2024-06-04T12:03:14,457 Created temporary directory: /tmp/pip-build-tracker-ie5wy27n 2024-06-04T12:03:14,458 Initialized build tracking at /tmp/pip-build-tracker-ie5wy27n 2024-06-04T12:03:14,459 Created build tracker: /tmp/pip-build-tracker-ie5wy27n 2024-06-04T12:03:14,459 Entered build tracker: /tmp/pip-build-tracker-ie5wy27n 2024-06-04T12:03:14,460 Created temporary directory: /tmp/pip-wheel-a7siwrk1 2024-06-04T12:03:14,464 Created temporary directory: /tmp/pip-ephem-wheel-cache-p1lc3qmc 2024-06-04T12:03:14,487 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-04T12:03:14,490 2 location(s) to search for versions of immunebuilder: 2024-06-04T12:03:14,490 * https://pypi.org/simple/immunebuilder/ 2024-06-04T12:03:14,490 * https://www.piwheels.org/simple/immunebuilder/ 2024-06-04T12:03:14,491 Fetching project page and analyzing links: https://pypi.org/simple/immunebuilder/ 2024-06-04T12:03:14,492 Getting page https://pypi.org/simple/immunebuilder/ 2024-06-04T12:03:14,493 Found index url https://pypi.org/simple/ 2024-06-04T12:03:14,719 Fetched page https://pypi.org/simple/immunebuilder/ as application/vnd.pypi.simple.v1+json 2024-06-04T12:03:14,724 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/5b/62/c90966963cfe975012a477b77393d89ff2e1e0ea1ed99085b154de7ab254/ImmuneBuilder-0.0.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,724 Found link https://files.pythonhosted.org/packages/af/d4/7b69ec9429555e3ed51eccd9f8ad80be9ee756a89d377d623d66c74f55a2/ImmuneBuilder-0.0.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.1 2024-06-04T12:03:14,725 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/90/36/fa736209f45841978ca31c2cb6567eebc2107e2e348fe3090bbe28eb7ab2/ImmuneBuilder-0.0.3-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,726 Found link https://files.pythonhosted.org/packages/fb/25/9724d7fd557836d7b79f531f35462778b7b37e10bbfc0f990afcee89a041/ImmuneBuilder-0.0.3.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.3 2024-06-04T12:03:14,726 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/f8/22/dce7ffded153ca4d8678f0113c30067b9242e64ee0da7519561ee68643ac/ImmuneBuilder-0.0.4-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,727 Found link https://files.pythonhosted.org/packages/68/53/26b06e59cce6d6ffc16f1a1022c930d64c414339a916de677ade0cc2ea10/ImmuneBuilder-0.0.4.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.4 2024-06-04T12:03:14,727 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/35/66/6e6343d51bcf15256172bcc7fb963629e76fd192c60065444674b9dde2f3/ImmuneBuilder-0.0.5-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,728 Found link https://files.pythonhosted.org/packages/29/f5/d54e3520570e95b3c0147dc384449496bd6391d00e539b60be4e37b289fc/ImmuneBuilder-0.0.5.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.5 2024-06-04T12:03:14,729 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/d6/49/4bd7b45fa9c8eda204f2e42439cb65dfef955dbb5f31f38dd2321bb7cb82/ImmuneBuilder-0.0.6-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,729 Found link https://files.pythonhosted.org/packages/91/d1/f1f5cefc4b2a3eecbca98b256fb2772e82fa08e4d1ea46aae03f129820c1/ImmuneBuilder-0.0.6.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.6 2024-06-04T12:03:14,730 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/48/6f/37a4ce9515bc3e09728ee1e7b60b16de96b8a18aaf1a363b45f6d8871a9c/ImmuneBuilder-0.0.7-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,730 Found link https://files.pythonhosted.org/packages/83/a1/ff8708e36e8422f8a3badb7c4106d307a5bdaefe75a3b13999305f837158/ImmuneBuilder-0.0.7.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.7 2024-06-04T12:03:14,731 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/d7/fc/d8cf7e599cbff74caabde2fe36a1baf6d87568fe259870604e9f4cb4503b/ImmuneBuilder-0.0.8-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,732 Found link https://files.pythonhosted.org/packages/d2/53/b0a301d8f4680ef71bdc6eedfdf10bc8b18852b6f7e50a9afd2f2c9d6801/ImmuneBuilder-0.0.8.