-31T19:26:46,830 copying multiqc/modules/salmon/__init__.py -> build/lib/multiqc/modules/salmon 2024-05-31T19:26:46,832 copying multiqc/modules/salmon/salmon.py -> build/lib/multiqc/modules/salmon 2024-05-31T19:26:46,835 creating build/lib/multiqc/modules/sambamba 2024-05-31T19:26:46,836 copying multiqc/modules/sambamba/__init__.py -> build/lib/multiqc/modules/sambamba 2024-05-31T19:26:46,838 copying multiqc/modules/sambamba/markdup.py -> build/lib/multiqc/modules/sambamba 2024-05-31T19:26:46,840 copying multiqc/modules/sambamba/sambamba.py -> build/lib/multiqc/modules/sambamba 2024-05-31T19:26:46,842 creating build/lib/multiqc/modules/samblaster 2024-05-31T19:26:46,843 copying multiqc/modules/samblaster/__init__.py -> build/lib/multiqc/modules/samblaster 2024-05-31T19:26:46,846 copying multiqc/modules/samblaster/samblaster.py -> build/lib/multiqc/modules/samblaster 2024-05-31T19:26:46,848 creating build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,849 copying multiqc/modules/samtools/__init__.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,851 copying multiqc/modules/samtools/coverage.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,853 copying multiqc/modules/samtools/flagstat.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,856 copying multiqc/modules/samtools/idxstats.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,858 copying multiqc/modules/samtools/markdup.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,860 copying multiqc/modules/samtools/rmdup.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,862 copying multiqc/modules/samtools/samtools.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,864 copying multiqc/modules/samtools/stats.py -> build/lib/multiqc/modules/samtools 2024-05-31T19:26:46,867 creating build/lib/multiqc/modules/sargasso 2024-05-31T19:26:46,868 copying multiqc/modules/sargasso/__init__.py -> build/lib/multiqc/modules/sargasso 2024-05-31T19:26:46,870 copying multiqc/modules/sargasso/sargasso.py -> build/lib/multiqc/modules/sargasso 2024-05-31T19:26:46,872 creating build/lib/multiqc/modules/seqera_cli 2024-05-31T19:26:46,873 copying multiqc/modules/seqera_cli/__init__.py -> build/lib/multiqc/modules/seqera_cli 2024-05-31T19:26:46,875 copying multiqc/modules/seqera_cli/seqera_cli.py -> build/lib/multiqc/modules/seqera_cli 2024-05-31T19:26:46,878 creating build/lib/multiqc/modules/sequali 2024-05-31T19:26:46,878 copying multiqc/modules/sequali/__init__.py -> build/lib/multiqc/modules/sequali 2024-05-31T19:26:46,880 copying multiqc/modules/sequali/sequali.py -> build/lib/multiqc/modules/sequali 2024-05-31T19:26:46,883 creating build/lib/multiqc/modules/seqwho 2024-05-31T19:26:46,884 copying multiqc/modules/seqwho/__init__.py -> build/lib/multiqc/modules/seqwho 2024-05-31T19:26:46,886 copying multiqc/modules/seqwho/seqwho.py -> build/lib/multiqc/modules/seqwho 2024-05-31T19:26:46,888 creating build/lib/multiqc/modules/seqyclean 2024-05-31T19:26:46,889 copying multiqc/modules/seqyclean/__init__.py -> build/lib/multiqc/modules/seqyclean 2024-05-31T19:26:46,891 copying multiqc/modules/seqyclean/seqyclean.py -> build/lib/multiqc/modules/seqyclean 2024-05-31T19:26:46,893 creating build/lib/multiqc/modules/sexdeterrmine 2024-05-31T19:26:46,894 copying multiqc/modules/sexdeterrmine/__init__.py -> build/lib/multiqc/modules/sexdeterrmine 2024-05-31T19:26:46,896 copying multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/lib/multiqc/modules/sexdeterrmine 2024-05-31T19:26:46,899 creating build/lib/multiqc/modules/sickle 2024-05-31T19:26:46,899 copying multiqc/modules/sickle/__init__.py -> build/lib/multiqc/modules/sickle 2024-05-31T19:26:46,902 copying multiqc/modules/sickle/sickle.py -> build/lib/multiqc/modules/sickle 2024-05-31T19:26:46,904 creating build/lib/multiqc/modules/skewer 2024-05-31T19:26:46,905 copying multiqc/modules/skewer/__init__.py -> build/lib/multiqc/modules/skewer 2024-05-31T19:26:46,907 copying multiqc/modules/skewer/skewer.py -> build/lib/multiqc/modules/skewer 2024-05-31T19:26:46,909 creating build/lib/multiqc/modules/slamdunk 2024-05-31T19:26:46,910 copying multiqc/modules/slamdunk/__init__.py -> build/lib/multiqc/modules/slamdunk 2024-05-31T19:26:46,912 copying multiqc/modules/slamdunk/slamdunk.py -> build/lib/multiqc/modules/slamdunk 2024-05-31T19:26:46,915 creating build/lib/multiqc/modules/snippy 2024-05-31T19:26:46,915 copying multiqc/modules/snippy/__init__.py -> build/lib/multiqc/modules/snippy 2024-05-31T19:26:46,918 copying multiqc/modules/snippy/snippy.py -> build/lib/multiqc/modules/snippy 2024-05-31T19:26:46,920 creating build/lib/multiqc/modules/snpeff 2024-05-31T19:26:46,921 copying multiqc/modules/snpeff/__init__.py -> build/lib/multiqc/modules/snpeff 2024-05-31T19:26:46,923 copying multiqc/modules/snpeff/snpeff.py -> build/lib/multiqc/modules/snpeff 2024-05-31T19:26:46,925 creating build/lib/multiqc/modules/snpsplit 2024-05-31T19:26:46,926 copying multiqc/modules/snpsplit/__init__.py -> build/lib/multiqc/modules/snpsplit 2024-05-31T19:26:46,928 copying multiqc/modules/snpsplit/snpsplit.py -> build/lib/multiqc/modules/snpsplit 2024-05-31T19:26:46,931 creating build/lib/multiqc/modules/somalier 2024-05-31T19:26:46,932 copying multiqc/modules/somalier/__init__.py -> build/lib/multiqc/modules/somalier 2024-05-31T19:26:46,934 copying multiqc/modules/somalier/somalier.py -> build/lib/multiqc/modules/somalier 2024-05-31T19:26:46,937 creating build/lib/multiqc/modules/sortmerna 2024-05-31T19:26:46,938 copying multiqc/modules/sortmerna/__init__.py -> build/lib/multiqc/modules/sortmerna 2024-05-31T19:26:46,940 copying multiqc/modules/sortmerna/sortmerna.py -> build/lib/multiqc/modules/sortmerna 2024-05-31T19:26:46,943 creating build/lib/multiqc/modules/sourmash 2024-05-31T19:26:46,943 copying multiqc/modules/sourmash/__init__.py -> build/lib/multiqc/modules/sourmash 2024-05-31T19:26:46,946 copying multiqc/modules/sourmash/compare.py -> build/lib/multiqc/modules/sourmash 2024-05-31T19:26:46,948 copying multiqc/modules/sourmash/gather.py -> build/lib/multiqc/modules/sourmash 2024-05-31T19:26:46,951 copying multiqc/modules/sourmash/sourmash.py -> build/lib/multiqc/modules/sourmash 2024-05-31T19:26:46,953 creating build/lib/multiqc/modules/spaceranger 2024-05-31T19:26:46,954 copying multiqc/modules/spaceranger/__init__.py -> build/lib/multiqc/modules/spaceranger 2024-05-31T19:26:46,956 copying multiqc/modules/spaceranger/_utils.py -> build/lib/multiqc/modules/spaceranger 2024-05-31T19:26:46,958 copying multiqc/modules/spaceranger/count.py -> build/lib/multiqc/modules/spaceranger 2024-05-31T19:26:46,960 copying multiqc/modules/spaceranger/spaceranger.py -> build/lib/multiqc/modules/spaceranger 2024-05-31T19:26:46,962 creating build/lib/multiqc/modules/stacks 2024-05-31T19:26:46,963 copying multiqc/modules/stacks/__init__.py -> build/lib/multiqc/modules/stacks 2024-05-31T19:26:46,965 copying multiqc/modules/stacks/stacks.py -> build/lib/multiqc/modules/stacks 2024-05-31T19:26:46,967 creating build/lib/multiqc/modules/star 2024-05-31T19:26:46,968 copying multiqc/modules/star/__init__.py -> build/lib/multiqc/modules/star 2024-05-31T19:26:46,970 copying multiqc/modules/star/star.py -> build/lib/multiqc/modules/star 2024-05-31T19:26:46,972 creating build/lib/multiqc/modules/supernova 2024-05-31T19:26:46,973 copying multiqc/modules/supernova/__init__.py -> build/lib/multiqc/modules/supernova 2024-05-31T19:26:46,976 copying multiqc/modules/supernova/supernova.py -> build/lib/multiqc/modules/supernova 2024-05-31T19:26:46,978 creating build/lib/multiqc/modules/theta2 2024-05-31T19:26:46,979 copying multiqc/modules/theta2/__init__.py -> build/lib/multiqc/modules/theta2 2024-05-31T19:26:46,981 copying multiqc/modules/theta2/theta2.py -> build/lib/multiqc/modules/theta2 2024-05-31T19:26:46,983 creating build/lib/multiqc/modules/tophat 2024-05-31T19:26:46,984 copying multiqc/modules/tophat/__init__.py -> build/lib/multiqc/modules/tophat 2024-05-31T19:26:46,986 copying multiqc/modules/tophat/tophat.py -> build/lib/multiqc/modules/tophat 2024-05-31T19:26:46,988 creating build/lib/multiqc/modules/trimmomatic 2024-05-31T19:26:46,989 copying multiqc/modules/trimmomatic/__init__.py -> build/lib/multiqc/modules/trimmomatic 2024-05-31T19:26:46,991 copying multiqc/modules/trimmomatic/trimmomatic.py -> build/lib/multiqc/modules/trimmomatic 2024-05-31T19:26:46,993 creating build/lib/multiqc/modules/truvari 2024-05-31T19:26:46,994 copying multiqc/modules/truvari/__init__.py -> build/lib/multiqc/modules/truvari 2024-05-31T19:26:46,996 copying multiqc/modules/truvari/bench.py -> build/lib/multiqc/modules/truvari 2024-05-31T19:26:46,999 copying multiqc/modules/truvari/truvari.py -> build/lib/multiqc/modules/truvari 2024-05-31T19:26:47,001 creating build/lib/multiqc/modules/umitools 2024-05-31T19:26:47,001 copying multiqc/modules/umitools/__init__.py -> build/lib/multiqc/modules/umitools 2024-05-31T19:26:47,003 copying multiqc/modules/umitools/umitools.py -> build/lib/multiqc/modules/umitools 2024-05-31T19:26:47,006 creating build/lib/multiqc/modules/varscan2 2024-05-31T19:26:47,007 copying multiqc/modules/varscan2/__init__.py -> build/lib/multiqc/modules/varscan2 2024-05-31T19:26:47,009 copying multiqc/modules/varscan2/varscan2.py -> build/lib/multiqc/modules/varscan2 2024-05-31T19:26:47,011 creating build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,012 copying multiqc/modules/vcftools/__init__.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,014 copying multiqc/modules/vcftools/relatedness2.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,016 copying multiqc/modules/vcftools/tstv_by_count.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,019 copying multiqc/modules/vcftools/tstv_by_qual.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,021 copying multiqc/modules/vcftools/tstv_summary.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,022 copying multiqc/modules/vcftools/vcftools.py -> build/lib/multiqc/modules/vcftools 2024-05-31T19:26:47,024 creating build/lib/multiqc/modules/vep 2024-05-31T19:26:47,025 copying multiqc/modules/vep/__init__.py -> build/lib/multiqc/modules/vep 2024-05-31T19:26:47,027 copying multiqc/modules/vep/vep.py -> build/lib/multiqc/modules/vep 2024-05-31T19:26:47,030 creating build/lib/multiqc/modules/verifybamid 2024-05-31T19:26:47,031 copying multiqc/modules/verifybamid/__init__.py -> build/lib/multiqc/modules/verifybamid 2024-05-31T19:26:47,033 copying multiqc/modules/verifybamid/verifybamid.py -> build/lib/multiqc/modules/verifybamid 2024-05-31T19:26:47,035 creating build/lib/multiqc/modules/whatshap 2024-05-31T19:26:47,036 copying multiqc/modules/whatshap/__init__.py -> build/lib/multiqc/modules/whatshap 2024-05-31T19:26:47,038 copying multiqc/modules/whatshap/whatshap.py -> build/lib/multiqc/modules/whatshap 2024-05-31T19:26:47,041 creating build/lib/multiqc/modules/xengsort 2024-05-31T19:26:47,041 copying multiqc/modules/xengsort/__init__.py -> build/lib/multiqc/modules/xengsort 2024-05-31T19:26:47,043 copying multiqc/modules/xengsort/xengsort.py -> build/lib/multiqc/modules/xengsort 2024-05-31T19:26:47,045 creating build/lib/multiqc/modules/xenome 2024-05-31T19:26:47,046 copying multiqc/modules/xenome/__init__.py -> build/lib/multiqc/modules/xenome 2024-05-31T19:26:47,048 copying multiqc/modules/xenome/xenome.py -> build/lib/multiqc/modules/xenome 2024-05-31T19:26:47,050 creating build/lib/multiqc/plots 2024-05-31T19:26:47,051 copying multiqc/plots/__init__.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,053 copying multiqc/plots/bargraph.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,056 copying multiqc/plots/box.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,058 copying multiqc/plots/heatmap.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,060 copying multiqc/plots/linegraph.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,062 copying multiqc/plots/scatter.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,065 copying multiqc/plots/table.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,067 copying multiqc/plots/table_object.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,070 copying multiqc/plots/violin.py -> build/lib/multiqc/plots 2024-05-31T19:26:47,072 creating build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,073 copying multiqc/plots/plotly/__init__.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,076 copying multiqc/plots/plotly/bar.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,079 copying multiqc/plots/plotly/box.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,081 copying multiqc/plots/plotly/heatmap.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,084 copying multiqc/plots/plotly/line.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,087 copying multiqc/plots/plotly/plot.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,090 copying multiqc/plots/plotly/scatter.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,093 copying multiqc/plots/plotly/table.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,096 copying multiqc/plots/plotly/violin.py -> build/lib/multiqc/plots/plotly 2024-05-31T19:26:47,099 creating build/lib/multiqc/templates 2024-05-31T19:26:47,101 copying multiqc/templates/__init__.py -> build/lib/multiqc/templates 2024-05-31T19:26:47,103 creating build/lib/multiqc/templates/default 2024-05-31T19:26:47,104 copying multiqc/templates/default/__init__.py -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,106 copying multiqc/templates/default/base.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,108 copying multiqc/templates/default/content.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,111 copying multiqc/templates/default/foot.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,113 copying multiqc/templates/default/footer.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,116 copying multiqc/templates/default/general_stats.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,118 copying multiqc/templates/default/head.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,120 copying multiqc/templates/default/header.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,123 copying multiqc/templates/default/includes.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,126 copying multiqc/templates/default/nav.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,128 copying multiqc/templates/default/toolbox.html -> build/lib/multiqc/templates/default 2024-05-31T19:26:47,131 creating build/lib/multiqc/templates/default/assets 2024-05-31T19:26:47,132 creating build/lib/multiqc/templates/default/assets/css 2024-05-31T19:26:47,133 copying multiqc/templates/default/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/default/assets/css 2024-05-31T19:26:47,139 copying multiqc/templates/default/assets/css/default_multiqc.css -> build/lib/multiqc/templates/default/assets/css 2024-05-31T19:26:47,141 copying multiqc/templates/default/assets/css/jquery.toast.css -> build/lib/multiqc/templates/default/assets/css 2024-05-31T19:26:47,144 creating build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,145 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,148 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,153 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,157 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,160 copying multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/lib/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,163 creating build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,165 copying multiqc/templates/default/assets/img/MultiQC_logo.