2024-06-10T12:06:18,073 Created temporary directory: /tmp/pip-build-tracker-v55hgiek
2024-06-10T12:06:18,074 Initialized build tracking at /tmp/pip-build-tracker-v55hgiek
2024-06-10T12:06:18,074 Created build tracker: /tmp/pip-build-tracker-v55hgiek
2024-06-10T12:06:18,074 Entered build tracker: /tmp/pip-build-tracker-v55hgiek
2024-06-10T12:06:18,075 Created temporary directory: /tmp/pip-wheel-tfl1jgut
2024-06-10T12:06:18,079 Created temporary directory: /tmp/pip-ephem-wheel-cache-dudgaopu
2024-06-10T12:06:18,103 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-10T12:06:18,106 2 location(s) to search for versions of scipion-em-novactf:
2024-06-10T12:06:18,106 * https://pypi.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,106 * https://www.piwheels.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,107 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,108 Getting page https://pypi.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,109 Found index url https://pypi.org/simple/
2024-06-10T12:06:18,161 Fetched page https://pypi.org/simple/scipion-em-novactf/ as application/vnd.pypi.simple.v1+json
2024-06-10T12:06:18,165   Found link https://files.pythonhosted.org/packages/bb/e6/b8eb73284cd61bff1c400f18ef944186dcf45a89661a0ed479aa6d7f4d68/scipion-em-novactf-1.0.0.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 1.0.0
2024-06-10T12:06:18,165   Found link https://files.pythonhosted.org/packages/37/e0/a9f58fdc98f3f2ce9c664003e4518c27cc654e80cd116ffb469fd62961a0/scipion-em-novactf-3.0.0.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.0
2024-06-10T12:06:18,166   Found link https://files.pythonhosted.org/packages/c2/0d/675b20f869737e9eca449c1e28ca948299cae488c81f66477c38e70dc5aa/scipion-em-novactf-3.0.1.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.1
2024-06-10T12:06:18,166   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/16/b7/37638d144cc0034aa77a1bb4c206f04bb6d6a364fb9ea18178a13c6f26cc/scipion_em_novactf-3.0.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,166   Found link https://files.pythonhosted.org/packages/ef/8b/30e2e09f3c05a7860a41eedac43cc22449e75b106cd2fd6f9aa6963557ed/scipion-em-novactf-3.0.2.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.2
2024-06-10T12:06:18,166   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/7b/45/9ae412d9f90272b495973a99d8c90ed8446e82f0c8f4669cf2a92d29155a/scipion_em_novactf-3.0.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,167   Found link https://files.pythonhosted.org/packages/b9/ee/e55546b271a2511bf81c4bbc18ad018cdcfc840c7ea9ccc06f542d267c72/scipion-em-novactf-3.0.3.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.3
2024-06-10T12:06:18,167   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/67/8c/61ace2b43686141e47ebaa41e3361c83782e99916d65fd47dd0ae803a90d/scipion_em_novactf-3.0.3-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,167   Found link https://files.pythonhosted.org/packages/a1/10/83d0f5dc38e2b258f642b505d8f1362bbd9b189bb5d76b743c923630ab05/scipion-em-novactf-3.0.4.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.4
2024-06-10T12:06:18,167   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/82/c9/59ea577d150aa7a9ad596718b0d9af2644a70bcadda80c4e525636aba583/scipion_em_novactf-3.0.4-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,168   Found link https://files.pythonhosted.org/packages/10/bd/80900e405cb5add4147057b48e9586e14ce4267387e230a4c02c12c04828/scipion-em-novactf-3.0.5.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.0.5
2024-06-10T12:06:18,168   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/db/cf/97e973af7179891b26360b4b086ab5d0c83c8268fcfd06ab49f351e219e5/scipion_em_novactf-3.0.5-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,168   Found link https://files.pythonhosted.org/packages/b8/58/e851fe9f88278cf4eab9592da2c6e45ef8cb273aaca64e99c2cf48451402/scipion-em-novactf-3.1.1.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.1.1
2024-06-10T12:06:18,168   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/87/24/9bf265f8f3db0f51ff6dc178c9602dfe19f048eb903819c80bd4c0bb9288/scipion_em_novactf-3.1.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,169   Found link https://files.pythonhosted.org/packages/e6/4c/3bfbc0b1b6412a329c99070a6886b3e30ff2e77b089cbe27323bca5d0069/scipion-em-novactf-3.1.2.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.1.2
2024-06-10T12:06:18,169   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/28/72/5443f1e6ed9dc6d67a1a60eb50c330d0957944eafd8ce0a98efd49f50cb1/scipion_em_novactf-3.1.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,169   Found link https://files.pythonhosted.org/packages/6c/c1/d92c715b5e0806cedb6e529319b6fb414ad4ae67a66efc4c3b0bddbee14f/scipion-em-novactf-3.2.tar.gz (from https://pypi.org/simple/scipion-em-novactf/), version: 3.2