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.8 2024-06-04T12:03:14,732 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/a7/1a/fbb2cda814f30c92d36e9d522cf6aeecf929fc20b8990874c4afcd9c0581/ImmuneBuilder-0.0.9-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,733 Found link https://files.pythonhosted.org/packages/48/b7/a30233d46457101c6e4cc35a7564f937c8cfd291d4785f76863faa8ed99d/ImmuneBuilder-0.0.9.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.9 2024-06-04T12:03:14,733 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/c4/5a/cf6f2b45429d404ad5ce6c3d98afd2d460982e4093d78b6bf7f1d621181f/ImmuneBuilder-1.0.0-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,734 Found link https://files.pythonhosted.org/packages/46/eb/9dd56f05303ae1d929d9811a9dff396e9b30cb8ca16d38f7be39666a1ee7/ImmuneBuilder-1.0.0.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.0.0 2024-06-04T12:03:14,734 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/af/e2/703397ee6569f9490a6b023fb561c76791ce96d8d01819b3638e4bbb4322/ImmuneBuilder-1.0.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,735 Found link https://files.pythonhosted.org/packages/20/e9/73aaf5e2f11e673073318acffa37d12e6ed6100a52455b1dd6fb26be5aa1/ImmuneBuilder-1.0.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.0.1 2024-06-04T12:03:14,736 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/9e/16/6e54cee4269758c3143f2eae8eb5f1bc79684c6e90aa843f5c60343285e0/ImmuneBuilder-1.1.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-04T12:03:14,737 Found link https://files.pythonhosted.org/packages/0b/65/7ee2188e8cb5a1316f14973c74cd278b3d257687eb89a9442f1cad316b7f/immunebuilder-1.1.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.1.1 2024-06-04T12:03:14,737 Fetching project page and analyzing links: https://www.piwheels.org/simple/immunebuilder/ 2024-06-04T12:03:14,738 Getting page https://www.piwheels.org/simple/immunebuilder/ 2024-06-04T12:03:14,739 Found index url https://www.piwheels.org/simple/ 2024-06-04T12:03:15,078 Fetched page https://www.piwheels.org/simple/immunebuilder/ as text/html 2024-06-04T12:03:15,083 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-1.0.1-py3-none-any.whl#sha256=7e0784d817c4b42b8fe85d53c345fc0f25d5968ae28bc64c46c34e47be219080 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,084 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-1.0.0-py3-none-any.whl#sha256=e61314ced732f8103415cc6ea74f3f788ffb761863610f887632520a977b3484 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,085 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.9-py3-none-any.whl#sha256=b5322092cb58dcbe2ab1a9b8781d69d00ab6d52d09bce30f28e71e79c4fa4684 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,085 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.8-py3-none-any.whl#sha256=a50dc8a61dfe4dc9ef59dc880ba98f24e41920b28efa899ed2dc0b2db2648912 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,086 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.7-py3-none-any.whl#sha256=3ec4108e72eddbc98e73efabf9a3c1d1a147044a3749af0176544cdf673ec56e (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,087 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.6-py3-none-any.whl#sha256=906483ee7c974a1f2e4a384cd2020c16ea43495bdc0e6c4d9b3028f50d22e418 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,088 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.5-py3-none-any.whl#sha256=178492c9aaecd59db5994177900d7e26e07a7afce013a2b098cfed20db59d9f6 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,088 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.4-py3-none-any.whl#sha256=4129c8b3ef77d0552a4b113b22271bebe5072901623a2255b0a05fd78fb62b46 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,089 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.3-py3-none-any.whl#sha256=68bf4d794ec797fe4bb54138fd3819abce9954f8eeba79f9c5ca9f287398cb4c (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,089 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.1-py3-none-any.whl#sha256=ef3805955cc6eac12f903ff1e1d3378c5d80adb8d4df560a93d6fba2278c04e6 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-04T12:03:15,090 Skipping link: not a