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,168 copying multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,170 copying multiqc/templates/default/assets/img/favicon-16x16.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,173 copying multiqc/templates/default/assets/img/favicon-32x32.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,175 copying multiqc/templates/default/assets/img/favicon-96x96.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,178 copying multiqc/templates/default/assets/img/seqera_logo.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,181 copying multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/lib/multiqc/templates/default/assets/img 2024-05-31T19:26:47,183 creating build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,184 copying multiqc/templates/default/assets/js/decompress.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,187 copying multiqc/templates/default/assets/js/flat.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,189 copying multiqc/templates/default/assets/js/multiqc.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,191 copying multiqc/templates/default/assets/js/plotting.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,195 copying multiqc/templates/default/assets/js/render.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,197 copying multiqc/templates/default/assets/js/tables.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,200 copying multiqc/templates/default/assets/js/toolbox.js -> build/lib/multiqc/templates/default/assets/js 2024-05-31T19:26:47,204 creating build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,205 copying multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,208 copying multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,212 copying multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,216 copying multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,219 copying multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,222 copying multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,225 copying multiqc/templates/default/assets/js/packages/jszip.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,229 copying multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,231 copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,364 copying multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/lib/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,417 creating build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,418 copying multiqc/templates/default/assets/js/plots/bar.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,420 copying multiqc/templates/default/assets/js/plots/box.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,422 copying multiqc/templates/default/assets/js/plots/heatmap.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,425 copying multiqc/templates/default/assets/js/plots/line.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,427 copying multiqc/templates/default/assets/js/plots/scatter.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,429 copying multiqc/templates/default/assets/js/plots/violin.js -> build/lib/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,432 creating build/lib/multiqc/templates/gathered 2024-05-31T19:26:47,432 copying multiqc/templates/gathered/__init__.py -> build/lib/multiqc/templates/gathered 2024-05-31T19:26:47,435 copying multiqc/templates/gathered/content.html -> build/lib/multiqc/templates/gathered 2024-05-31T19:26:47,437 copying multiqc/templates/gathered/nav.html -> build/lib/multiqc/templates/gathered 2024-05-31T19:26:47,439 creating build/lib/multiqc/templates/geo 2024-05-31T19:26:47,440 copying multiqc/templates/geo/__init__.py -> build/lib/multiqc/templates/geo 2024-05-31T19:26:47,442 copying multiqc/templates/geo/includes.html -> build/lib/multiqc/templates/geo 2024-05-31T19:26:47,444 creating build/lib/multiqc/templates/geo/assets 2024-05-31T19:26:47,445 creating build/lib/multiqc/templates/geo/assets/css 2024-05-31T19:26:47,446 copying multiqc/templates/geo/assets/css/bootstrap.min.css -> build/lib/multiqc/templates/geo/assets/css 2024-05-31T19:26:47,450 creating build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,451 copying multiqc/templates/geo/assets/img/emailme.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,454 copying multiqc/templates/geo/assets/img/flames.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,457 copying multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,460 copying multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,462 copying multiqc/templates/geo/assets/img/hot.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,465 copying multiqc/templates/geo/assets/img/mchammer.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,468 copying multiqc/templates/geo/assets/img/microfab.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,471 copying multiqc/templates/geo/assets/img/new.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,473 copying multiqc/templates/geo/assets/img/new2.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,475 copying multiqc/templates/geo/assets/img/progress.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,477 copying multiqc/templates/geo/assets/img/rainbow.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,480 copying multiqc/templates/geo/assets/img/stars.gif -> build/lib/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,482 creating build/lib/multiqc/templates/sections 2024-05-31T19:26:47,483 copying multiqc/templates/sections/__init__.py -> build/lib/multiqc/templates/sections 2024-05-31T19:26:47,485 copying multiqc/templates/sections/content.html -> build/lib/multiqc/templates/sections 2024-05-31T19:26:47,487 creating build/lib/multiqc/templates/simple 2024-05-31T19:26:47,488 copying multiqc/templates/simple/__init__.py -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,490 copying multiqc/templates/simple/foot.html -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,492 copying multiqc/templates/simple/header.html -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,494 copying multiqc/templates/simple/includes.html -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,495 copying multiqc/templates/simple/nav.html -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,498 copying multiqc/templates/simple/toolbox.html -> build/lib/multiqc/templates/simple 2024-05-31T19:26:47,499 creating build/lib/multiqc/utils 2024-05-31T19:26:47,500 copying multiqc/utils/__init__.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,502 copying multiqc/utils/config.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,504 copying multiqc/utils/megaqc.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,506 copying multiqc/utils/mqc_colour.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,509 copying multiqc/utils/report.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,511 copying multiqc/utils/util_functions.py -> build/lib/multiqc/utils 2024-05-31T19:26:47,521 installing to build/bdist.linux-armv7l/wheel 2024-05-31T19:26:47,521 running install 2024-05-31T19:26:47,545 running install_lib 2024-05-31T19:26:47,550 creating build/bdist.linux-armv7l 2024-05-31T19:26:47,550 creating build/bdist.linux-armv7l/wheel 2024-05-31T19:26:47,552 creating build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:47,553 creating build/bdist.linux-armv7l/wheel/multiqc/templates 2024-05-31T19:26:47,554 creating build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-31T19:26:47,555 copying build/lib/multiqc/templates/sections/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-31T19:26:47,557 copying build/lib/multiqc/templates/sections/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/sections 2024-05-31T19:26:47,559 copying build/lib/multiqc/templates/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates 2024-05-31T19:26:47,561 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,562 copying build/lib/multiqc/templates/default/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,564 copying build/lib/multiqc/templates/default/foot.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,566 copying build/lib/multiqc/templates/default/base.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,568 copying build/lib/multiqc/templates/default/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,570 copying build/lib/multiqc/templates/default/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,572 copying build/lib/multiqc/templates/default/head.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,574 copying build/lib/multiqc/templates/default/header.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,576 copying build/lib/multiqc/templates/default/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,578 copying build/lib/multiqc/templates/default/footer.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,580 copying build/lib/multiqc/templates/default/general_stats.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,583 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets 2024-05-31T19:26:47,584 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,586 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,591 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,594 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2 -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,597 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,599 copying build/lib/multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/fonts 2024-05-31T19:26:47,604 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,606 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,607 copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,686 copying build/lib/multiqc/templates/default/assets/js/packages/FileSaver.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,688 copying build/lib/multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,692 copying build/lib/multiqc/templates/default/assets/js/packages/jquery.toast.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,694 copying build/lib/multiqc/templates/default/assets/js/packages/plotly-2.27.0.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,818 copying build/lib/multiqc/templates/default/assets/js/packages/jquery-ui.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,821 copying build/lib/multiqc/templates/default/assets/js/packages/pako_inflate.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,824 copying build/lib/multiqc/templates/default/assets/js/packages/jszip.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,828 copying build/lib/multiqc/templates/default/assets/js/packages/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,831 copying build/lib/multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/packages 2024-05-31T19:26:47,835 copying build/lib/multiqc/templates/default/assets/js/multiqc.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,837 copying build/lib/multiqc/templates/default/assets/js/toolbox.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,841 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,842 copying build/lib/multiqc/templates/default/assets/js/plots/box.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,844 copying build/lib/multiqc/templates/default/assets/js/plots/bar.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,846 copying build/lib/multiqc/templates/default/assets/js/plots/line.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,848 copying build/lib/multiqc/templates/default/assets/js/plots/heatmap.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,850 copying build/lib/multiqc/templates/default/assets/js/plots/violin.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,853 copying build/lib/multiqc/templates/default/assets/js/plots/scatter.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js/plots 2024-05-31T19:26:47,855 copying build/lib/multiqc/templates/default/assets/js/render.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,857 copying build/lib/multiqc/templates/default/assets/js/decompress.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,859 copying build/lib/multiqc/templates/default/assets/js/tables.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,862 copying build/lib/multiqc/templates/default/assets/js/flat.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,864 copying build/lib/multiqc/templates/default/assets/js/plotting.js -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/js 2024-05-31T19:26:47,867 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-31T19:26:47,868 copying build/lib/multiqc/templates/default/assets/css/jquery.toast.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-31T19:26:47,871 copying build/lib/multiqc/templates/default/assets/css/default_multiqc.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-31T19:26:47,874 copying build/lib/multiqc/templates/default/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/css 2024-05-31T19:26:47,878 creating build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,879 copying build/lib/multiqc/templates/default/assets/img/favicon-32x32.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,882 copying build/lib/multiqc/templates/default/assets/img/favicon-16x16.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,884 copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo_dark.svg -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,886 copying build/lib/multiqc/templates/default/assets/img/seqera_logo_mono.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,888 copying build/lib/multiqc/templates/default/assets/img/favicon-96x96.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,890 copying build/lib/multiqc/templates/default/assets/img/seqera_logo.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,892 copying build/lib/multiqc/templates/default/assets/img/MultiQC_logo.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/default/assets/img 2024-05-31T19:26:47,894 copying build/lib/multiqc/templates/default/toolbox.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/default 2024-05-31T19:26:47,897 creating build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,898 copying build/lib/multiqc/templates/simple/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,899 copying build/lib/multiqc/templates/simple/foot.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,901 copying build/lib/multiqc/templates/simple/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,903 copying build/lib/multiqc/templates/simple/header.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,905 copying build/lib/multiqc/templates/simple/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,906 copying build/lib/multiqc/templates/simple/toolbox.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/simple 2024-05-31T19:26:47,908 creating build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-31T19:26:47,909 copying build/lib/multiqc/templates/gathered/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-31T19:26:47,911 copying build/lib/multiqc/templates/gathered/content.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-31T19:26:47,913 copying build/lib/multiqc/templates/gathered/nav.