2024-06-18T18:20:09,073 Created temporary directory: /tmp/pip-build-tracker-772hsuz4
2024-06-18T18:20:09,074 Initialized build tracking at /tmp/pip-build-tracker-772hsuz4
2024-06-18T18:20:09,075 Created build tracker: /tmp/pip-build-tracker-772hsuz4
2024-06-18T18:20:09,075 Entered build tracker: /tmp/pip-build-tracker-772hsuz4
2024-06-18T18:20:09,075 Created temporary directory: /tmp/pip-wheel-yoy5_kj6
2024-06-18T18:20:09,080 Created temporary directory: /tmp/pip-ephem-wheel-cache-ynmfinyf
2024-06-18T18:20:09,104 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-18T18:20:09,107 2 location(s) to search for versions of scikit-bio:
2024-06-18T18:20:09,107 * https://pypi.org/simple/scikit-bio/
2024-06-18T18:20:09,107 * https://www.piwheels.org/simple/scikit-bio/
2024-06-18T18:20:09,108 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/
2024-06-18T18:20:09,109 Getting page https://pypi.org/simple/scikit-bio/
2024-06-18T18:20:09,110 Found index url https://pypi.org/simple/
2024-06-18T18:20:09,162 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json
2024-06-18T18:20:09,167   Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0
2024-06-18T18:20:09,168   Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1
2024-06-18T18:20:09,168   Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2
2024-06-18T18:20:09,168   Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3
2024-06-18T18:20:09,169   Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4
2024-06-18T18:20:09,169   Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5
2024-06-18T18:20:09,169   Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0
2024-06-18T18:20:09,170   Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1
2024-06-18T18:20:09,170   Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2
2024-06-18T18:20:09,170   Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3
2024-06-18T18:20:09,170   Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0
2024-06-18T18:20:09,171   Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1
2024-06-18T18:20:09,171   Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2
2024-06-18T18:20:09,171   Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0
2024-06-18T18:20:09,171   Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1
2024-06-18T18:20:09,172   Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2
2024-06-18T18:20:09,172   Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3
2024-06-18T18:20:09,172   Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4
2024-06-18T18:20:09,172   Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5
2024-06-18T18:20:09,173   Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6
2024-06-18T18:20:09,173   Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7
2024-06-18T18:20:09,173   Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8
2024-06-18T18:20:09,174   Found link https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.9
2024-06-18T18:20:09,174   Found link https://files.pythonhosted.org/packages/9d/77/531cf69c99cb398c5abf8545259b88ee256bfdb72e5972bcfdbcb9942751/scikit-bio-0.6.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.6.0
2024-06-18T18:20:09,174   Found link https://files.pythonhosted.org/packages/12/6b/1a01f3df88503d9a11916972f0b0c2aed13d516f159336b4bdcfcd04098a/scikit-bio-0.6.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.6.1
2024-06-18T18:20:09,175 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/
2024-06-18T18:20:09,175 Getting page https://www.piwheels.org/simple/scikit-bio/
2024-06-18T18:20:09,176 Found index url https://www.piwheels.org/simple/
2024-06-18T18:20:09,255 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html
2024-06-18T18:20:09,263   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp311-cp311-linux_armv6l.whl#sha256=7657b22d76cf0c3a508f91d921cbfc5431049f4477456d8b26c9a24a9ebb7190 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,263   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp311-cp311-linux_armv7l.whl#sha256=7657b22d76cf0c3a508f91d921cbfc5431049f4477456d8b26c9a24a9ebb7190 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,264   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=2dfb82a5726354b8f83f298206e3c08373a5c7502bcd2d68eba605d3d7a63398 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,264   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=2dfb82a5726354b8f83f298206e3c08373a5c7502bcd2d68eba605d3d7a63398 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,264   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp311-cp311-linux_armv6l.whl#sha256=3c11c6aec89d859de926ebf1b4a4fb61ce1bcab28c1762427c042704d7ae0c9e (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,264   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp311-cp311-linux_armv7l.whl#sha256=3c11c6aec89d859de926ebf1b4a4fb61ce1bcab28c1762427c042704d7ae0c9e (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,265   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp37-cp37m-linux_armv6l.whl#sha256=bfbf0fe68e25c3d128af83db7e51b2f3c100f7cdbda1669dcdf1c51c7f18cd74 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,265   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp37-cp37m-linux_armv7l.whl#sha256=bfbf0fe68e25c3d128af83db7e51b2f3c100f7cdbda1669dcdf1c51c7f18cd74 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,265   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp39-cp39-linux_armv6l.whl#sha256=da66a4671abc7db352a7ed3975d364cba1a7adc858a10c82f32d8e6e39d007bd (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,265   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp39-cp39-linux_armv7l.whl#sha256=da66a4671abc7db352a7ed3975d364cba1a7adc858a10c82f32d8e6e39d007bd (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,265   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv6l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv7l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv6l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp311-cp311-linux_armv6l.whl#sha256=0d10c6c7922db15dcc5640bac5f192fdd8606fa47facd0f34eb648f9c3e049b2 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp311-cp311-linux_armv7l.whl#sha256=0d10c6c7922db15dcc5640bac5f192fdd8606fa47facd0f34eb648f9c3e049b2 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,266   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,267   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,267   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv6l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,267   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,267   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,267   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,268   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,268   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,268   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,268   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/)
2024-06-18T18:20:09,268 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/
2024-06-18T18:20:09,269 Skipping link: not a file: https://pypi.org/simple/scikit-bio/
2024-06-18T18:20:09,288 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates
2024-06-18T18:20:09,303 Collecting scikit-bio==0.6.1
2024-06-18T18:20:09,305   Created temporary directory: /tmp/pip-unpack-kfqhbloo
2024-06-18T18:20:09,348   Downloading scikit-bio-0.6.1.tar.gz (2.7 MB)
2024-06-18T18:20:11,363   Added scikit-bio==0.6.1 from https://files.pythonhosted.org/packages/12/6b/1a01f3df88503d9a11916972f0b0c2aed13d516f159336b4bdcfcd04098a/scikit-bio-0.6.1.tar.gz to build tracker '/tmp/pip-build-tracker-772hsuz4'
2024-06-18T18:20:11,369   Created temporary directory: /tmp/pip-build-env-so7yhxx7
2024-06-18T18:20:11,379   Installing build dependencies: started
2024-06-18T18:20:11,380   Running command pip subprocess to install build dependencies
2024-06-18T18:20:12,760   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-06-18T18:20:13,304   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-18T18:20:14,912   Collecting setuptools
2024-06-18T18:20:14,931     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.0.0-py3-none-any.whl (863 kB)
2024-06-18T18:20:15,198   Collecting wheel
2024-06-18T18:20:15,220     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-06-18T18:20:16,258   Collecting numpy
2024-06-18T18:20:16,277     Using cached https://www.piwheels.org/simple/numpy/numpy-2.0.0-cp39-cp39-linux_armv7l.whl (5.8 MB)
2024-06-18T18:20:17,910   Collecting cython
2024-06-18T18:20:18,164     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp39-cp39-linux_armv7l.whl (10.7 MB)
2024-06-18T18:20:23,804   Installing collected packages: wheel, setuptools, numpy, cython
2024-06-18T18:20:24,894     Creating /tmp/pip-build-env-so7yhxx7/overlay/bin
2024-06-18T18:20:24,896     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/wheel to 755
2024-06-18T18:20:39,268     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/f2py to 755
2024-06-18T18:20:39,270     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/numpy-config to 755
2024-06-18T18:20:42,753     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/cygdb to 755
2024-06-18T18:20:42,755     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/cython to 755
2024-06-18T18:20:42,757     changing mode of /tmp/pip-build-env-so7yhxx7/overlay/bin/cythonize to 755
2024-06-18T18:20:42,785   Successfully installed cython-3.0.10 numpy-2.0.0 setuptools-70.0.0 wheel-0.43.0
2024-06-18T18:20:43,436   Installing build dependencies: finished with status 'done'
2024-06-18T18:20:43,446   Getting requirements to build wheel: started
2024-06-18T18:20:43,447   Running command Getting requirements to build wheel
2024-06-18T18:20:46,424   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/metadata/_intersection.pyx
2024-06-18T18:20:46,425     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:20:47,203   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/ordination/_cutils.pyx
2024-06-18T18:20:47,204     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:20:49,711   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/alignment/_ssw_wrapper.pyx
2024-06-18T18:20:49,711     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:20:51,945   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/diversity/_phylogenetic.pyx
2024-06-18T18:20:51,945     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:20:52,703   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/distance/_cutils.pyx
2024-06-18T18:20:52,703     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:20:54,046   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:54,047   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:54,047   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,911   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,913   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,920   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,923   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,941   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,944   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,950   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,953   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:20:56,957   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:20:56,958   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:20:56,961   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:20:56,962   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:20:56,964   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:20:56,965   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:20:56,968   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:20:56,969   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:20:56,971   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:20:56,974   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:20:57,297   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-06-18T18:20:57,297   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
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2024-06-18T18:20:57,297   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-06-18T18:20:57,297   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-06-18T18:20:57,416   running egg_info
2024-06-18T18:20:57,426   writing scikit_bio.egg-info/PKG-INFO
2024-06-18T18:20:57,430   writing dependency_links to scikit_bio.egg-info/dependency_links.txt
2024-06-18T18:20:57,432   writing requirements to scikit_bio.egg-info/requires.txt
2024-06-18T18:20:57,433   writing top-level names to scikit_bio.egg-info/top_level.txt
2024-06-18T18:20:57,592   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,593   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,593   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,593   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,593   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,594   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,594   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,594   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,594   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,594   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:20:57,600   reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:20:57,630   reading manifest template 'MANIFEST.in'
2024-06-18T18:20:57,682   no previously-included directories found matching 'doc/build'
2024-06-18T18:20:57,685   no previously-included directories found matching 'doc/source/generated'
2024-06-18T18:20:57,687   no previously-included directories found matching 'web/_build'
2024-06-18T18:20:57,693   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-06-18T18:20:57,699   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-06-18T18:20:57,705   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-06-18T18:20:57,710   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-06-18T18:20:57,715   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-06-18T18:20:57,715   adding license file 'LICENSE.txt'
2024-06-18T18:20:57,773   writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:20:58,671   Getting requirements to build wheel: finished with status 'done'
2024-06-18T18:20:58,680   Created temporary directory: /tmp/pip-modern-metadata-fou_21hn
2024-06-18T18:20:58,682   Preparing metadata (pyproject.toml): started
2024-06-18T18:20:58,683   Running command Preparing metadata (pyproject.toml)
2024-06-18T18:21:01,436   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/metadata/_intersection.pyx
2024-06-18T18:21:01,436     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:02,205   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/ordination/_cutils.pyx
2024-06-18T18:21:02,206     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:04,753   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/alignment/_ssw_wrapper.pyx
2024-06-18T18:21:04,753     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:06,896   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/diversity/_phylogenetic.pyx
2024-06-18T18:21:06,897     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:07,638   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/distance/_cutils.pyx
2024-06-18T18:21:07,639     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:08,976   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:08,976   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:08,976   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,842   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,844   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,850   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,853   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,871   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,873   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,879   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,882   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:11,885   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:21:11,886   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:21:11,889   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:21:11,889   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:21:11,892   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:21:11,892   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:21:11,894   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:21:11,895   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:21:11,897   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:21:11,899   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:21:12,209   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-06-18T18:21:12,209   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
2024-06-18T18:21:12,209   [3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
2024-06-18T18:21:12,209   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-06-18T18:21:12,209   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-06-18T18:21:12,305   running dist_info
2024-06-18T18:21:12,312   creating /tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info
2024-06-18T18:21:12,318   writing /tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/PKG-INFO
2024-06-18T18:21:12,322   writing dependency_links to /tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/dependency_links.txt
2024-06-18T18:21:12,324   writing requirements to /tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/requires.txt
2024-06-18T18:21:12,326   writing top-level names to /tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/top_level.txt
2024-06-18T18:21:12,327   writing manifest file '/tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:21:12,552   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,552   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,552   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,552   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,552   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,553   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,553   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,553   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,553   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,553   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:21:12,559   reading manifest file '/tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:21:12,561   reading manifest template 'MANIFEST.in'
2024-06-18T18:21:12,615   no previously-included directories found matching 'doc/build'
2024-06-18T18:21:12,617   no previously-included directories found matching 'doc/source/generated'
2024-06-18T18:21:12,619   no previously-included directories found matching 'web/_build'
2024-06-18T18:21:12,623   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-06-18T18:21:12,627   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-06-18T18:21:12,631   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-06-18T18:21:12,635   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-06-18T18:21:12,638   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-06-18T18:21:12,638   adding license file 'LICENSE.txt'
2024-06-18T18:21:12,682   writing manifest file '/tmp/pip-modern-metadata-fou_21hn/scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:21:12,685   creating '/tmp/pip-modern-metadata-fou_21hn/scikit_bio-0.6.1.dist-info'
2024-06-18T18:21:13,669   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-18T18:21:13,676   Source in /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1 has version 0.6.1, which satisfies requirement scikit-bio==0.6.1 from https://files.pythonhosted.org/packages/12/6b/1a01f3df88503d9a11916972f0b0c2aed13d516f159336b4bdcfcd04098a/scikit-bio-0.6.1.tar.gz
2024-06-18T18:21:13,677   Removed scikit-bio==0.6.1 from https://files.pythonhosted.org/packages/12/6b/1a01f3df88503d9a11916972f0b0c2aed13d516f159336b4bdcfcd04098a/scikit-bio-0.6.1.tar.gz from build tracker '/tmp/pip-build-tracker-772hsuz4'
2024-06-18T18:21:13,682 Created temporary directory: /tmp/pip-unpack-w0c5v8hv
2024-06-18T18:21:13,683 Created temporary directory: /tmp/pip-unpack-glr2xe64
2024-06-18T18:21:13,697 Building wheels for collected packages: scikit-bio
2024-06-18T18:21:13,702   Created temporary directory: /tmp/pip-wheel-4xto9rcc
2024-06-18T18:21:13,702   Destination directory: /tmp/pip-wheel-4xto9rcc
2024-06-18T18:21:13,704   Building wheel for scikit-bio (pyproject.toml): started
2024-06-18T18:21:13,705   Running command Building wheel for scikit-bio (pyproject.toml)
2024-06-18T18:21:16,418   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/metadata/_intersection.pyx
2024-06-18T18:21:16,418     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:17,192   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/ordination/_cutils.pyx
2024-06-18T18:21:17,192     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:19,703   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/alignment/_ssw_wrapper.pyx
