2024-06-13T15:28:36,243 Created temporary directory: /tmp/pip-build-tracker-g6hmnkhb
2024-06-13T15:28:36,245 Initialized build tracking at /tmp/pip-build-tracker-g6hmnkhb
2024-06-13T15:28:36,245 Created build tracker: /tmp/pip-build-tracker-g6hmnkhb
2024-06-13T15:28:36,245 Entered build tracker: /tmp/pip-build-tracker-g6hmnkhb
2024-06-13T15:28:36,245 Created temporary directory: /tmp/pip-wheel-eqljgiax
2024-06-13T15:28:36,250 Created temporary directory: /tmp/pip-ephem-wheel-cache-5ldfqogv
2024-06-13T15:28:36,273 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-13T15:28:36,277 2 location(s) to search for versions of vcf-subset:
2024-06-13T15:28:36,277 * https://pypi.org/simple/vcf-subset/
2024-06-13T15:28:36,277 * https://www.piwheels.org/simple/vcf-subset/
2024-06-13T15:28:36,277 Fetching project page and analyzing links: https://pypi.org/simple/vcf-subset/
2024-06-13T15:28:36,278 Getting page https://pypi.org/simple/vcf-subset/
2024-06-13T15:28:36,280 Found index url https://pypi.org/simple/
2024-06-13T15:28:36,332 Fetched page https://pypi.org/simple/vcf-subset/ as application/vnd.pypi.simple.v1+json
2024-06-13T15:28:36,333   Found link https://files.pythonhosted.org/packages/68/e0/a1fc01739e6486be8b1c8d66cd54056d2b0e2d55ec49686b0b086aa204ac/vcf_subset-1.0.0.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.0.0
2024-06-13T15:28:36,334   Found link https://files.pythonhosted.org/packages/e3/f0/fbedfe1b6255872b0ef4964143fd9f7c196fda57a7912dd025b7c7c6b67e/vcf_subset-1.1.0.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.1.0
2024-06-13T15:28:36,334 Fetching project page and analyzing links: https://www.piwheels.org/simple/vcf-subset/
2024-06-13T15:28:36,335 Getting page https://www.piwheels.org/simple/vcf-subset/
2024-06-13T15:28:36,336 Found index url https://www.piwheels.org/simple/
2024-06-13T15:28:36,407 Fetched page https://www.piwheels.org/simple/vcf-subset/ as text/html
2024-06-13T15:28:36,410   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=27666e9108370fcb2cb5ff8b60c17b5537e27e253e8b2a284952df7b6017ea58 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,410   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=27666e9108370fcb2cb5ff8b60c17b5537e27e253e8b2a284952df7b6017ea58 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,410   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e7956e85d5e03de680a8edeef2acff3678245470c9bbb1fc9ff3019434d41f40 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,411   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e7956e85d5e03de680a8edeef2acff3678245470c9bbb1fc9ff3019434d41f40 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,411   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=ed66b8e17ec20bbbd6714454c632a74bdb56b24fc633bb68360bfe0097479faf (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,411   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=ed66b8e17ec20bbbd6714454c632a74bdb56b24fc633bb68360bfe0097479faf (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-13T15:28:36,411 Skipping link: not a file: https://www.piwheels.org/simple/vcf-subset/
2024-06-13T15:28:36,411 Skipping link: not a file: https://pypi.org/simple/vcf-subset/
2024-06-13T15:28:36,429 Given no hashes to check 1 links for project 'vcf-subset': discarding no candidates
2024-06-13T15:28:36,445 Collecting vcf-subset==1.0.0
2024-06-13T15:28:36,448   Created temporary directory: /tmp/pip-unpack-6tuh1izh
2024-06-13T15:28:36,493   Downloading vcf_subset-1.0.0.tar.gz (2.5 kB)
2024-06-13T15:28:36,519   Added vcf-subset==1.0.0 from https://files.pythonhosted.org/packages/68/e0/a1fc01739e6486be8b1c8d66cd54056d2b0e2d55ec49686b0b086aa204ac/vcf_subset-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-g6hmnkhb'
2024-06-13T15:28:36,524   Created temporary directory: /tmp/pip-build-env-79lrrkfd
2024-06-13T15:28:36,534   Installing build dependencies: started
2024-06-13T15:28:36,535   Running command pip subprocess to install build dependencies
2024-06-13T15:28:39,197   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-06-13T15:28:39,715   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-13T15:28:41,226   Collecting setuptools>=42
