2024-06-18T09:47:46,862 Created temporary directory: /tmp/pip-build-tracker-_2lc2r_7
2024-06-18T09:47:46,863 Initialized build tracking at /tmp/pip-build-tracker-_2lc2r_7
2024-06-18T09:47:46,864 Created build tracker: /tmp/pip-build-tracker-_2lc2r_7
2024-06-18T09:47:46,864 Entered build tracker: /tmp/pip-build-tracker-_2lc2r_7
2024-06-18T09:47:46,865 Created temporary directory: /tmp/pip-wheel-f5iyjk_9
2024-06-18T09:47:46,869 Created temporary directory: /tmp/pip-ephem-wheel-cache-5i1cprdh
2024-06-18T09:47:46,891 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-18T09:47:46,894 2 location(s) to search for versions of nnunetv2-bm-custom:
2024-06-18T09:47:46,894 * https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:46,894 * https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:46,895 Fetching project page and analyzing links: https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:46,896 Getting page https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:46,898 Found index url https://pypi.org/simple/
2024-06-18T09:47:47,114 Fetched page https://pypi.org/simple/nnunetv2-bm-custom/ as application/vnd.pypi.simple.v1+json
2024-06-18T09:47:47,115   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://files.pythonhosted.org/packages/d2/cb/f809cd3fa316db370dd94a85f2f465cd8fad099a59d30697b5056b1a88f5/nnunetv2_bm_custom-2.5-py3-none-any.whl (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-18T09:47:47,116   Found link https://files.pythonhosted.org/packages/8b/f0/2c495096ef8c0545849af606524bc9403a7e12d3e4f4ea5a9690bde89f5a/nnunetv2_bm_custom-2.5.tar.gz (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9), version: 2.5
2024-06-18T09:47:47,117   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://files.pythonhosted.org/packages/b2/b4/93d4521b25803d4f8c385ef05f8098536fae28da92e30a25706d3aa8cc19/nnunetv2_bm_custom-2.5.1-py3-none-any.whl (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-18T09:47:47,118   Found link https://files.pythonhosted.org/packages/81/09/6f1125669f8b3b18e8bf33188204f52d31ac088e594a196584d796a3aa53/nnunetv2_bm_custom-2.5.1.tar.gz (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9), version: 2.5.1
2024-06-18T09:47:47,119 Fetching project page and analyzing links: https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:47,120 Getting page https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:47,121 Found index url https://www.piwheels.org/simple/
2024-06-18T09:47:47,357 Fetched page https://www.piwheels.org/simple/nnunetv2-bm-custom/ as text/html
2024-06-18T09:47:47,359   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://www.piwheels.org/simple/nnunetv2-bm-custom/nnunetv2_bm_custom-2.5-py3-none-any.whl#sha256=5aa2678488762dc6e106f5926ac8a1822d4c6d4c506bbfb3cd0554cbfe61ae6a (from https://www.piwheels.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-18T09:47:47,360 Skipping link: not a file: https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:47,361 Skipping link: not a file: https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-18T09:47:47,379 Given no hashes to check 1 links for project 'nnunetv2-bm-custom': discarding no candidates
2024-06-18T09:47:47,397 Collecting nnunetv2-bm-custom==2.5.1
2024-06-18T09:47:47,400   Created temporary directory: /tmp/pip-unpack-cktw6qzg
2024-06-18T09:47:47,619   Downloading nnunetv2_bm_custom-2.5.1.tar.gz (185 kB)
2024-06-18T09:47:48,060   Added nnunetv2-bm-custom==2.5.1 from https://files.pythonhosted.org/packages/81/09/6f1125669f8b3b18e8bf33188204f52d31ac088e594a196584d796a3aa53/nnunetv2_bm_custom-2.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-_2lc2r_7'
2024-06-18T09:47:48,066   Created temporary directory: /tmp/pip-build-env-1c0by5yc
2024-06-18T09:47:48,071   Installing build dependencies: started
2024-06-18T09:47:48,073   Running command pip subprocess to install build dependencies
2024-06-18T09:47:49,218   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-06-18T09:47:49,721   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-18T09:47:51,418   Collecting setuptools>=67.8.0
2024-06-18T09:47:51,465     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-06-18T09:47:54,096   Installing collected packages: setuptools
2024-06-18T09:47:56,508   Successfully installed setuptools-70.0.0
2024-06-18T09:47:57,065   Installing build dependencies: finished with status 'done'
2024-06-18T09:47:57,068   Getting requirements to build wheel: started
2024-06-18T09:47:57,070   Running command Getting requirements to build wheel
2024-06-18T09:47:57,881   running egg_info
2024-06-18T09:47:57,885   writing nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-18T09:47:57,890   writing dependency_links to nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-18T09:47:57,893   writing entry points to nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-18T09:47:57,895   writing requirements to nnunetv2_bm_custom.egg-info/requires.txt
2024-06-18T09:47:57,896   writing top-level names to nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-18T09:47:57,956   reading manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:47:57,962   adding license file 'LICENSE'
2024-06-18T09:47:57,971   writing manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:47:58,086   Getting requirements to build wheel: finished with status 'done'
2024-06-18T09:47:58,094   Installing backend dependencies: started
2024-06-18T09:47:58,095   Running command pip subprocess to install backend dependencies
2024-06-18T09:47:59,219   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-06-18T09:47:59,714   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-18T09:48:00,392   Collecting wheel
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2024-06-18T09:48:02,724   Installing collected packages: wheel
2024-06-18T09:48:02,945     Creating /tmp/pip-build-env-1c0by5yc/normal/local/bin
2024-06-18T09:48:02,947     changing mode of /tmp/pip-build-env-1c0by5yc/normal/local/bin/wheel to 755
2024-06-18T09:48:02,959   Successfully installed wheel-0.43.0
2024-06-18T09:48:03,474   Installing backend dependencies: finished with status 'done'
2024-06-18T09:48:03,476   Created temporary directory: /tmp/pip-modern-metadata-3eegcqek
2024-06-18T09:48:03,478   Preparing metadata (pyproject.toml): started
2024-06-18T09:48:03,480   Running command Preparing metadata (pyproject.toml)
2024-06-18T09:48:04,322   running dist_info
2024-06-18T09:48:04,326   creating /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info
2024-06-18T09:48:04,330   writing /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-18T09:48:04,335   writing dependency_links to /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-18T09:48:04,338   writing entry points to /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-18T09:48:04,340   writing requirements to /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/requires.txt
2024-06-18T09:48:04,342   writing top-level names to /tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-18T09:48:04,343   writing manifest file '/tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:48:04,416   reading manifest file '/tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:48:04,418   adding license file 'LICENSE'
2024-06-18T09:48:04,425   writing manifest file '/tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:48:04,427   creating '/tmp/pip-modern-metadata-3eegcqek/nnunetv2_bm_custom-2.5.1.dist-info'
2024-06-18T09:48:04,586   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-18T09:48:04,593   Source in /tmp/pip-wheel-f5iyjk_9/nnunetv2-bm-custom_6de909f54a184a1e84e9b4e858897100 has version 2.5.1, which satisfies requirement nnunetv2-bm-custom==2.5.1 from https://files.pythonhosted.org/packages/81/09/6f1125669f8b3b18e8bf33188204f52d31ac088e594a196584d796a3aa53/nnunetv2_bm_custom-2.5.1.tar.gz