2024-06-18T18:21:19,703     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:21,882   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/diversity/_phylogenetic.pyx
2024-06-18T18:21:21,883     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:22,623   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-yoy5_kj6/scikit-bio_e259609c9c334b73baa4cc565fc043c1/skbio/stats/distance/_cutils.pyx
2024-06-18T18:21:22,623     tree = Parsing.p_module(s, pxd, full_module_name)
2024-06-18T18:21:23,947   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:23,947   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:23,948   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,800   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,802   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,809   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,812   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,830   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,833   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,839   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,843   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-06-18T18:21:26,846   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:21:26,847   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:21:26,850   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-06-18T18:21:26,851   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-06-18T18:21:26,854   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:21:26,855   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:21:26,857   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-06-18T18:21:26,858   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-06-18T18:21:26,861   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:21:26,863   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-06-18T18:21:27,179   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-06-18T18:21:27,180   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
2024-06-18T18:21:27,180   [3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
2024-06-18T18:21:27,180   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-06-18T18:21:27,180   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-06-18T18:21:27,303   running bdist_wheel
2024-06-18T18:21:27,357   running build
2024-06-18T18:21:27,357   running build_py
2024-06-18T18:21:27,367   creating build
2024-06-18T18:21:27,368   creating build/lib.linux-armv7l-cpython-39
2024-06-18T18:21:27,369   creating build/lib.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:27,370   copying skbio/test.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:27,372   copying skbio/_base.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:27,375   copying skbio/workflow.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:27,377   copying skbio/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:27,380   creating build/lib.linux-armv7l-cpython-39/skbio/table
2024-06-18T18:21:27,381   copying skbio/table/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/table
2024-06-18T18:21:27,383   copying skbio/table/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/table
2024-06-18T18:21:27,386   creating build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-06-18T18:21:27,387   copying skbio/embedding/_embedding.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-06-18T18:21:27,391   copying skbio/embedding/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-06-18T18:21:27,393   copying skbio/embedding/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-06-18T18:21:27,396   creating build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,398   copying skbio/tree/_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,400   copying skbio/tree/_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,406   copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,408   copying skbio/tree/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,411   copying skbio/tree/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-06-18T18:21:27,414   creating build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,415   copying skbio/metadata/_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,418   copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,421   copying skbio/metadata/missing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,423   copying skbio/metadata/io.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,427   copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,430   copying skbio/metadata/base.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,432   copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,434   copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,438   copying skbio/metadata/_enan.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,440   copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:27,443   creating build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,445   copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,450   copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,453   copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,457   copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,459   copying skbio/sequence/distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,462   copying skbio/sequence/_substitution.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,465   copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,468   copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,471   copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,475   copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,478   copying skbio/sequence/_alphabet.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,481   copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-06-18T18:21:27,485   creating build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,486   copying skbio/io/_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,489   copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,491   copying skbio/io/registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,494   copying skbio/io/util.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,497   copying skbio/io/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,499   copying skbio/io/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,502   copying skbio/io/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-06-18T18:21:27,505   creating build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,506   copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,511   copying skbio/alignment/_path.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,514   copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,516   copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,519   copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,523   copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:27,526   creating build/lib.linux-armv7l-cpython-39/skbio/tests
2024-06-18T18:21:27,527   copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-06-18T18:21:27,530   copying skbio/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-06-18T18:21:27,532   copying skbio/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-06-18T18:21:27,534   creating build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:21:27,536   copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:21:27,538   copying skbio/diversity/_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:21:27,541   copying skbio/diversity/_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:21:27,544   copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:21:27,547   creating build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,548   copying skbio/stats/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,550   copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,553   copying skbio/stats/gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,556   copying skbio/stats/power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,559   copying skbio/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,561   copying skbio/stats/composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:21:27,565   creating build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,566   copying skbio/util/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,569   copying skbio/util/_plotting.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,571   copying skbio/util/_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,572   copying skbio/util/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,575   copying skbio/util/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,577   copying skbio/util/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,579   copying skbio/util/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-06-18T18:21:27,581   creating build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-06-18T18:21:27,582   copying skbio/table/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-06-18T18:21:27,584   copying skbio/table/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-06-18T18:21:27,586   creating build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-06-18T18:21:27,587   copying skbio/embedding/tests/test_embedding.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-06-18T18:21:27,589   copying skbio/embedding/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-06-18T18:21:27,591   copying skbio/embedding/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-06-18T18:21:27,594   creating build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-06-18T18:21:27,595   copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-06-18T18:21:27,598   copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-06-18T18:21:27,600   copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-06-18T18:21:27,604   copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-06-18T18:21:27,607   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,608   copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,610   copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,613   copying skbio/metadata/tests/test_metadata_column.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,616   copying skbio/metadata/tests/test_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,620   copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,622   copying skbio/metadata/tests/test_enan.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,624   copying skbio/metadata/tests/test_io.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,628   copying skbio/metadata/tests/test_missing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,630   copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-06-18T18:21:27,632   creating build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,633   copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,636   copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,639   copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,642   copying skbio/sequence/tests/test_alphabet.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,644   copying skbio/sequence/tests/test_substitution.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,646   copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,649   copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,651   copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,656   copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,658   copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,661   copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-06-18T18:21:27,665   creating build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,666   copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,671   copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,676   copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,683   copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,691   copying skbio/io/format/embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,736   copying skbio/io/format/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,739   copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,741   copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,743   copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,746   copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,748   copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,751   copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,753   copying skbio/io/format/taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,757   copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,760   copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,764   copying skbio/io/format/biom.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,767   copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,771   copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,775   copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,777   copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,781   copying skbio/io/format/sample_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,784   copying skbio/io/format/embed.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,786   copying skbio/io/format/newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,789   copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-06-18T18:21:27,792   creating build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-06-18T18:21:27,794   copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-06-18T18:21:27,800   copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-06-18T18:21:27,810   copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-06-18T18:21:27,812   copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-06-18T18:21:27,816   creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,817   copying skbio/io/format/tests/test_biom.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,819   copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,822   copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,827   copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,832   copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,835   copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,838   copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,840   copying skbio/io/format/tests/test_taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,842   copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,845   copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,846   copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,849   copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,851   copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,853   copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,855   copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,857   copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,860   copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,863   copying skbio/io/format/tests/test_sample_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,864   copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,867   copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,869   copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,872   copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,874   copying skbio/io/format/tests/test_embed.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-06-18T18:21:27,877   creating build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,878   copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,881   copying skbio/alignment/tests/test_path.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,883   copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,889   copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,891   copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-06-18T18:21:27,894   creating build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-06-18T18:21:27,895   copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-06-18T18:21:27,897   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-06-18T18:21:27,898   copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-06-18T18:21:27,901   copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-06-18T18:21:27,903   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-06-18T18:21:27,904   copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-06-18T18:21:27,906   copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-06-18T18:21:27,909   copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-06-18T18:21:27,911   copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-06-18T18:21:27,914   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,915   copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,918   copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,919   copying skbio/diversity/alpha/_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,922   copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,925   copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,927   copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,929   copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-06-18T18:21:27,932   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-06-18T18:21:27,933   copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-06-18T18:21:27,935   copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-06-18T18:21:27,938   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,938   copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,940   copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,942   copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,944   copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,946   copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,949   copying skbio/diversity/alpha/tests/test_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,951   copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-06-18T18:21:27,953   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,954   copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,957   copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,959   copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,961   copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,964   copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,966   copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,969   copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:21:27,971   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,972   copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,975   copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,978   copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,980   copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,982   copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,984   copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,987   copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,989   copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:21:27,992   creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-06-18T18:21:27,993   copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-06-18T18:21:27,995   copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-06-18T18:21:27,998   creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:27,999   copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,001   copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,003   copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,006   copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,009   copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,013   copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-06-18T18:21:28,015   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,016   copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,018   copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,021   copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,023   copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,025   copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,027   copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,030   copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-06-18T18:21:28,032   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,033   copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,036   copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,038   copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,041   copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,043   copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,046   copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,048   copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-06-18T18:21:28,051   creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-06-18T18:21:28,052   copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-06-18T18:21:28,054   copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-06-18T18:21:28,056   creating build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,057   copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,060   copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,062   copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,064   copying skbio/util/tests/test_plotting.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,066   copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-06-18T18:21:28,190   creating build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data