file: https://www.piwheels.org/simple/immunebuilder/ 2024-06-04T12:03:15,090 Skipping link: not a file: https://pypi.org/simple/immunebuilder/ 2024-06-04T12:03:15,123 Given no hashes to check 1 links for project 'immunebuilder': discarding no candidates 2024-06-04T12:03:15,155 Collecting immunebuilder==1.1.1 2024-06-04T12:03:15,158 Created temporary directory: /tmp/pip-unpack-li029y_g 2024-06-04T12:03:15,387 Downloading immunebuilder-1.1.1.tar.gz (23 kB) 2024-06-04T12:03:15,459 Added immunebuilder==1.1.1 from https://files.pythonhosted.org/packages/0b/65/7ee2188e8cb5a1316f14973c74cd278b3d257687eb89a9442f1cad316b7f/immunebuilder-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-ie5wy27n' 2024-06-04T12:03:15,461 Running setup.py (path:/tmp/pip-wheel-a7siwrk1/immunebuilder_823f6880eb66457788acf8dc73cf8035/setup.py) egg_info for package immunebuilder 2024-06-04T12:03:15,461 Created temporary directory: /tmp/pip-pip-egg-info-h21y4ffn 2024-06-04T12:03:15,462 Preparing metadata (setup.py): started 2024-06-04T12:03:15,464 Running command python setup.py egg_info 2024-06-04T12:03:16,345 running egg_info 2024-06-04T12:03:16,347 creating /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info 2024-06-04T12:03:16,374 writing /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/PKG-INFO 2024-06-04T12:03:16,377 writing dependency_links to /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/dependency_links.txt 2024-06-04T12:03:16,379 writing entry points to /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/entry_points.txt 2024-06-04T12:03:16,381 writing requirements to /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/requires.txt 2024-06-04T12:03:16,382 writing top-level names to /tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/top_level.txt 2024-06-04T12:03:16,383 writing manifest file '/tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-04T12:03:16,467 reading manifest file '/tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-04T12:03:16,469 reading manifest template 'MANIFEST.in' 2024-06-04T12:03:16,471 adding license file 'LICENSE' 2024-06-04T12:03:16,474 writing manifest file '/tmp/pip-pip-egg-info-h21y4ffn/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-04T12:03:16,581 Preparing metadata (setup.py): finished with status 'done' 2024-06-04T12:03:16,585 Source in /tmp/pip-wheel-a7siwrk1/immunebuilder_823f6880eb66457788acf8dc73cf8035 has version 1.1.1, which satisfies requirement immunebuilder==1.1.1 from https://files.pythonhosted.org/packages/0b/65/7ee2188e8cb5a1316f14973c74cd278b3d257687eb89a9442f1cad316b7f/immunebuilder-1.1.1.tar.gz 2024-06-04T12:03:16,586 Removed immunebuilder==1.1.1 from https://files.pythonhosted.org/packages/0b/65/7ee2188e8cb5a1316f14973c74cd278b3d257687eb89a9442f1cad316b7f/immunebuilder-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-ie5wy27n' 2024-06-04T12:03:16,591 Created temporary directory: /tmp/pip-unpack-s_rqskxn 2024-06-04T12:03:16,592 Created temporary directory: /tmp/pip-unpack-b7y3ynm4 2024-06-04T12:03:16,601 Building wheels for collected packages: immunebuilder 2024-06-04T12:03:16,605 Created temporary directory: /tmp/pip-wheel-s5yelozk 2024-06-04T12:03:16,606 Building wheel for immunebuilder (setup.py): started 2024-06-04T12:03:16,607 Destination directory: /tmp/pip-wheel-s5yelozk 2024-06-04T12:03:16,607 Running command python setup.py bdist_wheel 2024-06-04T12:03:17,482 running bdist_wheel 2024-06-04T12:03:17,617 running build 2024-06-04T12:03:17,617 running build_py 2024-06-04T12:03:17,646 creating build 2024-06-04T12:03:17,647 creating build/lib 2024-06-04T12:03:17,648 creating build/lib/ImmuneBuilder 2024-06-04T12:03:17,649 copying ImmuneBuilder/models.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,651 copying ImmuneBuilder/sequence_checks.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,653 copying ImmuneBuilder/refine.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,655 copying ImmuneBuilder/__init__.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,657 copying ImmuneBuilder/constants.