2024-06-09T13:35:59,064 Created temporary directory: /tmp/pip-build-tracker-1187dk60
2024-06-09T13:35:59,065 Initialized build tracking at /tmp/pip-build-tracker-1187dk60
2024-06-09T13:35:59,066 Created build tracker: /tmp/pip-build-tracker-1187dk60
2024-06-09T13:35:59,066 Entered build tracker: /tmp/pip-build-tracker-1187dk60
2024-06-09T13:35:59,067 Created temporary directory: /tmp/pip-wheel-pgruw41m
2024-06-09T13:35:59,070 Created temporary directory: /tmp/pip-ephem-wheel-cache-hopd59py
2024-06-09T13:35:59,092 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-09T13:35:59,095 2 location(s) to search for versions of inspirems:
2024-06-09T13:35:59,095 * https://pypi.org/simple/inspirems/
2024-06-09T13:35:59,095 * https://www.piwheels.org/simple/inspirems/
2024-06-09T13:35:59,096 Fetching project page and analyzing links: https://pypi.org/simple/inspirems/
2024-06-09T13:35:59,097 Getting page https://pypi.org/simple/inspirems/
2024-06-09T13:35:59,098 Found index url https://pypi.org/simple/
2024-06-09T13:35:59,315 Fetched page https://pypi.org/simple/inspirems/ as application/vnd.pypi.simple.v1+json
2024-06-09T13:35:59,320   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/21/ed/6d393035e39df20a47456d76b0676af2f2e680df2e14ee316d6b7e91a91c/inspirems-1.0-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,321   Found link https://files.pythonhosted.org/packages/97/b0/27d9b88cc43ac59da36ccc3917fea0e67b15fce32f311a564821e54abf11/inspirems-1.0.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.0
2024-06-09T13:35:59,322   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/02/39/9dc410c73a90b2b49831bdbd0a554db0073698c6e787d8bd634f6531e6bc/inspirems-1.1-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,322   Found link https://files.pythonhosted.org/packages/e2/75/6bff101ea099553981964e3d38fa92c28311a05551d4d926d724c094ad13/inspirems-1.1.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.1
2024-06-09T13:35:59,323   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/84/98/1b895ef7993bd7dd2854f6172423f8a660f86cd514f620b1c9cd188c396f/inspirems-1.2-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,324   Found link https://files.pythonhosted.org/packages/7e/10/2b596194d586edb11c4304547f5004a14315701e48851776547ddb38ee36/inspirems-1.2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.2
2024-06-09T13:35:59,325   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/84/a8/652f6d0c69f3eaeb9c463fe03ccfea8975a2d151601a294127e6691080b7/inspirems-1.3-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,326   Found link https://files.pythonhosted.org/packages/2b/b0/2c786759fd8a978c976a5bb8ffb9c42c40fcd1f7ae0dd832394712bd9c23/inspirems-1.3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.3
2024-06-09T13:35:59,327   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/fc/d7/92a4140347196e70f8600b3386d1d7b71fb3573f601b6d56bfb74fa5214a/inspirems-1.4-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,328   Found link https://files.pythonhosted.org/packages/e1/c2/b10b18d40c2c2546303aa8d122748c6b209b6e980a8e4f7ccd237a6f062c/inspirems-1.4.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.4
2024-06-09T13:35:59,328   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/32/9b/3716e6f093acba536938344fda48b635c7ca12df699dc762625463cd3417/inspirems-1.5-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,329   Found link https://files.pythonhosted.org/packages/63/71/7ba53a8886bc6db90be18e1caad685e4a566551eec5c1e0510309e399dda/inspirems-1.5.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.5