2024-06-18T09:48:04,595   Removed nnunetv2-bm-custom==2.5.1 from https://files.pythonhosted.org/packages/81/09/6f1125669f8b3b18e8bf33188204f52d31ac088e594a196584d796a3aa53/nnunetv2_bm_custom-2.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-_2lc2r_7'
2024-06-18T09:48:04,604 Created temporary directory: /tmp/pip-unpack-5o3lie6d
2024-06-18T09:48:04,605 Created temporary directory: /tmp/pip-unpack-y3m8xm5m
2024-06-18T09:48:04,644 Building wheels for collected packages: nnunetv2-bm-custom
2024-06-18T09:48:04,649   Created temporary directory: /tmp/pip-wheel-8wn1dqqm
2024-06-18T09:48:04,649   Destination directory: /tmp/pip-wheel-8wn1dqqm
2024-06-18T09:48:04,651   Building wheel for nnunetv2-bm-custom (pyproject.toml): started
2024-06-18T09:48:04,652   Running command Building wheel for nnunetv2-bm-custom (pyproject.toml)
2024-06-18T09:48:05,426   running bdist_wheel
2024-06-18T09:48:05,442   running build
2024-06-18T09:48:05,443   running build_py
2024-06-18T09:48:05,447   creating build
2024-06-18T09:48:05,447   creating build/lib
2024-06-18T09:48:05,448   creating build/lib/nnunetv2
2024-06-18T09:48:05,449   copying nnunetv2/configuration.py -> build/lib/nnunetv2
2024-06-18T09:48:05,451   copying nnunetv2/paths.py -> build/lib/nnunetv2
2024-06-18T09:48:05,453   copying nnunetv2/__init__.py -> build/lib/nnunetv2
2024-06-18T09:48:05,455   creating build/lib/documentation
2024-06-18T09:48:05,456   copying documentation/__init__.py -> build/lib/documentation
2024-06-18T09:48:05,458   creating build/lib/nnunetv2/utilities
2024-06-18T09:48:05,459   copying nnunetv2/utilities/helpers.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,461   copying nnunetv2/utilities/overlay_plots.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,463   copying nnunetv2/utilities/file_path_utilities.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,465   copying nnunetv2/utilities/dataset_name_id_conversion.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,467   copying nnunetv2/utilities/utils.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,469   copying nnunetv2/utilities/ddp_allgather.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,470   copying nnunetv2/utilities/default_n_proc_DA.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,472   copying nnunetv2/utilities/json_export.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,474   copying nnunetv2/utilities/find_class_by_name.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,476   copying nnunetv2/utilities/crossval_split.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,477   copying nnunetv2/utilities/collate_outputs.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,479   copying nnunetv2/utilities/__init__.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,480   copying nnunetv2/utilities/get_network_from_plans.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,482   copying nnunetv2/utilities/network_initialization.py -> build/lib/nnunetv2/utilities
2024-06-18T09:48:05,484   creating build/lib/nnunetv2/tests
2024-06-18T09:48:05,485   copying nnunetv2/tests/__init__.py -> build/lib/nnunetv2/tests
2024-06-18T09:48:05,488   creating build/lib/nnunetv2/evaluation
2024-06-18T09:48:05,489   copying nnunetv2/evaluation/accumulate_cv_results.py -> build/lib/nnunetv2/evaluation
2024-06-18T09:48:05,491   copying nnunetv2/evaluation/__init__.py -> build/lib/nnunetv2/evaluation
2024-06-18T09:48:05,492   copying nnunetv2/evaluation/evaluate_predictions.py -> build/lib/nnunetv2/evaluation
2024-06-18T09:48:05,495   copying nnunetv2/evaluation/find_best_configuration.py -> build/lib/nnunetv2/evaluation
2024-06-18T09:48:05,498   creating build/lib/nnunetv2/postprocessing
2024-06-18T09:48:05,499   copying nnunetv2/postprocessing/__init__.py -> build/lib/nnunetv2/postprocessing
2024-06-18T09:48:05,501   copying nnunetv2/postprocessing/remove_connected_components.py -> build/lib/nnunetv2/postprocessing
2024-06-18T09:48:05,504   creating build/lib/nnunetv2/run
2024-06-18T09:48:05,505   copying nnunetv2/run/load_pretrained_weights.py -> build/lib/nnunetv2/run
2024-06-18T09:48:05,507   copying nnunetv2/run/__init__.py -> build/lib/nnunetv2/run
2024-06-18T09:48:05,508   copying nnunetv2/run/run_training.py -> build/lib/nnunetv2/run
2024-06-18T09:48:05,511   creating build/lib/nnunetv2/training
2024-06-18T09:48:05,512   copying nnunetv2/training/__init__.py -> build/lib/nnunetv2/training
2024-06-18T09:48:05,514   creating build/lib/nnunetv2/ensembling
2024-06-18T09:48:05,514   copying nnunetv2/ensembling/__init__.py -> build/lib/nnunetv2/ensembling
2024-06-18T09:48:05,516   copying nnunetv2/ensembling/ensemble.py -> build/lib/nnunetv2/ensembling
2024-06-18T09:48:05,519   creating build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,520   copying nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,522   copying nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,524   copying nnunetv2/dataset_conversion/Dataset043_BraTS19.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,526   copying nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,528   copying nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,530   copying nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,532   copying nnunetv2/dataset_conversion/Dataset042_BraTS18.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,534   copying nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,536   copying nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,538   copying nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,540   copying nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,542   copying nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,544   copying nnunetv2/dataset_conversion/__init__.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,545   copying nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,547   copying nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,549   copying nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,551   copying nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,553   copying nnunetv2/dataset_conversion/generate_dataset_json.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,554   copying nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/lib/nnunetv2/dataset_conversion
2024-06-18T09:48:05,557   creating build/lib/nnunetv2/batch_running
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2024-06-18T09:48:05,560   copying nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/lib/nnunetv2/batch_running
2024-06-18T09:48:05,562   copying nnunetv2/batch_running/__init__.py -> build/lib/nnunetv2/batch_running
2024-06-18T09:48:05,564   copying nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/lib/nnunetv2/batch_running
2024-06-18T09:48:05,567   creating build/lib/nnunetv2/preprocessing
2024-06-18T09:48:05,568   copying nnunetv2/preprocessing/__init__.py -> build/lib/nnunetv2/preprocessing
2024-06-18T09:48:05,570   creating build/lib/nnunetv2/inference
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2024-06-18T09:48:05,573   copying nnunetv2/inference/data_iterators.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,576   copying nnunetv2/inference/__init__.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,577   copying nnunetv2/inference/predict_from_raw_data.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,581   copying nnunetv2/inference/examples.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,583   copying nnunetv2/inference/sliding_window_prediction.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,584   copying nnunetv2/inference/export_prediction.py -> build/lib/nnunetv2/inference
2024-06-18T09:48:05,587   creating build/lib/nnunetv2/imageio
