2024-06-13T17:48:39,099 Created temporary directory: /tmp/pip-build-tracker-0xc98ed0 2024-06-13T17:48:39,102 Initialized build tracking at /tmp/pip-build-tracker-0xc98ed0 2024-06-13T17:48:39,102 Created build tracker: /tmp/pip-build-tracker-0xc98ed0 2024-06-13T17:48:39,103 Entered build tracker: /tmp/pip-build-tracker-0xc98ed0 2024-06-13T17:48:39,104 Created temporary directory: /tmp/pip-wheel-5dg4_w7l 2024-06-13T17:48:39,107 Created temporary directory: /tmp/pip-ephem-wheel-cache-ti1tbwu8 2024-06-13T17:48:39,129 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-13T17:48:39,132 2 location(s) to search for versions of biomero: 2024-06-13T17:48:39,132 * https://pypi.org/simple/biomero/ 2024-06-13T17:48:39,132 * https://www.piwheels.org/simple/biomero/ 2024-06-13T17:48:39,133 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-06-13T17:48:39,134 Getting page https://pypi.org/simple/biomero/ 2024-06-13T17:48:39,135 Found index url https://pypi.org/simple/ 2024-06-13T17:48:39,346 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-06-13T17:48:39,352 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,353 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-06-13T17:48:39,354 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,354 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-06-13T17:48:39,355 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,356 Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0 2024-06-13T17:48:39,357 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,357 Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0 2024-06-13T17:48:39,358 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,359 Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1 2024-06-13T17:48:39,360 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,361 Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0 2024-06-13T17:48:39,361 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,363 Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0 2024-06-13T17:48:39,363 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/f4/ca212a8abbb68d2c32d48cab43cf6fe1622a5317a4e4300154dafe9b9862/biomero-1.7.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,364 Found link https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.1 2024-06-13T17:48:39,364 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/21/d9/c167814a1abc31271e77ad77422f04554cd41b18f62572e12c4f57e0d446/biomero-1.8.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,365 Found link https://files.pythonhosted.org/packages/c4/f3/5e41f475114acc86b9c5fc20fe702136efe2cfd9a93d877db1b6dd619297/biomero-1.8.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.8.0 2024-06-13T17:48:39,366 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/2b/97/0854245dad0152c2df83582e7802735b6c46e4ee97aaefa0252ee23af76c/biomero-1.9.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,367 Found link https://files.pythonhosted.org/packages/22/4f/1ad8dbbd2c2c569ce42ef22e424c10267f8af17ef0179fecc18dfaceb367/biomero-1.9.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.0 2024-06-13T17:48:39,367 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/38/23/7a5ce5588c26a7a8fd6da2a6dfd96b002cae0d52648df25c5e4526e0b84c/biomero-1.9.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,368 Found link https://files.pythonhosted.org/packages/6d/6b/d8bec19f77accd9ea2a90b990bd0aceba02de375751a8acc5a690a1d816a/biomero-1.9.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.1 2024-06-13T17:48:39,369 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/5b/7f/35fdc1e2d4e84550a0cccaa9cac65a36da0b51857726558507f440a10a72/biomero-1.10.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,369 Found link https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.10.0 2024-06-13T17:48:39,370 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/1b/9e/0f43d61d43ab23b5da467fa52102764d3c5d5c72dcc0aeaae04458f79337/biomero-1.11.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,371 Found link https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.11.0 2024-06-13T17:48:39,371 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/80/33394f2d48314704be0ab054ddc7b5ffc9d3af6a4d1c1183881ad7def85c/biomero-1.12.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,372 Found link https://files.pythonhosted.org/packages/2b/bc/76419c54de3288560f410f4469990f18cccac71957f881b357b703c01520/biomero-1.12.