2024-06-18T18:21:28,191   copying skbio/embedding/tests/data/embed1.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data
2024-06-18T18:21:28,197   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data
2024-06-18T18:21:28,197   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,198   copying skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,201   copying skbio/metadata/tests/data/invalid/header-only.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,202   copying skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,204   copying skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,206   copying skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,208   copying skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,210   copying skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,212   copying skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,214   copying skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,215   copying skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,217   copying skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,219   copying skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,221   copying skbio/metadata/tests/data/invalid/empty-file -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,223   copying skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,225   copying skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,227   copying skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,229   copying skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,231   copying skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,233   copying skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,235   copying skbio/metadata/tests/data/invalid/empty-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,237   copying skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,239   copying skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,241   copying skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,243   copying skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,245   copying skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,247   copying skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,249   copying skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,251   copying skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-06-18T18:21:28,253   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,254   copying skbio/metadata/tests/data/valid/column-order.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,256   copying skbio/metadata/tests/data/valid/jagged.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,258   copying skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,259   copying skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,261   copying skbio/metadata/tests/data/valid/comments.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,263   copying skbio/metadata/tests/data/valid/qiime1.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,265   copying skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,267   copying skbio/metadata/tests/data/valid/simple.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,269   copying skbio/metadata/tests/data/valid/empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,271   copying skbio/metadata/tests/data/valid/no-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,273   copying skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,275   copying skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,277   copying skbio/metadata/tests/data/valid/missing-data.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,279   copying skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,281   copying skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,283   copying skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,285   copying skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,286   copying skbio/metadata/tests/data/valid/minimal.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,288   copying skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,290   copying skbio/metadata/tests/data/valid/BOM-simple.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,292   copying skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,294   copying skbio/metadata/tests/data/valid/override-insdc.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,296   copying skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,297   copying skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,299   copying skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,301   copying skbio/metadata/tests/data/valid/single-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,303   copying skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,305   copying skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,307   copying skbio/metadata/tests/data/valid/numeric-column.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,309   copying skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,311   copying skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,313   copying skbio/metadata/tests/data/valid/simple.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,315   copying skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,317   copying skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,319   copying skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,321   copying skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,323   copying skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,325   copying skbio/metadata/tests/data/valid/single-column.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-06-18T18:21:28,327   creating build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,328   copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,330   copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,331   copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,333   copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,335   copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,337   copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,339   copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,341   copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-06-18T18:21:28,342   creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,343   copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,345   copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,347   copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,349   copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,351   copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,353   copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,355   copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,357   copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,358   copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,360   copying skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,362   copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,364   copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,366   copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,367   copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,370   copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,371   copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,373   copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,375   copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,377   copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,380   copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,382   copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,385   copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,387   copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,389   copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,392   copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,394   copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,397   copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,400   copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,403   copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,406   copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,409   copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,411   copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,414   copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,416   copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,419   copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,421   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,424   copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,426   copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,429   copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,431   copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,434   copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,437   copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,439   copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,442   copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,445   copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,447   copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,450   copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,452   copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,454   copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,457   copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,460   copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,462   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,465   copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,467   copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,470   copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,472   copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,475   copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,478   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,480   copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,482   copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,483   copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,485   copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,487   copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,489   copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,491   copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,493   copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,495   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,497   copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,499   copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,501   copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,503   copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,505   copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,507   copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,509   copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,511   copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,513   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,515   copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,517   copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,519   copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,521   copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,523   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,525   copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,526   copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,528   copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,530   copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,532   copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,534   copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,536   copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,539   copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,541   copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,543   copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,545   copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,547   copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,549   copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,551   copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,553   copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,555   copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,557   copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,560   copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,562   copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,564   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,566   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,568   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,570   copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,571   copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,574   copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,576   copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,578   copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,580   copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,582   copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,583   copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,585   copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,587   copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,589   copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,591   copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,593   copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,595   copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,597   copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,599   copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,601   copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,603   copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,605   copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,607   copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,609   copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,611   copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,613   copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,615   copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,617   copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,619   copying skbio/io/format/tests/data/prot_vec.emb -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,621   copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,623   copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,625   copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,627   copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,629   copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,631   copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,633   copying skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,635   copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,637   copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,639   copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,641   copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,643   copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,645   copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,647   copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,649   copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,651   copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,653   copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,656   copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,658   copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,660   copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,662   copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,664   copying skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,666   copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,668   copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,670   copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,672   copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,674   copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,675   copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,677   copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,680   copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,682   copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,684   copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,686   copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,688   copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,690   copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,692   copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,694   copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,696   copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,698   copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,700   copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,702   copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,703   copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,705   copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,708   copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,710   copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,712   copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,714   copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,716   copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,718   copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,719   copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,721   copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,723   copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,726   copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,728   copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,730   copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,732   copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,734   copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,736   copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,738   copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,740   copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,742   copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,744   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,746   copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,748   copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,750   copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,752   copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,754   copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,756   copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,758   copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,760   copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,762   copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,764   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,766   copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,769   copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,770   copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,772   copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,774   copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,776   copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,778   copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,781   copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,783   copying skbio/io/format/tests/data/embed2.