2024-06-09T13:35:59,330   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/b7/c9/8b430128e708a0a97c730b3ceb10541675286bcc59ecf44535451ff90d96/inspirems-2.0rc1-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,331   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/89/10/35b4acef4fa55ee787bbeaf84b62302d8fce5ffe70e40e9533de525a9d2c/inspirems-2.0rc2-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,332   Link requires a different Python (3.11.2 not in: '==3.11'): https://files.pythonhosted.org/packages/00/21/634aeb25deb52b0d77a33866501cdf9720f5afb68120c7ba11c9a1685d4b/inspirems-2.0rc2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,332   Skipping link: 2.0rc2 Requires-Python ==3.11: https://files.pythonhosted.org/packages/00/21/634aeb25deb52b0d77a33866501cdf9720f5afb68120c7ba11c9a1685d4b/inspirems-2.0rc2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,333   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/3a/31/6d2bb08845252409bb48b03ac6bc9810068804d20d28ee6be9df0eb53f07/inspirems-2.0rc3-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,334   Link requires a different Python (3.11.2 not in: '==3.11'): https://files.pythonhosted.org/packages/2e/5a/da1d4af6dad817df01d1bea247675a2ab472309271c1406121662acadb45/inspirems-2.0rc3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,334   Skipping link: 2.0rc3 Requires-Python ==3.11: https://files.pythonhosted.org/packages/2e/5a/da1d4af6dad817df01d1bea247675a2ab472309271c1406121662acadb45/inspirems-2.0rc3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11)
2024-06-09T13:35:59,335   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/d6/e1/2fa7dbf0f30c8c502f62e015ba33d58e6fdb509e68a3e7f73bf4875711ba/inspirems-2.0rc4-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11)
2024-06-09T13:35:59,336   Found link https://files.pythonhosted.org/packages/f6/df/8f42597b188ef51107b3b24df4e950804c13a2c4a388107e40e05bbb4317/inspirems-2.0rc4.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc4
2024-06-09T13:35:59,337   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/5f/77/a3098717d8e9132bcc6d55041165da1a429d3b35a180fb6dee3306237dd9/inspirems-2.0rc5-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11)
2024-06-09T13:35:59,338   Found link https://files.pythonhosted.org/packages/cc/88/f1a1919d3f8d5f97b5c0a1ed877da038fa32bc827887f6bb76a4df429d37/inspirems-2.0rc5.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc5
2024-06-09T13:35:59,338   Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/e1/9f/6ebb3d62383cdbcf2209d067ff44565ce693e9aeabc0cf942cf01089d8e3/inspirems-2.0rc6-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11)
2024-06-09T13:35:59,339   Found link https://files.pythonhosted.org/packages/76/6e/63365b6b1d721ac032ad662549b02204e5558338a75979db0db714b6a2fd/inspirems-2.0rc6.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc6
2024-06-09T13:35:59,340 Fetching project page and analyzing links: https://www.piwheels.org/simple/inspirems/
2024-06-09T13:35:59,341 Getting page https://www.piwheels.org/simple/inspirems/
2024-06-09T13:35:59,342 Found index url https://www.piwheels.org/simple/
2024-06-09T13:35:59,570 Fetched page https://www.piwheels.org/simple/inspirems/ as text/html
2024-06-09T13:35:59,573   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-2.0rc5-py3-none-any.whl#sha256=8999bacdc062e085a518b47d8efe4dc28c32fb569971abd3b02774e96a11ac00 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.11)
2024-06-09T13:35:59,574   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-2.0rc4-py3-none-any.whl#sha256=6e37b2d7faf909b0d795ec91b97f2999b9e52aad2789a6b833fd1f255b1e3897 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.11)