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.12.0 2024-06-13T17:48:39,373 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/d7/ca/a4fb10933144426cb0c353a8ab2aa49d86ad4f3832182dc49999405ddfac/biomero-1.13.0a0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,374 Found link https://files.pythonhosted.org/packages/e8/e6/1ed470d252aa8a6de569cf0360388c6079dbdd1ddc62baacd4675bd4c045/biomero-1.13.0a0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.13.0a0 2024-06-13T17:48:39,375 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-06-13T17:48:39,375 Getting page https://www.piwheels.org/simple/biomero/ 2024-06-13T17:48:39,376 Found index url https://www.piwheels.org/simple/ 2024-06-13T17:48:39,561 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-06-13T17:48:39,566 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.12.0-py3-none-any.whl#sha256=44383523b887fe362fdf8d39f6fb26075a82cd1abbfc4165284629463333742e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,567 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.11.0-py3-none-any.whl#sha256=708af5176c818ccdadc0403f4584a53487f49346ae5de6c46343637b971637e5 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,567 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.10.0-py3-none-any.whl#sha256=686f8597edcf9f3aada4fc0833d1f0b9cf8cbd5f37fa2ff1f25714933a2b3692 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,568 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.1-py3-none-any.whl#sha256=4ac212ff38e26184afd600913e8895efd3480866ea109645285bd8602f184280 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,568 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.0-py3-none-any.whl#sha256=d7b46dbddbc02213c8058fff735666ca242165070470776408d141210b02cc6b (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,569 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.8.0-py3-none-any.whl#sha256=823968c9fd9c97aa196bb2d2b94d85245d2163842ba800ea938a1fdeb7be8b74 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,569 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.1-py3-none-any.whl#sha256=d2aec9750cfab56583a01cbd08b734569956b5d4a5a0c524e6b57bc8d76338b4 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,570 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.0-py3-none-any.whl#sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,570 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,571 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,571 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,572 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,573 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,574 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-13T17:48:39,574 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-06-13T17:48:39,575 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-06-13T17:48:39,596 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-06-13T17:48:39,615 Collecting biomero==1.13.0a0 2024-06-13T17:48:39,617 Created temporary directory: /tmp/pip-unpack-fat99qq0 2024-06-13T17:48:39,841 Downloading biomero-1.13.0a0.tar.gz (1.1 MB) 2024-06-13T17:48:40,208 Added biomero==1.13.0a0 from https://files.pythonhosted.org/packages/e8/e6/1ed470d252aa8a6de569cf0360388c6079dbdd1ddc62baacd4675bd4c045/biomero-1.13.0a0.tar.gz to build tracker '/tmp/pip-build-tracker-0xc98ed0' 2024-06-13T17:48:40,214 Created temporary directory: /tmp/pip-build-env-yne8orw1 2024-06-13T17:48:40,218 Installing build dependencies: started 2024-06-13T17:48:40,219 Running command pip subprocess to install build dependencies 2024-06-13T17:48:41,402 Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11) 2024-06-13T17:48:41,925 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-13T17:48:43,404 Collecting setuptools>=45 2024-06-13T17:48:43,418 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB) 2024-06-13T17:48:43,737 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-06-13T17:48:43,751 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-06-13T17:48:44,073 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-06-13T17:48:44,085 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-06-13T17:48:46,768 Installing collected packages: setuptools, packaging, setuptools_scm 2024-06-13T17:48:49,558 Successfully installed packaging-24.1 setuptools-70.0.0 setuptools_scm-8.1.0 2024-06-13T17:48:50,067 Installing build dependencies: finished with status 'done' 2024-06-13T17:48:50,071 Getting requirements to build wheel: started 2024-06-13T17:48:50,072 Running command Getting requirements to build wheel 2024-06-13T17:48:50,923 running egg_info 2024-06-13T17:48:50,928 writing biomero.egg-info/PKG-INFO 2024-06-13T17:48:50,934 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-06-13T17:48:50,937 writing requirements to biomero.egg-info/requires.txt 2024-06-13T17:48:50,938 writing top-level names to biomero.egg-info/top_level.txt 2024-06-13T17:48:50,987 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-13T17:48:50,990 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:50,993 reading manifest template 'MANIFEST.in' 2024-06-13T17:48:51,003 adding license file 'LICENSE' 2024-06-13T17:48:51,006 