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/gathered 2024-05-31T19:26:47,915 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-31T19:26:47,916 copying build/lib/multiqc/templates/geo/includes.html -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-31T19:26:47,919 copying build/lib/multiqc/templates/geo/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo 2024-05-31T19:26:47,921 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets 2024-05-31T19:26:47,922 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/css 2024-05-31T19:26:47,923 copying build/lib/multiqc/templates/geo/assets/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/css 2024-05-31T19:26:47,928 creating build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,929 copying build/lib/multiqc/templates/geo/assets/img/hot.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,932 copying build/lib/multiqc/templates/geo/assets/img/new2.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,934 copying build/lib/multiqc/templates/geo/assets/img/mchammer.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,937 copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,940 copying build/lib/multiqc/templates/geo/assets/img/emailme.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,941 copying build/lib/multiqc/templates/geo/assets/img/microfab.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,944 copying build/lib/multiqc/templates/geo/assets/img/flames.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,947 copying build/lib/multiqc/templates/geo/assets/img/glyphicons-halflings-white.png -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,950 copying build/lib/multiqc/templates/geo/assets/img/stars.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,952 copying build/lib/multiqc/templates/geo/assets/img/rainbow.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,954 copying build/lib/multiqc/templates/geo/assets/img/progress.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,956 copying build/lib/multiqc/templates/geo/assets/img/new.gif -> build/bdist.linux-armv7l/wheel/multiqc/templates/geo/assets/img 2024-05-31T19:26:47,958 copying build/lib/multiqc/config_defaults.yaml -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:47,961 creating build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,961 copying build/lib/multiqc/plots/table_object.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,964 creating build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,966 copying build/lib/multiqc/plots/plotly/line.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,969 copying build/lib/multiqc/plots/plotly/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,971 copying build/lib/multiqc/plots/plotly/violin.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,973 copying build/lib/multiqc/plots/plotly/heatmap.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,976 copying build/lib/multiqc/plots/plotly/plot.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,978 copying build/lib/multiqc/plots/plotly/table.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,981 copying build/lib/multiqc/plots/plotly/bar.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,983 copying build/lib/multiqc/plots/plotly/box.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,985 copying build/lib/multiqc/plots/plotly/scatter.py -> build/bdist.linux-armv7l/wheel/multiqc/plots/plotly 2024-05-31T19:26:47,989 copying build/lib/multiqc/plots/linegraph.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,992 copying build/lib/multiqc/plots/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,994 copying build/lib/multiqc/plots/violin.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,996 copying build/lib/multiqc/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:47,998 copying build/lib/multiqc/plots/table.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:48,000 copying build/lib/multiqc/plots/box.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:48,002 copying build/lib/multiqc/plots/scatter.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:48,004 copying build/lib/multiqc/plots/bargraph.py -> build/bdist.linux-armv7l/wheel/multiqc/plots 2024-05-31T19:26:48,006 copying build/lib/multiqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:48,008 copying build/lib/multiqc/config.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:48,011 copying build/lib/multiqc/multiqc.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:48,014 copying build/lib/multiqc/base_module.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:48,019 creating build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-31T19:26:48,020 creating build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-31T19:26:48,021 copying build/lib/multiqc/modules/macs2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-31T19:26:48,023 copying build/lib/multiqc/modules/macs2/macs2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/macs2 2024-05-31T19:26:48,026 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,027 copying build/lib/multiqc/modules/gatk/gatk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,029 copying build/lib/multiqc/modules/gatk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,031 copying build/lib/multiqc/modules/gatk/varianteval.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,033 copying build/lib/multiqc/modules/gatk/analyze_saturation_mutagenesis.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,036 copying build/lib/multiqc/modules/gatk/base_recalibrator.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gatk 2024-05-31T19:26:48,038 creating build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-31T19:26:48,039 copying build/lib/multiqc/modules/longranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-31T19:26:48,041 copying build/lib/multiqc/modules/longranger/longranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/longranger 2024-05-31T19:26:48,044 creating build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-31T19:26:48,044 copying build/lib/multiqc/modules/truvari/truvari.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-31T19:26:48,046 copying build/lib/multiqc/modules/truvari/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-31T19:26:48,047 copying build/lib/multiqc/modules/truvari/bench.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/truvari 2024-05-31T19:26:48,050 creating build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-31T19:26:48,051 copying build/lib/multiqc/modules/minionqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-31T19:26:48,053 copying build/lib/multiqc/modules/minionqc/minionqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/minionqc 2024-05-31T19:26:48,055 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-31T19:26:48,056 copying build/lib/multiqc/modules/rna_seqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-31T19:26:48,058 copying build/lib/multiqc/modules/rna_seqc/rna_seqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rna_seqc 2024-05-31T19:26:48,060 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-31T19:26:48,061 copying build/lib/multiqc/modules/rsem/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-31T19:26:48,063 copying build/lib/multiqc/modules/rsem/rsem.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rsem 2024-05-31T19:26:48,066 creating build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-31T19:26:48,066 copying build/lib/multiqc/modules/clipandmerge/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-31T19:26:48,068 copying build/lib/multiqc/modules/clipandmerge/clipandmerge.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clipandmerge 2024-05-31T19:26:48,071 creating build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:48,072 copying build/lib/multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:48,074 copying build/lib/multiqc/modules/eigenstratdatabasetools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/eigenstratdatabasetools 2024-05-31T19:26:48,076 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-31T19:26:48,077 copying build/lib/multiqc/modules/gopeaks/gopeaks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-31T19:26:48,079 copying build/lib/multiqc/modules/gopeaks/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gopeaks 2024-05-31T19:26:48,081 creating build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-31T19:26:48,082 copying build/lib/multiqc/modules/verifybamid/verifybamid.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-31T19:26:48,085 copying build/lib/multiqc/modules/verifybamid/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/verifybamid 2024-05-31T19:26:48,087 copying build/lib/multiqc/modules/profile_runtime.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-31T19:26:48,090 creating build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-31T19:26:48,091 copying build/lib/multiqc/modules/megahit/megahit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-31T19:26:48,093 copying build/lib/multiqc/modules/megahit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/megahit 2024-05-31T19:26:48,096 creating build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-31T19:26:48,096 copying build/lib/multiqc/modules/prokka/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-31T19:26:48,098 copying build/lib/multiqc/modules/prokka/prokka.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prokka 2024-05-31T19:26:48,101 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-31T19:26:48,102 copying build/lib/multiqc/modules/fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-31T19:26:48,105 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:48,106 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:48,109 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:48,111 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:48,114 copying build/lib/multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/fastqc_theoretical_gc 2024-05-31T19:26:48,117 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets 2024-05-31T19:26:48,119 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/js 2024-05-31T19:26:48,121 copying build/lib/multiqc/modules/fastqc/assets/js/multiqc_fastqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/js 2024-05-31T19:26:48,125 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/css 2024-05-31T19:26:48,126 copying build/lib/multiqc/modules/fastqc/assets/css/multiqc_fastqc.css -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc/assets/css 2024-05-31T19:26:48,128 copying build/lib/multiqc/modules/fastqc/fastqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastqc 2024-05-31T19:26:48,132 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-31T19:26:48,132 copying build/lib/multiqc/modules/nanostat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-31T19:26:48,134 copying build/lib/multiqc/modules/nanostat/nanostat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nanostat 2024-05-31T19:26:48,137 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-31T19:26:48,138 copying build/lib/multiqc/modules/bamtools/bamtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-31T19:26:48,139 copying build/lib/multiqc/modules/bamtools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-31T19:26:48,142 copying build/lib/multiqc/modules/bamtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamtools 2024-05-31T19:26:48,144 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-31T19:26:48,145 copying build/lib/multiqc/modules/bustools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-31T19:26:48,147 copying build/lib/multiqc/modules/bustools/bustools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bustools 2024-05-31T19:26:48,150 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-31T19:26:48,151 copying build/lib/multiqc/modules/ivar/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-31T19:26:48,153 copying build/lib/multiqc/modules/ivar/ivar.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ivar 2024-05-31T19:26:48,156 creating build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-31T19:26:48,156 copying build/lib/multiqc/modules/homer/tagdirectory.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-31T19:26:48,159 copying build/lib/multiqc/modules/homer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-31T19:26:48,160 copying build/lib/multiqc/modules/homer/findpeaks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-31T19:26:48,162 copying build/lib/multiqc/modules/homer/homer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/homer 2024-05-31T19:26:48,164 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-31T19:26:48,165 copying build/lib/multiqc/modules/bracken/bracken.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-31T19:26:48,167 copying build/lib/multiqc/modules/bracken/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bracken 2024-05-31T19:26:48,169 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-31T19:26:48,170 copying build/lib/multiqc/modules/pychopper/pychopper.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-31T19:26:48,172 copying build/lib/multiqc/modules/pychopper/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pychopper 2024-05-31T19:26:48,174 creating build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-31T19:26:48,175 copying build/lib/multiqc/modules/librarian/librarian.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-31T19:26:48,178 copying build/lib/multiqc/modules/librarian/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/librarian 2024-05-31T19:26:48,181 creating build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-31T19:26:48,181 copying build/lib/multiqc/modules/anglerfish/anglerfish.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-31T19:26:48,184 copying build/lib/multiqc/modules/anglerfish/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/anglerfish 2024-05-31T19:26:48,186 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-31T19:26:48,187 copying build/lib/multiqc/modules/mirtrace/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-31T19:26:48,189 copying build/lib/multiqc/modules/mirtrace/mirtrace.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtrace 2024-05-31T19:26:48,192 creating build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-31T19:26:48,193 copying build/lib/multiqc/modules/theta2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-31T19:26:48,195 copying build/lib/multiqc/modules/theta2/theta2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/theta2 2024-05-31T19:26:48,197 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-31T19:26:48,198 copying build/lib/multiqc/modules/bismark/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-31T19:26:48,200 copying build/lib/multiqc/modules/bismark/bismark.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bismark 2024-05-31T19:26:48,203 creating build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-31T19:26:48,204 copying build/lib/multiqc/modules/supernova/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-31T19:26:48,206 copying build/lib/multiqc/modules/supernova/supernova.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/supernova 2024-05-31T19:26:48,209 creating build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-31T19:26:48,210 copying build/lib/multiqc/modules/goleft_indexcov/goleft_indexcov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-31T19:26:48,213 copying build/lib/multiqc/modules/goleft_indexcov/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/goleft_indexcov 2024-05-31T19:26:48,215 creating build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-31T19:26:48,216 copying build/lib/multiqc/modules/quast/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-31T19:26:48,219 copying build/lib/multiqc/modules/quast/quast.