2024-06-09T13:35:59,574   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.5-py3-none-any.whl#sha256=9856deec8e87cbc02e654bb8c1d86d5059df13a78e258a99c874b240d0416101 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,575   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.4-py3-none-any.whl#sha256=4f2a8f0cd2185cd7c8c0e8ab2e0856998880fe818631409510ae3d5e162dd9ef (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,575   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.3-py3-none-any.whl#sha256=cb8c2b1aa253c7afd2225db0cd66568ffe9c19f87e384cdf0e65232302afbbdb (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,576   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.2-py3-none-any.whl#sha256=c8423e9c5476fd5547e2f06739c9f2e1ad3e2b8779cb09d75368bcd794574b39 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,577   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.1-py3-none-any.whl#sha256=98ebaf5ab791e8b8a7f2941f6ffd59e1ebb2c166ef5354c6fdbe6048bc84b6cc (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,577   Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.0-py3-none-any.whl#sha256=93552d309190f792c0a3e08f858aac22aaedbf1db699420fd06205f879684289 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8)
2024-06-09T13:35:59,578 Skipping link: not a file: https://www.piwheels.org/simple/inspirems/
2024-06-09T13:35:59,578 Skipping link: not a file: https://pypi.org/simple/inspirems/
2024-06-09T13:35:59,597 Given no hashes to check 1 links for project 'inspirems': discarding no candidates
2024-06-09T13:35:59,615 Collecting inspirems==2.0rc6
2024-06-09T13:35:59,617   Created temporary directory: /tmp/pip-unpack-4xcgo3i8
2024-06-09T13:35:59,848   Downloading inspirems-2.0rc6.tar.gz (123 kB)
2024-06-09T13:36:00,046   Added inspirems==2.0rc6 from https://files.pythonhosted.org/packages/76/6e/63365b6b1d721ac032ad662549b02204e5558338a75979db0db714b6a2fd/inspirems-2.0rc6.tar.gz to build tracker '/tmp/pip-build-tracker-1187dk60'
2024-06-09T13:36:00,048   Running setup.py (path:/tmp/pip-wheel-pgruw41m/inspirems_e8af65a27df34d54822c1f9f8c6ae3db/setup.py) egg_info for package inspirems
2024-06-09T13:36:00,049   Created temporary directory: /tmp/pip-pip-egg-info-qsqgr5j2
2024-06-09T13:36:00,050   Preparing metadata (setup.py): started
2024-06-09T13:36:00,051   Running command python setup.py egg_info
2024-06-09T13:36:01,146   running egg_info
2024-06-09T13:36:01,147   creating /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info
2024-06-09T13:36:01,172   writing /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/PKG-INFO
2024-06-09T13:36:01,177   writing dependency_links to /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/dependency_links.txt
2024-06-09T13:36:01,179   writing entry points to /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/entry_points.txt
2024-06-09T13:36:01,182   writing requirements to /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/requires.txt
2024-06-09T13:36:01,183   writing top-level names to /tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/top_level.txt
2024-06-09T13:36:01,184   writing manifest file '/tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/SOURCES.txt'
2024-06-09T13:36:01,240   file inspire.py (for module inspire) not found
2024-06-09T13:36:01,241   file inspire/input.py (for module inspire.input) not found
2024-06-09T13:36:01,241   file inspire/quant.py (for module inspire.quant) not found
2024-06-09T13:36:01,241   file inspire/epitope.py (for module inspire.epitope) not found
2024-06-09T13:36:01,242   file inspire/plot_spectra.py (for module inspire.plot_spectra) not found
2024-06-09T13:36:01,275   reading manifest file '/tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/SOURCES.txt'
