2024-06-14T15:15:02,013 Created temporary directory: /tmp/pip-build-tracker-8oflj4xl
2024-06-14T15:15:02,015 Initialized build tracking at /tmp/pip-build-tracker-8oflj4xl
2024-06-14T15:15:02,015 Created build tracker: /tmp/pip-build-tracker-8oflj4xl
2024-06-14T15:15:02,016 Entered build tracker: /tmp/pip-build-tracker-8oflj4xl
2024-06-14T15:15:02,017 Created temporary directory: /tmp/pip-wheel-0hl_x7wr
2024-06-14T15:15:02,020 Created temporary directory: /tmp/pip-ephem-wheel-cache-icvp040v
2024-06-14T15:15:02,042 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-14T15:15:02,046 2 location(s) to search for versions of brainglobe-atlasapi:
2024-06-14T15:15:02,046 * https://pypi.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,046 * https://www.piwheels.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,047 Fetching project page and analyzing links: https://pypi.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,047 Getting page https://pypi.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,049 Found index url https://pypi.org/simple/
2024-06-14T15:15:02,265 Fetched page https://pypi.org/simple/brainglobe-atlasapi/ as application/vnd.pypi.simple.v1+json
2024-06-14T15:15:02,269   Found link https://files.pythonhosted.org/packages/94/5d/aa9e95d6061393eb9f2184e2a9fdab7d9d404ffb9e8a92555689bc696017/brainglobe-atlasapi-2.0.0.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.0
2024-06-14T15:15:02,270   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/02/2d/b41a734b9d08e1e08e4090d1f3d69d880c8e11d96cf857a620264943cbb5/brainglobe_atlasapi-2.0.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,271   Found link https://files.pythonhosted.org/packages/22/6c/8007408026e0a98e0d9e7f5b2679ccacfe18c270480a09e75ff95f395ffe/brainglobe-atlasapi-2.0.1.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.1
2024-06-14T15:15:02,272   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/a6/d9/ea6b4b2e2d81d2c4d7512eb4f89d3185eb3f72acb208a81e232f00247ec1/brainglobe_atlasapi-2.0.1-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,273   Found link https://files.pythonhosted.org/packages/67/e4/e1268e42432b3be14f570730be1a3350333b8a85027c4156c4fee6057d77/brainglobe-atlasapi-2.0.2.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.2
2024-06-14T15:15:02,273   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/26/81/ff6f1ca65117f8e7ea4e840f90b77c0fbce04615f5bc52711c86ddb49ab0/brainglobe_atlasapi-2.0.2-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,274   Found link https://files.pythonhosted.org/packages/c4/0b/6907f5c2329bdadd7208a883c633c5c5da48beae9439aac0a8bc6f7aa967/brainglobe-atlasapi-2.0.3.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.3
2024-06-14T15:15:02,275   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/81/e7/b6504f081c4481580326c1eff097f5fcdda3cbcb3e467a52ed2a433f209b/brainglobe_atlasapi-2.0.3-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,276   Found link https://files.pythonhosted.org/packages/a1/05/63f30291d10561bdde617345d08a93cf222894873f3437868992c1e7e98e/brainglobe-atlasapi-2.0.4.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.4
2024-06-14T15:15:02,276   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/fc/16/86c8589b4f72708382411a9b5074572bf568b835ac9af963515cf0661b49/brainglobe_atlasapi-2.0.4-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,277   Found link https://files.pythonhosted.org/packages/89/d6/77bcf09daa8fb694f86b9544817a4f12db2f1b3f329a228e19c4d67108f9/brainglobe-atlasapi-2.0.5.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.5
2024-06-14T15:15:02,278   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/f4/90/4d74f8627c90886a5abb9cb7bc636d02c2a3bc94bf68683841695b8c4131/brainglobe_atlasapi-2.0.5-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,279   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/a8/dd/05f03d24fd57568fcd0b2125e9ce3ebf6ac6d5a94ae56d45b21d90700089/brainglobe_atlasapi-2.0.6-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,279   Found link https://files.pythonhosted.org/packages/cf/bf/0421d2ebcb609c5e5dc847b548a84a7d1d5f8bd48162663197c4391beb85/brainglobe_atlasapi-2.0.6.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9), version: 2.0.6
2024-06-14T15:15:02,280   Skipping link: No binaries permitted for brainglobe-atlasapi: https://files.pythonhosted.org/packages/42/95/25c5bd74960c52a79d19f38fcfc35962027212ceb2e96699230537590632/brainglobe_atlasapi-2.0.7-py3-none-any.whl (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10)
2024-06-14T15:15:02,281   Found link https://files.pythonhosted.org/packages/d3/03/88d1e39513ab5896b4e1f42c7dfefcaf2868120bee7e6d49a31036b0ca1c/brainglobe_atlasapi-2.0.7.tar.gz (from https://pypi.org/simple/brainglobe-atlasapi/) (requires-python:>=3.10), version: 2.0.7