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:51,127 Getting requirements to build wheel: finished with status 'done' 2024-06-13T17:48:51,164 Installing backend dependencies: started 2024-06-13T17:48:51,165 Running command pip subprocess to install backend dependencies 2024-06-13T17:48:52,465 Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11) 2024-06-13T17:48:53,018 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-13T17:48:53,493 Collecting wheel 2024-06-13T17:48:53,512 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-06-13T17:48:55,928 Installing collected packages: wheel 2024-06-13T17:48:56,161 Creating /tmp/pip-build-env-yne8orw1/normal/local/bin 2024-06-13T17:48:56,163 changing mode of /tmp/pip-build-env-yne8orw1/normal/local/bin/wheel to 755 2024-06-13T17:48:56,175 Successfully installed wheel-0.43.0 2024-06-13T17:48:56,633 Installing backend dependencies: finished with status 'done' 2024-06-13T17:48:56,635 Created temporary directory: /tmp/pip-modern-metadata-_rb1au1u 2024-06-13T17:48:56,638 Preparing metadata (pyproject.toml): started 2024-06-13T17:48:56,639 Running command Preparing metadata (pyproject.toml) 2024-06-13T17:48:57,533 running dist_info 2024-06-13T17:48:57,539 creating /tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info 2024-06-13T17:48:57,544 writing /tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/PKG-INFO 2024-06-13T17:48:57,552 writing dependency_links to /tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/dependency_links.txt 2024-06-13T17:48:57,557 writing requirements to /tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/requires.txt 2024-06-13T17:48:57,558 writing top-level names to /tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/top_level.txt 2024-06-13T17:48:57,560 writing manifest file '/tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:57,605 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-13T17:48:57,609 reading manifest file '/tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:57,611 reading manifest template 'MANIFEST.in' 2024-06-13T17:48:57,621 adding license file 'LICENSE' 2024-06-13T17:48:57,623 writing manifest file '/tmp/pip-modern-metadata-_rb1au1u/biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:57,624 creating '/tmp/pip-modern-metadata-_rb1au1u/biomero-1.13.0a0.dist-info' 2024-06-13T17:48:57,791 Preparing metadata (pyproject.toml): finished with status 'done' 2024-06-13T17:48:57,801 Source in /tmp/pip-wheel-5dg4_w7l/biomero_dd88ba0e891446dd8bd38fdcd25bc0c1 has version 1.13.0a0, which satisfies requirement biomero==1.13.0a0 from https://files.pythonhosted.org/packages/e8/e6/1ed470d252aa8a6de569cf0360388c6079dbdd1ddc62baacd4675bd4c045/biomero-1.13.0a0.tar.gz 2024-06-13T17:48:57,802 Removed biomero==1.13.0a0 from https://files.pythonhosted.org/packages/e8/e6/1ed470d252aa8a6de569cf0360388c6079dbdd1ddc62baacd4675bd4c045/biomero-1.13.0a0.tar.gz from build tracker '/tmp/pip-build-tracker-0xc98ed0' 2024-06-13T17:48:57,814 Created temporary directory: /tmp/pip-unpack-4rmov9j2 2024-06-13T17:48:57,815 Created temporary directory: /tmp/pip-unpack-3j4jsijw 2024-06-13T17:48:57,837 Building wheels for collected packages: biomero 2024-06-13T17:48:57,842 Created temporary directory: /tmp/pip-wheel-4dddgh3c 2024-06-13T17:48:57,842 Destination directory: /tmp/pip-wheel-4dddgh3c 2024-06-13T17:48:57,845 Building wheel for biomero (pyproject.toml): started 2024-06-13T17:48:57,846 Running command Building wheel for biomero (pyproject.toml) 2024-06-13T17:48:58,699 running bdist_wheel 2024-06-13T17:48:58,721 running build 2024-06-13T17:48:58,721 running build_py 2024-06-13T17:48:58,727 creating build 2024-06-13T17:48:58,727 creating build/lib 2024-06-13T17:48:58,728 creating build/lib/docs 2024-06-13T17:48:58,730 copying docs/conf.py -> build/lib/docs 2024-06-13T17:48:58,732 creating build/lib/resources 2024-06-13T17:48:58,733 copying resources/__init__.py -> build/lib/resources 2024-06-13T17:48:58,735 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-06-13T17:48:58,737 creating build/lib/biomero 2024-06-13T17:48:58,738 copying biomero/slurm_client.py -> build/lib/biomero 2024-06-13T17:48:58,742 copying biomero/__init__.py -> build/lib/biomero 2024-06-13T17:48:58,743 copying biomero/constants.py -> build/lib/biomero 2024-06-13T17:48:58,746 creating build/lib/tests 2024-06-13T17:48:58,746 creating build/lib/tests/unit 2024-06-13T17:48:58,747 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-06-13T17:48:58,750 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-06-13T17:48:58,752 creating build/lib/tests/integration 2024-06-13T17:48:58,753 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-06-13T17:48:58,755 running egg_info 2024-06-13T17:48:58,762 writing biomero.egg-info/PKG-INFO 