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,790   copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,792   copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,794   copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,796   copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,798   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,800   copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,802   copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,804   copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,806   copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,808   copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,809   copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,811   copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,813   copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,815   copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,817   copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,819   copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,825   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,827   copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,829   copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,831   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,833   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,835   copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,837   copying skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,839   copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,841   copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,843   copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,845   copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,847   copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,849   copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,851   copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,853   copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,855   copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,857   copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,858   copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,861   copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,862   copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,865   copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,867   copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,869   copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,871   copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,873   copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,875   copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,877   copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,879   copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,881   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,883   copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,885   copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,887   copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,889   copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,891   copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,893   copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,895   copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,897   copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,899   copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,901   copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,903   copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,905   copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,907   copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,910   copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,912   copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,914   copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,916   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,918   copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,921   copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,923   copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,925   copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,927   copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,929   copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,931   copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,933   copying skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,935   copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,937   copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,939   copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,942   copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,943   copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,945   copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,947   copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,949   copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,951   copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,953   copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,955   copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,957   copying skbio/io/format/tests/data/prot.emb -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,966   copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,968   copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,971   copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,974   copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,976   copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,979   copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,982   copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,984   copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,987   copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,988   copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,990   copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,993   copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,994   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:28,996   copying skbio/io/format/tests/data/embed1.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,005   copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,007   copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,009   copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,011   copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,013   copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,015   copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,017   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,019   copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,022   copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,023   copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,025   copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,027   copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,029   copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,031   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,033   copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,035   copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,037   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,039   copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,041   copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,043   copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,045   copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,047   copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,049   copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,051   copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,053   copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,055   copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,057   copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,059   copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,061   copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,063   copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,065   copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,067   copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,069   copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,071   copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,073   copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,075   copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,077   copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,079   copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,081   copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,083   copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-06-18T18:21:29,086   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data
2024-06-18T18:21:29,086   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,087   copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,090   copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,092   copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,094   copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,096   copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,098   copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:21:29,100   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data
2024-06-18T18:21:29,101   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:21:29,102   copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:21:29,104   copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:21:29,106   copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:21:29,109   copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:21:29,112   creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,113   copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,116   copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,119   copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,122   copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,125   copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,128   copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,130   copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,133   copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,135   copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,138   copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,140   copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,143   copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-06-18T18:21:29,145   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,146   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,149   copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,151   copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,153   copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,155   copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,157   copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,159   copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,161   copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,163   copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,165   copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,168   copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,170   copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,173   copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,175   copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,177   copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,179   copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,182   copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,184   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,187   copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,189   copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,192   copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,194   copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,196   copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,199   copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,202   copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,204   copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,207   copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,210   copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,213   copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,216   copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,219   copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,222   copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,225   copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,228   copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,230   copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,233   copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,235   copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,237   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,239   copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,241   copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-06-18T18:21:29,243   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,244   copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,246   copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,249   copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,252   copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,255   copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,258   copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,261   copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,263   copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,265   copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,267   copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,269   copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,272   copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,274   copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,276   copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,278   copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,280   copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,283   copying skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,285   copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,287   copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,289   copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,291   copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,294   copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,296   copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,298   copying skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,303   copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,307   copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-06-18T18:21:29,334   running build_ext
2024-06-18T18:21:29,345   building 'skbio.metadata._intersection' extension
2024-06-18T18:21:29,346   creating build/temp.linux-armv7l-cpython-39
2024-06-18T18:21:29,346   creating build/temp.linux-armv7l-cpython-39/skbio
2024-06-18T18:21:29,347   creating build/temp.linux-armv7l-cpython-39/skbio/metadata
2024-06-18T18:21:29,348   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o
2024-06-18T18:21:44,886   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so
2024-06-18T18:21:45,039   building 'skbio.alignment._ssw_wrapper' extension
2024-06-18T18:21:45,040   creating build/temp.linux-armv7l-cpython-39/skbio/alignment
2024-06-18T18:21:45,040   creating build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-06-18T18:21:45,042   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP
2024-06-18T18:21:48,161   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP
2024-06-18T18:21:48,508   In file included from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-06-18T18:21:48,508                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-06-18T18:21:48,508                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-06-18T18:21:48,508                    from skbio/alignment/_ssw_wrapper.c:1276:
2024-06-18T18:21:48,508   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-06-18T18:21:48,509      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-06-18T18:21:48,509         |  ^~~~~~~
2024-06-18T18:22:05,341   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so
2024-06-18T18:22:05,526   building 'skbio.diversity._phylogenetic' extension
2024-06-18T18:22:05,527   creating build/temp.linux-armv7l-cpython-39/skbio/diversity
2024-06-18T18:22:05,528   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o
2024-06-18T18:22:05,906   In file included from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-06-18T18:22:05,907                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-06-18T18:22:05,907                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-06-18T18:22:05,907                    from skbio/diversity/_phylogenetic.c:1249:
2024-06-18T18:22:05,907   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-06-18T18:22:05,907      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-06-18T18:22:05,907         |  ^~~~~~~
2024-06-18T18:22:13,155   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so
2024-06-18T18:22:13,284   building 'skbio.stats.ordination._cutils' extension
2024-06-18T18:22:13,285   creating build/temp.linux-armv7l-cpython-39/skbio/stats
2024-06-18T18:22:13,285   creating build/temp.linux-armv7l-cpython-39/skbio/stats/ordination
2024-06-18T18:22:13,286   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
2024-06-18T18:22:44,796   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -fopenmp
2024-06-18T18:22:45,020   building 'skbio.stats.distance._cutils' extension
2024-06-18T18:22:45,021   creating build/temp.linux-armv7l-cpython-39/skbio/stats/distance
2024-06-18T18:22:45,022   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
2024-06-18T18:22:45,374   In file included from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-06-18T18:22:45,374                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-06-18T18:22:45,374                    from /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-06-18T18:22:45,375                    from skbio/stats/distance/_cutils.c:1249:
2024-06-18T18:22:45,375   /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-06-18T18:22:45,375      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-06-18T18:22:45,375         |  ^~~~~~~
2024-06-18T18:23:31,012   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -fopenmp
2024-06-18T18:23:31,256   installing to build/bdist.linux-armv7l/wheel
2024-06-18T18:23:31,256   running install
2024-06-18T18:23:31,282   running install_lib
2024-06-18T18:23:31,291   creating build/bdist.linux-armv7l
2024-06-18T18:23:31,292   creating build/bdist.linux-armv7l/wheel
2024-06-18T18:23:31,294   creating build/bdist.linux-armv7l/wheel/skbio
2024-06-18T18:23:31,296   creating build/bdist.linux-armv7l/wheel/skbio/table
2024-06-18T18:23:31,297   copying build/lib.linux-armv7l-cpython-39/skbio/table/_base.py -> build/bdist.linux-armv7l/wheel/skbio/table
2024-06-18T18:23:31,300   creating build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-06-18T18:23:31,301   copying build/lib.linux-armv7l-cpython-39/skbio/table/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-06-18T18:23:31,303   copying build/lib.linux-armv7l-cpython-39/skbio/table/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-06-18T18:23:31,305   copying build/lib.linux-armv7l-cpython-39/skbio/table/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/table
2024-06-18T18:23:31,307   copying build/lib.linux-armv7l-cpython-39/skbio/test.py -> build/bdist.linux-armv7l/wheel/skbio
2024-06-18T18:23:31,310   creating build/bdist.linux-armv7l/wheel/skbio/embedding
2024-06-18T18:23:31,311   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/_embedding.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-06-18T18:23:31,314   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-06-18T18:23:31,317   creating build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-06-18T18:23:31,318   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/test_embedding.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-06-18T18:23:31,321   creating build/bdist.linux-armv7l/wheel/skbio/embedding/tests/data
2024-06-18T18:23:31,322   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data/embed1.txt.npy -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests/data
2024-06-18T18:23:31,329   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-06-18T18:23:31,331   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-06-18T18:23:31,333   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-06-18T18:23:31,335   copying build/lib.linux-armv7l-cpython-39/skbio/_base.py -> build/bdist.linux-armv7l/wheel/skbio