2024-06-14T15:15:02,282 Fetching project page and analyzing links: https://www.piwheels.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,282 Getting page https://www.piwheels.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,284 Found index url https://www.piwheels.org/simple/
2024-06-14T15:15:02,511 Fetched page https://www.piwheels.org/simple/brainglobe-atlasapi/ as text/html
2024-06-14T15:15:02,514   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.6-py3-none-any.whl#sha256=8442140366929671318cb53f3d6cb3ce0e32a81a38010452de92ae767da3ce8f (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,515   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.5-py3-none-any.whl#sha256=cab96900cfc376f6e6574cd4a76faff1f9852825fd13a5602f7a1e2d7d72c630 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,516   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.4-py3-none-any.whl#sha256=0a7530f79c49e0c3943316ffabf7ffc0e551e85ff3080598473118f80dc2de5a (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,516   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.3-py3-none-any.whl#sha256=e09156e510d9f50b8ef4f233d9e1ff849730bc7e7c6637e6d213e3f234a524b6 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,517   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.2-py3-none-any.whl#sha256=d213d9e3582e85a7b61afbe4b42dd9d1d557b2b006fe549a46a00777a51ca3db (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,517   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.1-py3-none-any.whl#sha256=d73a30d618071567cc1cc17cc2a5c914b373403d252e2556b2c4c8460481ca92 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,518   Skipping link: No binaries permitted for brainglobe-atlasapi: https://www.piwheels.org/simple/brainglobe-atlasapi/brainglobe_atlasapi-2.0.0-py3-none-any.whl#sha256=08327d0766a86cc7dc8836cbced68c179e2f26baad4ae391d4440a8dd377a0f1 (from https://www.piwheels.org/simple/brainglobe-atlasapi/) (requires-python:>=3.9)
2024-06-14T15:15:02,519 Skipping link: not a file: https://www.piwheels.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,519 Skipping link: not a file: https://pypi.org/simple/brainglobe-atlasapi/
2024-06-14T15:15:02,540 Given no hashes to check 1 links for project 'brainglobe-atlasapi': discarding no candidates
2024-06-14T15:15:02,560 Collecting brainglobe-atlasapi==2.0.7
2024-06-14T15:15:02,563   Created temporary directory: /tmp/pip-unpack-1bugr0pn
2024-06-14T15:15:02,791   Downloading brainglobe_atlasapi-2.0.7.tar.gz (58 kB)
2024-06-14T15:15:02,940   Added brainglobe-atlasapi==2.0.7 from https://files.pythonhosted.org/packages/d3/03/88d1e39513ab5896b4e1f42c7dfefcaf2868120bee7e6d49a31036b0ca1c/brainglobe_atlasapi-2.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-8oflj4xl'
2024-06-14T15:15:02,948   Created temporary directory: /tmp/pip-build-env-72v4rxzu
2024-06-14T15:15:02,953   Installing build dependencies: started
2024-06-14T15:15:02,954   Running command pip subprocess to install build dependencies
2024-06-14T15:15:04,130   Using pip 24.0 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11)
2024-06-14T15:15:04,658   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-14T15:15:06,193   Collecting setuptools>=45
2024-06-14T15:15:06,209     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-06-14T15:15:06,448   Collecting wheel
2024-06-14T15:15:06,462     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-06-14T15:15:06,746   Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2)
2024-06-14T15:15:06,759     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB)
2024-06-14T15:15:07,095   Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2024-06-14T15:15:07,111     Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB)
2024-06-14T15:15:09,839   Installing collected packages: wheel, setuptools, packaging, setuptools_scm
2024-06-14T15:15:10,081     Creating /tmp/pip-build-env-72v4rxzu/overlay/local/bin
2024-06-14T15:15:10,083     changing mode of /tmp/pip-build-env-72v4rxzu/overlay/local/bin/wheel to 755
2024-06-14T15:15:12,859   Successfully installed packaging-24.1 setuptools-70.0.0 setuptools_scm-8.1.0 wheel-0.43.0
2024-06-14T15:15:13,388   Installing build dependencies: finished with status 'done'
2024-06-14T15:15:13,391   Getting requirements to build wheel: started
2024-06-14T15:15:13,393   Running command Getting requirements to build wheel
2024-06-14T15:15:14,297   running egg_info
2024-06-14T15:15:14,302   writing brainglobe_atlasapi.egg-info/PKG-INFO
2024-06-14T15:15:14,312   writing dependency_links to brainglobe_atlasapi.egg-info/dependency_links.txt
2024-06-14T15:15:14,314   writing entry points to brainglobe_atlasapi.egg-info/entry_points.txt
2024-06-14T15:15:14,319   writing requirements to brainglobe_atlasapi.egg-info/requires.txt
2024-06-14T15:15:14,320   writing top-level names to brainglobe_atlasapi.egg-info/top_level.txt
2024-06-14T15:15:14,363   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-06-14T15:15:14,367   reading manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:14,370   reading manifest template 'MANIFEST.in'