2024-06-09T13:36:01,276   adding license file 'LICENSE'
2024-06-09T13:36:01,279   writing manifest file '/tmp/pip-pip-egg-info-qsqgr5j2/inspirems.egg-info/SOURCES.txt'
2024-06-09T13:36:01,396   Preparing metadata (setup.py): finished with status 'done'
2024-06-09T13:36:01,402   Source in /tmp/pip-wheel-pgruw41m/inspirems_e8af65a27df34d54822c1f9f8c6ae3db has version 2.0rc6, which satisfies requirement inspirems==2.0rc6 from https://files.pythonhosted.org/packages/76/6e/63365b6b1d721ac032ad662549b02204e5558338a75979db0db714b6a2fd/inspirems-2.0rc6.tar.gz
2024-06-09T13:36:01,403   Removed inspirems==2.0rc6 from https://files.pythonhosted.org/packages/76/6e/63365b6b1d721ac032ad662549b02204e5558338a75979db0db714b6a2fd/inspirems-2.0rc6.tar.gz from build tracker '/tmp/pip-build-tracker-1187dk60'
2024-06-09T13:36:01,411 Created temporary directory: /tmp/pip-unpack-u2i7pt5c
2024-06-09T13:36:01,412 Created temporary directory: /tmp/pip-unpack-29otko7q
2024-06-09T13:36:01,492 Building wheels for collected packages: inspirems
2024-06-09T13:36:01,496   Created temporary directory: /tmp/pip-wheel-523tpey3
2024-06-09T13:36:01,497   Building wheel for inspirems (setup.py): started
2024-06-09T13:36:01,498   Destination directory: /tmp/pip-wheel-523tpey3
2024-06-09T13:36:01,499   Running command python setup.py bdist_wheel
2024-06-09T13:36:02,576   running bdist_wheel
2024-06-09T13:36:02,675   running build
2024-06-09T13:36:02,676   running build_py
2024-06-09T13:36:02,702   file inspire.py (for module inspire) not found
2024-06-09T13:36:02,703   file inspire/input.py (for module inspire.input) not found
2024-06-09T13:36:02,703   file inspire/quant.py (for module inspire.quant) not found
2024-06-09T13:36:02,704   file inspire/epitope.py (for module inspire.epitope) not found
2024-06-09T13:36:02,705   file inspire/plot_spectra.py (for module inspire.plot_spectra) not found
2024-06-09T13:36:02,705   creating build
2024-06-09T13:36:02,705   creating build/lib
2024-06-09T13:36:02,706   creating build/lib/inspire
2024-06-09T13:36:02,707   copying inspire/__init__.py -> build/lib/inspire
2024-06-09T13:36:02,709   copying inspire/retention_time.py -> build/lib/inspire
2024-06-09T13:36:02,712   copying inspire/prepare.py -> build/lib/inspire
2024-06-09T13:36:02,714   copying inspire/constants.py -> build/lib/inspire
2024-06-09T13:36:02,716   copying inspire/figures.py -> build/lib/inspire
2024-06-09T13:36:02,718   copying inspire/spectral_features.py -> build/lib/inspire
2024-06-09T13:36:02,720   copying inspire/prosit.py -> build/lib/inspire
2024-06-09T13:36:02,723   copying inspire/report.py -> build/lib/inspire
2024-06-09T13:36:02,725   copying inspire/download.py -> build/lib/inspire
2024-06-09T13:36:02,727   copying inspire/utils.py -> build/lib/inspire
2024-06-09T13:36:02,730   copying inspire/mz_match.py -> build/lib/inspire
2024-06-09T13:36:02,732   copying inspire/config.py -> build/lib/inspire
2024-06-09T13:36:02,734   copying inspire/convert.py -> build/lib/inspire
2024-06-09T13:36:02,736   copying inspire/accession.py -> build/lib/inspire
2024-06-09T13:36:02,738   copying inspire/predict_binding.py -> build/lib/inspire
2024-06-09T13:36:02,740   copying inspire/calibration.py -> build/lib/inspire
2024-06-09T13:36:02,742   copying inspire/predict_spectra.py -> build/lib/inspire
2024-06-09T13:36:02,744   copying inspire/validate.py -> build/lib/inspire
2024-06-09T13:36:02,746   copying inspire/prosit_delta.py -> build/lib/inspire
2024-06-09T13:36:02,749   copying inspire/basic_features.py -> build/lib/inspire
2024-06-09T13:36:02,750   copying inspire/get_spectral_angle.py -> build/lib/inspire