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/quast 2024-05-31T19:26:48,221 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-31T19:26:48,222 copying build/lib/multiqc/modules/hisat2/hisat2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-31T19:26:48,224 copying build/lib/multiqc/modules/hisat2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hisat2 2024-05-31T19:26:48,227 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-31T19:26:48,228 copying build/lib/multiqc/modules/ngsderive/ngsderive.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-31T19:26:48,231 copying build/lib/multiqc/modules/ngsderive/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ngsderive 2024-05-31T19:26:48,233 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-31T19:26:48,234 copying build/lib/multiqc/modules/sambamba/markdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-31T19:26:48,236 copying build/lib/multiqc/modules/sambamba/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-31T19:26:48,238 copying build/lib/multiqc/modules/sambamba/sambamba.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sambamba 2024-05-31T19:26:48,240 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-31T19:26:48,241 copying build/lib/multiqc/modules/biscuit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-31T19:26:48,243 copying build/lib/multiqc/modules/biscuit/biscuit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biscuit 2024-05-31T19:26:48,246 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-31T19:26:48,247 copying build/lib/multiqc/modules/hops/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-31T19:26:48,250 copying build/lib/multiqc/modules/hops/hops.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hops 2024-05-31T19:26:48,252 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-31T19:26:48,254 copying build/lib/multiqc/modules/mtnucratio/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-31T19:26:48,256 copying build/lib/multiqc/modules/mtnucratio/mtnucratio.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mtnucratio 2024-05-31T19:26:48,259 creating build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-31T19:26:48,260 copying build/lib/multiqc/modules/disambiguate/disambiguate.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-31T19:26:48,262 copying build/lib/multiqc/modules/disambiguate/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/disambiguate 2024-05-31T19:26:48,264 creating build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-31T19:26:48,265 copying build/lib/multiqc/modules/filtlong/filtlong.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-31T19:26:48,267 copying build/lib/multiqc/modules/filtlong/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/filtlong 2024-05-31T19:26:48,270 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-31T19:26:48,271 copying build/lib/multiqc/modules/sequali/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-31T19:26:48,273 copying build/lib/multiqc/modules/sequali/sequali.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sequali 2024-05-31T19:26:48,276 creating build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-31T19:26:48,277 copying build/lib/multiqc/modules/peddy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-31T19:26:48,279 copying build/lib/multiqc/modules/peddy/peddy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/peddy 2024-05-31T19:26:48,282 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-31T19:26:48,283 copying build/lib/multiqc/modules/kallisto/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-31T19:26:48,285 copying build/lib/multiqc/modules/kallisto/kallisto.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kallisto 2024-05-31T19:26:48,288 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-31T19:26:48,288 copying build/lib/multiqc/modules/qc3C/qc3C.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-31T19:26:48,291 copying build/lib/multiqc/modules/qc3C/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qc3C 2024-05-31T19:26:48,294 creating build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-31T19:26:48,295 copying build/lib/multiqc/modules/isoseq/isoseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-31T19:26:48,297 copying build/lib/multiqc/modules/isoseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/isoseq 2024-05-31T19:26:48,299 creating build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-31T19:26:48,300 copying build/lib/multiqc/modules/malt/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-31T19:26:48,302 copying build/lib/multiqc/modules/malt/malt.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/malt 2024-05-31T19:26:48,304 creating build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-31T19:26:48,305 copying build/lib/multiqc/modules/leehom/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-31T19:26:48,307 copying build/lib/multiqc/modules/leehom/leehom.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/leehom 2024-05-31T19:26:48,309 creating build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-31T19:26:48,310 copying build/lib/multiqc/modules/star/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-31T19:26:48,312 copying build/lib/multiqc/modules/star/star.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/star 2024-05-31T19:26:48,315 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-31T19:26:48,316 copying build/lib/multiqc/modules/bcl2fastq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-31T19:26:48,317 copying build/lib/multiqc/modules/bcl2fastq/bcl2fastq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcl2fastq 2024-05-31T19:26:48,320 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-31T19:26:48,321 copying build/lib/multiqc/modules/qualimap/QM_BamQC.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-31T19:26:48,324 copying build/lib/multiqc/modules/qualimap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-31T19:26:48,326 copying build/lib/multiqc/modules/qualimap/qualimap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-31T19:26:48,328 copying build/lib/multiqc/modules/qualimap/QM_RNASeq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qualimap 2024-05-31T19:26:48,331 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-31T19:26:48,332 copying build/lib/multiqc/modules/bamdst/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-31T19:26:48,334 copying build/lib/multiqc/modules/bamdst/bamdst.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bamdst 2024-05-31T19:26:48,337 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-31T19:26:48,338 copying build/lib/multiqc/modules/rockhopper/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-31T19:26:48,340 copying build/lib/multiqc/modules/rockhopper/rockhopper.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rockhopper 2024-05-31T19:26:48,343 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,344 copying build/lib/multiqc/modules/rseqc/junction_saturation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,346 copying build/lib/multiqc/modules/rseqc/inner_distance.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,349 copying build/lib/multiqc/modules/rseqc/junction_annotation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,350 copying build/lib/multiqc/modules/rseqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,352 copying build/lib/multiqc/modules/rseqc/rseqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,354 copying build/lib/multiqc/modules/rseqc/tin.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,356 copying build/lib/multiqc/modules/rseqc/read_distribution.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,358 copying build/lib/multiqc/modules/rseqc/gene_body_coverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,360 copying build/lib/multiqc/modules/rseqc/bam_stat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,363 copying build/lib/multiqc/modules/rseqc/read_duplication.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,364 copying build/lib/multiqc/modules/rseqc/read_gc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,367 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets 2024-05-31T19:26:48,368 creating build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets/js 2024-05-31T19:26:48,369 copying build/lib/multiqc/modules/rseqc/assets/js/multiqc_rseqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc/assets/js 2024-05-31T19:26:48,371 copying build/lib/multiqc/modules/rseqc/infer_experiment.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/rseqc 2024-05-31T19:26:48,373 creating build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-31T19:26:48,374 copying build/lib/multiqc/modules/lima/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-31T19:26:48,376 copying build/lib/multiqc/modules/lima/lima.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/lima 2024-05-31T19:26:48,379 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-31T19:26:48,380 copying build/lib/multiqc/modules/seqera_cli/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-31T19:26:48,383 copying build/lib/multiqc/modules/seqera_cli/seqera_cli.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqera_cli 2024-05-31T19:26:48,387 creating build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,388 copying build/lib/multiqc/modules/picard/IlluminaLaneMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,391 copying build/lib/multiqc/modules/picard/InsertSizeMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,393 copying build/lib/multiqc/modules/picard/RrbsSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,396 copying build/lib/multiqc/modules/picard/QualityYieldMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,398 copying build/lib/multiqc/modules/picard/ExtractIlluminaBarcodes.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,400 copying build/lib/multiqc/modules/picard/ValidateSamFile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,403 copying build/lib/multiqc/modules/picard/VariantCallingMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,406 copying build/lib/multiqc/modules/picard/HsMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,409 copying build/lib/multiqc/modules/picard/RnaSeqMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,412 copying build/lib/multiqc/modules/picard/BaseDistributionByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,415 copying build/lib/multiqc/modules/picard/TargetedPcrMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,418 copying build/lib/multiqc/modules/picard/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,420 copying build/lib/multiqc/modules/picard/QualityByCycleMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,422 copying build/lib/multiqc/modules/picard/OxoGMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,424 copying build/lib/multiqc/modules/picard/AlignmentSummaryMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,427 copying build/lib/multiqc/modules/picard/QualityScoreDistributionMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,429 copying build/lib/multiqc/modules/picard/picard.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,431 copying build/lib/multiqc/modules/picard/MarkDuplicates.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,434 copying build/lib/multiqc/modules/picard/MarkIlluminaAdapters.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,437 copying build/lib/multiqc/modules/picard/IlluminaBasecallingMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,439 copying build/lib/multiqc/modules/picard/GcBiasMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,442 copying build/lib/multiqc/modules/picard/CrosscheckFingerprints.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,446 copying build/lib/multiqc/modules/picard/WgsMetrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,448 copying build/lib/multiqc/modules/picard/util.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/picard 2024-05-31T19:26:48,452 creating build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,453 copying build/lib/multiqc/modules/cellranger/cellranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,456 copying build/lib/multiqc/modules/cellranger/vdj.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,459 copying build/lib/multiqc/modules/cellranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,462 copying build/lib/multiqc/modules/cellranger/utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,464 copying build/lib/multiqc/modules/cellranger/count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cellranger 2024-05-31T19:26:48,467 creating build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-31T19:26:48,469 copying build/lib/multiqc/modules/cutadapt/cutadapt.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-31T19:26:48,472 copying build/lib/multiqc/modules/cutadapt/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/cutadapt 2024-05-31T19:26:48,475 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-31T19:26:48,476 copying build/lib/multiqc/modules/kat/kat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-31T19:26:48,479 copying build/lib/multiqc/modules/kat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kat 2024-05-31T19:26:48,481 creating build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-31T19:26:48,482 copying build/lib/multiqc/modules/optitype/optitype.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-31T19:26:48,484 copying build/lib/multiqc/modules/optitype/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/optitype 2024-05-31T19:26:48,486 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-31T19:26:48,487 copying build/lib/multiqc/modules/fastq_screen/fastq_screen.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-31T19:26:48,490 copying build/lib/multiqc/modules/fastq_screen/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastq_screen 2024-05-31T19:26:48,492 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-31T19:26:48,493 copying build/lib/multiqc/modules/snippy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-31T19:26:48,495 copying build/lib/multiqc/modules/snippy/snippy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snippy 2024-05-31T19:26:48,498 creating build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-31T19:26:48,499 copying build/lib/multiqc/modules/umitools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-31T19:26:48,501 copying build/lib/multiqc/modules/umitools/umitools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/umitools 2024-05-31T19:26:48,504 creating build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-31T19:26:48,505 copying build/lib/multiqc/modules/flash/flash.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-31T19:26:48,508 copying build/lib/multiqc/modules/flash/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flash 2024-05-31T19:26:48,510 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-31T19:26:48,510 copying build/lib/multiqc/modules/hicpro/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-31T19:26:48,512 copying build/lib/multiqc/modules/hicpro/hicpro.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicpro 2024-05-31T19:26:48,515 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-31T19:26:48,516 copying build/lib/multiqc/modules/sortmerna/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-31T19:26:48,518 copying build/lib/multiqc/modules/sortmerna/sortmerna.