2024-06-14T15:15:14,371   warning: no files found matching 'requirements.txt'
2024-06-14T15:15:14,372   warning: no previously-included files found matching '.codecov.yml'
2024-06-14T15:15:14,373   warning: no previously-included files found matching '.pre-commit-config.yaml'
2024-06-14T15:15:14,373   warning: manifest_maker: MANIFEST.in, line 9: 'graft' expects a single <dir_pattern>

2024-06-14T15:15:14,375   no previously-included directories found matching 'tests'
2024-06-14T15:15:14,375   no previously-included directories found matching 'tutorials'
2024-06-14T15:15:14,376   no previously-included directories found matching 'brainglobe_atlasapi/atlas_generation/atlas_scripts/*'
2024-06-14T15:15:14,376   adding license file 'LICENSE'
2024-06-14T15:15:14,379   writing manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:14,510   Getting requirements to build wheel: finished with status 'done'
2024-06-14T15:15:14,521   Created temporary directory: /tmp/pip-modern-metadata-b2nlzhrs
2024-06-14T15:15:14,523   Preparing metadata (pyproject.toml): started
2024-06-14T15:15:14,525   Running command Preparing metadata (pyproject.toml)
2024-06-14T15:15:15,377   running dist_info
2024-06-14T15:15:15,383   creating /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info
2024-06-14T15:15:15,388   writing /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/PKG-INFO
2024-06-14T15:15:15,398   writing dependency_links to /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/dependency_links.txt
2024-06-14T15:15:15,400   writing entry points to /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/entry_points.txt
2024-06-14T15:15:15,404   writing requirements to /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/requires.txt
2024-06-14T15:15:15,405   writing top-level names to /tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/top_level.txt
2024-06-14T15:15:15,407   writing manifest file '/tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:15,446   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-06-14T15:15:15,449   reading manifest file '/tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:15,451   reading manifest template 'MANIFEST.in'
2024-06-14T15:15:15,452   warning: no files found matching 'requirements.txt'
2024-06-14T15:15:15,453   warning: no previously-included files found matching '.codecov.yml'
2024-06-14T15:15:15,454   warning: no previously-included files found matching '.pre-commit-config.yaml'
2024-06-14T15:15:15,454   warning: manifest_maker: MANIFEST.in, line 9: 'graft' expects a single <dir_pattern>

2024-06-14T15:15:15,455   no previously-included directories found matching 'tests'
2024-06-14T15:15:15,456   no previously-included directories found matching 'tutorials'
2024-06-14T15:15:15,457   no previously-included directories found matching 'brainglobe_atlasapi/atlas_generation/atlas_scripts/*'
2024-06-14T15:15:15,457   adding license file 'LICENSE'
2024-06-14T15:15:15,459   writing manifest file '/tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:15,460   creating '/tmp/pip-modern-metadata-b2nlzhrs/brainglobe_atlasapi-2.0.7.dist-info'
2024-06-14T15:15:15,631   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-14T15:15:15,637   Source in /tmp/pip-wheel-0hl_x7wr/brainglobe-atlasapi_0b071be25f6a45f8ba2cb3d2ff895fe8 has version 2.0.7, which satisfies requirement brainglobe-atlasapi==2.0.7 from https://files.pythonhosted.org/packages/d3/03/88d1e39513ab5896b4e1f42c7dfefcaf2868120bee7e6d49a31036b0ca1c/brainglobe_atlasapi-2.0.7.tar.gz
2024-06-14T15:15:15,638   Removed brainglobe-atlasapi==2.0.7 from https://files.pythonhosted.org/packages/d3/03/88d1e39513ab5896b4e1f42c7dfefcaf2868120bee7e6d49a31036b0ca1c/brainglobe_atlasapi-2.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-8oflj4xl'
2024-06-14T15:15:15,645 Created temporary directory: /tmp/pip-unpack-gloj3_tr
2024-06-14T15:15:15,646 Created temporary directory: /tmp/pip-unpack-i5mc1cy8
2024-06-14T15:15:15,708 Building wheels for collected packages: brainglobe-atlasapi
2024-06-14T15:15:15,712   Created temporary directory: /tmp/pip-wheel-2tot_j2_
2024-06-14T15:15:15,713   Destination directory: /tmp/pip-wheel-2tot_j2_
2024-06-14T15:15:15,715   Building wheel for brainglobe-atlasapi (pyproject.toml): started
2024-06-14T15:15:15,716   Running command Building wheel for brainglobe-atlasapi (pyproject.toml)
2024-06-14T15:15:16,575   running bdist_wheel
2024-06-14T15:15:16,597   running build
2024-06-14T15:15:16,598   running build_py
2024-06-14T15:15:16,606   creating build
2024-06-14T15:15:16,607   creating build/lib