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2024-06-18T09:48:05,591   copying nnunetv2/imageio/base_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,593   copying nnunetv2/imageio/tif_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,595   copying nnunetv2/imageio/natural_image_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,597   copying nnunetv2/imageio/reader_writer_registry.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,599   copying nnunetv2/imageio/__init__.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,601   copying nnunetv2/imageio/simpleitk_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-18T09:48:05,603   creating build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,604   copying nnunetv2/model_sharing/model_export.py -> build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,607   copying nnunetv2/model_sharing/model_download.py -> build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,609   copying nnunetv2/model_sharing/__init__.py -> build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,610   copying nnunetv2/model_sharing/model_import.py -> build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,612   copying nnunetv2/model_sharing/entry_points.py -> build/lib/nnunetv2/model_sharing
2024-06-18T09:48:05,614   creating build/lib/nnunetv2/experiment_planning
2024-06-18T09:48:05,615   copying nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/lib/nnunetv2/experiment_planning
2024-06-18T09:48:05,618   copying nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/lib/nnunetv2/experiment_planning
2024-06-18T09:48:05,621   copying nnunetv2/experiment_planning/__init__.py -> build/lib/nnunetv2/experiment_planning
2024-06-18T09:48:05,622   copying nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/lib/nnunetv2/experiment_planning
2024-06-18T09:48:05,625   creating build/lib/nnunetv2/utilities/label_handling
2024-06-18T09:48:05,626   copying nnunetv2/utilities/label_handling/label_handling.py -> build/lib/nnunetv2/utilities/label_handling
2024-06-18T09:48:05,628   copying nnunetv2/utilities/label_handling/__init__.py -> build/lib/nnunetv2/utilities/label_handling
2024-06-18T09:48:05,630   creating build/lib/nnunetv2/utilities/plans_handling
2024-06-18T09:48:05,631   copying nnunetv2/utilities/plans_handling/plans_handler.py -> build/lib/nnunetv2/utilities/plans_handling
2024-06-18T09:48:05,634   copying nnunetv2/utilities/plans_handling/__init__.py -> build/lib/nnunetv2/utilities/plans_handling
2024-06-18T09:48:05,637   creating build/lib/nnunetv2/tests/integration_tests
2024-06-18T09:48:05,638   copying nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-18T09:48:05,640   copying nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-18T09:48:05,642   copying nnunetv2/tests/integration_tests/__init__.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-18T09:48:05,643   copying nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-18T09:48:05,646   creating build/lib/nnunetv2/training/logging
2024-06-18T09:48:05,647   copying nnunetv2/training/logging/__init__.py -> build/lib/nnunetv2/training/logging
2024-06-18T09:48:05,648   copying nnunetv2/training/logging/nnunet_logger.py -> build/lib/nnunetv2/training/logging
2024-06-18T09:48:05,651   creating build/lib/nnunetv2/training/lr_scheduler
2024-06-18T09:48:05,652   copying nnunetv2/training/lr_scheduler/polylr.py -> build/lib/nnunetv2/training/lr_scheduler
2024-06-18T09:48:05,654   copying nnunetv2/training/lr_scheduler/__init__.py -> build/lib/nnunetv2/training/lr_scheduler
2024-06-18T09:48:05,656   creating build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,657   copying nnunetv2/training/loss/dice.py -> build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,659   copying nnunetv2/training/loss/robust_ce_loss.py -> build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,661   copying nnunetv2/training/loss/compound_losses.py -> build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,663   copying nnunetv2/training/loss/__init__.py -> build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,664   copying nnunetv2/training/loss/deep_supervision.py -> build/lib/nnunetv2/training/loss
2024-06-18T09:48:05,667   creating build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,668   copying nnunetv2/training/dataloading/utils.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,670   copying nnunetv2/training/dataloading/base_data_loader.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,672   copying nnunetv2/training/dataloading/data_loader_3d.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,674   copying nnunetv2/training/dataloading/data_loader_2d.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,676   copying nnunetv2/training/dataloading/__init__.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,678   copying nnunetv2/training/dataloading/nnunet_dataset.py -> build/lib/nnunetv2/training/dataloading
2024-06-18T09:48:05,680   creating build/lib/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:05,681   copying nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/lib/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:05,685   copying nnunetv2/training/nnUNetTrainer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:05,687   creating build/lib/nnunetv2/training/data_augmentation
2024-06-18T09:48:05,688   copying nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/lib/nnunetv2/training/data_augmentation
2024-06-18T09:48:05,690   copying nnunetv2/training/data_augmentation/__init__.py -> build/lib/nnunetv2/training/data_augmentation
2024-06-18T09:48:05,692   creating build/lib/nnunetv2/training/nnUNetTrainer/variants
2024-06-18T09:48:05,693   copying nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants
2024-06-18T09:48:05,695   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:05,696   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:05,698   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:05,700   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:05,702   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:05,703   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:05,706   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:05,707   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:05,709   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:05,710   copying nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:05,713   copying nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:05,714   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:05,715   copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:05,717   copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:05,719   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:05,720   copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:05,722   copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:05,724   copying nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:05,726   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:05,727   copying nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:05,729   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:05,731   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:05,733   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:05,736   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:05,737   copying nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:05,739   copying nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:05,741   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:05,742   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:05,744   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:05,746   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:05,748   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,749   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,751   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,753   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,756   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,757   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:05,761   creating build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,762   copying nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,763   copying nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,765   copying nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,767   copying nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,769   copying nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,771   copying nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:05,773   creating build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,774   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,776   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,778   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,779   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,781   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:05,783   creating build/lib/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:05,784   copying nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:05,786   copying nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:05,788   copying nnunetv2/batch_running/benchmarking/__init__.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:05,790   creating build/lib/nnunetv2/batch_running/release_trainings