2024-06-09T13:36:02,752   copying inspire/rescore.py -> build/lib/inspire
2024-06-09T13:36:02,754   copying inspire/run.py -> build/lib/inspire
2024-06-09T13:36:02,756   copying inspire/html_template.py -> build/lib/inspire
2024-06-09T13:36:02,759   copying inspire/feature_selection.py -> build/lib/inspire
2024-06-09T13:36:02,761   copying inspire/execute_msfragger.py -> build/lib/inspire
2024-06-09T13:36:02,763   copying inspire/feature_creation.py -> build/lib/inspire
2024-06-09T13:36:02,766   creating build/lib/inspire/input
2024-06-09T13:36:02,767   copying inspire/input/mgf.py -> build/lib/inspire/input
2024-06-09T13:36:02,769   copying inspire/input/ssl.py -> build/lib/inspire/input
2024-06-09T13:36:02,770   copying inspire/input/mhcpan.py -> build/lib/inspire/input
2024-06-09T13:36:02,772   copying inspire/input/msp.py -> build/lib/inspire/input
2024-06-09T13:36:02,775   copying inspire/input/mascot.py -> build/lib/inspire/input
2024-06-09T13:36:02,777   copying inspire/input/maxquant.py -> build/lib/inspire/input
2024-06-09T13:36:02,779   copying inspire/input/msfragger.py -> build/lib/inspire/input
2024-06-09T13:36:02,782   copying inspire/input/mzml.py -> build/lib/inspire/input
2024-06-09T13:36:02,783   copying inspire/input/peaks.py -> build/lib/inspire/input
2024-06-09T13:36:02,786   copying inspire/input/search_results.py -> build/lib/inspire/input
2024-06-09T13:36:02,788   copying inspire/input/__init__.py -> build/lib/inspire/input
2024-06-09T13:36:02,790   creating build/lib/inspire/quant
2024-06-09T13:36:02,790   copying inspire/quant/execute.py -> build/lib/inspire/quant
2024-06-09T13:36:02,793   copying inspire/quant/report_template.py -> build/lib/inspire/quant
2024-06-09T13:36:02,795   copying inspire/quant/utils.py -> build/lib/inspire/quant
2024-06-09T13:36:02,797   copying inspire/quant/normalise.py -> build/lib/inspire/quant
2024-06-09T13:36:02,799   copying inspire/quant/de_analysis.py -> build/lib/inspire/quant
2024-06-09T13:36:02,802   copying inspire/quant/__init__.py -> build/lib/inspire/quant
2024-06-09T13:36:02,804   creating build/lib/inspire/epitope
2024-06-09T13:36:02,805   copying inspire/epitope/report_template.py -> build/lib/inspire/epitope
2024-06-09T13:36:02,807   copying inspire/epitope/plot_utils.py -> build/lib/inspire/epitope
2024-06-09T13:36:02,809   copying inspire/epitope/extract_candidates.py -> build/lib/inspire/epitope
2024-06-09T13:36:02,811   copying inspire/epitope/proteome_mapping.py -> build/lib/inspire/epitope
2024-06-09T13:36:02,813   copying inspire/epitope/__init__.py -> build/lib/inspire/epitope
2024-06-09T13:36:02,815   creating build/lib/inspire/plot_spectra
2024-06-09T13:36:02,816   copying inspire/plot_spectra/plot_spectra.py -> build/lib/inspire/plot_spectra
2024-06-09T13:36:02,819   copying inspire/plot_spectra/plot_isobars.py -> build/lib/inspire/plot_spectra
2024-06-09T13:36:02,821   copying inspire/plot_spectra/plot_spec_utils.py -> build/lib/inspire/plot_spectra
2024-06-09T13:36:02,824   copying inspire/plot_spectra/__init__.py -> build/lib/inspire/plot_spectra
2024-06-09T13:36:02,827   file inspire.py (for module inspire) not found
2024-06-09T13:36:02,828   file inspire/input.py (for module inspire.input) not found
2024-06-09T13:36:02,828   file inspire/quant.py (for module inspire.quant) not found
2024-06-09T13:36:02,829   file inspire/epitope.py (for module inspire.epitope) not found
2024-06-09T13:36:02,829   file inspire/plot_spectra.py (for module inspire.plot_spectra) not found
2024-06-09T13:36:02,856   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-06-09T13:36:02,857   !!