2024-06-14T15:15:16,608   creating build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,609   copying brainglobe_atlasapi/core.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,611   copying brainglobe_atlasapi/list_atlases.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,613   copying brainglobe_atlasapi/utils.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,616   copying brainglobe_atlasapi/structure_tree_util.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,617   copying brainglobe_atlasapi/config.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,619   copying brainglobe_atlasapi/__init__.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,620   copying brainglobe_atlasapi/bg_atlas.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,622   copying brainglobe_atlasapi/structure_class.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,624   copying brainglobe_atlasapi/update_atlases.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,626   copying brainglobe_atlasapi/descriptors.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,627   copying brainglobe_atlasapi/cli.py -> build/lib/brainglobe_atlasapi
2024-06-14T15:15:16,630   creating build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,631   copying brainglobe_atlasapi/atlas_generation/metadata_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,633   copying brainglobe_atlasapi/atlas_generation/validate_atlases.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,635   copying brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,637   copying brainglobe_atlasapi/atlas_generation/stacks.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,638   copying brainglobe_atlasapi/atlas_generation/wrapup.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,641   copying brainglobe_atlasapi/atlas_generation/main_script.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,643   copying brainglobe_atlasapi/atlas_generation/mesh_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,645   copying brainglobe_atlasapi/atlas_generation/__init__.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,647   copying brainglobe_atlasapi/atlas_generation/volume_utils.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,648   copying brainglobe_atlasapi/atlas_generation/structures.py -> build/lib/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,651   creating build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,652   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/azba_zfish.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,654   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/osten_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,656   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_developmental_ccf_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,658   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/princeton_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,661   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/humanatlas.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,662   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/whs_sd_rat.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,665   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/perens_lsfm_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,667   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,669   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/__init__.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,670   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/admba_3d_dev_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,673   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,674   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/mpin_zfish.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,677   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_cord.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,679   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/template_script.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,681   copying brainglobe_atlasapi/atlas_generation/atlas_scripts/example_mouse.py -> build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,682   running egg_info
2024-06-14T15:15:16,687   writing brainglobe_atlasapi.egg-info/PKG-INFO
2024-06-14T15:15:16,696   writing dependency_links to brainglobe_atlasapi.egg-info/dependency_links.txt
2024-06-14T15:15:16,698   writing entry points to brainglobe_atlasapi.egg-info/entry_points.txt
2024-06-14T15:15:16,702   writing requirements to brainglobe_atlasapi.egg-info/requires.txt
2024-06-14T15:15:16,703   writing top-level names to brainglobe_atlasapi.egg-info/top_level.txt
2024-06-14T15:15:16,730   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-06-14T15:15:16,733   reading manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:16,736   reading manifest template 'MANIFEST.in'
2024-06-14T15:15:16,737   warning: no files found matching 'requirements.txt'
2024-06-14T15:15:16,738   warning: no previously-included files found matching '.codecov.yml'
2024-06-14T15:15:16,738   warning: no previously-included files found matching '.pre-commit-config.yaml'
2024-06-14T15:15:16,739   warning: manifest_maker: MANIFEST.in, line 9: 'graft' expects a single <dir_pattern>