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sortmerna 2024-05-31T19:26:48,520 copying build/lib/multiqc/modules/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-31T19:26:48,522 creating build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:48,523 copying build/lib/multiqc/modules/multivcfanalyzer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:48,525 copying build/lib/multiqc/modules/multivcfanalyzer/multivcfanalyzer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/multivcfanalyzer 2024-05-31T19:26:48,527 creating build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-31T19:26:48,528 copying build/lib/multiqc/modules/somalier/somalier.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-31T19:26:48,531 copying build/lib/multiqc/modules/somalier/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/somalier 2024-05-31T19:26:48,533 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-31T19:26:48,534 copying build/lib/multiqc/modules/sexdeterrmine/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-31T19:26:48,536 copying build/lib/multiqc/modules/sexdeterrmine/sexdeterrmine.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sexdeterrmine 2024-05-31T19:26:48,538 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-31T19:26:48,539 copying build/lib/multiqc/modules/mirtop/mirtop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-31T19:26:48,542 copying build/lib/multiqc/modules/mirtop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mirtop 2024-05-31T19:26:48,544 creating build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-31T19:26:48,545 copying build/lib/multiqc/modules/freyja/freyja.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-31T19:26:48,547 copying build/lib/multiqc/modules/freyja/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/freyja 2024-05-31T19:26:48,550 creating build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-31T19:26:48,551 copying build/lib/multiqc/modules/clusterflow/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-31T19:26:48,552 copying build/lib/multiqc/modules/clusterflow/clusterflow.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/clusterflow 2024-05-31T19:26:48,555 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-31T19:26:48,556 copying build/lib/multiqc/modules/bcftools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-31T19:26:48,559 copying build/lib/multiqc/modules/bcftools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-31T19:26:48,560 copying build/lib/multiqc/modules/bcftools/bcftools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bcftools 2024-05-31T19:26:48,562 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-31T19:26:48,563 copying build/lib/multiqc/modules/sargasso/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-31T19:26:48,565 copying build/lib/multiqc/modules/sargasso/sargasso.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sargasso 2024-05-31T19:26:48,567 creating build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-31T19:26:48,568 copying build/lib/multiqc/modules/qorts/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-31T19:26:48,570 copying build/lib/multiqc/modules/qorts/qorts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/qorts 2024-05-31T19:26:48,573 creating build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-31T19:26:48,573 copying build/lib/multiqc/modules/whatshap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-31T19:26:48,575 copying build/lib/multiqc/modules/whatshap/whatshap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/whatshap 2024-05-31T19:26:48,578 creating build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-31T19:26:48,579 copying build/lib/multiqc/modules/motus/motus.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-31T19:26:48,582 copying build/lib/multiqc/modules/motus/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/motus 2024-05-31T19:26:48,584 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-31T19:26:48,585 copying build/lib/multiqc/modules/kraken/kraken.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-31T19:26:48,588 copying build/lib/multiqc/modules/kraken/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kraken 2024-05-31T19:26:48,590 creating build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-31T19:26:48,591 copying build/lib/multiqc/modules/spaceranger/_utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-31T19:26:48,593 copying build/lib/multiqc/modules/spaceranger/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-31T19:26:48,596 copying build/lib/multiqc/modules/spaceranger/count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-31T19:26:48,598 copying build/lib/multiqc/modules/spaceranger/spaceranger.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/spaceranger 2024-05-31T19:26:48,601 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-31T19:26:48,602 copying build/lib/multiqc/modules/hifiasm/hifiasm.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-31T19:26:48,604 copying build/lib/multiqc/modules/hifiasm/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hifiasm 2024-05-31T19:26:48,607 creating build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-31T19:26:48,608 copying build/lib/multiqc/modules/methylqa/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-31T19:26:48,610 copying build/lib/multiqc/modules/methylqa/methylqa.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/methylqa 2024-05-31T19:26:48,613 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-31T19:26:48,615 copying build/lib/multiqc/modules/biobambam2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-31T19:26:48,617 copying build/lib/multiqc/modules/biobambam2/biobambam2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobambam2 2024-05-31T19:26:48,619 creating build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-31T19:26:48,620 copying build/lib/multiqc/modules/tophat/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-31T19:26:48,622 copying build/lib/multiqc/modules/tophat/tophat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/tophat 2024-05-31T19:26:48,625 creating build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-31T19:26:48,626 copying build/lib/multiqc/modules/xenome/xenome.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-31T19:26:48,629 copying build/lib/multiqc/modules/xenome/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xenome 2024-05-31T19:26:48,631 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-31T19:26:48,632 copying build/lib/multiqc/modules/seqyclean/seqyclean.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-31T19:26:48,635 copying build/lib/multiqc/modules/seqyclean/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqyclean 2024-05-31T19:26:48,637 creating build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-31T19:26:48,638 copying build/lib/multiqc/modules/preseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-31T19:26:48,640 copying build/lib/multiqc/modules/preseq/preseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/preseq 2024-05-31T19:26:48,643 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-31T19:26:48,645 copying build/lib/multiqc/modules/bbduk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-31T19:26:48,647 copying build/lib/multiqc/modules/bbduk/bbduk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbduk 2024-05-31T19:26:48,649 creating build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,650 copying build/lib/multiqc/modules/vcftools/tstv_by_qual.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,652 copying build/lib/multiqc/modules/vcftools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,654 copying build/lib/multiqc/modules/vcftools/tstv_summary.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,656 copying build/lib/multiqc/modules/vcftools/relatedness2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,657 copying build/lib/multiqc/modules/vcftools/tstv_by_count.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,659 copying build/lib/multiqc/modules/vcftools/vcftools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vcftools 2024-05-31T19:26:48,661 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-31T19:26:48,662 copying build/lib/multiqc/modules/nonpareil/nonpareil.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-31T19:26:48,665 copying build/lib/multiqc/modules/nonpareil/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nonpareil 2024-05-31T19:26:48,667 creating build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-31T19:26:48,668 copying build/lib/multiqc/modules/vep/vep.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-31T19:26:48,670 copying build/lib/multiqc/modules/vep/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/vep 2024-05-31T19:26:48,672 creating build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-31T19:26:48,673 copying build/lib/multiqc/modules/adapterremoval/adapterremoval.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-31T19:26:48,676 copying build/lib/multiqc/modules/adapterremoval/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/adapterremoval 2024-05-31T19:26:48,678 creating build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-31T19:26:48,679 copying build/lib/multiqc/modules/seqwho/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-31T19:26:48,681 copying build/lib/multiqc/modules/seqwho/seqwho.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/seqwho 2024-05-31T19:26:48,683 creating build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-31T19:26:48,684 copying build/lib/multiqc/modules/featureCounts/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-31T19:26:48,686 copying build/lib/multiqc/modules/featureCounts/feature_counts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/featureCounts 2024-05-31T19:26:48,688 creating build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-31T19:26:48,689 copying build/lib/multiqc/modules/varscan2/varscan2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-31T19:26:48,691 copying build/lib/multiqc/modules/varscan2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/varscan2 2024-05-31T19:26:48,693 creating build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-31T19:26:48,694 copying build/lib/multiqc/modules/slamdunk/slamdunk.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-31T19:26:48,696 copying build/lib/multiqc/modules/slamdunk/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/slamdunk 2024-05-31T19:26:48,698 creating build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-31T19:26:48,699 copying build/lib/multiqc/modules/salmon/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-31T19:26:48,701 copying build/lib/multiqc/modules/salmon/salmon.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/salmon 2024-05-31T19:26:48,704 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-31T19:26:48,705 copying build/lib/multiqc/modules/sickle/sickle.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-31T19:26:48,707 copying build/lib/multiqc/modules/sickle/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sickle 2024-05-31T19:26:48,709 creating build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,710 copying build/lib/multiqc/modules/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,712 copying build/lib/multiqc/modules/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,714 copying build/lib/multiqc/modules/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,717 copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeTable.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,719 copying build/lib/multiqc/modules/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,720 copying build/lib/multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,722 copying build/lib/multiqc/modules/deeptools/plotCorrelation.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,724 copying build/lib/multiqc/modules/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,726 copying build/lib/multiqc/modules/deeptools/plotEnrichment.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,728 copying build/lib/multiqc/modules/deeptools/deeptools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,730 copying build/lib/multiqc/modules/deeptools/estimateReadFiltering.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/deeptools 2024-05-31T19:26:48,733 creating build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,734 copying build/lib/multiqc/modules/samtools/coverage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,736 copying build/lib/multiqc/modules/samtools/flagstat.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,738 copying build/lib/multiqc/modules/samtools/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,741 copying build/lib/multiqc/modules/samtools/rmdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,742 copying build/lib/multiqc/modules/samtools/markdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,744 copying build/lib/multiqc/modules/samtools/samtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,746 copying build/lib/multiqc/modules/samtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,748 copying build/lib/multiqc/modules/samtools/idxstats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samtools 2024-05-31T19:26:48,750 creating build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-31T19:26:48,751 copying build/lib/multiqc/modules/purple/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-31T19:26:48,752 copying build/lib/multiqc/modules/purple/purple.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/purple 2024-05-31T19:26:48,755 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-31T19:26:48,756 copying build/lib/multiqc/modules/bowtie1/bowtie1.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-31T19:26:48,758 copying build/lib/multiqc/modules/bowtie1/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie1 2024-05-31T19:26:48,760 creating build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-31T19:26:48,761 copying build/lib/multiqc/modules/samblaster/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-31T19:26:48,763 copying build/lib/multiqc/modules/samblaster/samblaster.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/samblaster 2024-05-31T19:26:48,765 creating build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-31T19:26:48,766 copying build/lib/multiqc/modules/sourmash/compare.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-31T19:26:48,768 copying build/lib/multiqc/modules/sourmash/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-31T19:26:48,770 copying build/lib/multiqc/modules/sourmash/gather.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-31T19:26:48,772 copying build/lib/multiqc/modules/sourmash/sourmash.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/sourmash 2024-05-31T19:26:48,775 creating build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-31T19:26:48,776 copying build/lib/multiqc/modules/interop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-31T19:26:48,778 copying build/lib/multiqc/modules/interop/interop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/interop 2024-05-31T19:26:48,781 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-31T19:26:48,781 copying build/lib/multiqc/modules/hicexplorer/hicexplorer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-31T19:26:48,784 copying build/lib/multiqc/modules/hicexplorer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicexplorer 2024-05-31T19:26:48,786 creating build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-31T19:26:48,787 copying build/lib/multiqc/modules/gffcompare/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-31T19:26:48,789 copying build/lib/multiqc/modules/gffcompare/gffcompare.