2024-06-09T13:36:02,858           ********************************************************************************
2024-06-09T13:36:02,859           Please avoid running ``setup.py`` directly.
2024-06-09T13:36:02,860           Instead, use pypa/build, pypa/installer or other
2024-06-09T13:36:02,860           standards-based tools.

2024-06-09T13:36:02,861           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-06-09T13:36:02,862           ********************************************************************************

2024-06-09T13:36:02,862   !!
2024-06-09T13:36:02,863     self.initialize_options()
2024-06-09T13:36:02,882   installing to build/bdist.linux-armv7l/wheel
2024-06-09T13:36:02,882   running install
2024-06-09T13:36:02,907   running install_lib
2024-06-09T13:36:02,931   creating build/bdist.linux-armv7l
2024-06-09T13:36:02,932   creating build/bdist.linux-armv7l/wheel
2024-06-09T13:36:02,934   creating build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,934   copying build/lib/inspire/retention_time.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,937   copying build/lib/inspire/prepare.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,939   copying build/lib/inspire/constants.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,941   copying build/lib/inspire/figures.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,943   copying build/lib/inspire/spectral_features.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,946   copying build/lib/inspire/prosit.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,949   creating build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,950   copying build/lib/inspire/input/mgf.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,952   copying build/lib/inspire/input/ssl.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,953   copying build/lib/inspire/input/mhcpan.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,955   copying build/lib/inspire/input/msp.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,957   copying build/lib/inspire/input/mascot.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,960   copying build/lib/inspire/input/maxquant.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,962   copying build/lib/inspire/input/msfragger.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,965   copying build/lib/inspire/input/mzml.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,966   copying build/lib/inspire/input/peaks.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,969   copying build/lib/inspire/input/search_results.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,970   copying build/lib/inspire/input/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/input
2024-06-09T13:36:02,972   creating build/bdist.linux-armv7l/wheel/inspire/plot_spectra
2024-06-09T13:36:02,973   copying build/lib/inspire/plot_spectra/plot_spectra.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra
2024-06-09T13:36:02,975   copying build/lib/inspire/plot_spectra/plot_isobars.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra
2024-06-09T13:36:02,977   copying build/lib/inspire/plot_spectra/plot_spec_utils.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra
2024-06-09T13:36:02,980   copying build/lib/inspire/plot_spectra/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra
2024-06-09T13:36:02,981   copying build/lib/inspire/report.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,984   creating build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,985   copying build/lib/inspire/quant/execute.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,988   copying build/lib/inspire/quant/report_template.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,990   copying build/lib/inspire/quant/utils.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,992   copying build/lib/inspire/quant/normalise.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,994   copying build/lib/inspire/quant/de_analysis.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,996   copying build/lib/inspire/quant/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/quant