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,660 copying ImmuneBuilder/NanoBodyBuilder2.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,663 copying ImmuneBuilder/TCRBuilder2.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,665 copying ImmuneBuilder/util.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,667 copying ImmuneBuilder/rigids.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,670 copying ImmuneBuilder/ABodyBuilder2.py -> build/lib/ImmuneBuilder 2024-06-04T12:03:17,672 running egg_info 2024-06-04T12:03:17,701 writing ImmuneBuilder.egg-info/PKG-INFO 2024-06-04T12:03:17,705 writing dependency_links to ImmuneBuilder.egg-info/dependency_links.txt 2024-06-04T12:03:17,706 writing entry points to ImmuneBuilder.egg-info/entry_points.txt 2024-06-04T12:03:17,708 writing requirements to ImmuneBuilder.egg-info/requires.txt 2024-06-04T12:03:17,709 writing top-level names to ImmuneBuilder.egg-info/top_level.txt 2024-06-04T12:03:17,738 reading manifest file 'ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-04T12:03:17,741 reading manifest template 'MANIFEST.in' 2024-06-04T12:03:17,743 adding license file 'LICENSE' 2024-06-04T12:03:17,745 writing manifest file 'ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-04T12:03:17,748 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ImmuneBuilder.trained_model' is absent from the `packages` configuration. 2024-06-04T12:03:17,748 !! 2024-06-04T12:03:17,749 ******************************************************************************** 2024-06-04T12:03:17,750 ############################ 2024-06-04T12:03:17,750 # Package would be ignored # 2024-06-04T12:03:17,751 ############################ 2024-06-04T12:03:17,751 Python recognizes 'ImmuneBuilder.trained_model' as an importable package[^1], 2024-06-04T12:03:17,752 but it is absent from setuptools' `packages` configuration. 2024-06-04T12:03:17,753 This leads to an ambiguous overall configuration. If you want to distribute this 2024-06-04T12:03:17,754 package, please make sure that 'ImmuneBuilder.trained_model' is explicitly added 2024-06-04T12:03:17,754 to the `packages` configuration field. 2024-06-04T12:03:17,755 Alternatively, you can also rely on setuptools' discovery methods 2024-06-04T12:03:17,756 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-06-04T12:03:17,756 instead of `find_packages(...)`/`find:`). 2024-06-04T12:03:17,757 You can read more about "package discovery" on setuptools documentation page: 2024-06-04T12:03:17,758 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-06-04T12:03:17,758 If you don't want 'ImmuneBuilder.trained_model' to be distributed and are 2024-06-04T12:03:17,759 already explicitly excluding 'ImmuneBuilder.trained_model' via 2024-06-04T12:03:17,759 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-06-04T12:03:17,760 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-06-04T12:03:17,760 combination with a more fine grained `package-data` configuration. 2024-06-04T12:03:17,761 You can read more about "package data files" on setuptools documentation page: 2024-06-04T12:03:17,762 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-06-04T12:03:17,763 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-06-04T12:03:17,764 even if it does not contain any `.py` files. 2024-06-04T12:03:17,764 On the other hand, currently there is no concept of package data 2024-06-04T12:03:17,765 directory, all directories are treated like packages. 2024-06-04T12:03:17,765 ******************************************************************************** 2024-06-04T12:03:17,766 !! 