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/gffcompare 2024-05-31T19:26:48,792 creating build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-31T19:26:48,793 copying build/lib/multiqc/modules/odgi/odgi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-31T19:26:48,796 copying build/lib/multiqc/modules/odgi/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/odgi 2024-05-31T19:26:48,802 creating build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-31T19:26:48,802 copying build/lib/multiqc/modules/conpair/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-31T19:26:48,804 copying build/lib/multiqc/modules/conpair/conpair.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/conpair 2024-05-31T19:26:48,807 creating build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-31T19:26:48,807 copying build/lib/multiqc/modules/flexbar/flexbar.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-31T19:26:48,810 copying build/lib/multiqc/modules/flexbar/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/flexbar 2024-05-31T19:26:48,812 creating build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-31T19:26:48,812 copying build/lib/multiqc/modules/diamond/diamond.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-31T19:26:48,814 copying build/lib/multiqc/modules/diamond/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/diamond 2024-05-31T19:26:48,816 creating build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-31T19:26:48,817 copying build/lib/multiqc/modules/jcvi/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-31T19:26:48,819 copying build/lib/multiqc/modules/jcvi/jcvi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jcvi 2024-05-31T19:26:48,821 creating build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-31T19:26:48,822 copying build/lib/multiqc/modules/happy/happy.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-31T19:26:48,825 copying build/lib/multiqc/modules/happy/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/happy 2024-05-31T19:26:48,827 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-31T19:26:48,827 copying build/lib/multiqc/modules/mapdamage/mapdamage.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-31T19:26:48,830 copying build/lib/multiqc/modules/mapdamage/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mapdamage 2024-05-31T19:26:48,832 creating build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-31T19:26:48,833 copying build/lib/multiqc/modules/damageprofiler/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-31T19:26:48,835 copying build/lib/multiqc/modules/damageprofiler/damageprofiler.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/damageprofiler 2024-05-31T19:26:48,838 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,839 copying build/lib/multiqc/modules/bbmap/plot_mhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,840 copying build/lib/multiqc/modules/bbmap/plot_indelhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,842 copying build/lib/multiqc/modules/bbmap/plot_aqhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,844 copying build/lib/multiqc/modules/bbmap/plot_qchist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,846 copying build/lib/multiqc/modules/bbmap/plot_idhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,848 copying build/lib/multiqc/modules/bbmap/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,849 copying build/lib/multiqc/modules/bbmap/bbmap_filetypes.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,852 copying build/lib/multiqc/modules/bbmap/plot_bhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,853 copying build/lib/multiqc/modules/bbmap/plot_bqhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,855 copying build/lib/multiqc/modules/bbmap/plot_basic_hist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,857 copying build/lib/multiqc/modules/bbmap/bbmap.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,860 copying build/lib/multiqc/modules/bbmap/plot_covhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,861 copying build/lib/multiqc/modules/bbmap/plot_ihist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,863 copying build/lib/multiqc/modules/bbmap/plot_qahist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,865 copying build/lib/multiqc/modules/bbmap/plot_qhist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bbmap 2024-05-31T19:26:48,867 creating build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-31T19:26:48,868 copying build/lib/multiqc/modules/busco/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-31T19:26:48,869 copying build/lib/multiqc/modules/busco/busco.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/busco 2024-05-31T19:26:48,871 creating build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-31T19:26:48,872 copying build/lib/multiqc/modules/htseq/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-31T19:26:48,874 copying build/lib/multiqc/modules/htseq/htseq.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/htseq 2024-05-31T19:26:48,877 creating build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-31T19:26:48,877 copying build/lib/multiqc/modules/ccs/ccs.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-31T19:26:48,880 copying build/lib/multiqc/modules/ccs/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/ccs 2024-05-31T19:26:48,882 creating build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-31T19:26:48,883 copying build/lib/multiqc/modules/mosdepth/mosdepth.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-31T19:26:48,886 copying build/lib/multiqc/modules/mosdepth/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/mosdepth 2024-05-31T19:26:48,888 creating build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-31T19:26:48,889 copying build/lib/multiqc/modules/porechop/porechop.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-31T19:26:48,891 copying build/lib/multiqc/modules/porechop/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/porechop 2024-05-31T19:26:48,894 creating build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-31T19:26:48,895 copying build/lib/multiqc/modules/metaphlan/metaphlan.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-31T19:26:48,897 copying build/lib/multiqc/modules/metaphlan/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/metaphlan 2024-05-31T19:26:48,899 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-31T19:26:48,900 copying build/lib/multiqc/modules/hostile/hostile.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-31T19:26:48,902 copying build/lib/multiqc/modules/hostile/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hostile 2024-05-31T19:26:48,904 creating build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-31T19:26:48,905 copying build/lib/multiqc/modules/prinseqplusplus/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-31T19:26:48,907 copying build/lib/multiqc/modules/prinseqplusplus/prinseqplusplus.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/prinseqplusplus 2024-05-31T19:26:48,909 creating build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-31T19:26:48,910 copying build/lib/multiqc/modules/trimmomatic/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-31T19:26:48,912 copying build/lib/multiqc/modules/trimmomatic/trimmomatic.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/trimmomatic 2024-05-31T19:26:48,915 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-31T19:26:48,916 copying build/lib/multiqc/modules/snpeff/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-31T19:26:48,917 copying build/lib/multiqc/modules/snpeff/snpeff.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpeff 2024-05-31T19:26:48,920 creating build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-31T19:26:48,921 copying build/lib/multiqc/modules/stacks/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-31T19:26:48,923 copying build/lib/multiqc/modules/stacks/stacks.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/stacks 2024-05-31T19:26:48,925 creating build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-31T19:26:48,926 copying build/lib/multiqc/modules/kaiju/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-31T19:26:48,928 copying build/lib/multiqc/modules/kaiju/kaiju.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/kaiju 2024-05-31T19:26:48,931 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-31T19:26:48,931 copying build/lib/multiqc/modules/pangolin/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-31T19:26:48,933 copying build/lib/multiqc/modules/pangolin/pangolin.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pangolin 2024-05-31T19:26:48,936 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-31T19:26:48,937 copying build/lib/multiqc/modules/dedup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-31T19:26:48,939 copying build/lib/multiqc/modules/dedup/dedup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dedup 2024-05-31T19:26:48,941 creating build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-31T19:26:48,942 copying build/lib/multiqc/modules/biobloomtools/biobloomtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-31T19:26:48,944 copying build/lib/multiqc/modules/biobloomtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/biobloomtools 2024-05-31T19:26:48,946 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-31T19:26:48,947 copying build/lib/multiqc/modules/fgbio/ErrorRateByReadPosition.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-31T19:26:48,949 copying build/lib/multiqc/modules/fgbio/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-31T19:26:48,951 copying build/lib/multiqc/modules/fgbio/fgbio.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-31T19:26:48,953 copying build/lib/multiqc/modules/fgbio/groupreadsbyumi.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fgbio 2024-05-31T19:26:48,955 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-31T19:26:48,956 copying build/lib/multiqc/modules/bclconvert/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-31T19:26:48,958 copying build/lib/multiqc/modules/bclconvert/bclconvert.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bclconvert 2024-05-31T19:26:48,961 copying build/lib/multiqc/modules/software_versions.py -> build/bdist.linux-armv7l/wheel/multiqc/modules 2024-05-31T19:26:48,963 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,964 copying build/lib/multiqc/modules/dragen_fastqc/read_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,966 copying build/lib/multiqc/modules/dragen_fastqc/base_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,968 copying build/lib/multiqc/modules/dragen_fastqc/dragen_fastqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,970 copying build/lib/multiqc/modules/dragen_fastqc/content_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,973 copying build/lib/multiqc/modules/dragen_fastqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,975 copying build/lib/multiqc/modules/dragen_fastqc/gc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,977 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets 2024-05-31T19:26:48,978 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets/js 2024-05-31T19:26:48,979 copying build/lib/multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc/assets/js 2024-05-31T19:26:48,982 copying build/lib/multiqc/modules/dragen_fastqc/util.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen_fastqc 2024-05-31T19:26:48,984 creating build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-31T19:26:48,985 copying build/lib/multiqc/modules/afterqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-31T19:26:48,987 copying build/lib/multiqc/modules/afterqc/afterqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/afterqc 2024-05-31T19:26:48,989 creating build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:48,990 copying build/lib/multiqc/modules/phantompeakqualtools/phantompeakqualtools.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:48,992 copying build/lib/multiqc/modules/phantompeakqualtools/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/phantompeakqualtools 2024-05-31T19:26:48,994 creating build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-31T19:26:48,995 copying build/lib/multiqc/modules/fastp/fastp.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-31T19:26:48,997 copying build/lib/multiqc/modules/fastp/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/fastp 2024-05-31T19:26:48,999 creating build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-31T19:26:49,000 copying build/lib/multiqc/modules/hicup/hicup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-31T19:26:49,003 copying build/lib/multiqc/modules/hicup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/hicup 2024-05-31T19:26:49,005 creating build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,006 copying build/lib/multiqc/modules/dragen/sc_atac_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,008 copying build/lib/multiqc/modules/dragen/vc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,010 copying build/lib/multiqc/modules/dragen/ploidy_estimation_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,012 copying build/lib/multiqc/modules/dragen/coverage_per_contig.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,014 copying build/lib/multiqc/modules/dragen/sc_rna_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,016 copying build/lib/multiqc/modules/dragen/coverage_hist.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,018 copying build/lib/multiqc/modules/dragen/overall_mean_cov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,021 copying build/lib/multiqc/modules/dragen/rna_quant_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,023 copying build/lib/multiqc/modules/dragen/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,024 copying build/lib/multiqc/modules/dragen/dragen_gc_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,027 copying build/lib/multiqc/modules/dragen/fragment_length.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,029 copying build/lib/multiqc/modules/dragen/dragen.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,030 copying build/lib/multiqc/modules/dragen/utils.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,033 copying build/lib/multiqc/modules/dragen/coverage_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,036 copying build/lib/multiqc/modules/dragen/trimmer_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,038 copying build/lib/multiqc/modules/dragen/mapping_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,041 copying build/lib/multiqc/modules/dragen/rna_transcript_cov.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,042 copying build/lib/multiqc/modules/dragen/time_metrics.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/dragen 2024-05-31T19:26:49,045 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-31T19:26:49,046 copying build/lib/multiqc/modules/bowtie2/bowtie2.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-31T19:26:49,048 copying build/lib/multiqc/modules/bowtie2/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bowtie2 2024-05-31T19:26:49,050 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-31T19:26:49,051 copying build/lib/multiqc/modules/pbmarkdup/pbmarkdup.