2024-06-09T13:36:02,997   copying build/lib/inspire/download.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:02,999   copying build/lib/inspire/utils.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,002   copying build/lib/inspire/mz_match.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,003   copying build/lib/inspire/config.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,006   copying build/lib/inspire/convert.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,008   creating build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,009   copying build/lib/inspire/epitope/report_template.py -> build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,011   copying build/lib/inspire/epitope/plot_utils.py -> build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,013   copying build/lib/inspire/epitope/extract_candidates.py -> build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,015   copying build/lib/inspire/epitope/proteome_mapping.py -> build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,017   copying build/lib/inspire/epitope/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/epitope
2024-06-09T13:36:03,019   copying build/lib/inspire/accession.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,021   copying build/lib/inspire/predict_binding.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,023   copying build/lib/inspire/calibration.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,025   copying build/lib/inspire/predict_spectra.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,027   copying build/lib/inspire/validate.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,029   copying build/lib/inspire/prosit_delta.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,031   copying build/lib/inspire/basic_features.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,033   copying build/lib/inspire/get_spectral_angle.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,035   copying build/lib/inspire/rescore.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,037   copying build/lib/inspire/run.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,040   copying build/lib/inspire/html_template.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,042   copying build/lib/inspire/feature_selection.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,044   copying build/lib/inspire/execute_msfragger.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,047   copying build/lib/inspire/__init__.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,048   copying build/lib/inspire/feature_creation.py -> build/bdist.linux-armv7l/wheel/inspire
2024-06-09T13:36:03,051   running install_egg_info
2024-06-09T13:36:03,115   running egg_info
2024-06-09T13:36:03,141   writing inspirems.egg-info/PKG-INFO
2024-06-09T13:36:03,145   writing dependency_links to inspirems.egg-info/dependency_links.txt
2024-06-09T13:36:03,147   writing entry points to inspirems.egg-info/entry_points.txt
2024-06-09T13:36:03,150   writing requirements to inspirems.egg-info/requires.txt
2024-06-09T13:36:03,151   writing top-level names to inspirems.egg-info/top_level.txt
2024-06-09T13:36:03,153   file inspire.py (for module inspire) not found
2024-06-09T13:36:03,154   file inspire/input.py (for module inspire.input) not found
2024-06-09T13:36:03,154   file inspire/quant.py (for module inspire.quant) not found
2024-06-09T13:36:03,155   file inspire/epitope.py (for module inspire.epitope) not found
2024-06-09T13:36:03,156   file inspire/plot_spectra.py (for module inspire.plot_spectra) not found
2024-06-09T13:36:03,183   reading manifest file 'inspirems.egg-info/SOURCES.txt'
2024-06-09T13:36:03,186   adding license file 'LICENSE'
2024-06-09T13:36:03,190   writing manifest file 'inspirems.egg-info/SOURCES.txt'
2024-06-09T13:36:03,191   Copying inspirems.egg-info to build/bdist.linux-armv7l/wheel/inspirems-2.0rc6-py3.11.egg-info
2024-06-09T13:36:03,202   running install_scripts
2024-06-09T13:36:03,238   creating build/bdist.linux-armv7l/wheel/inspirems-2.0rc6.dist-info/WHEEL
2024-06-09T13:36:03,241   creating '/tmp/pip-wheel-523tpey3/inspirems-2.0rc6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-09T13:36:03,243   adding 'inspire/__init__.py'