2024-06-13T17:48:58,768 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-06-13T17:48:58,770 writing requirements to biomero.egg-info/requires.txt 2024-06-13T17:48:58,771 writing top-level names to biomero.egg-info/top_level.txt 2024-06-13T17:48:58,801 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-13T17:48:58,804 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:58,808 reading manifest template 'MANIFEST.in' 2024-06-13T17:48:58,817 adding license file 'LICENSE' 2024-06-13T17:48:58,820 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-13T17:48:58,826 copying docs/Makefile -> build/lib/docs 2024-06-13T17:48:58,829 copying docs/biomero.rst -> build/lib/docs 2024-06-13T17:48:58,831 copying docs/index.rst -> build/lib/docs 2024-06-13T17:48:58,833 copying docs/make.bat -> build/lib/docs 2024-06-13T17:48:58,835 copying docs/modules.rst -> build/lib/docs 2024-06-13T17:48:58,836 copying docs/readme_link.md -> build/lib/docs 2024-06-13T17:48:58,838 copying docs/requirements.txt -> build/lib/docs 2024-06-13T17:48:58,840 copying docs/tutorial_link.md -> build/lib/docs 2024-06-13T17:48:58,842 copying resources/convert_job_array.sh -> build/lib/resources 2024-06-13T17:48:58,844 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-06-13T17:48:58,846 copying resources/convert_zarr_to_tiff.dockerfile -> build/lib/resources 2024-06-13T17:48:58,848 copying resources/example.config -> build/lib/resources 2024-06-13T17:48:58,850 copying resources/job_template.sh -> build/lib/resources 2024-06-13T17:48:58,852 copying resources/pull_images.sh -> build/lib/resources 2024-06-13T17:48:58,854 copying resources/slurm-config.ini -> build/lib/resources 2024-06-13T17:48:58,857 creating build/lib/resources/tutorials 2024-06-13T17:48:58,858 copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials 2024-06-13T17:48:58,861 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-06-13T17:48:58,863 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-06-13T17:48:58,866 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-06-13T17:48:58,868 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-06-13T17:48:58,871 creating build/lib/resources/tutorials/images 2024-06-13T17:48:58,872 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,880 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,888 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,892 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,898 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,901 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,905 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,910 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-06-13T17:48:58,927 installing to build/bdist.linux-armv7l/wheel 2024-06-13T17:48:58,928 running install 2024-06-13T17:48:58,951 running install_lib 2024-06-13T17:48:58,957 creating build/bdist.linux-armv7l 2024-06-13T17:48:58,957 creating build/bdist.linux-armv7l/wheel 2024-06-13T17:48:58,959 creating build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,960 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,962 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,963 copying build/lib/docs/biomero.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,965 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,967 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,968 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,970 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,971 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,973 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-06-13T17:48:58,975 creating build/bdist.linux-armv7l/wheel/tests 2024-06-13T17:48:58,976 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-06-13T17:48:58,977 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-06-13T17:48:58,981 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-06-13T17:48:58,983 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-06-13T17:48:58,983 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-06-13T17:48:58,986 creating build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:58,987 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:58,989 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:58,990 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:58,992 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:58,994 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:58,995 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:58,998 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:59,001 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:59,004 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,005 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,009 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,016 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,026 