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-31T19:26:49,053 copying build/lib/multiqc/modules/pbmarkdup/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pbmarkdup 2024-05-31T19:26:49,055 creating build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-31T19:26:49,056 copying build/lib/multiqc/modules/checkqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-31T19:26:49,058 copying build/lib/multiqc/modules/checkqc/checkqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/checkqc 2024-05-31T19:26:49,061 creating build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-31T19:26:49,062 copying build/lib/multiqc/modules/nextclade/nextclade.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-31T19:26:49,064 copying build/lib/multiqc/modules/nextclade/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/nextclade 2024-05-31T19:26:49,066 creating build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-31T19:26:49,067 copying build/lib/multiqc/modules/pycoqc/pycoqc.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-31T19:26:49,070 copying build/lib/multiqc/modules/pycoqc/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/pycoqc 2024-05-31T19:26:49,072 creating build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,073 copying build/lib/multiqc/modules/humid/stats.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,075 copying build/lib/multiqc/modules/humid/humid.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,077 copying build/lib/multiqc/modules/humid/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,079 copying build/lib/multiqc/modules/humid/neighbours.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,081 copying build/lib/multiqc/modules/humid/counts.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,082 copying build/lib/multiqc/modules/humid/clusters.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/humid 2024-05-31T19:26:49,085 creating build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-31T19:26:49,086 copying build/lib/multiqc/modules/skewer/skewer.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-31T19:26:49,088 copying build/lib/multiqc/modules/skewer/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/skewer 2024-05-31T19:26:49,091 creating build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-31T19:26:49,092 copying build/lib/multiqc/modules/bakta/bakta.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-31T19:26:49,095 copying build/lib/multiqc/modules/bakta/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/bakta 2024-05-31T19:26:49,097 creating build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-31T19:26:49,098 copying build/lib/multiqc/modules/snpsplit/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-31T19:26:49,100 copying build/lib/multiqc/modules/snpsplit/snpsplit.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/snpsplit 2024-05-31T19:26:49,105 creating build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-31T19:26:49,106 copying build/lib/multiqc/modules/xengsort/xengsort.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-31T19:26:49,110 copying build/lib/multiqc/modules/xengsort/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/xengsort 2024-05-31T19:26:49,117 creating build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-31T19:26:49,120 copying build/lib/multiqc/modules/custom_content/custom_content.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-31T19:26:49,128 copying build/lib/multiqc/modules/custom_content/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/custom_content 2024-05-31T19:26:49,130 creating build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-31T19:26:49,131 copying build/lib/multiqc/modules/jellyfish/jellyfish.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-31T19:26:49,133 copying build/lib/multiqc/modules/jellyfish/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/modules/jellyfish 2024-05-31T19:26:49,135 copying build/lib/multiqc/__main__.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:49,137 creating build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,138 copying build/lib/multiqc/core/strict_helpers.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,140 copying build/lib/multiqc/core/exec_modules.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,142 copying build/lib/multiqc/core/file_search.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,144 copying build/lib/multiqc/core/update_config.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,146 copying build/lib/multiqc/core/init_log.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,149 copying build/lib/multiqc/core/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,150 copying build/lib/multiqc/core/exceptions.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,152 copying build/lib/multiqc/core/plugin_hooks.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,153 copying build/lib/multiqc/core/software_versions.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,156 copying build/lib/multiqc/core/version_check.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,158 copying build/lib/multiqc/core/write_results.py -> build/bdist.linux-armv7l/wheel/multiqc/core 2024-05-31T19:26:49,161 copying build/lib/multiqc/report.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:49,164 copying build/lib/multiqc/search_patterns.yaml -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:49,167 copying build/lib/multiqc/interactive.py -> build/bdist.linux-armv7l/wheel/multiqc 2024-05-31T19:26:49,170 creating build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,171 copying build/lib/multiqc/utils/util_functions.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,174 copying build/lib/multiqc/utils/__init__.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,175 copying build/lib/multiqc/utils/config.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,177 copying build/lib/multiqc/utils/megaqc.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,179 copying build/lib/multiqc/utils/report.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,180 copying build/lib/multiqc/utils/mqc_colour.py -> build/bdist.linux-armv7l/wheel/multiqc/utils 2024-05-31T19:26:49,183 running install_egg_info 2024-05-31T19:26:49,188 Copying multiqc.egg-info to build/bdist.linux-armv7l/wheel/multiqc-1.22.2-py3.11.egg-info 2024-05-31T19:26:49,205 running install_scripts 2024-05-31T19:26:49,244 creating build/bdist.linux-armv7l/wheel/multiqc-1.22.2.dist-info/WHEEL 2024-05-31T19:26:49,247 creating '/tmp/pip-wheel-o1g5l5gr/.tmp-kekbzv2q/multiqc-1.22.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-31T19:26:49,251 adding 'multiqc/__init__.py' 2024-05-31T19:26:49,253 adding 'multiqc/__main__.py' 2024-05-31T19:26:49,260 adding 'multiqc/base_module.py' 2024-05-31T19:26:49,264 adding 'multiqc/config.py' 2024-05-31T19:26:49,268 adding 'multiqc/config_defaults.yaml' 2024-05-31T19:26:49,273 adding 'multiqc/interactive.py' 2024-05-31T19:26:49,277 adding 'multiqc/multiqc.py' 2024-05-31T19:26:49,285 adding 'multiqc/report.py' 2024-05-31T19:26:49,289 adding 'multiqc/search_patterns.yaml' 2024-05-31T19:26:49,291 adding 'multiqc/core/__init__.py' 2024-05-31T19:26:49,293 adding 'multiqc/core/exceptions.py' 2024-05-31T19:26:49,295 adding 'multiqc/core/exec_modules.py' 2024-05-31T19:26:49,296 adding 'multiqc/core/file_search.py' 2024-05-31T19:26:49,298 adding 'multiqc/core/init_log.py' 2024-05-31T19:26:49,299 adding 'multiqc/core/plugin_hooks.py' 2024-05-31T19:26:49,301 adding 'multiqc/core/software_versions.py' 2024-05-31T19:26:49,303 adding 'multiqc/core/strict_helpers.py' 2024-05-31T19:26:49,305 adding 'multiqc/core/update_config.py' 2024-05-31T19:26:49,306 adding 'multiqc/core/version_check.py' 2024-05-31T19:26:49,309 adding 'multiqc/core/write_results.py' 2024-05-31T19:26:49,314 adding 'multiqc/modules/__init__.py' 2024-05-31T19:26:49,316 adding 'multiqc/modules/profile_runtime.py' 2024-05-31T19:26:49,317 adding 'multiqc/modules/software_versions.py' 2024-05-31T19:26:49,319 adding 'multiqc/modules/adapterremoval/__init__.py' 2024-05-31T19:26:49,321 adding 'multiqc/modules/adapterremoval/adapterremoval.py' 2024-05-31T19:26:49,323 adding 'multiqc/modules/afterqc/__init__.py' 2024-05-31T19:26:49,324 adding 'multiqc/modules/afterqc/afterqc.py' 2024-05-31T19:26:49,326 adding 'multiqc/modules/anglerfish/__init__.py' 2024-05-31T19:26:49,328 adding 'multiqc/modules/anglerfish/anglerfish.py' 2024-05-31T19:26:49,329 adding 'multiqc/modules/bakta/__init__.py' 2024-05-31T19:26:49,331 adding 'multiqc/modules/bakta/bakta.py' 2024-05-31T19:26:49,332 adding 'multiqc/modules/bamdst/__init__.py' 2024-05-31T19:26:49,335 adding 'multiqc/modules/bamdst/bamdst.py' 2024-05-31T19:26:49,336 adding 'multiqc/modules/bamtools/__init__.py' 2024-05-31T19:26:49,338 adding 'multiqc/modules/bamtools/bamtools.py' 2024-05-31T19:26:49,339 adding 'multiqc/modules/bamtools/stats.py' 2024-05-31T19:26:49,341 adding 'multiqc/modules/bbduk/__init__.py' 2024-05-31T19:26:49,343 adding 'multiqc/modules/bbduk/bbduk.py' 2024-05-31T19:26:49,345 adding 'multiqc/modules/bbmap/__init__.py' 2024-05-31T19:26:49,347 adding 'multiqc/modules/bbmap/bbmap.py' 2024-05-31T19:26:49,349 adding 'multiqc/modules/bbmap/bbmap_filetypes.py' 2024-05-31T19:26:49,350 adding 'multiqc/modules/bbmap/plot_aqhist.py' 2024-05-31T19:26:49,351 adding 'multiqc/modules/bbmap/plot_basic_hist.py' 2024-05-31T19:26:49,353 adding 'multiqc/modules/bbmap/plot_bhist.py' 2024-05-31T19:26:49,354 adding 'multiqc/modules/bbmap/plot_bqhist.py' 2024-05-31T19:26:49,356 adding 'multiqc/modules/bbmap/plot_covhist.py' 2024-05-31T19:26:49,357 adding 'multiqc/modules/bbmap/plot_idhist.py' 2024-05-31T19:26:49,358 adding 'multiqc/modules/bbmap/plot_ihist.py' 2024-05-31T19:26:49,360 adding 'multiqc/modules/bbmap/plot_indelhist.py' 2024-05-31T19:26:49,361 adding 'multiqc/modules/bbmap/plot_mhist.py' 2024-05-31T19:26:49,362 adding 'multiqc/modules/bbmap/plot_qahist.py' 2024-05-31T19:26:49,363 adding 'multiqc/modules/bbmap/plot_qchist.py' 2024-05-31T19:26:49,365 adding 'multiqc/modules/bbmap/plot_qhist.py' 2024-05-31T19:26:49,366 adding 'multiqc/modules/bcftools/__init__.py' 2024-05-31T19:26:49,368 adding 'multiqc/modules/bcftools/bcftools.py' 2024-05-31T19:26:49,370 adding 'multiqc/modules/bcftools/stats.py' 2024-05-31T19:26:49,376 adding 'multiqc/modules/bcl2fastq/__init__.py' 2024-05-31T19:26:49,381 adding 'multiqc/modules/bcl2fastq/bcl2fastq.py' 2024-05-31T19:26:49,388 adding 'multiqc/modules/bclconvert/__init__.py' 2024-05-31T19:26:49,394 adding 'multiqc/modules/bclconvert/bclconvert.py' 2024-05-31T19:26:49,399 adding 'multiqc/modules/biobambam2/__init__.py' 2024-05-31T19:26:49,402 adding 'multiqc/modules/biobambam2/biobambam2.py' 2024-05-31T19:26:49,405 adding 'multiqc/modules/biobloomtools/__init__.py' 2024-05-31T19:26:49,407 adding 'multiqc/modules/biobloomtools/biobloomtools.py' 2024-05-31T19:26:49,408 adding 'multiqc/modules/biscuit/__init__.py' 2024-05-31T19:26:49,412 adding 'multiqc/modules/biscuit/biscuit.py' 2024-05-31T19:26:49,414 adding 'multiqc/modules/bismark/__init__.py' 2024-05-31T19:26:49,416 adding 'multiqc/modules/bismark/bismark.py' 2024-05-31T19:26:49,418 adding 'multiqc/modules/bowtie1/__init__.py' 2024-05-31T19:26:49,420 adding 'multiqc/modules/bowtie1/bowtie1.py' 2024-05-31T19:26:49,421 adding 'multiqc/modules/bowtie2/__init__.py' 2024-05-31T19:26:49,423 adding 'multiqc/modules/bowtie2/bowtie2.py' 2024-05-31T19:26:49,425 adding 'multiqc/modules/bracken/__init__.py' 2024-05-31T19:26:49,426 adding 'multiqc/modules/bracken/bracken.py' 2024-05-31T19:26:49,428 adding 'multiqc/modules/busco/__init__.py' 2024-05-31T19:26:49,429 adding 'multiqc/modules/busco/busco.py' 2024-05-31T19:26:49,431 adding 'multiqc/modules/bustools/__init__.py' 2024-05-31T19:26:49,433 adding 'multiqc/modules/bustools/bustools.py' 2024-05-31T19:26:49,435 adding 'multiqc/modules/ccs/__init__.py' 2024-05-31T19:26:49,437 adding 'multiqc/modules/ccs/ccs.py' 2024-05-31T19:26:49,438 adding 'multiqc/modules/cellranger/__init__.py' 2024-05-31T19:26:49,440 adding 'multiqc/modules/cellranger/cellranger.py' 2024-05-31T19:26:49,442 adding 'multiqc/modules/cellranger/count.py' 2024-05-31T19:26:49,444 adding 'multiqc/modules/cellranger/utils.py' 2024-05-31T19:26:49,445 adding 'multiqc/modules/cellranger/vdj.py' 2024-05-31T19:26:49,447 adding 'multiqc/modules/checkqc/__init__.py' 2024-05-31T19:26:49,450 adding 'multiqc/modules/checkqc/checkqc.py' 2024-05-31T19:26:49,451 adding 'multiqc/modules/clipandmerge/__init__.py' 2024-05-31T19:26:49,453 adding 'multiqc/modules/clipandmerge/clipandmerge.py' 2024-05-31T19:26:49,454 adding 'multiqc/modules/clusterflow/__init__.py' 2024-05-31T19:26:49,456 adding 'multiqc/modules/clusterflow/clusterflow.py' 2024-05-31T19:26:49,458 adding 'multiqc/modules/conpair/__init__.py' 2024-05-31T19:26:49,460 adding 'multiqc/modules/conpair/conpair.py' 2024-05-31T19:26:49,461 adding 'multiqc/modules/custom_content/__init__.py' 2024-05-31T19:26:49,465 adding 'multiqc/modules/custom_content/custom_content.py' 2024-05-31T19:26:49,467 adding 'multiqc/modules/cutadapt/__init__.py' 2024-05-31T19:26:49,471 adding 'multiqc/modules/cutadapt/cutadapt.py' 2024-05-31T19:26:49,473 adding 'multiqc/modules/damageprofiler/__init__.py' 2024-05-31T19:26:49,475 adding 'multiqc/modules/damageprofiler/damageprofiler.py' 2024-05-31T19:26:49,477 adding 'multiqc/modules/dedup/__init__.py' 2024-05-31T19:26:49,479 adding 'multiqc/modules/dedup/dedup.py' 2024-05-31T19:26:49,481 adding 'multiqc/modules/deeptools/__init__.py' 2024-05-31T19:26:49,483 adding 'multiqc/modules/deeptools/bamPEFragmentSizeDistribution.py' 2024-05-31T19:26:49,484 adding 'multiqc/modules/deeptools/bamPEFragmentSizeTable.py' 2024-05-31T19:26:49,486 adding 'multiqc/modules/deeptools/deeptools.py' 2024-05-31T19:26:49,487 adding 'multiqc/modules/deeptools/estimateReadFiltering.py' 2024-05-31T19:26:49,489 adding 'multiqc/modules/deeptools/plotCorrelation.py' 2024-05-31T19:26:49,490 adding 'multiqc/modules/deeptools/plotCoverage.py' 2024-05-31T19:26:49,492 adding 'multiqc/modules/deeptools/plotEnrichment.py' 2024-05-31T19:26:49,493 adding 'multiqc/modules/deeptools/plotFingerprint.py' 2024-05-31T19:26:49,494 adding 'multiqc/modules/deeptools/plotPCA.py' 2024-05-31T19:26:49,496 adding 'multiqc/modules/deeptools/plotProfile.py' 2024-05-31T19:26:49,497 adding 'multiqc/modules/diamond/__init__.py' 2024-05-31T19:26:49,498 adding 'multiqc/modules/diamond/diamond.py' 2024-05-31T19:26:49,500 adding 'multiqc/modules/disambiguate/__init__.py' 2024-05-31T19:26:49,502 adding 'multiqc/modules/disambiguate/disambiguate.py' 2024-05-31T19:26:49,503 adding 'multiqc/modules/dragen/__init__.py' 2024-05-31T19:26:49,505 adding 'multiqc/modules/dragen/coverage_hist.py' 2024-05-31T19:26:49,513 adding 'multiqc/modules/dragen/coverage_metrics.py' 2024-05-31T19:26:49,515 adding 'multiqc/modules/dragen/coverage_per_contig.py' 2024-05-31T19:26:49,517 adding 'multiqc/modules/dragen/dragen.py' 2024-05-31T19:26:49,518 adding 'multiqc/modules/dragen/dragen_gc_metrics.py' 2024-05-31T19:26:49,519 adding 'multiqc/modules/dragen/fragment_length.py' 2024-05-31T19:26:49,523 adding 'multiqc/modules/dragen/mapping_metrics.py' 2024-05-31T19:26:49,524 adding 'multiqc/modules/dragen/overall_mean_cov.py' 2024-05-31T19:26:49,526 adding 'multiqc/modules/dragen/ploidy_estimation_metrics.py' 2024-05-31T19:26:49,527 adding 'multiqc/modules/dragen/rna_quant_metrics.py' 2024-05-31T19:26:49,528 adding 'multiqc/modules/dragen/rna_transcript_cov.py' 2024-05-31T19:26:49,530 adding 'multiqc/modules/dragen/sc_atac_metrics.py' 