2024-06-18T09:48:05,791   copying nnunetv2/batch_running/release_trainings/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings
2024-06-18T09:48:05,793   creating build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:05,794   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:05,796   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:05,798   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:05,800   creating build/lib/nnunetv2/preprocessing/normalization
2024-06-18T09:48:05,801   copying nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-18T09:48:05,803   copying nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-18T09:48:05,805   copying nnunetv2/preprocessing/normalization/__init__.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-18T09:48:05,807   creating build/lib/nnunetv2/preprocessing/cropping
2024-06-18T09:48:05,808   copying nnunetv2/preprocessing/cropping/cropping.py -> build/lib/nnunetv2/preprocessing/cropping
2024-06-18T09:48:05,810   copying nnunetv2/preprocessing/cropping/__init__.py -> build/lib/nnunetv2/preprocessing/cropping
2024-06-18T09:48:05,812   creating build/lib/nnunetv2/preprocessing/resampling
2024-06-18T09:48:05,813   copying nnunetv2/preprocessing/resampling/utils.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-18T09:48:05,815   copying nnunetv2/preprocessing/resampling/__init__.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-18T09:48:05,816   copying nnunetv2/preprocessing/resampling/default_resampling.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-18T09:48:05,818   copying nnunetv2/preprocessing/resampling/resample_torch.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-18T09:48:05,821   creating build/lib/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:05,822   copying nnunetv2/preprocessing/preprocessors/__init__.py -> build/lib/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:05,823   copying nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/lib/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:05,826   creating build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:05,827   copying nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:05,830   copying nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:05,831   creating build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:05,832   copying nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:05,835   copying nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:05,837   copying nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:05,838   copying nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:05,842   creating build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:05,843   copying nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:05,846   copying nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:05,848   creating build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:05,849   copying nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:05,850   copying nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:05,853   creating build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:05,854   copying nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:05,856   copying nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:05,859   running egg_info
2024-06-18T09:48:05,862   writing nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-18T09:48:05,867   writing dependency_links to nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-18T09:48:05,870   writing entry points to nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-18T09:48:05,872   writing requirements to nnunetv2_bm_custom.egg-info/requires.txt
2024-06-18T09:48:05,873   writing top-level names to nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-18T09:48:05,918   reading manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:48:05,923   adding license file 'LICENSE'
2024-06-18T09:48:05,933   writing manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-18T09:48:05,988   installing to build/bdist.linux-armv7l/wheel
2024-06-18T09:48:05,989   running install
2024-06-18T09:48:06,014   running install_lib
2024-06-18T09:48:06,018   creating build/bdist.linux-armv7l
2024-06-18T09:48:06,019   creating build/bdist.linux-armv7l/wheel
2024-06-18T09:48:06,020   creating build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-18T09:48:06,022   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,023   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-18T09:48:06,024   copying build/lib/nnunetv2/utilities/label_handling/label_handling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-18T09:48:06,027   copying build/lib/nnunetv2/utilities/label_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-18T09:48:06,029   copying build/lib/nnunetv2/utilities/helpers.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,031   copying build/lib/nnunetv2/utilities/overlay_plots.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,033   copying build/lib/nnunetv2/utilities/file_path_utilities.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,035   copying build/lib/nnunetv2/utilities/dataset_name_id_conversion.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,037   copying build/lib/nnunetv2/utilities/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,039   copying build/lib/nnunetv2/utilities/ddp_allgather.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,040   copying build/lib/nnunetv2/utilities/default_n_proc_DA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,042   copying build/lib/nnunetv2/utilities/json_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,045   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-18T09:48:06,046   copying build/lib/nnunetv2/utilities/plans_handling/plans_handler.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-18T09:48:06,049   copying build/lib/nnunetv2/utilities/plans_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-18T09:48:06,050   copying build/lib/nnunetv2/utilities/find_class_by_name.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,052   copying build/lib/nnunetv2/utilities/crossval_split.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,054   copying build/lib/nnunetv2/utilities/collate_outputs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,056   copying build/lib/nnunetv2/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,058   copying build/lib/nnunetv2/utilities/get_network_from_plans.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,060   copying build/lib/nnunetv2/utilities/network_initialization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-18T09:48:06,063   creating build/bdist.linux-armv7l/wheel/nnunetv2/tests