2024-06-13T15:28:41,242     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-06-13T15:28:41,449   Collecting pybind11>=2.10.0
2024-06-13T15:28:41,465     Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.12.0-py3-none-any.whl (234 kB)
2024-06-13T15:28:43,209   Installing collected packages: setuptools, pybind11
2024-06-13T15:28:45,602     Creating /tmp/pip-build-env-79lrrkfd/overlay/bin
2024-06-13T15:28:45,604     changing mode of /tmp/pip-build-env-79lrrkfd/overlay/bin/pybind11-config to 755
2024-06-13T15:28:45,618   Successfully installed pybind11-2.12.0 setuptools-70.0.0
2024-06-13T15:28:46,061   Installing build dependencies: finished with status 'done'
2024-06-13T15:28:46,066   Getting requirements to build wheel: started
2024-06-13T15:28:46,067   Running command Getting requirements to build wheel
2024-06-13T15:28:46,619   /tmp/pip-build-env-79lrrkfd/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing 'v1.0.0' to '1.0.0'
2024-06-13T15:28:46,620     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-13T15:28:46,659   running egg_info
2024-06-13T15:28:46,666   writing vcf_subset.egg-info/PKG-INFO
2024-06-13T15:28:46,669   writing dependency_links to vcf_subset.egg-info/dependency_links.txt
2024-06-13T15:28:46,671   writing top-level names to vcf_subset.egg-info/top_level.txt
2024-06-13T15:28:46,686   reading manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:28:46,690   writing manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:28:46,760   Getting requirements to build wheel: finished with status 'done'
2024-06-13T15:28:46,771   Installing backend dependencies: started
2024-06-13T15:28:46,772   Running command pip subprocess to install backend dependencies
2024-06-13T15:28:47,944   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-06-13T15:28:48,463   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-13T15:28:48,803   Collecting wheel
2024-06-13T15:28:48,820     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-06-13T15:28:50,279   Installing collected packages: wheel
2024-06-13T15:28:50,502     Creating /tmp/pip-build-env-79lrrkfd/normal/bin
2024-06-13T15:28:50,504     changing mode of /tmp/pip-build-env-79lrrkfd/normal/bin/wheel to 755
2024-06-13T15:28:50,516   Successfully installed wheel-0.43.0
2024-06-13T15:28:50,908   Installing backend dependencies: finished with status 'done'
2024-06-13T15:28:50,910   Created temporary directory: /tmp/pip-modern-metadata-_n235dqu
2024-06-13T15:28:50,913   Preparing metadata (pyproject.toml): started
2024-06-13T15:28:50,914   Running command Preparing metadata (pyproject.toml)
2024-06-13T15:28:51,475   /tmp/pip-build-env-79lrrkfd/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing 'v1.0.0' to '1.0.0'
2024-06-13T15:28:51,475     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-13T15:28:51,518   running dist_info
2024-06-13T15:28:51,527   creating /tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info
2024-06-13T15:28:51,532   writing /tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/PKG-INFO
2024-06-13T15:28:51,535   writing dependency_links to /tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/dependency_links.txt
2024-06-13T15:28:51,537   writing top-level names to /tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/top_level.txt
2024-06-13T15:28:51,539   writing manifest file '/tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:28:51,552   reading manifest file '/tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:28:51,556   writing manifest file '/tmp/pip-modern-metadata-_n235dqu/vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:28:51,557   creating '/tmp/pip-modern-metadata-_n235dqu/vcf_subset-1.0.0.dist-info'
2024-06-13T15:28:51,710   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-13T15:28:51,716   Source in /tmp/pip-wheel-eqljgiax/vcf-subset_203c8e0a199a4dbcab8036efbfbde0ff has version 1.0.0, which satisfies requirement vcf-subset==1.0.0 from https://files.pythonhosted.org/packages/68/e0/a1fc01739e6486be8b1c8d66cd54056d2b0e2d55ec49686b0b086aa204ac/vcf_subset-1.0.0.tar.gz