2024-05-31T19:26:49,531 adding 'multiqc/modules/dragen/sc_rna_metrics.py' 2024-05-31T19:26:49,533 adding 'multiqc/modules/dragen/time_metrics.py' 2024-05-31T19:26:49,534 adding 'multiqc/modules/dragen/trimmer_metrics.py' 2024-05-31T19:26:49,536 adding 'multiqc/modules/dragen/utils.py' 2024-05-31T19:26:49,538 adding 'multiqc/modules/dragen/vc_metrics.py' 2024-05-31T19:26:49,540 adding 'multiqc/modules/dragen_fastqc/__init__.py' 2024-05-31T19:26:49,541 adding 'multiqc/modules/dragen_fastqc/base_metrics.py' 2024-05-31T19:26:49,543 adding 'multiqc/modules/dragen_fastqc/content_metrics.py' 2024-05-31T19:26:49,545 adding 'multiqc/modules/dragen_fastqc/dragen_fastqc.py' 2024-05-31T19:26:49,547 adding 'multiqc/modules/dragen_fastqc/gc_metrics.py' 2024-05-31T19:26:49,548 adding 'multiqc/modules/dragen_fastqc/read_metrics.py' 2024-05-31T19:26:49,550 adding 'multiqc/modules/dragen_fastqc/util.py' 2024-05-31T19:26:49,554 adding 'multiqc/modules/dragen_fastqc/assets/js/multiqc_dragen_fastqc.js' 2024-05-31T19:26:49,555 adding 'multiqc/modules/eigenstratdatabasetools/__init__.py' 2024-05-31T19:26:49,557 adding 'multiqc/modules/eigenstratdatabasetools/eigenstratdatabasetools.py' 2024-05-31T19:26:49,558 adding 'multiqc/modules/fastp/__init__.py' 2024-05-31T19:26:49,561 adding 'multiqc/modules/fastp/fastp.py' 2024-05-31T19:26:49,562 adding 'multiqc/modules/fastq_screen/__init__.py' 2024-05-31T19:26:49,564 adding 'multiqc/modules/fastq_screen/fastq_screen.py' 2024-05-31T19:26:49,566 adding 'multiqc/modules/fastqc/__init__.py' 2024-05-31T19:26:49,572 adding 'multiqc/modules/fastqc/fastqc.py' 2024-05-31T19:26:49,575 adding 'multiqc/modules/fastqc/assets/css/multiqc_fastqc.css' 2024-05-31T19:26:49,578 adding 'multiqc/modules/fastqc/assets/js/multiqc_fastqc.js' 2024-05-31T19:26:49,580 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_genome.txt' 2024-05-31T19:26:49,582 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_hg38_txome.txt' 2024-05-31T19:26:49,583 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_genome.txt' 2024-05-31T19:26:49,584 adding 'multiqc/modules/fastqc/fastqc_theoretical_gc/fastqc_theoretical_gc_mm10_txome.txt' 2024-05-31T19:26:49,586 adding 'multiqc/modules/featureCounts/__init__.py' 2024-05-31T19:26:49,587 adding 'multiqc/modules/featureCounts/feature_counts.py' 2024-05-31T19:26:49,590 adding 'multiqc/modules/fgbio/ErrorRateByReadPosition.py' 2024-05-31T19:26:49,591 adding 'multiqc/modules/fgbio/__init__.py' 2024-05-31T19:26:49,592 adding 'multiqc/modules/fgbio/fgbio.py' 2024-05-31T19:26:49,593 adding 'multiqc/modules/fgbio/groupreadsbyumi.py' 2024-05-31T19:26:49,595 adding 'multiqc/modules/filtlong/__init__.py' 2024-05-31T19:26:49,596 adding 'multiqc/modules/filtlong/filtlong.py' 2024-05-31T19:26:49,598 adding 'multiqc/modules/flash/__init__.py' 2024-05-31T19:26:49,600 adding 'multiqc/modules/flash/flash.py' 2024-05-31T19:26:49,601 adding 'multiqc/modules/flexbar/__init__.py' 2024-05-31T19:26:49,602 adding 'multiqc/modules/flexbar/flexbar.py' 2024-05-31T19:26:49,604 adding 'multiqc/modules/freyja/__init__.py' 2024-05-31T19:26:49,606 adding 'multiqc/modules/freyja/freyja.py' 2024-05-31T19:26:49,607 adding 'multiqc/modules/gatk/__init__.py' 2024-05-31T19:26:49,609 adding 'multiqc/modules/gatk/analyze_saturation_mutagenesis.py' 2024-05-31T19:26:49,611 adding 'multiqc/modules/gatk/base_recalibrator.py' 2024-05-31T19:26:49,612 adding 'multiqc/modules/gatk/gatk.py' 2024-05-31T19:26:49,614 adding 'multiqc/modules/gatk/varianteval.py' 2024-05-31T19:26:49,616 adding 'multiqc/modules/gffcompare/__init__.py' 2024-05-31T19:26:49,618 adding 'multiqc/modules/gffcompare/gffcompare.py' 2024-05-31T19:26:49,619 adding 'multiqc/modules/goleft_indexcov/__init__.py' 2024-05-31T19:26:49,621 adding 'multiqc/modules/goleft_indexcov/goleft_indexcov.py' 2024-05-31T19:26:49,623 adding 'multiqc/modules/gopeaks/__init__.py' 2024-05-31T19:26:49,624 adding 'multiqc/modules/gopeaks/gopeaks.py' 2024-05-31T19:26:49,626 adding 'multiqc/modules/happy/__init__.py' 2024-05-31T19:26:49,627 adding 'multiqc/modules/happy/happy.py' 2024-05-31T19:26:49,629 adding 'multiqc/modules/hicexplorer/__init__.py' 2024-05-31T19:26:49,631 adding 'multiqc/modules/hicexplorer/hicexplorer.py' 2024-05-31T19:26:49,633 adding 'multiqc/modules/hicpro/__init__.py' 2024-05-31T19:26:49,635 adding 'multiqc/modules/hicpro/hicpro.py' 2024-05-31T19:26:49,637 adding 'multiqc/modules/hicup/__init__.py' 2024-05-31T19:26:49,639 adding 'multiqc/modules/hicup/hicup.py' 2024-05-31T19:26:49,640 adding 'multiqc/modules/hifiasm/__init__.py' 2024-05-31T19:26:49,642 adding 'multiqc/modules/hifiasm/hifiasm.py' 2024-05-31T19:26:49,643 adding 'multiqc/modules/hisat2/__init__.py' 2024-05-31T19:26:49,645 adding 'multiqc/modules/hisat2/hisat2.py' 2024-05-31T19:26:49,647 adding 'multiqc/modules/homer/__init__.py' 2024-05-31T19:26:49,648 adding 'multiqc/modules/homer/findpeaks.py' 2024-05-31T19:26:49,650 adding 'multiqc/modules/homer/homer.py' 2024-05-31T19:26:49,652 adding 'multiqc/modules/homer/tagdirectory.py' 2024-05-31T19:26:49,654 adding 'multiqc/modules/hops/__init__.py' 2024-05-31T19:26:49,655 adding 'multiqc/modules/hops/hops.py' 2024-05-31T19:26:49,657 adding 'multiqc/modules/hostile/__init__.py' 2024-05-31T19:26:49,658 adding 'multiqc/modules/hostile/hostile.py' 2024-05-31T19:26:49,660 adding 'multiqc/modules/htseq/__init__.py' 2024-05-31T19:26:49,662 adding 'multiqc/modules/htseq/htseq.py' 2024-05-31T19:26:49,663 adding 'multiqc/modules/humid/__init__.py' 2024-05-31T19:26:49,665 adding 'multiqc/modules/humid/clusters.py' 2024-05-31T19:26:49,666 adding 'multiqc/modules/humid/counts.py' 2024-05-31T19:26:49,667 adding 'multiqc/modules/humid/humid.py' 2024-05-31T19:26:49,668 adding 'multiqc/modules/humid/neighbours.py' 2024-05-31T19:26:49,670 adding 'multiqc/modules/humid/stats.py' 2024-05-31T19:26:49,671 adding 'multiqc/modules/interop/__init__.py' 2024-05-31T19:26:49,674 adding 'multiqc/modules/interop/interop.py' 2024-05-31T19:26:49,675 adding 'multiqc/modules/isoseq/__init__.py' 2024-05-31T19:26:49,677 adding 'multiqc/modules/isoseq/isoseq.py' 2024-05-31T19:26:49,678 adding 'multiqc/modules/ivar/__init__.py' 2024-05-31T19:26:49,680 adding 'multiqc/modules/ivar/ivar.py' 2024-05-31T19:26:49,681 adding 'multiqc/modules/jcvi/__init__.py' 2024-05-31T19:26:49,683 adding 'multiqc/modules/jcvi/jcvi.py' 2024-05-31T19:26:49,685 adding 'multiqc/modules/jellyfish/__init__.py' 2024-05-31T19:26:49,686 adding 'multiqc/modules/jellyfish/jellyfish.py' 2024-05-31T19:26:49,687 adding 'multiqc/modules/kaiju/__init__.py' 2024-05-31T19:26:49,689 adding 'multiqc/modules/kaiju/kaiju.py' 2024-05-31T19:26:49,691 adding 'multiqc/modules/kallisto/__init__.py' 2024-05-31T19:26:49,692 adding 'multiqc/modules/kallisto/kallisto.py' 2024-05-31T19:26:49,694 adding 'multiqc/modules/kat/__init__.py' 2024-05-31T19:26:49,695 adding 'multiqc/modules/kat/kat.py' 2024-05-31T19:26:49,697 adding 'multiqc/modules/kraken/__init__.py' 2024-05-31T19:26:49,699 adding 'multiqc/modules/kraken/kraken.py' 2024-05-31T19:26:49,701 adding 'multiqc/modules/leehom/__init__.py' 2024-05-31T19:26:49,702 adding 'multiqc/modules/leehom/leehom.py' 2024-05-31T19:26:49,704 adding 'multiqc/modules/librarian/__init__.py' 2024-05-31T19:26:49,705 adding 'multiqc/modules/librarian/librarian.py' 2024-05-31T19:26:49,707 adding 'multiqc/modules/lima/__init__.py' 2024-05-31T19:26:49,709 adding 'multiqc/modules/lima/lima.py' 2024-05-31T19:26:49,710 adding 'multiqc/modules/longranger/__init__.py' 2024-05-31T19:26:49,712 adding 'multiqc/modules/longranger/longranger.py' 2024-05-31T19:26:49,714 adding 'multiqc/modules/macs2/__init__.py' 2024-05-31T19:26:49,716 adding 'multiqc/modules/macs2/macs2.py' 2024-05-31T19:26:49,717 adding 'multiqc/modules/malt/__init__.py' 2024-05-31T19:26:49,719 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'multiqc/plots/plotly/plot.py' 2024-05-31T19:26:50,090 adding 'multiqc/plots/plotly/scatter.py' 2024-05-31T19:26:50,093 adding 'multiqc/plots/plotly/table.py' 2024-05-31T19:26:50,096 adding 'multiqc/plots/plotly/violin.py' 2024-05-31T19:26:50,098 adding 'multiqc/templates/__init__.py' 2024-05-31T19:26:50,099 adding 'multiqc/templates/default/__init__.py' 2024-05-31T19:26:50,100 adding 'multiqc/templates/default/base.html' 2024-05-31T19:26:50,102 adding 'multiqc/templates/default/content.html' 2024-05-31T19:26:50,103 adding 'multiqc/templates/default/foot.html' 2024-05-31T19:26:50,104 adding 'multiqc/templates/default/footer.html' 2024-05-31T19:26:50,106 adding 'multiqc/templates/default/general_stats.html' 2024-05-31T19:26:50,107 adding 'multiqc/templates/default/head.html' 2024-05-31T19:26:50,108 adding 'multiqc/templates/default/header.html' 2024-05-31T19:26:50,109 adding 'multiqc/templates/default/includes.html' 2024-05-31T19:26:50,111 adding 'multiqc/templates/default/nav.html' 2024-05-31T19:26:50,113 adding 'multiqc/templates/default/toolbox.html' 2024-05-31T19:26:50,123 adding 'multiqc/templates/default/assets/css/bootstrap.min.css' 2024-05-31T19:26:50,127 adding 'multiqc/templates/default/assets/css/default_multiqc.css' 2024-05-31T19:26:50,129 adding 'multiqc/templates/default/assets/css/jquery.toast.css' 2024-05-31T19:26:50,132 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.eot' 2024-05-31T19:26:50,152 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.svg' 2024-05-31T19:26:50,159 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.ttf' 2024-05-31T19:26:50,163 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff' 2024-05-31T19:26:50,166 adding 'multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.woff2' 2024-05-31T19:26:50,168 adding 'multiqc/templates/default/assets/img/MultiQC_logo.png' 2024-05-31T19:26:50,170 adding 'multiqc/templates/default/assets/img/MultiQC_logo_dark.svg' 2024-05-31T19:26:50,171 adding 'multiqc/templates/default/assets/img/favicon-16x16.png' 2024-05-31T19:26:50,173 adding 'multiqc/templates/default/assets/img/favicon-32x32.png' 2024-05-31T19:26:50,174 adding 'multiqc/templates/default/assets/img/favicon-96x96.png' 2024-05-31T19:26:50,176 adding 'multiqc/templates/default/assets/img/seqera_logo.png' 2024-05-31T19:26:50,177 adding 'multiqc/templates/default/assets/img/seqera_logo_mono.png' 2024-05-31T19:26:50,179 adding 'multiqc/templates/default/assets/js/decompress.js' 2024-05-31T19:26:50,181 adding 'multiqc/templates/default/assets/js/flat.js' 2024-05-31T19:26:50,182 adding 'multiqc/templates/default/assets/js/multiqc.js' 2024-05-31T19:26:50,184 adding 'multiqc/templates/default/assets/js/plotting.js' 2024-05-31T19:26:50,186 adding 'multiqc/templates/default/assets/js/render.js' 2024-05-31T19:26:50,188 adding 'multiqc/templates/default/assets/js/tables.js' 2024-05-31T19:26:50,193 adding 'multiqc/templates/default/assets/js/toolbox.js' 2024-05-31T19:26:50,195 adding 'multiqc/templates/default/assets/js/packages/FileSaver.min.js' 2024-05-31T19:26:50,199 adding 'multiqc/templates/default/assets/js/packages/bootstrap.min.js' 2024-05-31T19:26:50,212 adding 'multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js' 2024-05-31T19:26:50,217 adding 'multiqc/templates/default/assets/js/packages/jquery-ui.min.js' 2024-05-31T19:26:50,222 adding 'multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js' 2024-05-31T19:26:50,224 adding 'multiqc/templates/default/assets/js/packages/jquery.toast.min.js' 2024-05-31T19:26:50,236 adding 'multiqc/templates/default/assets/js/packages/jszip.min.js' 2024-05-31T19:26:50,239 adding 'multiqc/templates/default/assets/js/packages/pako_inflate.min.js' 2024-05-31T19:26:51,324 adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.js' 2024-05-31T19:26:51,814 adding 'multiqc/templates/default/assets/js/packages/plotly-2.27.0.min.js' 2024-05-31T19:26:51,838 adding 'multiqc/templates/default/assets/js/plots/bar.js' 2024-05-31T19:26:51,839 adding 'multiqc/templates/default/assets/js/plots/box.js' 2024-05-31T19:26:51,841 adding 'multiqc/templates/default/assets/js/plots/heatmap.js' 2024-05-31T19:26:51,842 adding 'multiqc/templates/default/assets/js/plots/line.js' 2024-05-31T19:26:51,843 adding 'multiqc/templates/default/assets/js/plots/scatter.js' 2024-05-31T19:26:51,845 adding 'multiqc/templates/default/assets/js/plots/violin.js' 2024-05-31T19:26:51,847 adding 'multiqc/templates/gathered/__init__.py' 2024-05-31T19:26:51,848 adding 'multiqc/templates/gathered/content.html' 2024-05-31T19:26:51,850 adding 'multiqc/templates/gathered/nav.html' 2024-05-31T19:26:51,851 adding 'multiqc/templates/geo/__init__.py' 2024-05-31T19:26:51,853 adding 'multiqc/templates/geo/includes.html' 2024-05-31T19:26:51,863 adding 'multiqc/templates/geo/assets/css/bootstrap.min.css' 2024-05-31T19:26:51,866 adding 'multiqc/templates/geo/assets/img/emailme.gif' 2024-05-31T19:26:51,871 adding 'multiqc/templates/geo/assets/img/flames.gif' 2024-05-31T19:26:51,873 adding 'multiqc/templates/geo/assets/img/glyphicons-halflings-white.png' 2024-05-31T19:26:51,875 adding 'multiqc/templates/geo/assets/img/glyphicons-halflings.png' 2024-05-31T19:26:51,878 adding 'multiqc/templates/geo/assets/img/hot.gif' 2024-05-31T19:26:51,888 adding 'multiqc/templates/geo/assets/img/mchammer.gif' 2024-05-31T19:26:51,891 adding 'multiqc/templates/geo/assets/img/microfab.gif' 2024-05-31T19:26:51,892 adding 'multiqc/templates/geo/assets/img/new.gif' 2024-05-31T19:26:51,894 adding 'multiqc/templates/geo/assets/img/new2.gif' 2024-05-31T19:26:51,896 adding 'multiqc/templates/geo/assets/img/progress.gif' 2024-05-31T19:26:51,897 adding 'multiqc/templates/geo/assets/img/rainbow.gif' 2024-05-31T19:26:51,899 adding 'multiqc/templates/geo/assets/img/stars.gif' 2024-05-31T19:26:51,901 adding 'multiqc/templates/sections/__init__.py' 2024-05-31T19:26:51,902 adding 'multiqc/templates/sections/content.html' 2024-05-31T19:26:51,904 adding 'multiqc/templates/simple/__init__.py' 2024-05-31T19:26:51,905 adding 'multiqc/templates/simple/foot.html' 2024-05-31T19:26:51,907 adding 'multiqc/templates/simple/header.html' 2024-05-31T19:26:51,908 adding 'multiqc/templates/simple/includes.html' 2024-05-31T19:26:51,909 adding 'multiqc/templates/simple/nav.html' 2024-05-31T19:26:51,910 adding 'multiqc/templates/simple/toolbox.html' 2024-05-31T19:26:51,912 adding 'multiqc/utils/__init__.py' 2024-05-31T19:26:51,913 adding 'multiqc/utils/config.py' 2024-05-31T19:26:51,915 adding 'multiqc/utils/megaqc.py' 2024-05-31T19:26:51,917 adding 'multiqc/utils/mqc_colour.py' 2024-05-31T19:26:51,919 adding 'multiqc/utils/report.py' 2024-05-31T19:26:51,920 adding 'multiqc/utils/util_functions.py' 2024-05-31T19:26:51,927 adding 'multiqc-1.22.2.dist-info/LICENSE' 2024-05-31T19:26:51,934 adding 'multiqc-1.22.2.dist-info/METADATA' 2024-05-31T19:26:51,935 adding 'multiqc-1.22.2.dist-info/WHEEL' 2024-05-31T19:26:51,936 adding 'multiqc-1.22.2.dist-info/entry_points.txt' 2024-05-31T19:26:51,937 adding 'multiqc-1.22.2.dist-info/top_level.txt' 2024-05-31T19:26:51,946 adding 'multiqc-1.22.2.dist-info/RECORD' 2024-05-31T19:26:52,015 removing build/bdist.linux-armv7l/wheel 2024-05-31T19:26:52,319 Building wheel for multiqc (pyproject.toml): finished with status 'done' 2024-05-31T19:26:52,407 Created wheel for multiqc: filename=multiqc-1.22.2-py3-none-any.whl size=4477831 sha256=0766bae07eba16a1e5d325f47779b039cdc1f3c8767f4fe382e2c6e05a00f75f 2024-05-31T19:26:52,408 Stored in directory: /tmp/pip-ephem-wheel-cache-9_r0au56/wheels/be/44/bd/8730f1deb7f16d4649dcab81f2b407b1d2d54d1f4c11b74909 2024-05-31T19:26:52,457 Successfully built multiqc 2024-05-31T19:26:52,569 Removed build tracker: '/tmp/pip-build-tracker-re0ero4r'