2024-06-14T15:15:16,741   no previously-included directories found matching 'tests'
2024-06-14T15:15:16,741   no previously-included directories found matching 'tutorials'
2024-06-14T15:15:16,742   no previously-included directories found matching 'brainglobe_atlasapi/atlas_generation/atlas_scripts/*'
2024-06-14T15:15:16,742   adding license file 'LICENSE'
2024-06-14T15:15:16,745   writing manifest file 'brainglobe_atlasapi.egg-info/SOURCES.txt'
2024-06-14T15:15:16,759   installing to build/bdist.linux-armv7l/wheel
2024-06-14T15:15:16,760   running install
2024-06-14T15:15:16,784   running install_lib
2024-06-14T15:15:16,789   creating build/bdist.linux-armv7l
2024-06-14T15:15:16,790   creating build/bdist.linux-armv7l/wheel
2024-06-14T15:15:16,792   creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,793   copying build/lib/brainglobe_atlasapi/core.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,795   copying build/lib/brainglobe_atlasapi/list_atlases.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,798   copying build/lib/brainglobe_atlasapi/utils.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,800   copying build/lib/brainglobe_atlasapi/structure_tree_util.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,802   copying build/lib/brainglobe_atlasapi/config.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,804   copying build/lib/brainglobe_atlasapi/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,806   copying build/lib/brainglobe_atlasapi/bg_atlas.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,809   creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,809   copying build/lib/brainglobe_atlasapi/atlas_generation/metadata_utils.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,811   copying build/lib/brainglobe_atlasapi/atlas_generation/validate_atlases.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,814   copying build/lib/brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,816   copying build/lib/brainglobe_atlasapi/atlas_generation/stacks.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,817   copying build/lib/brainglobe_atlasapi/atlas_generation/wrapup.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,819   copying build/lib/brainglobe_atlasapi/atlas_generation/main_script.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,821   copying build/lib/brainglobe_atlasapi/atlas_generation/mesh_utils.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,824   copying build/lib/brainglobe_atlasapi/atlas_generation/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,825   copying build/lib/brainglobe_atlasapi/atlas_generation/volume_utils.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,827   copying build/lib/brainglobe_atlasapi/atlas_generation/structures.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation
2024-06-14T15:15:16,829   creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,830   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/azba_zfish.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,833   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/osten_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,835   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_developmental_ccf_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,838   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/princeton_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,840   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/humanatlas.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,843   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/whs_sd_rat.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,845   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/perens_lsfm_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,847   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,850   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,851   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/admba_3d_dev_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,854   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,855   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/mpin_zfish.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,858   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_cord.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,860   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/template_script.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,862   copying build/lib/brainglobe_atlasapi/atlas_generation/atlas_scripts/example_mouse.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi/atlas_generation/atlas_scripts
2024-06-14T15:15:16,864   copying build/lib/brainglobe_atlasapi/structure_class.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,865   copying build/lib/brainglobe_atlasapi/update_atlases.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,867   copying build/lib/brainglobe_atlasapi/descriptors.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,869   copying build/lib/brainglobe_atlasapi/cli.py -> build/bdist.linux-armv7l/wheel/brainglobe_atlasapi