2024-06-18T18:23:31,337   creating build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,338   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,340   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,345   creating build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-06-18T18:23:31,346   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-06-18T18:23:31,348   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-06-18T18:23:31,351   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-06-18T18:23:31,354   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-06-18T18:23:31,356   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,358   copying build/lib.linux-armv7l-cpython-39/skbio/tree/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,360   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-06-18T18:23:31,362   creating build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,363   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,366   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,369   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/missing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,371   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/io.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,373   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,393   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,396   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/base.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,398   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,400   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,401   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,403   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,406   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_metadata_column.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,409   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,411   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_intersection.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,414   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_enan.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,415   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_io.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,418   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_missing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,420   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data
2024-06-18T18:23:31,422   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,423   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,425   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/header-only.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,427   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,428   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,430   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,432   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,433   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,435   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,437   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,438   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,440   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,441   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,443   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-file -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,445   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,446   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,448   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,449   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,451   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,453   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,454   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,456   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,458   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,459   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,461   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,463   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,464   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,466   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,467   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-06-18T18:23:31,470   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,471   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/column-order.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,473   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/jagged.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,474   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,476   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,478   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/comments.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,479   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiime1.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,481   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,482   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,484   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/empty-rows.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,486   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,487   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,489   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,491   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-data.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,493   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,494   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,496   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,498   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,499   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/minimal.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,501   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,503   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/BOM-simple.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,504   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,506   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/override-insdc.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,508   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,510   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,511   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,513   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/single-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,515   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,517   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,519   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/numeric-column.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,520   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,522   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,524   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,525   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,527   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,529   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,531   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,532   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,534   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/single-column.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-06-18T18:23:31,535   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-06-18T18:23:31,537   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,540   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_enan.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,542   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-06-18T18:23:31,545   creating build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,545   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,549   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,551   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,554   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_nucleotide_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,556   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,558   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_substitution.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,561   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,563   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,565   creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,566   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,568   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,571   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,573   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_alphabet.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,575   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_substitution.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,578   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,580   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,582   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,586   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,587   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,589   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-06-18T18:23:31,591   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,594   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,597   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_alphabet.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,599   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-06-18T18:23:31,602   creating build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:31,603   copying build/lib.linux-armv7l-cpython-39/skbio/io/_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:31,606   creating build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,606   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,609   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,611   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,614   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,617   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,620   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,622   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,625   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,627   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,630   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,632   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,634   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,637   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,639   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,641   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,644   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/biom.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,646   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,648   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_blast.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,650   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:31,653   creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,654   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_biom.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,656   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,658   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,661   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,663   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,665   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,668   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,670   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,672   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,674   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,676   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,678   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,680   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,682   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,684   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,687   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,690   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,692   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sample_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,694   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:31,705   creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,706   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,708   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,711   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,713   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_multi_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,715   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,718   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,720   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,722   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,725   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,727   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,729   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,731   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,734   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,736   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error4 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,739   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,741   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,743   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,745   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,747   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,750   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,752   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,755   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,757   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,759   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,761   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,764   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,767   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,769   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,772   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,774   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,776   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/empty -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,778   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/tsv_10_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,780   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,783   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,785   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,787   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,790   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,792   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,794   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,797   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,798   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,800   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_all_data_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,802   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,803   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,811   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,830   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,847   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error23 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,896   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,898   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,900   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,909   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,915   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_tab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,926   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,929   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,931   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,933   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,934   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,942   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,944   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,949   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error11 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,970   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:31,972   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_tile -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,980   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,983   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,987   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error16 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,992   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:31,995   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/whitespace_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,001   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,013   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,019   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error9 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,026   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,028   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,036   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,038   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error24 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,050   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,052   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,057   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,067   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error19 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,074   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,094   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,098   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,100   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,105   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,106   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,108   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,110   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,117   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,118   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,120   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,122   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,123   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,125   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,126   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,128   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-06-18T18:23:32,137   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,138   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,140   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,142   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,144   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,146   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,148   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,150   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,151   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,153   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,154   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,156   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error20 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,159   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,161   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,163   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,165   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,166   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_simple -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,169   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,170   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,172   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_metadata_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,174   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_tabs.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,175   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,177   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,179   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,181   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,182   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error17 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,185   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,186   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,188   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,190   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_variable_length_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,192   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,194   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,196   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,198   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,199   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,201   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,203   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,205   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,207   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,208   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error18 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,210   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gc -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,212   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,214   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,215   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,217   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error6 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,219   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,221   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,222   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,224   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_data_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,226   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,228   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_constructed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,230   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,231   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,234   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,235   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/prot.emb -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,244   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error21 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,246   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,248   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_spaces.