2024-06-18T09:48:06,064   creating build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-18T09:48:06,065   copying build/lib/nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-18T09:48:06,067   copying build/lib/nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-18T09:48:06,069   copying build/lib/nnunetv2/tests/integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-18T09:48:06,071   copying build/lib/nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-18T09:48:06,073   copying build/lib/nnunetv2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests
2024-06-18T09:48:06,074   copying build/lib/nnunetv2/configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-18T09:48:06,076   creating build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-18T09:48:06,077   copying build/lib/nnunetv2/evaluation/accumulate_cv_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-18T09:48:06,079   copying build/lib/nnunetv2/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-18T09:48:06,081   copying build/lib/nnunetv2/evaluation/evaluate_predictions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-18T09:48:06,083   copying build/lib/nnunetv2/evaluation/find_best_configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-18T09:48:06,086   creating build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-18T09:48:06,087   copying build/lib/nnunetv2/postprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-18T09:48:06,089   copying build/lib/nnunetv2/postprocessing/remove_connected_components.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-18T09:48:06,092   creating build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-18T09:48:06,093   copying build/lib/nnunetv2/run/load_pretrained_weights.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-18T09:48:06,095   copying build/lib/nnunetv2/run/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-18T09:48:06,097   copying build/lib/nnunetv2/run/run_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-18T09:48:06,099   copying build/lib/nnunetv2/paths.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-18T09:48:06,102   creating build/bdist.linux-armv7l/wheel/nnunetv2/training
2024-06-18T09:48:06,103   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-18T09:48:06,104   copying build/lib/nnunetv2/training/logging/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-18T09:48:06,106   copying build/lib/nnunetv2/training/logging/nnunet_logger.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-18T09:48:06,108   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-18T09:48:06,110   copying build/lib/nnunetv2/training/lr_scheduler/polylr.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-18T09:48:06,112   copying build/lib/nnunetv2/training/lr_scheduler/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-18T09:48:06,114   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,115   copying build/lib/nnunetv2/training/loss/dice.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,117   copying build/lib/nnunetv2/training/loss/robust_ce_loss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,119   copying build/lib/nnunetv2/training/loss/compound_losses.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,122   copying build/lib/nnunetv2/training/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,123   copying build/lib/nnunetv2/training/loss/deep_supervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-18T09:48:06,125   copying build/lib/nnunetv2/training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training
2024-06-18T09:48:06,127   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,128   copying build/lib/nnunetv2/training/dataloading/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,130   copying build/lib/nnunetv2/training/dataloading/base_data_loader.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,132   copying build/lib/nnunetv2/training/dataloading/data_loader_3d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,134   copying build/lib/nnunetv2/training/dataloading/data_loader_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,137   copying build/lib/nnunetv2/training/dataloading/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,138   copying build/lib/nnunetv2/training/dataloading/nnunet_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-18T09:48:06,141   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:06,142   copying build/lib/nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:06,147   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants
2024-06-18T09:48:06,148   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:06,149   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:06,151   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:06,153   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-18T09:48:06,155   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:06,156   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:06,158   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:06,160   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-18T09:48:06,162   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:06,163   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:06,166   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-18T09:48:06,168   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:06,169   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:06,170   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-18T09:48:06,172   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:06,173   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:06,176   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:06,178   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-18T09:48:06,180   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:06,181   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:06,183   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:06,184   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:06,187   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-18T09:48:06,189   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants
2024-06-18T09:48:06,191   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:06,192   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:06,195   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-18T09:48:06,197   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:06,198   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:06,200   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:06,201   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-18T09:48:06,204   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,205   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,207   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,209   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,212   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,213   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-18T09:48:06,216   copying build/lib/nnunetv2/training/nnUNetTrainer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-18T09:48:06,218   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-18T09:48:06,220   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,221   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,223   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,225   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,227   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,229   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,231   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-18T09:48:06,232   copying build/lib/nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-18T09:48:06,234   copying build/lib/nnunetv2/training/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-18T09:48:06,237   creating build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-18T09:48:06,237   copying build/lib/nnunetv2/ensembling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-18T09:48:06,239   copying build/lib/nnunetv2/ensembling/ensemble.