2024-06-10T12:06:18,169   Skipping link: No binaries permitted for scipion-em-novactf: https://files.pythonhosted.org/packages/1c/d5/8a44a0479bc9e82305a7a8cc515af4c478c27363496cea7c3d48ed971d38/scipion_em_novactf-3.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,170 Fetching project page and analyzing links: https://www.piwheels.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,170 Getting page https://www.piwheels.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,171 Found index url https://www.piwheels.org/simple/
2024-06-10T12:06:18,287 Fetched page https://www.piwheels.org/simple/scipion-em-novactf/ as text/html
2024-06-10T12:06:18,290   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.5-py3-none-any.whl#sha256=1c179fc32509f86f70336f58ae3e1855252ca900350b7e23101debe62e7fdb43 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,290   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.4-py3-none-any.whl#sha256=d33f2cf5ee480227b805b49574ebe34402aecd779d85b933bd893ebd90eb5615 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,291   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.3-py3-none-any.whl#sha256=d4e43ed85f0130816e128605c759ec9d80ce925c41f8bb7e33c58444843f5782 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,291   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.2-py3-none-any.whl#sha256=72cde7f2c20e33c3aef7e0704ca7d44d6174a17b92a426e65e34f3eb26bea38c (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,291   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.1-py3-none-any.whl#sha256=e7395936e3c005f68a86b6d8958e59668a3d1b0a554b01e91e653c08321116d8 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,291   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-3.0.0-py3-none-any.whl#sha256=bfca0facbe93c3886bdfd94fb75a506aad09d12f233381155db73b0fe9b7bc69 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,291   Skipping link: No binaries permitted for scipion-em-novactf: https://www.piwheels.org/simple/scipion-em-novactf/scipion_em_novactf-1.0.0-py3-none-any.whl#sha256=07b82090397b062887bc5f7aa0308b8d030052a805434028a24a2e0f9c5b3f69 (from https://www.piwheels.org/simple/scipion-em-novactf/)
2024-06-10T12:06:18,292 Skipping link: not a file: https://www.piwheels.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,292 Skipping link: not a file: https://pypi.org/simple/scipion-em-novactf/
2024-06-10T12:06:18,310 Given no hashes to check 1 links for project 'scipion-em-novactf': discarding no candidates
2024-06-10T12:06:18,327 Collecting scipion-em-novactf==3.2
2024-06-10T12:06:18,329   Created temporary directory: /tmp/pip-unpack-d77a5783
2024-06-10T12:06:18,372   Downloading scipion-em-novactf-3.2.tar.gz (28 kB)
2024-06-10T12:06:18,429   Added scipion-em-novactf==3.2 from https://files.pythonhosted.org/packages/6c/c1/d92c715b5e0806cedb6e529319b6fb414ad4ae67a66efc4c3b0bddbee14f/scipion-em-novactf-3.2.tar.gz to build tracker '/tmp/pip-build-tracker-v55hgiek'
2024-06-10T12:06:18,430   Running setup.py (path:/tmp/pip-wheel-tfl1jgut/scipion-em-novactf_3e0606fb416b4e1494288a963017d859/setup.py) egg_info for package scipion-em-novactf
2024-06-10T12:06:18,431   Created temporary directory: /tmp/pip-pip-egg-info-nus38l_z
2024-06-10T12:06:18,431   Preparing metadata (setup.py): started
2024-06-10T12:06:18,432   Running command python setup.py egg_info
2024-06-10T12:06:18,931   Traceback (most recent call last):
2024-06-10T12:06:18,931     File "<string>", line 2, in <module>
2024-06-10T12:06:18,932     File "<pip-setuptools-caller>", line 34, in <module>
2024-06-10T12:06:18,932     File "/tmp/pip-wheel-tfl1jgut/scipion-em-novactf_3e0606fb416b4e1494288a963017d859/setup.py", line 39, in <module>
2024-06-10T12:06:18,932       from novactf import __version__
2024-06-10T12:06:18,932     File "/tmp/pip-wheel-tfl1jgut/scipion-em-novactf_3e0606fb416b4e1494288a963017d859/novactf/__init__.py", line 28, in <module>
2024-06-10T12:06:18,932       import pwem
2024-06-10T12:06:18,933   ModuleNotFoundError: No module named 'pwem'
2024-06-10T12:06:18,982   ERROR: python setup.py egg_info exited with 1
2024-06-10T12:06:19,000   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2024-06-10T12:06:19,000   exec(compile('"'"''"'"''"'"'
2024-06-10T12:06:19,000   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2024-06-10T12:06:19,000   #
2024-06-10T12:06:19,000   # - It imports setuptools before invoking setup.py, to enable projects that directly
2024-06-10T12:06:19,000   #   import from `distutils.core` to work with newer packaging standards.
2024-06-10T12:06:19,000   # - It provides a clear error message when setuptools is not installed.