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,250   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,252   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,254   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,256   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,258   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_nodes.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,260   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_rna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,262   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,264   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,266   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,268   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,270   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embed1.txt.npy -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,277   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,279   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_vtab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,281   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,283   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error10 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,286   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,287   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,290   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,292   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_dna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,294   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,296   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,298   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,299   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,301   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,303   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,305   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,307   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,309   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,311   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,313   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,316   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_short_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,318   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,320   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,322   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,324   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,326   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,328   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,330   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,332   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,334   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,336   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,338   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,340   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,342   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,344   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,346   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_names.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,348   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,350   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,352   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,355   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,357   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-06-18T18:23:32,359   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:32,362   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:32,366   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:32,368   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embed.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-06-18T18:23:32,370   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:32,373   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/sample_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:32,376   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embed.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:32,379   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:32,382   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-06-18T18:23:32,384   creating build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-06-18T18:23:32,386   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_registry.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-06-18T18:23:32,389   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-06-18T18:23:32,393   creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,395   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,397   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file_2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,399   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,401   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,403   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,405   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,407   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,409   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-06-18T18:23:32,411   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-06-18T18:23:32,413   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-06-18T18:23:32,416   copying build/lib.linux-armv7l-cpython-39/skbio/io/_fileobject.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,418   copying build/lib.linux-armv7l-cpython-39/skbio/io/registry.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,422   copying build/lib.linux-armv7l-cpython-39/skbio/io/util.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,425   copying build/lib.linux-armv7l-cpython-39/skbio/io/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,427   copying build/lib.linux-armv7l-cpython-39/skbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,430   copying build/lib.linux-armv7l-cpython-39/skbio/io/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-06-18T18:23:32,434   creating build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,435   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,441   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_path.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,446   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,475   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,478   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,483   creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,484   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,487   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_path.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,490   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,496   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_ssw.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,498   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-06-18T18:23:32,501   creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib
2024-06-18T18:23:32,502   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/_lib
2024-06-18T18:23:32,504   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_indexing.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,507   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-06-18T18:23:32,511   creating build/bdist.linux-armv7l/wheel/skbio/tests
2024-06-18T18:23:32,512   copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_workflow.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-06-18T18:23:32,515   copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-06-18T18:23:32,518   copying build/lib.linux-armv7l-cpython-39/skbio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-06-18T18:23:32,521   creating build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,522   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,526   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-06-18T18:23:32,528   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-06-18T18:23:32,529   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-06-18T18:23:32,535   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data
2024-06-18T18:23:32,537   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,539   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,541   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,544   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,546   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,549   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,551   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-06-18T18:23:32,553   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-06-18T18:23:32,556   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-06-18T18:23:32,560   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-06-18T18:23:32,563   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,566   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,570   creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-06-18T18:23:32,571   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-06-18T18:23:32,574   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-06-18T18:23:32,579   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-06-18T18:23:32,582   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-06-18T18:23:32,585   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,605   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-06-18T18:23:32,608   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,609   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,613   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,615   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,617   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,620   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,622   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,623   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,625   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,627   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,629   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,632   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,634   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,637   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data
2024-06-18T18:23:32,639   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:23:32,640   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:23:32,642   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:23:32,644   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:23:32,645   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-06-18T18:23:32,647   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-06-18T18:23:32,649   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,651   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-06-18T18:23:32,653   copying build/lib.linux-armv7l-cpython-39/skbio/workflow.py -> build/bdist.linux-armv7l/wheel/skbio
2024-06-18T18:23:32,656   creating build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,658   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,659   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,661   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,663   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,665   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,667   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,670   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,671   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,673   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,676   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,678   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,680   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,683   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,684   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,686   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,687   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,689   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,690   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,692   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,693   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,695   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,697   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,698   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,700   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,702   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,704   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,705   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,707   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,709   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,710   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,712   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,713   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,715   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,717   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,718   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,720   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,722   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,723   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,725   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,727   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,729   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,730   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,732   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,733   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,735   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,737   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,739   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,741   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,743   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,744   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,746   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,747   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,749   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-06-18T18:23:32,751   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,753   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-06-18T18:23:32,755   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,785   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,787   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-06-18T18:23:32,789   copying build/lib.linux-armv7l-cpython-39/skbio/stats/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,791   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,792   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,795   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,798   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,800   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,802   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,803   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,805   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,807   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,810   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,813   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,816   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,817   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,819   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,820   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,822   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,824   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,826   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,833   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,835   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,836   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,838   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,840   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,841   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,843   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,845   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,846   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,848   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,850   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,852   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,853   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,855   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,856   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,859   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,860   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,862   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,865   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,866   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-06-18T18:23:32,868   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,870   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-06-18T18:23:32,872   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,874   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,877   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,907   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,910   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-06-18T18:23:32,912   copying build/lib.linux-armv7l-cpython-39/skbio/stats/_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,915   creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-06-18T18:23:32,916   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-06-18T18:23:32,919   creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-06-18T18:23:32,920   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-06-18T18:23:32,923   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-06-18T18:23:32,925   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-06-18T18:23:32,927   copying build/lib.linux-armv7l-cpython-39/skbio/stats/gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,930   creating build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,931   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,933   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_power.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,936   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,939   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,942   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,946   creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,947   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,949   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,951   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,953   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,955   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,957   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,959   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,961   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,962   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,965   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,966   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,968   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-06-18T18:23:32,970   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-06-18T18:23:32,972   copying build/lib.linux-armv7l-cpython-39/skbio/stats/power.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,976   copying build/lib.linux-armv7l-cpython-39/skbio/stats/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,978   copying build/lib.linux-armv7l-cpython-39/skbio/stats/composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-06-18T18:23:32,981   copying build/lib.linux-armv7l-cpython-39/skbio/__init__.py -> build/bdist.linux-armv7l/wheel/skbio