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-18T09:48:06,242   creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,243   copying build/lib/nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,245   copying build/lib/nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,247   copying build/lib/nnunetv2/dataset_conversion/Dataset043_BraTS19.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,250   creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,251   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,253   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,255   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,257   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,259   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-18T09:48:06,261   copying build/lib/nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,263   copying build/lib/nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,265   copying build/lib/nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,267   copying build/lib/nnunetv2/dataset_conversion/Dataset042_BraTS18.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,269   copying build/lib/nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,271   copying build/lib/nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,273   copying build/lib/nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,275   copying build/lib/nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,277   copying build/lib/nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,279   copying build/lib/nnunetv2/dataset_conversion/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,281   copying build/lib/nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,283   copying build/lib/nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,284   copying build/lib/nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,287   copying build/lib/nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,289   copying build/lib/nnunetv2/dataset_conversion/generate_dataset_json.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,291   copying build/lib/nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-18T09:48:06,293   copying build/lib/nnunetv2/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-18T09:48:06,295   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-18T09:48:06,296   copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-18T09:48:06,299   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:06,300   copying build/lib/nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:06,302   copying build/lib/nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:06,304   copying build/lib/nnunetv2/batch_running/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-18T09:48:06,306   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings
2024-06-18T09:48:06,307   copying build/lib/nnunetv2/batch_running/release_trainings/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings
2024-06-18T09:48:06,309   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:06,310   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:06,312   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:06,314   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-18T09:48:06,316   copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-18T09:48:06,318   copying build/lib/nnunetv2/batch_running/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-18T09:48:06,319   copying build/lib/nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-18T09:48:06,322   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing
2024-06-18T09:48:06,323   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-18T09:48:06,324   copying build/lib/nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-18T09:48:06,326   copying build/lib/nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-18T09:48:06,329   copying build/lib/nnunetv2/preprocessing/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-18T09:48:06,330   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-18T09:48:06,332   copying build/lib/nnunetv2/preprocessing/cropping/cropping.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-18T09:48:06,334   copying build/lib/nnunetv2/preprocessing/cropping/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-18T09:48:06,335   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-18T09:48:06,336   copying build/lib/nnunetv2/preprocessing/resampling/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-18T09:48:06,338   copying build/lib/nnunetv2/preprocessing/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-18T09:48:06,340   copying build/lib/nnunetv2/preprocessing/resampling/default_resampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-18T09:48:06,343   copying build/lib/nnunetv2/preprocessing/resampling/resample_torch.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-18T09:48:06,345   copying build/lib/nnunetv2/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing
2024-06-18T09:48:06,347   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:06,348   copying build/lib/nnunetv2/preprocessing/preprocessors/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:06,350   copying build/lib/nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-18T09:48:06,353   creating build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,354   copying build/lib/nnunetv2/inference/JHU_inference.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,356   copying build/lib/nnunetv2/inference/data_iterators.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,359   copying build/lib/nnunetv2/inference/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,360   copying build/lib/nnunetv2/inference/predict_from_raw_data.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,363   copying build/lib/nnunetv2/inference/examples.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,366   copying build/lib/nnunetv2/inference/sliding_window_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,367   copying build/lib/nnunetv2/inference/export_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-18T09:48:06,370   creating build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,371   copying build/lib/nnunetv2/imageio/nibabel_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,374   copying build/lib/nnunetv2/imageio/base_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,376   copying build/lib/nnunetv2/imageio/tif_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,378   copying build/lib/nnunetv2/imageio/natural_image_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,380   copying build/lib/nnunetv2/imageio/reader_writer_registry.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,381   copying build/lib/nnunetv2/imageio/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,383   copying build/lib/nnunetv2/imageio/simpleitk_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-18T09:48:06,386   creating build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,386   copying build/lib/nnunetv2/model_sharing/model_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,389   copying build/lib/nnunetv2/model_sharing/model_download.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,391   copying build/lib/nnunetv2/model_sharing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,392   copying build/lib/nnunetv2/model_sharing/model_import.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,394   copying build/lib/nnunetv2/model_sharing/entry_points.