2024-06-10T12:06:19,000   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2024-06-10T12:06:19,000   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2024-06-10T12:06:19,000   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2024-06-10T12:06:19,000   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2024-06-10T12:06:19,000   import os, sys, tokenize
2024-06-10T12:06:19,000   
2024-06-10T12:06:19,000   try:
2024-06-10T12:06:19,000       import setuptools
2024-06-10T12:06:19,000   except ImportError as error:
2024-06-10T12:06:19,000       print(
2024-06-10T12:06:19,000           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2024-06-10T12:06:19,000           "the build environment.",
2024-06-10T12:06:19,000           file=sys.stderr,
2024-06-10T12:06:19,000       )
2024-06-10T12:06:19,000       sys.exit(1)
2024-06-10T12:06:19,000   
2024-06-10T12:06:19,000   __file__ = %r
2024-06-10T12:06:19,000   sys.argv[0] = __file__
2024-06-10T12:06:19,000   
2024-06-10T12:06:19,000   if os.path.exists(__file__):
2024-06-10T12:06:19,000       filename = __file__
2024-06-10T12:06:19,000       with tokenize.open(__file__) as f:
2024-06-10T12:06:19,000           setup_py_code = f.read()
2024-06-10T12:06:19,000   else:
2024-06-10T12:06:19,000       filename = "<auto-generated setuptools caller>"
2024-06-10T12:06:19,000       setup_py_code = "from setuptools import setup; setup()"
2024-06-10T12:06:19,000   
2024-06-10T12:06:19,000   exec(compile(setup_py_code, filename, "exec"))
2024-06-10T12:06:19,000   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-tfl1jgut/scipion-em-novactf_3e0606fb416b4e1494288a963017d859/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-nus38l_z[/]
2024-06-10T12:06:19,000   [bold magenta]cwd[/]: /tmp/pip-wheel-tfl1jgut/scipion-em-novactf_3e0606fb416b4e1494288a963017d859/
2024-06-10T12:06:19,000   Preparing metadata (setup.py): finished with status 'error'
2024-06-10T12:06:19,001 ERROR: metadata generation failed
2024-06-10T12:06:19,007 Exception information:
2024-06-10T12:06:19,007 Traceback (most recent call last):
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2024-06-10T12:06:19,007     call_subprocess(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2024-06-10T12:06:19,007     raise error
2024-06-10T12:06:19,007 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2024-06-10T12:06:19,007 
2024-06-10T12:06:19,007 The above exception was the direct cause of the following exception:
2024-06-10T12:06:19,007 
2024-06-10T12:06:19,007 Traceback (most recent call last):
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2024-06-10T12:06:19,007     status = run_func(*args)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 245, in wrapper
2024-06-10T12:06:19,007     return func(self, options, args)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2024-06-10T12:06:19,007     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve
2024-06-10T12:06:19,007     result = self._result = resolver.resolve(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2024-06-10T12:06:19,007     state = resolution.resolve(requirements, max_rounds=max_rounds)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2024-06-10T12:06:19,007     self._add_to_criteria(self.state.criteria, r, parent=None)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2024-06-10T12:06:19,007     if not criterion.candidates:
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2024-06-10T12:06:19,007     return bool(self._sequence)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2024-06-10T12:06:19,007     return any(self)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2024-06-10T12:06:19,007     return (c for c in iterator if id(c) not in self._incompatible_ids)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2024-06-10T12:06:19,007     candidate = func()
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 182, in _make_candidate_from_link
2024-06-10T12:06:19,007     base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 228, in _make_base_candidate_from_link
2024-06-10T12:06:19,007     self._link_candidate_cache[link] = LinkCandidate(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 290, in __init__
2024-06-10T12:06:19,007     super().__init__(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2024-06-10T12:06:19,007     self.dist = self._prepare()
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 222, in _prepare
2024-06-10T12:06:19,007     dist = self._prepare_distribution()
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 301, in _prepare_distribution
2024-06-10T12:06:19,007     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 525, in prepare_linked_requirement
2024-06-10T12:06:19,007     return self._prepare_linked_requirement(req, parallel_builds)
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 640, in _prepare_linked_requirement
2024-06-10T12:06:19,007     dist = _get_prepared_distribution(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution
2024-06-10T12:06:19,007     abstract_dist.prepare_distribution_metadata(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 67, in prepare_distribution_metadata
2024-06-10T12:06:19,007     self.req.prepare_metadata()
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/req/req_install.py", line 585, in prepare_metadata
2024-06-10T12:06:19,007     self.metadata_directory = generate_metadata_legacy(
2024-06-10T12:06:19,007   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2024-06-10T12:06:19,007     raise MetadataGenerationFailed(package_details=details) from error
2024-06-10T12:06:19,007 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2024-06-10T12:06:19,017 Removed scipion-em-novactf==3.2 from https://files.pythonhosted.org/packages/6c/c1/d92c715b5e0806cedb6e529319b6fb414ad4ae67a66efc4c3b0bddbee14f/scipion-em-novactf-3.2.tar.gz from build tracker '/tmp/pip-build-tracker-v55hgiek'
2024-06-10T12:06:19,018 Removed build tracker: '/tmp/pip-build-tracker-v55hgiek'