2024-06-14T15:15:16,870   running install_egg_info
2024-06-14T15:15:16,876   Copying brainglobe_atlasapi.egg-info to build/bdist.linux-armv7l/wheel/brainglobe_atlasapi-2.0.7-py3.11.egg-info
2024-06-14T15:15:16,887   running install_scripts
2024-06-14T15:15:16,908   creating build/bdist.linux-armv7l/wheel/brainglobe_atlasapi-2.0.7.dist-info/WHEEL
2024-06-14T15:15:16,911   creating '/tmp/pip-wheel-2tot_j2_/.tmp-b97ub_br/brainglobe_atlasapi-2.0.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-14T15:15:16,913   adding 'brainglobe_atlasapi/__init__.py'
2024-06-14T15:15:16,915   adding 'brainglobe_atlasapi/bg_atlas.py'
2024-06-14T15:15:16,917   adding 'brainglobe_atlasapi/cli.py'
2024-06-14T15:15:16,918   adding 'brainglobe_atlasapi/config.py'
2024-06-14T15:15:16,920   adding 'brainglobe_atlasapi/core.py'
2024-06-14T15:15:16,922   adding 'brainglobe_atlasapi/descriptors.py'
2024-06-14T15:15:16,923   adding 'brainglobe_atlasapi/list_atlases.py'
2024-06-14T15:15:16,925   adding 'brainglobe_atlasapi/structure_class.py'
2024-06-14T15:15:16,926   adding 'brainglobe_atlasapi/structure_tree_util.py'
2024-06-14T15:15:16,927   adding 'brainglobe_atlasapi/update_atlases.py'
2024-06-14T15:15:16,929   adding 'brainglobe_atlasapi/utils.py'
2024-06-14T15:15:16,931   adding 'brainglobe_atlasapi/atlas_generation/__init__.py'
2024-06-14T15:15:16,932   adding 'brainglobe_atlasapi/atlas_generation/main_script.py'
2024-06-14T15:15:16,934   adding 'brainglobe_atlasapi/atlas_generation/mesh_utils.py'
2024-06-14T15:15:16,936   adding 'brainglobe_atlasapi/atlas_generation/metadata_utils.py'
2024-06-14T15:15:16,937   adding 'brainglobe_atlasapi/atlas_generation/stacks.py'
2024-06-14T15:15:16,938   adding 'brainglobe_atlasapi/atlas_generation/structure_json_to_csv.py'
2024-06-14T15:15:16,940   adding 'brainglobe_atlasapi/atlas_generation/structures.py'
2024-06-14T15:15:16,942   adding 'brainglobe_atlasapi/atlas_generation/validate_atlases.py'
2024-06-14T15:15:16,943   adding 'brainglobe_atlasapi/atlas_generation/volume_utils.py'
2024-06-14T15:15:16,945   adding 'brainglobe_atlasapi/atlas_generation/wrapup.py'
2024-06-14T15:15:16,946   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/__init__.py'
2024-06-14T15:15:16,948   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/admba_3d_dev_mouse.py'
2024-06-14T15:15:16,950   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_cord.py'
2024-06-14T15:15:16,952   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/allen_mouse.py'
2024-06-14T15:15:16,954   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/azba_zfish.py'
2024-06-14T15:15:16,955   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/example_mouse.py'
2024-06-14T15:15:16,957   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/humanatlas.py'
2024-06-14T15:15:16,959   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_developmental_ccf_mouse.py'
2024-06-14T15:15:16,960   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_mouse.py'
2024-06-14T15:15:16,962   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/mpin_zfish.py'
2024-06-14T15:15:16,963   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/osten_mouse.py'
2024-06-14T15:15:16,965   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/perens_lsfm_mouse.py'
2024-06-14T15:15:16,967   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/princeton_mouse.py'
2024-06-14T15:15:16,968   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/template_script.py'
2024-06-14T15:15:16,970   adding 'brainglobe_atlasapi/atlas_generation/atlas_scripts/whs_sd_rat.py'
2024-06-14T15:15:16,972   adding 'brainglobe_atlasapi-2.0.7.dist-info/LICENSE'
2024-06-14T15:15:16,974   adding 'brainglobe_atlasapi-2.0.7.dist-info/METADATA'
2024-06-14T15:15:16,975   adding 'brainglobe_atlasapi-2.0.7.dist-info/WHEEL'
2024-06-14T15:15:16,976   adding 'brainglobe_atlasapi-2.0.7.dist-info/entry_points.txt'
2024-06-14T15:15:16,977   adding 'brainglobe_atlasapi-2.0.7.dist-info/top_level.txt'
2024-06-14T15:15:16,978   adding 'brainglobe_atlasapi-2.0.7.dist-info/RECORD'
2024-06-14T15:15:16,981   removing build/bdist.linux-armv7l/wheel
2024-06-14T15:15:17,123   Building wheel for brainglobe-atlasapi (pyproject.toml): finished with status 'done'
2024-06-14T15:15:17,129   Created wheel for brainglobe-atlasapi: filename=brainglobe_atlasapi-2.0.7-py3-none-any.whl size=80854 sha256=cd1b23835969a6c3d600681c67279cef15a698a3cf8ad3b4157bee27138ff248
2024-06-14T15:15:17,130   Stored in directory: /tmp/pip-ephem-wheel-cache-icvp040v/wheels/a7/87/44/74faceeb83289593ff04124b513c60d3eef740610bea762d1c
2024-06-14T15:15:17,145 Successfully built brainglobe-atlasapi
2024-06-14T15:15:17,151 Removed build tracker: '/tmp/pip-build-tracker-8oflj4xl'