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,028 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,031 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,037 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,040 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-13T17:48:59,043 copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:59,045 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-13T17:48:59,047 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:59,050 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:59,051 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:59,053 copying build/lib/resources/convert_zarr_to_tiff.dockerfile -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:59,054 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-06-13T17:48:59,056 creating build/bdist.linux-armv7l/wheel/biomero 2024-06-13T17:48:59,057 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-13T17:48:59,061 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-13T17:48:59,062 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-13T17:48:59,064 running install_egg_info 2024-06-13T17:48:59,069 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.13.0a0-py3.11.egg-info 2024-06-13T17:48:59,079 running install_scripts 2024-06-13T17:48:59,098 creating build/bdist.linux-armv7l/wheel/biomero-1.13.0a0.dist-info/WHEEL 2024-06-13T17:48:59,101 creating '/tmp/pip-wheel-4dddgh3c/.tmp-axrfl8h1/biomero-1.13.0a0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-13T17:48:59,103 adding 'biomero/__init__.py' 2024-06-13T17:48:59,104 adding 'biomero/constants.py' 2024-06-13T17:48:59,114 adding 'biomero/slurm_client.py' 2024-06-13T17:48:59,117 adding 'docs/Makefile' 2024-06-13T17:48:59,119 adding 'docs/biomero.rst' 2024-06-13T17:48:59,120 adding 'docs/conf.py' 2024-06-13T17:48:59,121 adding 'docs/index.rst' 2024-06-13T17:48:59,123 adding 'docs/make.bat' 2024-06-13T17:48:59,124 adding 'docs/modules.rst' 2024-06-13T17:48:59,125 adding 'docs/readme_link.md' 2024-06-13T17:48:59,126 adding 'docs/requirements.txt' 2024-06-13T17:48:59,127 adding 'docs/tutorial_link.md' 2024-06-13T17:48:59,129 adding 'resources/__init__.py' 2024-06-13T17:48:59,130 adding 'resources/convert_job_array.sh' 2024-06-13T17:48:59,131 adding 'resources/convert_zarr_to_tiff.def' 2024-06-13T17:48:59,132 adding 'resources/convert_zarr_to_tiff.dockerfile' 2024-06-13T17:48:59,134 adding 'resources/convert_zarr_to_tiff.py' 2024-06-13T17:48:59,135 adding 'resources/example.config' 2024-06-13T17:48:59,136 adding 'resources/job_template.sh' 2024-06-13T17:48:59,137 adding 'resources/pull_images.sh' 2024-06-13T17:48:59,139 adding 'resources/slurm-config.ini' 2024-06-13T17:48:59,143 adding 'resources/tutorials/tutorial_Azure_slurm.md' 2024-06-13T17:48:59,145 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-06-13T17:48:59,147 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-06-13T17:48:59,150 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-06-13T17:48:59,154 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-06-13T17:48:59,194 adding 'resources/tutorials/images/Cells.tif' 2024-06-13T17:48:59,231 adding 'resources/tutorials/images/cellexpansion.png' 2024-06-13T17:48:59,242 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-06-13T17:48:59,265 adding 'resources/tutorials/images/nuclei_labels.png' 2024-06-13T17:48:59,268 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-06-13T17:48:59,271 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-06-13T17:48:59,275 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-06-13T17:48:59,281 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-06-13T17:48:59,283 adding 'tests/integration/__init__.py' 2024-06-13T17:48:59,285 adding 'tests/unit/__init__.py' 2024-06-13T17:48:59,289 adding 'tests/unit/test_slurm_client.py' 2024-06-13T17:48:59,291 adding 'biomero-1.13.0a0.dist-info/LICENSE' 2024-06-13T17:48:59,298 adding 'biomero-1.13.0a0.dist-info/METADATA' 2024-06-13T17:48:59,300 adding 'biomero-1.13.0a0.dist-info/WHEEL' 2024-06-13T17:48:59,301 adding 'biomero-1.13.0a0.dist-info/top_level.txt' 2024-06-13T17:48:59,302 adding 'biomero-1.13.0a0.dist-info/RECORD' 2024-06-13T17:48:59,316 removing build/bdist.linux-armv7l/wheel 2024-06-13T17:48:59,457 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-06-13T17:48:59,492 Created wheel for biomero: filename=biomero-1.13.0a0-py3-none-any.whl size=1094676 sha256=5a3ecd5d406d3df3c647dff1788fe445e6522116ff5780bb42164ac20997d426 2024-06-13T17:48:59,493 Stored in directory: /tmp/pip-ephem-wheel-cache-ti1tbwu8/wheels/d9/a2/d3/8dc7225ccba359317112c014cdf0a46f06c23da4cd3dbea7c0 2024-06-13T17:48:59,516 Successfully built biomero 2024-06-13T17:48:59,560 Removed build tracker: '/tmp/pip-build-tracker-0xc98ed0'