2024-06-04T12:03:17,767 check.warn(importable) 2024-06-04T12:03:17,767 creating build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,768 copying ImmuneBuilder/trained_model/.gitkeep -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,768 copying ImmuneBuilder/trained_model/antibody_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,768 copying ImmuneBuilder/trained_model/antibody_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,769 copying ImmuneBuilder/trained_model/antibody_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,769 copying ImmuneBuilder/trained_model/antibody_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,770 copying ImmuneBuilder/trained_model/nanobody_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,770 copying ImmuneBuilder/trained_model/nanobody_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,771 copying ImmuneBuilder/trained_model/nanobody_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,771 copying ImmuneBuilder/trained_model/nanobody_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,772 copying ImmuneBuilder/trained_model/tcr2_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,774 copying ImmuneBuilder/trained_model/tcr2_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,776 copying ImmuneBuilder/trained_model/tcr2_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,777 copying ImmuneBuilder/trained_model/tcr2_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,779 copying ImmuneBuilder/trained_model/tcr_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,781 copying ImmuneBuilder/trained_model/tcr_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,783 copying ImmuneBuilder/trained_model/tcr_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,784 copying ImmuneBuilder/trained_model/tcr_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-04T12:03:17,814 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-06-04T12:03:17,814 !! 2024-06-04T12:03:17,815 ******************************************************************************** 2024-06-04T12:03:17,816 Please avoid running ``setup.py`` directly. 2024-06-04T12:03:17,816 Instead, use pypa/build, pypa/installer or other 2024-06-04T12:03:17,817 standards-based tools. 2024-06-04T12:03:17,818 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-06-04T12:03:17,818 ******************************************************************************** 2024-06-04T12:03:17,819 !! 2024-06-04T12:03:17,819 self.initialize_options() 2024-06-04T12:03:17,842 installing to build/bdist.linux-armv7l/wheel 2024-06-04T12:03:17,843 running install 2024-06-04T12:03:17,867 running install_lib 2024-06-04T12:03:17,894 creating build/bdist.linux-armv7l 2024-06-04T12:03:17,894 creating build/bdist.linux-armv7l/wheel 2024-06-04T12:03:17,896 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,897 copying build/lib/ImmuneBuilder/models.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,900 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,901 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,903 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,904 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,905 copying build/lib/ImmuneBuilder/trained_model/antibody_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,907 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,908 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,910 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,911 copying build/lib/ImmuneBuilder/trained_model/antibody_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,913 copying build/lib/ImmuneBuilder/trained_model/tcr_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,914 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,916 copying build/lib/ImmuneBuilder/trained_model/tcr_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,918 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,919 copying build/lib/ImmuneBuilder/trained_model/antibody_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,921 copying build/lib/ImmuneBuilder/trained_model/tcr_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,922 copying build/lib/ImmuneBuilder/trained_model/tcr_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,923 copying build/lib/ImmuneBuilder/trained_model/antibody_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,925 copying build/lib/ImmuneBuilder/trained_model/.gitkeep -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-04T12:03:17,927 copying build/lib/ImmuneBuilder/sequence_checks.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,929 copying build/lib/ImmuneBuilder/refine.