2024-06-18T18:23:32,984   creating build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:32,985   copying build/lib.linux-armv7l-cpython-39/skbio/util/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:32,988   copying build/lib.linux-armv7l-cpython-39/skbio/util/_plotting.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:32,990   copying build/lib.linux-armv7l-cpython-39/skbio/util/_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:32,992   creating build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:32,993   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:32,996   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:32,998   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:33,001   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:33,003   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-06-18T18:23:33,005   copying build/lib.linux-armv7l-cpython-39/skbio/util/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:33,007   copying build/lib.linux-armv7l-cpython-39/skbio/util/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:33,009   copying build/lib.linux-armv7l-cpython-39/skbio/util/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:33,011   copying build/lib.linux-armv7l-cpython-39/skbio/util/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-06-18T18:23:33,013   running install_egg_info
2024-06-18T18:23:33,027   running egg_info
2024-06-18T18:23:33,032   writing scikit_bio.egg-info/PKG-INFO
2024-06-18T18:23:33,036   writing dependency_links to scikit_bio.egg-info/dependency_links.txt
2024-06-18T18:23:33,038   writing requirements to scikit_bio.egg-info/requires.txt
2024-06-18T18:23:33,040   writing top-level names to scikit_bio.egg-info/top_level.txt
2024-06-18T18:23:33,232   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,232   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,232   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,233   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,233   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,234   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,234   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,235   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,235   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,235   dependency /tmp/pip-build-env-so7yhxx7/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-06-18T18:23:33,242   reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:23:33,271   reading manifest template 'MANIFEST.in'
2024-06-18T18:23:33,320   no previously-included directories found matching 'doc/build'
2024-06-18T18:23:33,325   no previously-included directories found matching 'doc/source/generated'
2024-06-18T18:23:33,329   no previously-included directories found matching 'web/_build'
2024-06-18T18:23:33,338   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-06-18T18:23:33,348   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-06-18T18:23:33,357   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-06-18T18:23:33,364   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-06-18T18:23:33,372   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-06-18T18:23:33,373   adding license file 'LICENSE.txt'
2024-06-18T18:23:33,446   writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-06-18T18:23:33,449   Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.6.1-py3.9.egg-info
2024-06-18T18:23:33,460   running install_scripts
2024-06-18T18:23:33,511   creating build/bdist.linux-armv7l/wheel/scikit_bio-0.6.1.dist-info/WHEEL
2024-06-18T18:23:33,514   creating '/tmp/pip-wheel-4xto9rcc/.tmp-5y8qt59_/scikit_bio-0.6.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-18T18:23:33,518   adding 'skbio/__init__.py'
2024-06-18T18:23:33,520   adding 'skbio/_base.py'
2024-06-18T18:23:33,521   adding 'skbio/test.py'
2024-06-18T18:23:33,524   adding 'skbio/workflow.py'
2024-06-18T18:23:33,527   adding 'skbio/alignment/__init__.py'
2024-06-18T18:23:33,529   adding 'skbio/alignment/_indexing.py'
2024-06-18T18:23:33,534   adding 'skbio/alignment/_pairwise.py'
2024-06-18T18:23:33,537   adding 'skbio/alignment/_path.py'
2024-06-18T18:23:33,539   adding 'skbio/alignment/_repr.py'
2024-06-18T18:23:33,711   adding 'skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so'
2024-06-18T18:23:33,726   adding 'skbio/alignment/_tabular_msa.py'
2024-06-18T18:23:33,729   adding 'skbio/alignment/_lib/__init__.py'
2024-06-18T18:23:33,731   adding 'skbio/alignment/tests/__init__.py'
2024-06-18T18:23:33,734   adding 'skbio/alignment/tests/test_pairwise.py'
2024-06-18T18:23:33,737   adding 'skbio/alignment/tests/test_path.py'
2024-06-18T18:23:33,740   adding 'skbio/alignment/tests/test_ssw.py'
2024-06-18T18:23:33,752   adding 'skbio/alignment/tests/test_tabular_msa.py'
2024-06-18T18:23:33,756   adding 'skbio/diversity/__init__.py'
2024-06-18T18:23:33,759   adding 'skbio/diversity/_block.py'
2024-06-18T18:23:33,762   adding 'skbio/diversity/_driver.py'
2024-06-18T18:23:33,844   adding 'skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so'
2024-06-18T18:23:33,848   adding 'skbio/diversity/_util.py'
2024-06-18T18:23:33,851   adding 'skbio/diversity/alpha/__init__.py'
2024-06-18T18:23:33,852   adding 'skbio/diversity/alpha/_ace.py'
2024-06-18T18:23:33,857   adding 'skbio/diversity/alpha/_base.py'
2024-06-18T18:23:33,859   adding 'skbio/diversity/alpha/_chao1.py'
2024-06-18T18:23:33,861   adding 'skbio/diversity/alpha/_gini.py'
2024-06-18T18:23:33,864   adding 'skbio/diversity/alpha/_lladser.py'
2024-06-18T18:23:33,867   adding 'skbio/diversity/alpha/_pd.py'
2024-06-18T18:23:33,869   adding 'skbio/diversity/alpha/tests/__init__.py'
2024-06-18T18:23:33,870   adding 'skbio/diversity/alpha/tests/test_ace.py'
2024-06-18T18:23:33,873   adding 'skbio/diversity/alpha/tests/test_base.py'
2024-06-18T18:23:33,875   adding 'skbio/diversity/alpha/tests/test_chao1.py'
2024-06-18T18:23:33,876   adding 'skbio/diversity/alpha/tests/test_gini.py'
2024-06-18T18:23:33,878   adding 'skbio/diversity/alpha/tests/test_lladser.py'
2024-06-18T18:23:33,880   adding 'skbio/diversity/alpha/tests/test_pd.py'
2024-06-18T18:23:33,883   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md'
2024-06-18T18:23:33,884   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt'
2024-06-18T18:23:33,886   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv'
2024-06-18T18:23:33,887   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk'
2024-06-18T18:23:33,889   adding 'skbio/diversity/beta/__init__.py'
2024-06-18T18:23:33,892   adding 'skbio/diversity/beta/_unifrac.py'
2024-06-18T18:23:33,894   adding 'skbio/diversity/beta/tests/__init__.py'
2024-06-18T18:23:33,897   adding 'skbio/diversity/beta/tests/test_unifrac.py'
2024-06-18T18:23:33,900   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md'
2024-06-18T18:23:33,901   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv'
2024-06-18T18:23:33,903   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk'
2024-06-18T18:23:33,904   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt'
2024-06-18T18:23:33,906   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt'
2024-06-18T18:23:33,907   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt'
2024-06-18T18:23:33,909   adding 'skbio/diversity/tests/__init__.py'
2024-06-18T18:23:33,911   adding 'skbio/diversity/tests/test_block.py'
2024-06-18T18:23:33,915   adding 'skbio/diversity/tests/test_driver.py'
2024-06-18T18:23:33,917   adding 'skbio/diversity/tests/test_util.py'
2024-06-18T18:23:33,919   adding 'skbio/embedding/__init__.py'
2024-06-18T18:23:33,921   adding 'skbio/embedding/_embedding.py'
2024-06-18T18:23:33,923   adding 'skbio/embedding/_protein.py'
2024-06-18T18:23:33,925   adding 'skbio/embedding/tests/__init__.py'
2024-06-18T18:23:33,927   adding 'skbio/embedding/tests/test_embedding.py'
2024-06-18T18:23:33,929   adding 'skbio/embedding/tests/test_protein.py'
2024-06-18T18:23:33,968   adding 'skbio/embedding/tests/data/embed1.txt.npy'
2024-06-18T18:23:33,972   adding 'skbio/io/__init__.py'
2024-06-18T18:23:33,974   adding 'skbio/io/_exception.py'
2024-06-18T18:23:33,976   adding 'skbio/io/_fileobject.py'
2024-06-18T18:23:33,978   adding 'skbio/io/_iosources.py'
2024-06-18T18:23:33,979   adding 'skbio/io/_warning.py'
2024-06-18T18:23:33,985   adding 'skbio/io/registry.py'
2024-06-18T18:23:33,987   adding 'skbio/io/util.py'
2024-06-18T18:23:33,990   adding 'skbio/io/format/__init__.py'
2024-06-18T18:23:33,992   adding 'skbio/io/format/_base.py'
2024-06-18T18:23:33,993   adding 'skbio/io/format/_blast.py'
2024-06-18T18:23:33,996   adding 'skbio/io/format/_sequence_feature_vocabulary.py'
2024-06-18T18:23:33,998   adding 'skbio/io/format/binary_dm.py'
2024-06-18T18:23:33,999   adding 'skbio/io/format/biom.py'
2024-06-18T18:23:34,002   adding 'skbio/io/format/blast6.py'
2024-06-18T18:23:34,004   adding 'skbio/io/format/blast7.py'
2024-06-18T18:23:34,007   adding 'skbio/io/format/clustal.py'
2024-06-18T18:23:34,009   adding 'skbio/io/format/embed.py'
2024-06-18T18:23:34,016   adding 'skbio/io/format/embl.py'
2024-06-18T18:23:34,018   adding 'skbio/io/format/emptyfile.py'
2024-06-18T18:23:34,023   adding 'skbio/io/format/fasta.py'
2024-06-18T18:23:34,026   adding 'skbio/io/format/fastq.py'
2024-06-18T18:23:34,030   adding 'skbio/io/format/genbank.py'
2024-06-18T18:23:34,033   adding 'skbio/io/format/gff3.py'
2024-06-18T18:23:34,035   adding 'skbio/io/format/lsmat.py'
2024-06-18T18:23:34,038   adding 'skbio/io/format/newick.py'
2024-06-18T18:23:34,041   adding 'skbio/io/format/ordination.py'
2024-06-18T18:23:34,044   adding 'skbio/io/format/phylip.py'
2024-06-18T18:23:34,046   adding 'skbio/io/format/qseq.py'
2024-06-18T18:23:34,049   adding 'skbio/io/format/sample_metadata.py'
2024-06-18T18:23:34,052   adding 'skbio/io/format/stockholm.py'
2024-06-18T18:23:34,055   adding 'skbio/io/format/taxdump.py'
2024-06-18T18:23:34,058   adding 'skbio/io/format/tests/__init__.py'
2024-06-18T18:23:34,060   adding 'skbio/io/format/tests/test_base.py'
2024-06-18T18:23:34,061   adding 'skbio/io/format/tests/test_binary_dm.py'
2024-06-18T18:23:34,063   adding 'skbio/io/format/tests/test_biom.py'
2024-06-18T18:23:34,065   adding 'skbio/io/format/tests/test_blast6.py'
2024-06-18T18:23:34,067   adding 'skbio/io/format/tests/test_blast7.py'
2024-06-18T18:23:34,069   adding 'skbio/io/format/tests/test_clustal.py'
2024-06-18T18:23:34,071   adding 'skbio/io/format/tests/test_embed.py'
2024-06-18T18:23:34,074   adding 'skbio/io/format/tests/test_embl.py'
2024-06-18T18:23:34,076   adding 'skbio/io/format/tests/test_emptyfile.py'
2024-06-18T18:23:34,081   adding 'skbio/io/format/tests/test_fasta.py'
2024-06-18T18:23:34,084   adding 'skbio/io/format/tests/test_fastq.py'
2024-06-18T18:23:34,086   adding 'skbio/io/format/tests/test_genbank.py'
2024-06-18T18:23:34,088   adding 'skbio/io/format/tests/test_gff3.py'
2024-06-18T18:23:34,090   adding 'skbio/io/format/tests/test_lsmat.py'
2024-06-18T18:23:34,092   adding 'skbio/io/format/tests/test_newick.py'
2024-06-18T18:23:34,094   adding 'skbio/io/format/tests/test_ordination.py'
2024-06-18T18:23:34,095   adding 'skbio/io/format/tests/test_phylip.py'
2024-06-18T18:23:34,097   adding 'skbio/io/format/tests/test_qseq.py'
2024-06-18T18:23:34,099   adding 'skbio/io/format/tests/test_sample_metadata.py'
2024-06-18T18:23:34,100   adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py'
2024-06-18T18:23:34,103   adding 'skbio/io/format/tests/test_stockholm.py'
2024-06-18T18:23:34,105   adding 'skbio/io/format/tests/test_taxdump.py'
2024-06-18T18:23:34,113   adding 'skbio/io/format/tests/data/blast6_custom_minimal'
2024-06-18T18:23:34,114   adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans'
2024-06-18T18:23:34,115   adding 'skbio/io/format/tests/data/blast6_custom_multi_line'
2024-06-18T18:23:34,116   adding 'skbio/io/format/tests/data/blast6_custom_single_line'
2024-06-18T18:23:34,117   adding 'skbio/io/format/tests/data/blast6_default_multi_line'
2024-06-18T18:23:34,118   adding 'skbio/io/format/tests/data/blast6_default_single_line'
2024-06-18T18:23:34,119   adding 'skbio/io/format/tests/data/blast6_invalid_column_types'
2024-06-18T18:23:34,121   adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns'
2024-06-18T18:23:34,122   adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column'
2024-06-18T18:23:34,123   adding 'skbio/io/format/tests/data/blast7_custom_minimal'
2024-06-18T18:23:34,124   adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans'
2024-06-18T18:23:34,125   adding 'skbio/io/format/tests/data/blast7_custom_multi_line'
2024-06-18T18:23:34,126   adding 'skbio/io/format/tests/data/blast7_custom_single_line'
2024-06-18T18:23:34,127   adding 'skbio/io/format/tests/data/blast7_default_multi_line'
2024-06-18T18:23:34,129   adding 'skbio/io/format/tests/data/blast7_default_single_line'
2024-06-18T18:23:34,130   adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields'
2024-06-18T18:23:34,131   adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer'
2024-06-18T18:23:34,132   adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2'
2024-06-18T18:23:34,133   adding 'skbio/io/format/tests/data/blast7_invalid_gibberish'
2024-06-18T18:23:34,134   adding 'skbio/io/format/tests/data/blast7_invalid_no_data'
2024-06-18T18:23:34,135   adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns'
2024-06-18T18:23:34,137   adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field'
2024-06-18T18:23:34,175   adding 'skbio/io/format/tests/data/embed1.txt.npy'
2024-06-18T18:23:34,215   adding 'skbio/io/format/tests/data/embed2.txt.npy'
2024-06-18T18:23:34,218   adding 'skbio/io/format/tests/data/embl_constructed'
2024-06-18T18:23:34,219   adding 'skbio/io/format/tests/data/embl_feature_level_record'
2024-06-18T18:23:34,221   adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT'
2024-06-18T18:23:34,222   adding 'skbio/io/format/tests/data/embl_multi_records'
2024-06-18T18:23:34,224   adding 'skbio/io/format/tests/data/embl_single_record'
2024-06-18T18:23:34,225   adding 'skbio/io/format/tests/data/embl_single_record_lower'
2024-06-18T18:23:34,226   adding 'skbio/io/format/tests/data/embl_single_record_simple'
2024-06-18T18:23:34,228   adding 'skbio/io/format/tests/data/embl_single_record_upper'
2024-06-18T18:23:34,229   adding 'skbio/io/format/tests/data/embl_uniprot_record'
2024-06-18T18:23:34,230   adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace'
2024-06-18T18:23:34,231   adding 'skbio/io/format/tests/data/empty'
2024-06-18T18:23:34,232   adding 'skbio/io/format/tests/data/error_diff_ids.fastq'
2024-06-18T18:23:34,233   adding 'skbio/io/format/tests/data/error_double_qual.fastq'
2024-06-18T18:23:34,235   adding 'skbio/io/format/tests/data/error_double_seq.fastq'
2024-06-18T18:23:34,236   adding 'skbio/io/format/tests/data/error_long_qual.fastq'
2024-06-18T18:23:34,237   adding 'skbio/io/format/tests/data/error_no_qual.fastq'
2024-06-18T18:23:34,238   adding 'skbio/io/format/tests/data/error_qual_del.fastq'
2024-06-18T18:23:34,239   adding 'skbio/io/format/tests/data/error_qual_escape.fastq'
2024-06-18T18:23:34,241   adding 'skbio/io/format/tests/data/error_qual_null.fastq'
2024-06-18T18:23:34,242   adding 'skbio/io/format/tests/data/error_qual_space.fastq'
2024-06-18T18:23:34,243   adding 'skbio/io/format/tests/data/error_qual_tab.fastq'
2024-06-18T18:23:34,247   adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq'
2024-06-18T18:23:34,248   adding 'skbio/io/format/tests/data/error_qual_vtab.fastq'
2024-06-18T18:23:34,249   adding 'skbio/io/format/tests/data/error_short_qual.fastq'
2024-06-18T18:23:34,251   adding 'skbio/io/format/tests/data/error_spaces.fastq'
2024-06-18T18:23:34,252   adding 'skbio/io/format/tests/data/error_tabs.fastq'
2024-06-18T18:23:34,253   adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq'
2024-06-18T18:23:34,254   adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq'
2024-06-18T18:23:34,255   adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq'
2024-06-18T18:23:34,257   adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq'
2024-06-18T18:23:34,258   adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq'
2024-06-18T18:23:34,259   adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq'
2024-06-18T18:23:34,260   adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq'
2024-06-18T18:23:34,261   adding 'skbio/io/format/tests/data/fasta_10_seqs'
2024-06-18T18:23:34,262   adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults'
2024-06-18T18:23:34,263   adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults'
2024-06-18T18:23:34,264   adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file'
2024-06-18T18:23:34,266   adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file'
2024-06-18T18:23:34,267   adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file'
2024-06-18T18:23:34,268   adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file'
2024-06-18T18:23:34,269   adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records'
2024-06-18T18:23:34,270   adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file'
2024-06-18T18:23:34,271   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str'
2024-06-18T18:23:34,273   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char'
2024-06-18T18:23:34,274   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none'
2024-06-18T18:23:34,275   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str'
2024-06-18T18:23:34,276   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char'
2024-06-18T18:23:34,277   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none'
2024-06-18T18:23:34,278   adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs'
2024-06-18T18:23:34,279   adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header'
2024-06-18T18:23:34,280   adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence'
2024-06-18T18:23:34,282   adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence'
2024-06-18T18:23:34,283   adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format'
2024-06-18T18:23:34,284   adding 'skbio/io/format/tests/data/fasta_invalid_missing_header'
2024-06-18T18:23:34,285   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first'
2024-06-18T18:23:34,286   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last'
2024-06-18T18:23:34,287   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle'
2024-06-18T18:23:34,288   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header'
2024-06-18T18:23:34,289   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence'
2024-06-18T18:23:34,290   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence'
2024-06-18T18:23:34,291   adding 'skbio/io/format/tests/data/fasta_max_width_1'
2024-06-18T18:23:34,292   adding 'skbio/io/format/tests/data/fasta_max_width_5'
2024-06-18T18:23:34,294   adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores'
2024-06-18T18:23:34,295   adding 'skbio/io/format/tests/data/fasta_multi_seq'
2024-06-18T18:23:34,296   adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip'
2024-06-18T18:23:34,297   adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels'
2024-06-18T18:23:34,298   adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults'
2024-06-18T18:23:34,299   adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults'
2024-06-18T18:23:34,300   adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults'
2024-06-18T18:23:34,301   adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults'
2024-06-18T18:23:34,302   adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults'
2024-06-18T18:23:34,303   adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults'
2024-06-18T18:23:34,305   adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults'
2024-06-18T18:23:34,306   adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults'
2024-06-18T18:23:34,307   adding 'skbio/io/format/tests/data/fasta_single_seq'
2024-06-18T18:23:34,308   adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type'
2024-06-18T18:23:34,309   adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records'
2024-06-18T18:23:34,310   adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file'
2024-06-18T18:23:34,311   adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file'
2024-06-18T18:23:34,312   adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file'
2024-06-18T18:23:34,314   adding 'skbio/io/format/tests/data/fastq_blank_lines'
2024-06-18T18:23:34,315   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header'
2024-06-18T18:23:34,316   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus'
2024-06-18T18:23:34,317   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq'