2024-06-13T15:28:51,717   Removed vcf-subset==1.0.0 from https://files.pythonhosted.org/packages/68/e0/a1fc01739e6486be8b1c8d66cd54056d2b0e2d55ec49686b0b086aa204ac/vcf_subset-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-g6hmnkhb'
2024-06-13T15:28:51,723 Created temporary directory: /tmp/pip-unpack-db0b519a
2024-06-13T15:28:51,724 Created temporary directory: /tmp/pip-unpack-jsutjt5s
2024-06-13T15:28:51,726 Building wheels for collected packages: vcf-subset
2024-06-13T15:28:51,729   Created temporary directory: /tmp/pip-wheel-ewzt1h4v
2024-06-13T15:28:51,730   Destination directory: /tmp/pip-wheel-ewzt1h4v
2024-06-13T15:28:51,732   Building wheel for vcf-subset (pyproject.toml): started
2024-06-13T15:28:51,733   Running command Building wheel for vcf-subset (pyproject.toml)
2024-06-13T15:28:52,265   /tmp/pip-build-env-79lrrkfd/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing 'v1.0.0' to '1.0.0'
2024-06-13T15:28:52,265     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-13T15:28:52,335   running bdist_wheel
2024-06-13T15:28:52,373   running build
2024-06-13T15:28:52,374   running build_ext
2024-06-13T15:28:52,382   building 'vcf_subset' extension
2024-06-13T15:28:52,382   creating build
2024-06-13T15:28:52,383   creating build/temp.linux-armv7l-cpython-39
2024-06-13T15:28:52,384   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=v1.0.0 -I/tmp/pip-build-env-79lrrkfd/overlay/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c vcf_subset.cpp -o build/temp.linux-armv7l-cpython-39/vcf_subset.o -fvisibility=hidden -g0 -std=c++2a -O3
2024-06-13T15:29:11,841   creating build/lib.linux-armv7l-cpython-39
2024-06-13T15:29:11,841   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/vcf_subset.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/vcf_subset.cpython-39-arm-linux-gnueabihf.so
2024-06-13T15:29:12,134   installing to build/bdist.linux-armv7l/wheel
2024-06-13T15:29:12,134   running install
2024-06-13T15:29:12,159   running install_lib
2024-06-13T15:29:12,166   creating build/bdist.linux-armv7l
2024-06-13T15:29:12,167   creating build/bdist.linux-armv7l/wheel
2024-06-13T15:29:12,168   copying build/lib.linux-armv7l-cpython-39/vcf_subset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2024-06-13T15:29:12,172   running install_egg_info
2024-06-13T15:29:12,183   running egg_info
2024-06-13T15:29:12,187   writing vcf_subset.egg-info/PKG-INFO
2024-06-13T15:29:12,190   writing dependency_links to vcf_subset.egg-info/dependency_links.txt
2024-06-13T15:29:12,191   writing top-level names to vcf_subset.egg-info/top_level.txt
2024-06-13T15:29:12,199   reading manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:29:12,202   writing manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-13T15:29:12,203   Copying vcf_subset.egg-info to build/bdist.linux-armv7l/wheel/vcf_subset-1.0.0-py3.9.egg-info
2024-06-13T15:29:12,213   running install_scripts
2024-06-13T15:29:12,255   creating build/bdist.linux-armv7l/wheel/vcf_subset-1.0.0.dist-info/WHEEL
2024-06-13T15:29:12,257   creating '/tmp/pip-wheel-ewzt1h4v/.tmp-mcftwtir/vcf_subset-1.0.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-13T15:29:12,287   adding 'vcf_subset.cpython-39-arm-linux-gnueabihf.so'
2024-06-13T15:29:12,290   adding 'vcf_subset-1.0.0.dist-info/METADATA'
2024-06-13T15:29:12,291   adding 'vcf_subset-1.0.0.dist-info/WHEEL'
2024-06-13T15:29:12,292   adding 'vcf_subset-1.0.0.dist-info/top_level.txt'
2024-06-13T15:29:12,293   adding 'vcf_subset-1.0.0.dist-info/RECORD'
2024-06-13T15:29:12,295   removing build/bdist.linux-armv7l/wheel
2024-06-13T15:29:12,384   Building wheel for vcf-subset (pyproject.toml): finished with status 'done'
2024-06-13T15:29:12,390   Created wheel for vcf-subset: filename=vcf_subset-1.0.0-cp39-cp39-linux_armv7l.whl size=64636 sha256=0798cb73a2a95eeb2ef976af580f57e7f81e9dd3558aa1140cd426052154500e
2024-06-13T15:29:12,391   Stored in directory: /tmp/pip-ephem-wheel-cache-5ldfqogv/wheels/60/ad/56/9c82832176bb75a82e31dcd4a4f3ef3c30c4c20fc92d190d9c
2024-06-13T15:29:12,401 Successfully built vcf-subset
2024-06-13T15:29:12,406 Removed build tracker: '/tmp/pip-build-tracker-g6hmnkhb'