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-18T09:48:06,397   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-18T09:48:06,398   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:06,399   copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:06,402   copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-18T09:48:06,403   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:06,405   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:06,408   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:06,409   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:06,411   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-18T09:48:06,413   copying build/lib/nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:06,415   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:06,416   copying build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:06,418   copying build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-18T09:48:06,420   copying build/lib/nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:06,422   copying build/lib/nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-18T09:48:06,425   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:06,426   copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:06,428   copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-18T09:48:06,430   copying build/lib/nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-18T09:48:06,432   copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-18T09:48:06,434   copying build/lib/nnunetv2/experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-18T09:48:06,436   copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-18T09:48:06,438   creating build/bdist.linux-armv7l/wheel/documentation
2024-06-18T09:48:06,439   copying build/lib/documentation/__init__.py -> build/bdist.linux-armv7l/wheel/documentation
2024-06-18T09:48:06,440   running install_egg_info
2024-06-18T09:48:06,444   Copying nnunetv2_bm_custom.egg-info to build/bdist.linux-armv7l/wheel/nnunetv2_bm_custom-2.5.1-py3.11.egg-info
2024-06-18T09:48:06,457   running install_scripts
2024-06-18T09:48:06,480   creating build/bdist.linux-armv7l/wheel/nnunetv2_bm_custom-2.5.1.dist-info/WHEEL
2024-06-18T09:48:06,483   creating '/tmp/pip-wheel-8wn1dqqm/.tmp-05soobl9/nnunetv2_bm_custom-2.5.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-18T09:48:06,486   adding 'documentation/__init__.py'
2024-06-18T09:48:06,488   adding 'nnunetv2/__init__.py'
2024-06-18T09:48:06,489   adding 'nnunetv2/configuration.py'
2024-06-18T09:48:06,491   adding 'nnunetv2/paths.py'
2024-06-18T09:48:06,492   adding 'nnunetv2/batch_running/__init__.py'
2024-06-18T09:48:06,494   adding 'nnunetv2/batch_running/collect_results_custom_Decathlon.py'
2024-06-18T09:48:06,495   adding 'nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py'
2024-06-18T09:48:06,497   adding 'nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py'
2024-06-18T09:48:06,499   adding 'nnunetv2/batch_running/benchmarking/__init__.py'
2024-06-18T09:48:06,500   adding 'nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py'
2024-06-18T09:48:06,501   adding 'nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py'
2024-06-18T09:48:06,503   adding 'nnunetv2/batch_running/release_trainings/__init__.py'
2024-06-18T09:48:06,505   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py'
2024-06-18T09:48:06,506   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py'
2024-06-18T09:48:06,507   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py'
2024-06-18T09:48:06,509   adding 'nnunetv2/dataset_conversion/Dataset027_ACDC.py'
2024-06-18T09:48:06,511   adding 'nnunetv2/dataset_conversion/Dataset042_BraTS18.py'
2024-06-18T09:48:06,512   adding 'nnunetv2/dataset_conversion/Dataset043_BraTS19.py'
2024-06-18T09:48:06,514   adding 'nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py'
2024-06-18T09:48:06,515   adding 'nnunetv2/dataset_conversion/Dataset114_MNMs.py'
2024-06-18T09:48:06,517   adding 'nnunetv2/dataset_conversion/Dataset115_EMIDEC.py'
2024-06-18T09:48:06,518   adding 'nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py'
2024-06-18T09:48:06,519   adding 'nnunetv2/dataset_conversion/Dataset137_BraTS21.py'
2024-06-18T09:48:06,521   adding 'nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py'
2024-06-18T09:48:06,522   adding 'nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py'
2024-06-18T09:48:06,524   adding 'nnunetv2/dataset_conversion/Dataset220_KiTS2023.py'
2024-06-18T09:48:06,525   adding 'nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py'
2024-06-18T09:48:06,526   adding 'nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py'
2024-06-18T09:48:06,528   adding 'nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py'
2024-06-18T09:48:06,529   adding 'nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py'
2024-06-18T09:48:06,530   adding 'nnunetv2/dataset_conversion/__init__.py'
2024-06-18T09:48:06,532   adding 'nnunetv2/dataset_conversion/convert_MSD_dataset.py'
2024-06-18T09:48:06,533   adding 'nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py'
2024-06-18T09:48:06,534   adding 'nnunetv2/dataset_conversion/generate_dataset_json.py'
2024-06-18T09:48:06,536   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py'
2024-06-18T09:48:06,538   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py'
2024-06-18T09:48:06,539   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py'
2024-06-18T09:48:06,540   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py'
2024-06-18T09:48:06,542   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py'
2024-06-18T09:48:06,544   adding 'nnunetv2/ensembling/__init__.py'
2024-06-18T09:48:06,547   adding 'nnunetv2/ensembling/ensemble.py'
2024-06-18T09:48:06,550   adding 'nnunetv2/evaluation/__init__.py'
2024-06-18T09:48:06,552   adding 'nnunetv2/evaluation/accumulate_cv_results.py'
2024-06-18T09:48:06,554   adding 'nnunetv2/evaluation/evaluate_predictions.py'
2024-06-18T09:48:06,558   adding 'nnunetv2/evaluation/find_best_configuration.py'
2024-06-18T09:48:06,561   adding 'nnunetv2/experiment_planning/__init__.py'
2024-06-18T09:48:06,564   adding 'nnunetv2/experiment_planning/plan_and_preprocess_api.py'
2024-06-18T09:48:06,567   adding 'nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py'
2024-06-18T09:48:06,571   adding 'nnunetv2/experiment_planning/verify_dataset_integrity.py'
2024-06-18T09:48:06,573   adding 'nnunetv2/experiment_planning/dataset_fingerprint/__init__.py'
2024-06-18T09:48:06,575   adding 'nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py'
2024-06-18T09:48:06,577   adding 'nnunetv2/experiment_planning/experiment_planners/__init__.py'
2024-06-18T09:48:06,581   adding 'nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py'
2024-06-18T09:48:06,582   adding 'nnunetv2/experiment_planning/experiment_planners/network_topology.py'
2024-06-18T09:48:06,585   adding 'nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py'
2024-06-18T09:48:06,586   adding 'nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py'
2024-06-18T09:48:06,588   adding 'nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py'
2024-06-18T09:48:06,589   adding 'nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py'
2024-06-18T09:48:06,591   adding 'nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py'
2024-06-18T09:48:06,593   adding 'nnunetv2/experiment_planning/plans_for_pretraining/__init__.py'
2024-06-18T09:48:06,595   adding 'nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py'
2024-06-18T09:48:06,596   adding 'nnunetv2/imageio/__init__.py'
2024-06-18T09:48:06,598   adding 'nnunetv2/imageio/base_reader_writer.py'
2024-06-18T09:48:06,599   adding 'nnunetv2/imageio/natural_image_reader_writer.py'
2024-06-18T09:48:06,601   adding 'nnunetv2/imageio/nibabel_reader_writer.py'
2024-06-18T09:48:06,603   adding 'nnunetv2/imageio/reader_writer_registry.py'
2024-06-18T09:48:06,605   adding 'nnunetv2/imageio/simpleitk_reader_writer.py'
2024-06-18T09:48:06,608   adding 'nnunetv2/imageio/tif_reader_writer.py'
2024-06-18T09:48:06,612   adding 'nnunetv2/inference/JHU_inference.py'
2024-06-18T09:48:06,614   adding 'nnunetv2/inference/__init__.py'
2024-06-18T09:48:06,617   adding 'nnunetv2/inference/data_iterators.py'