2024-06-09T13:36:03,245   adding 'inspire/accession.py'
2024-06-09T13:36:03,247   adding 'inspire/basic_features.py'
2024-06-09T13:36:03,248   adding 'inspire/calibration.py'
2024-06-09T13:36:03,250   adding 'inspire/config.py'
2024-06-09T13:36:03,252   adding 'inspire/constants.py'
2024-06-09T13:36:03,254   adding 'inspire/convert.py'
2024-06-09T13:36:03,255   adding 'inspire/download.py'
2024-06-09T13:36:03,257   adding 'inspire/execute_msfragger.py'
2024-06-09T13:36:03,259   adding 'inspire/feature_creation.py'
2024-06-09T13:36:03,262   adding 'inspire/feature_selection.py'
2024-06-09T13:36:03,263   adding 'inspire/figures.py'
2024-06-09T13:36:03,265   adding 'inspire/get_spectral_angle.py'
2024-06-09T13:36:03,266   adding 'inspire/html_template.py'
2024-06-09T13:36:03,268   adding 'inspire/mz_match.py'
2024-06-09T13:36:03,269   adding 'inspire/predict_binding.py'
2024-06-09T13:36:03,270   adding 'inspire/predict_spectra.py'
2024-06-09T13:36:03,272   adding 'inspire/prepare.py'
2024-06-09T13:36:03,274   adding 'inspire/prosit.py'
2024-06-09T13:36:03,276   adding 'inspire/prosit_delta.py'
2024-06-09T13:36:03,279   adding 'inspire/report.py'
2024-06-09T13:36:03,281   adding 'inspire/rescore.py'
2024-06-09T13:36:03,282   adding 'inspire/retention_time.py'
2024-06-09T13:36:03,284   adding 'inspire/run.py'
2024-06-09T13:36:03,287   adding 'inspire/spectral_features.py'
2024-06-09T13:36:03,289   adding 'inspire/utils.py'
2024-06-09T13:36:03,291   adding 'inspire/validate.py'
2024-06-09T13:36:03,293   adding 'inspire/epitope/__init__.py'
2024-06-09T13:36:03,295   adding 'inspire/epitope/extract_candidates.py'
2024-06-09T13:36:03,297   adding 'inspire/epitope/plot_utils.py'
2024-06-09T13:36:03,298   adding 'inspire/epitope/proteome_mapping.py'
2024-06-09T13:36:03,300   adding 'inspire/epitope/report_template.py'
2024-06-09T13:36:03,302   adding 'inspire/input/__init__.py'
2024-06-09T13:36:03,304   adding 'inspire/input/mascot.py'
2024-06-09T13:36:03,306   adding 'inspire/input/maxquant.py'
2024-06-09T13:36:03,307   adding 'inspire/input/mgf.py'
2024-06-09T13:36:03,309   adding 'inspire/input/mhcpan.py'
2024-06-09T13:36:03,311   adding 'inspire/input/msfragger.py'
2024-06-09T13:36:03,312   adding 'inspire/input/msp.py'
2024-06-09T13:36:03,314   adding 'inspire/input/mzml.py'
2024-06-09T13:36:03,315   adding 'inspire/input/peaks.py'
2024-06-09T13:36:03,317   adding 'inspire/input/search_results.py'
2024-06-09T13:36:03,318   adding 'inspire/input/ssl.py'
2024-06-09T13:36:03,320   adding 'inspire/plot_spectra/__init__.py'
2024-06-09T13:36:03,322   adding 'inspire/plot_spectra/plot_isobars.py'
2024-06-09T13:36:03,325   adding 'inspire/plot_spectra/plot_spec_utils.py'
2024-06-09T13:36:03,327   adding 'inspire/plot_spectra/plot_spectra.py'
2024-06-09T13:36:03,328   adding 'inspire/quant/__init__.py'
2024-06-09T13:36:03,330   adding 'inspire/quant/de_analysis.py'
2024-06-09T13:36:03,332   adding 'inspire/quant/execute.py'
2024-06-09T13:36:03,334   adding 'inspire/quant/normalise.py'
2024-06-09T13:36:03,335   adding 'inspire/quant/report_template.py'
2024-06-09T13:36:03,337   adding 'inspire/quant/utils.py'
2024-06-09T13:36:03,341   adding 'inspirems-2.0rc6.dist-info/LICENSE'
2024-06-09T13:36:03,344   adding 'inspirems-2.0rc6.dist-info/METADATA'
2024-06-09T13:36:03,345   adding 'inspirems-2.0rc6.dist-info/WHEEL'
2024-06-09T13:36:03,346   adding 'inspirems-2.0rc6.dist-info/entry_points.txt'
2024-06-09T13:36:03,347   adding 'inspirems-2.0rc6.dist-info/top_level.txt'
2024-06-09T13:36:03,348   adding 'inspirems-2.0rc6.dist-info/RECORD'
2024-06-09T13:36:03,352   removing build/bdist.linux-armv7l/wheel
2024-06-09T13:36:03,486   Building wheel for inspirems (setup.py): finished with status 'done'
2024-06-09T13:36:03,490   Created wheel for inspirems: filename=inspirems-2.0rc6-py3-none-any.whl size=143229 sha256=d7714b7f1e7b71ea72d5770399eb39a343cb37c889ce0502685c55019191b9c7
2024-06-09T13:36:03,491   Stored in directory: /tmp/pip-ephem-wheel-cache-hopd59py/wheels/17/38/15/1d02b92de119bd7dbee5132be77f472d305c8498ccd6c6d7fb
2024-06-09T13:36:03,506 Successfully built inspirems
2024-06-09T13:36:03,513 Removed build tracker: '/tmp/pip-build-tracker-1187dk60'