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,931 copying build/lib/ImmuneBuilder/__init__.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,933 copying build/lib/ImmuneBuilder/constants.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,936 copying build/lib/ImmuneBuilder/NanoBodyBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,938 copying build/lib/ImmuneBuilder/TCRBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,941 copying build/lib/ImmuneBuilder/util.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,943 copying build/lib/ImmuneBuilder/rigids.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,945 copying build/lib/ImmuneBuilder/ABodyBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-04T12:03:17,947 running install_egg_info 2024-06-04T12:03:17,982 Copying ImmuneBuilder.egg-info to build/bdist.linux-armv7l/wheel/ImmuneBuilder-1.1.1-py3.11.egg-info 2024-06-04T12:03:17,994 running install_scripts 2024-06-04T12:03:18,010 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder-1.1.1.dist-info/WHEEL 2024-06-04T12:03:18,013 creating '/tmp/pip-wheel-s5yelozk/ImmuneBuilder-1.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-04T12:03:18,016 adding 'ImmuneBuilder/ABodyBuilder2.py' 2024-06-04T12:03:18,018 adding 'ImmuneBuilder/NanoBodyBuilder2.py' 2024-06-04T12:03:18,020 adding 'ImmuneBuilder/TCRBuilder2.py' 2024-06-04T12:03:18,021 adding 'ImmuneBuilder/__init__.py' 2024-06-04T12:03:18,023 adding 'ImmuneBuilder/constants.py' 2024-06-04T12:03:18,025 adding 'ImmuneBuilder/models.py' 2024-06-04T12:03:18,027 adding 'ImmuneBuilder/refine.py' 2024-06-04T12:03:18,029 adding 'ImmuneBuilder/rigids.py' 2024-06-04T12:03:18,031 adding 'ImmuneBuilder/sequence_checks.py' 2024-06-04T12:03:18,032 adding 'ImmuneBuilder/util.py' 2024-06-04T12:03:18,034 adding 'ImmuneBuilder/trained_model/.gitkeep' 2024-06-04T12:03:18,035 adding 'ImmuneBuilder/trained_model/antibody_model_1' 2024-06-04T12:03:18,036 adding 'ImmuneBuilder/trained_model/antibody_model_2' 2024-06-04T12:03:18,037 adding 'ImmuneBuilder/trained_model/antibody_model_3' 2024-06-04T12:03:18,038 adding 'ImmuneBuilder/trained_model/antibody_model_4' 2024-06-04T12:03:18,039 adding 'ImmuneBuilder/trained_model/nanobody_model_1' 2024-06-04T12:03:18,040 adding 'ImmuneBuilder/trained_model/nanobody_model_2' 2024-06-04T12:03:18,041 adding 'ImmuneBuilder/trained_model/nanobody_model_3' 2024-06-04T12:03:18,042 adding 'ImmuneBuilder/trained_model/nanobody_model_4' 2024-06-04T12:03:18,044 adding 'ImmuneBuilder/trained_model/tcr2_model_1' 2024-06-04T12:03:18,045 adding 'ImmuneBuilder/trained_model/tcr2_model_2' 2024-06-04T12:03:18,046 adding 'ImmuneBuilder/trained_model/tcr2_model_3' 2024-06-04T12:03:18,047 adding 'ImmuneBuilder/trained_model/tcr2_model_4' 2024-06-04T12:03:18,048 adding 'ImmuneBuilder/trained_model/tcr_model_1' 2024-06-04T12:03:18,049 adding 'ImmuneBuilder/trained_model/tcr_model_2' 2024-06-04T12:03:18,050 adding 'ImmuneBuilder/trained_model/tcr_model_3' 2024-06-04T12:03:18,051 adding 'ImmuneBuilder/trained_model/tcr_model_4' 2024-06-04T12:03:18,054 adding 'ImmuneBuilder-1.1.1.dist-info/LICENSE' 2024-06-04T12:03:18,056 adding 'ImmuneBuilder-1.1.1.dist-info/METADATA' 2024-06-04T12:03:18,057 adding 'ImmuneBuilder-1.1.1.dist-info/WHEEL' 2024-06-04T12:03:18,058 adding 'ImmuneBuilder-1.1.1.dist-info/entry_points.txt' 2024-06-04T12:03:18,059 adding 'ImmuneBuilder-1.1.1.dist-info/top_level.txt' 2024-06-04T12:03:18,060 adding 'ImmuneBuilder-1.1.1.dist-info/RECORD' 2024-06-04T12:03:18,062 removing build/bdist.linux-armv7l/wheel 2024-06-04T12:03:18,180 Building wheel for immunebuilder (setup.py): finished with status 'done' 2024-06-04T12:03:18,183 Created wheel for immunebuilder: filename=ImmuneBuilder-1.1.1-py3-none-any.whl size=32639 sha256=bad8942b3704120323b8166d791f90015e7d2c1bf434df6497ff9e117703c2a3 2024-06-04T12:03:18,184 Stored in directory: /tmp/pip-ephem-wheel-cache-p1lc3qmc/wheels/96/d1/62/91f4310caa3bc2118b7d796307b5780cda7d63a30ce5c0497e 2024-06-04T12:03:18,197 Successfully built immunebuilder 2024-06-04T12:03:18,201 Removed build tracker: '/tmp/pip-build-tracker-ie5wy27n'