2024-06-18T09:48:06,619   adding 'nnunetv2/inference/examples.py'
2024-06-18T09:48:06,622   adding 'nnunetv2/inference/export_prediction.py'
2024-06-18T09:48:06,627   adding 'nnunetv2/inference/predict_from_raw_data.py'
2024-06-18T09:48:06,629   adding 'nnunetv2/inference/sliding_window_prediction.py'
2024-06-18T09:48:06,631   adding 'nnunetv2/model_sharing/__init__.py'
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2024-06-18T09:48:06,634   adding 'nnunetv2/model_sharing/model_download.py'
2024-06-18T09:48:06,636   adding 'nnunetv2/model_sharing/model_export.py'
2024-06-18T09:48:06,637   adding 'nnunetv2/model_sharing/model_import.py'
2024-06-18T09:48:06,639   adding 'nnunetv2/postprocessing/__init__.py'
2024-06-18T09:48:06,642   adding 'nnunetv2/postprocessing/remove_connected_components.py'
2024-06-18T09:48:06,645   adding 'nnunetv2/preprocessing/__init__.py'
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2024-06-18T09:48:06,649   adding 'nnunetv2/preprocessing/cropping/cropping.py'
2024-06-18T09:48:06,651   adding 'nnunetv2/preprocessing/normalization/__init__.py'
2024-06-18T09:48:06,653   adding 'nnunetv2/preprocessing/normalization/default_normalization_schemes.py'
2024-06-18T09:48:06,654   adding 'nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py'
2024-06-18T09:48:06,657   adding 'nnunetv2/preprocessing/preprocessors/__init__.py'
2024-06-18T09:48:06,660   adding 'nnunetv2/preprocessing/preprocessors/default_preprocessor.py'
2024-06-18T09:48:06,663   adding 'nnunetv2/preprocessing/resampling/__init__.py'
2024-06-18T09:48:06,666   adding 'nnunetv2/preprocessing/resampling/default_resampling.py'
2024-06-18T09:48:06,669   adding 'nnunetv2/preprocessing/resampling/resample_torch.py'
2024-06-18T09:48:06,671   adding 'nnunetv2/preprocessing/resampling/utils.py'
2024-06-18T09:48:06,673   adding 'nnunetv2/run/__init__.py'
2024-06-18T09:48:06,675   adding 'nnunetv2/run/load_pretrained_weights.py'
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2024-06-18T09:48:06,679   adding 'nnunetv2/tests/__init__.py'
2024-06-18T09:48:06,681   adding 'nnunetv2/tests/integration_tests/__init__.py'
2024-06-18T09:48:06,682   adding 'nnunetv2/tests/integration_tests/add_lowres_and_cascade.py'
2024-06-18T09:48:06,684   adding 'nnunetv2/tests/integration_tests/cleanup_integration_test.py'
2024-06-18T09:48:06,686   adding 'nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py'
2024-06-18T09:48:06,689   adding 'nnunetv2/training/__init__.py'
2024-06-18T09:48:06,690   adding 'nnunetv2/training/data_augmentation/__init__.py'
2024-06-18T09:48:06,691   adding 'nnunetv2/training/data_augmentation/compute_initial_patch_size.py'
2024-06-18T09:48:06,693   adding 'nnunetv2/training/data_augmentation/custom_transforms/__init__.py'
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2024-06-18T09:48:06,696   adding 'nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py'
2024-06-18T09:48:06,697   adding 'nnunetv2/training/data_augmentation/custom_transforms/masking.py'
2024-06-18T09:48:06,698   adding 'nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py'
2024-06-18T09:48:06,700   adding 'nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py'
2024-06-18T09:48:06,701   adding 'nnunetv2/training/dataloading/__init__.py'
2024-06-18T09:48:06,703   adding 'nnunetv2/training/dataloading/base_data_loader.py'
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2024-06-18T09:48:06,706   adding 'nnunetv2/training/dataloading/data_loader_3d.py'
2024-06-18T09:48:06,708   adding 'nnunetv2/training/dataloading/nnunet_dataset.py'
2024-06-18T09:48:06,709   adding 'nnunetv2/training/dataloading/utils.py'
2024-06-18T09:48:06,711   adding 'nnunetv2/training/logging/__init__.py'
2024-06-18T09:48:06,712   adding 'nnunetv2/training/logging/nnunet_logger.py'
2024-06-18T09:48:06,714   adding 'nnunetv2/training/loss/__init__.py'
2024-06-18T09:48:06,716   adding 'nnunetv2/training/loss/compound_losses.py'
2024-06-18T09:48:06,718   adding 'nnunetv2/training/loss/deep_supervision.py'
2024-06-18T09:48:06,720   adding 'nnunetv2/training/loss/dice.py'
2024-06-18T09:48:06,721   adding 'nnunetv2/training/loss/robust_ce_loss.py'
2024-06-18T09:48:06,723   adding 'nnunetv2/training/lr_scheduler/__init__.py'
2024-06-18T09:48:06,724   adding 'nnunetv2/training/lr_scheduler/polylr.py'
2024-06-18T09:48:06,725   adding 'nnunetv2/training/nnUNetTrainer/__init__.py'
2024-06-18T09:48:06,734   adding 'nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py'
2024-06-18T09:48:06,736   adding 'nnunetv2/training/nnUNetTrainer/variants/__init__.py'
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2024-06-18T09:48:06,739   adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py'
2024-06-18T09:48:06,741   adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py'
2024-06-18T09:48:06,742   adding 'nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py'
2024-06-18T09:48:06,744   adding 'nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py'
2024-06-18T09:48:06,745   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py'
2024-06-18T09:48:06,748   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py'
2024-06-18T09:48:06,750   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py'
2024-06-18T09:48:06,752   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py'
2024-06-18T09:48:06,753   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py'
2024-06-18T09:48:06,755   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py'
2024-06-18T09:48:06,756   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py'
2024-06-18T09:48:06,758   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py'
2024-06-18T09:48:06,759   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py'
2024-06-18T09:48:06,761   adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py'
2024-06-18T09:48:06,762   adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py'
2024-06-18T09:48:06,764   adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py'
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2024-06-18T09:48:06,767   adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py'
2024-06-18T09:48:06,769   adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py'
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2024-06-18T09:48:06,774   adding 'nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py'
2024-06-18T09:48:06,776   adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py'
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2024-06-18T09:48:06,778   adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py'
2024-06-18T09:48:06,780   adding 'nnunetv2/utilities/__init__.py'
2024-06-18T09:48:06,781   adding 'nnunetv2/utilities/collate_outputs.py'
2024-06-18T09:48:06,782   adding 'nnunetv2/utilities/crossval_split.py'
2024-06-18T09:48:06,784   adding 'nnunetv2/utilities/dataset_name_id_conversion.py'
2024-06-18T09:48:06,785   adding 'nnunetv2/utilities/ddp_allgather.py'
2024-06-18T09:48:06,786   adding 'nnunetv2/utilities/default_n_proc_DA.py'
2024-06-18T09:48:06,788   adding 'nnunetv2/utilities/file_path_utilities.py'
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2024-06-18T09:48:06,808   adding 'nnunetv2_bm_custom-2.5.1.dist-info/LICENSE'
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2024-06-18T09:48:06,827   removing build/bdist.linux-armv7l/wheel
2024-06-18T09:48:07,014   Building wheel for nnunetv2-bm-custom (pyproject.toml): finished with status 'done'
2024-06-18T09:48:07,026   Created wheel for nnunetv2-bm-custom: filename=nnunetv2_bm_custom-2.5.1-py3-none-any.whl size=261159 sha256=4ae7910020005aaef19a5125a68e44e1ee4ad857d77191b62c28327582f36ab4
2024-06-18T09:48:07,027   Stored in directory: /tmp/pip-ephem-wheel-cache-5i1cprdh/wheels/cf/64/24/7fc29959d17070a19f5fe812ab35eeead57ff0c7daff59a145
2024-06-18T09:48:07,051 Successfully built nnunetv2-bm-custom
2024-06-18T09:48:07,063 Removed build tracker: '/tmp/pip-build-tracker-_2lc2r_7'