2024-06-18T18:23:34,318   adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol'
2024-06-18T18:23:34,319   adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual'
2024-06-18T18:23:34,320   adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq'
2024-06-18T18:23:34,322   adding 'skbio/io/format/tests/data/fastq_invalid_missing_header'
2024-06-18T18:23:34,323   adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data'
2024-06-18T18:23:34,324   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header'
2024-06-18T18:23:34,325   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus'
2024-06-18T18:23:34,326   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq'
2024-06-18T18:23:34,327   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual'
2024-06-18T18:23:34,328   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq'
2024-06-18T18:23:34,330   adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records'
2024-06-18T18:23:34,331   adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file'
2024-06-18T18:23:34,332   adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file'
2024-06-18T18:23:34,333   adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger'
2024-06-18T18:23:34,334   adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping'
2024-06-18T18:23:34,335   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records'
2024-06-18T18:23:34,336   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file'
2024-06-18T18:23:34,337   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file'
2024-06-18T18:23:34,338   adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3'
2024-06-18T18:23:34,339   adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8'
2024-06-18T18:23:34,341   adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines'
2024-06-18T18:23:34,342   adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description'
2024-06-18T18:23:34,343   adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description'
2024-06-18T18:23:34,344   adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description'
2024-06-18T18:23:34,345   adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults'
2024-06-18T18:23:34,346   adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults'
2024-06-18T18:23:34,348   adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults'
2024-06-18T18:23:34,349   adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file'
2024-06-18T18:23:34,350   adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file'
2024-06-18T18:23:34,351   adding 'skbio/io/format/tests/data/genbank_missing_locus_name'
2024-06-18T18:23:34,352   adding 'skbio/io/format/tests/data/genbank_multi_records'
2024-06-18T18:23:34,353   adding 'skbio/io/format/tests/data/genbank_single_record'
2024-06-18T18:23:34,355   adding 'skbio/io/format/tests/data/genbank_single_record_lower'
2024-06-18T18:23:34,356   adding 'skbio/io/format/tests/data/genbank_single_record_upper'
2024-06-18T18:23:34,357   adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace'
2024-06-18T18:23:34,358   adding 'skbio/io/format/tests/data/gff3_bad_missing_directive'
2024-06-18T18:23:34,359   adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns'
2024-06-18T18:23:34,360   adding 'skbio/io/format/tests/data/gff3_dna'
2024-06-18T18:23:34,361   adding 'skbio/io/format/tests/data/gff3_multi_record'
2024-06-18T18:23:34,362   adding 'skbio/io/format/tests/data/gff3_single_record'
2024-06-18T18:23:34,364   adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq'
2024-06-18T18:23:34,365   adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq'
2024-06-18T18:23:34,366   adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq'
2024-06-18T18:23:34,367   adding 'skbio/io/format/tests/data/legacy9_and_blast7_default'
2024-06-18T18:23:34,368   adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields'
2024-06-18T18:23:34,369   adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns'
2024-06-18T18:23:34,371   adding 'skbio/io/format/tests/data/legacy9_mixed_nans'
2024-06-18T18:23:34,372   adding 'skbio/io/format/tests/data/legacy9_multi_line'
2024-06-18T18:23:34,373   adding 'skbio/io/format/tests/data/legacy9_single_line'
2024-06-18T18:23:34,375   adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq'
2024-06-18T18:23:34,377   adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq'
2024-06-18T18:23:34,380   adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq'
2024-06-18T18:23:34,381   adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq'
2024-06-18T18:23:34,382   adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq'
2024-06-18T18:23:34,383   adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq'
2024-06-18T18:23:34,384   adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq'
2024-06-18T18:23:34,386   adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq'
2024-06-18T18:23:34,387   adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq'
2024-06-18T18:23:34,388   adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores'
2024-06-18T18:23:34,389   adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores'
2024-06-18T18:23:34,391   adding 'skbio/io/format/tests/data/ordination_error1'
2024-06-18T18:23:34,392   adding 'skbio/io/format/tests/data/ordination_error10'
2024-06-18T18:23:34,393   adding 'skbio/io/format/tests/data/ordination_error11'
2024-06-18T18:23:34,395   adding 'skbio/io/format/tests/data/ordination_error12'
2024-06-18T18:23:34,396   adding 'skbio/io/format/tests/data/ordination_error13'
2024-06-18T18:23:34,397   adding 'skbio/io/format/tests/data/ordination_error14'
2024-06-18T18:23:34,399   adding 'skbio/io/format/tests/data/ordination_error15'
2024-06-18T18:23:34,400   adding 'skbio/io/format/tests/data/ordination_error16'
2024-06-18T18:23:34,402   adding 'skbio/io/format/tests/data/ordination_error17'
2024-06-18T18:23:34,403   adding 'skbio/io/format/tests/data/ordination_error18'
2024-06-18T18:23:34,404   adding 'skbio/io/format/tests/data/ordination_error19'
2024-06-18T18:23:34,406   adding 'skbio/io/format/tests/data/ordination_error2'
2024-06-18T18:23:34,407   adding 'skbio/io/format/tests/data/ordination_error20'
2024-06-18T18:23:34,408   adding 'skbio/io/format/tests/data/ordination_error21'
2024-06-18T18:23:34,409   adding 'skbio/io/format/tests/data/ordination_error22'
2024-06-18T18:23:34,410   adding 'skbio/io/format/tests/data/ordination_error23'
2024-06-18T18:23:34,411   adding 'skbio/io/format/tests/data/ordination_error24'
2024-06-18T18:23:34,413   adding 'skbio/io/format/tests/data/ordination_error3'
2024-06-18T18:23:34,414   adding 'skbio/io/format/tests/data/ordination_error4'
2024-06-18T18:23:34,416   adding 'skbio/io/format/tests/data/ordination_error5'
2024-06-18T18:23:34,417   adding 'skbio/io/format/tests/data/ordination_error6'
2024-06-18T18:23:34,418   adding 'skbio/io/format/tests/data/ordination_error7'
2024-06-18T18:23:34,420   adding 'skbio/io/format/tests/data/ordination_error8'
2024-06-18T18:23:34,421   adding 'skbio/io/format/tests/data/ordination_error9'
2024-06-18T18:23:34,422   adding 'skbio/io/format/tests/data/ordination_example2_scores'
2024-06-18T18:23:34,424   adding 'skbio/io/format/tests/data/ordination_example3_scores'
2024-06-18T18:23:34,425   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site'
2024-06-18T18:23:34,427   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints'
2024-06-18T18:23:34,428   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species'
2024-06-18T18:23:34,429   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site'
2024-06-18T18:23:34,431   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site'
2024-06-18T18:23:34,432   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints'
2024-06-18T18:23:34,433   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species'
2024-06-18T18:23:34,434   adding 'skbio/io/format/tests/data/phylip_dna_3_seqs'
2024-06-18T18:23:34,436   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header'
2024-06-18T18:23:34,437   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header'
2024-06-18T18:23:34,438   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs'
2024-06-18T18:23:34,439   adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long'
2024-06-18T18:23:34,440   adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short'
2024-06-18T18:23:34,441   adding 'skbio/io/format/tests/data/phylip_invalid_no_header'
2024-06-18T18:23:34,442   adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long'
2024-06-18T18:23:34,443   adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short'
2024-06-18T18:23:34,444   adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs'
2024-06-18T18:23:34,445   adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs'
2024-06-18T18:23:34,446   adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len'
2024-06-18T18:23:34,448   adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs'
2024-06-18T18:23:34,449   adding 'skbio/io/format/tests/data/phylip_single_seq_long'
2024-06-18T18:23:34,450   adding 'skbio/io/format/tests/data/phylip_single_seq_short'
2024-06-18T18:23:34,451   adding 'skbio/io/format/tests/data/phylip_two_chunks'
2024-06-18T18:23:34,452   adding 'skbio/io/format/tests/data/phylip_variable_length_ids'
2024-06-18T18:23:34,453   adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs'
2024-06-18T18:23:34,454   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1'
2024-06-18T18:23:34,455   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2'
2024-06-18T18:23:34,457   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3'
2024-06-18T18:23:34,496   adding 'skbio/io/format/tests/data/prot.emb'
2024-06-18T18:23:34,499   adding 'skbio/io/format/tests/data/prot_vec.emb'
2024-06-18T18:23:34,501   adding 'skbio/io/format/tests/data/qseq_invalid_filter'
2024-06-18T18:23:34,502   adding 'skbio/io/format/tests/data/qseq_invalid_lane'
2024-06-18T18:23:34,503   adding 'skbio/io/format/tests/data/qseq_invalid_read'
2024-06-18T18:23:34,504   adding 'skbio/io/format/tests/data/qseq_invalid_tile'
2024-06-18T18:23:34,505   adding 'skbio/io/format/tests/data/qseq_invalid_x'
2024-06-18T18:23:34,507   adding 'skbio/io/format/tests/data/qseq_invalid_y'
2024-06-18T18:23:34,508   adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3'
2024-06-18T18:23:34,509   adding 'skbio/io/format/tests/data/qseq_single_seq_sanger'
2024-06-18T18:23:34,510   adding 'skbio/io/format/tests/data/qual_2_seqs_defaults'
2024-06-18T18:23:34,511   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults'
2024-06-18T18:23:34,512   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch'
2024-06-18T18:23:34,513   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra'
2024-06-18T18:23:34,514   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch'
2024-06-18T18:23:34,516   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch'
2024-06-18T18:23:34,517   adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults'
2024-06-18T18:23:34,518   adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file'
2024-06-18T18:23:34,519   adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file'
2024-06-18T18:23:34,520   adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file'
2024-06-18T18:23:34,521   adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file'
2024-06-18T18:23:34,522   adding 'skbio/io/format/tests/data/qual_blank_lines_between_records'
2024-06-18T18:23:34,524   adding 'skbio/io/format/tests/data/qual_blanks_end_of_file'
2024-06-18T18:23:34,525   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str'
2024-06-18T18:23:34,526   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char'
2024-06-18T18:23:34,527   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none'
2024-06-18T18:23:34,528   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str'
2024-06-18T18:23:34,529   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char'
2024-06-18T18:23:34,530   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none'
2024-06-18T18:23:34,531   adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header'
2024-06-18T18:23:34,532   adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq'
2024-06-18T18:23:34,534   adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence'
2024-06-18T18:23:34,535   adding 'skbio/io/format/tests/data/qual_invalid_legacy_format'
2024-06-18T18:23:34,536   adding 'skbio/io/format/tests/data/qual_invalid_missing_header'
2024-06-18T18:23:34,537   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first'
2024-06-18T18:23:34,538   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last'
2024-06-18T18:23:34,539   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle'
2024-06-18T18:23:34,540   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float'
2024-06-18T18:23:34,541   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative'
2024-06-18T18:23:34,542   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255'
2024-06-18T18:23:34,543   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string'
2024-06-18T18:23:34,544   adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq'
2024-06-18T18:23:34,546   adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence'
2024-06-18T18:23:34,547   adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header'
2024-06-18T18:23:34,548   adding 'skbio/io/format/tests/data/qual_max_width_1'
2024-06-18T18:23:34,549   adding 'skbio/io/format/tests/data/qual_max_width_5'
2024-06-18T18:23:34,550   adding 'skbio/io/format/tests/data/qual_multi_seq'
2024-06-18T18:23:34,551   adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip'
2024-06-18T18:23:34,552   adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels'
2024-06-18T18:23:34,553   adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults'
2024-06-18T18:23:34,554   adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults'
2024-06-18T18:23:34,555   adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults'
2024-06-18T18:23:34,556   adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults'
2024-06-18T18:23:34,558   adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults'
2024-06-18T18:23:34,559   adding 'skbio/io/format/tests/data/qual_single_seq'
2024-06-18T18:23:34,560   adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type'
2024-06-18T18:23:34,561   adding 'skbio/io/format/tests/data/qual_ws_lines_between_records'
2024-06-18T18:23:34,562   adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file'
2024-06-18T18:23:34,563   adding 'skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv'
2024-06-18T18:23:34,564   adding 'skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv'
2024-06-18T18:23:34,566   adding 'skbio/io/format/tests/data/sample-metadata-comments.tsv'
2024-06-18T18:23:34,567   adding 'skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv'
2024-06-18T18:23:34,568   adding 'skbio/io/format/tests/data/sample-metadata-empty-rows.tsv'
2024-06-18T18:23:34,569   adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv'
2024-06-18T18:23:34,570   adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv'
2024-06-18T18:23:34,571   adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq'
2024-06-18T18:23:34,573   adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq'
2024-06-18T18:23:34,574   adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq'
2024-06-18T18:23:34,575   adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq'
2024-06-18T18:23:34,576   adding 'skbio/io/format/tests/data/stockholm_all_data_types'
2024-06-18T18:23:34,577   adding 'skbio/io/format/tests/data/stockholm_blank_lines'
2024-06-18T18:23:34,578   adding 'skbio/io/format/tests/data/stockholm_data_only'
2024-06-18T18:23:34,579   adding 'skbio/io/format/tests/data/stockholm_different_padding'
2024-06-18T18:23:34,581   adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length'
2024-06-18T18:23:34,582   adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length'
2024-06-18T18:23:34,583   adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths'
2024-06-18T18:23:34,584   adding 'skbio/io/format/tests/data/stockholm_duplicate_gc'
2024-06-18T18:23:34,585   adding 'skbio/io/format/tests/data/stockholm_duplicate_gr'
2024-06-18T18:23:34,586   adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names'
2024-06-18T18:23:34,587   adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids'
2024-06-18T18:23:34,589   adding 'skbio/io/format/tests/data/stockholm_extensive'
2024-06-18T18:23:34,590   adding 'skbio/io/format/tests/data/stockholm_extensive_mixed'
2024-06-18T18:23:34,591   adding 'skbio/io/format/tests/data/stockholm_invalid_data_type'
2024-06-18T18:23:34,592   adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr'
2024-06-18T18:23:34,593   adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs'
2024-06-18T18:23:34,594   adding 'skbio/io/format/tests/data/stockholm_malformed_data_line'
2024-06-18T18:23:34,596   adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line'
2024-06-18T18:23:34,597   adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line'
2024-06-18T18:23:34,598   adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line'
2024-06-18T18:23:34,599   adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line'
2024-06-18T18:23:34,600   adding 'skbio/io/format/tests/data/stockholm_metadata_only'
2024-06-18T18:23:34,601   adding 'skbio/io/format/tests/data/stockholm_minimal'
2024-06-18T18:23:34,602   adding 'skbio/io/format/tests/data/stockholm_missing_footer'
2024-06-18T18:23:34,603   adding 'skbio/io/format/tests/data/stockholm_missing_header'
2024-06-18T18:23:34,605   adding 'skbio/io/format/tests/data/stockholm_missing_reference_items'
2024-06-18T18:23:34,606   adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag'
2024-06-18T18:23:34,607   adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id'
2024-06-18T18:23:34,608   adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id'
2024-06-18T18:23:34,609   adding 'skbio/io/format/tests/data/stockholm_multiple_msa'
2024-06-18T18:23:34,610   adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees'
2024-06-18T18:23:34,611   adding 'skbio/io/format/tests/data/stockholm_multiple_references'
2024-06-18T18:23:34,612   adding 'skbio/io/format/tests/data/stockholm_multiple_trees'
2024-06-18T18:23:34,614   adding 'skbio/io/format/tests/data/stockholm_no_data'
2024-06-18T18:23:34,615   adding 'skbio/io/format/tests/data/stockholm_nonstring_labels'
2024-06-18T18:23:34,616   adding 'skbio/io/format/tests/data/stockholm_rna'
2024-06-18T18:23:34,617   adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace'
2024-06-18T18:23:34,618   adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace'
2024-06-18T18:23:34,619   adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace'
2024-06-18T18:23:34,621   adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace'
2024-06-18T18:23:34,622   adding 'skbio/io/format/tests/data/stockholm_runon_references'
2024-06-18T18:23:34,623   adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed'
2024-06-18T18:23:34,624   adding 'skbio/io/format/tests/data/stockholm_single_reference'
2024-06-18T18:23:34,625   adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id'
2024-06-18T18:23:34,626   adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id'
2024-06-18T18:23:34,628   adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata'
2024-06-18T18:23:34,629   adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines'
2024-06-18T18:23:34,630   adding 'skbio/io/format/tests/data/taxdump_names.dmp'
2024-06-18T18:23:34,631   adding 'skbio/io/format/tests/data/taxdump_nodes.dmp'
2024-06-18T18:23:34,632   adding 'skbio/io/format/tests/data/tsv_10_fields'
2024-06-18T18:23:34,633   adding 'skbio/io/format/tests/data/tsv_8_fields'
2024-06-18T18:23:34,634   adding 'skbio/io/format/tests/data/whitespace_only'
2024-06-18T18:23:34,636   adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq'
2024-06-18T18:23:34,637   adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq'
2024-06-18T18:23:34,638   adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq'
2024-06-18T18:23:34,640   adding 'skbio/io/tests/__init__.py'
2024-06-18T18:23:34,641   adding 'skbio/io/tests/test_iosources.py'
2024-06-18T18:23:34,646   adding 'skbio/io/tests/test_registry.py'
2024-06-18T18:23:34,649   adding 'skbio/io/tests/test_util.py'
2024-06-18T18:23:34,651   adding 'skbio/io/tests/data/big5_file'
2024-06-18T18:23:34,652   adding 'skbio/io/tests/data/big5_file.bz2'
2024-06-18T18:23:34,653   adding 'skbio/io/tests/data/big5_file.gz'
2024-06-18T18:23:34,654   adding 'skbio/io/tests/data/example_file'
2024-06-18T18:23:34,655   adding 'skbio/io/tests/data/example_file.bz2'
2024-06-18T18:23:34,657   adding 'skbio/io/tests/data/example_file.gz'
2024-06-18T18:23:34,658   adding 'skbio/io/tests/data/real_file'
2024-06-18T18:23:34,659   adding 'skbio/io/tests/data/real_file_2'
2024-06-18T18:23:34,661   adding 'skbio/metadata/__init__.py'
2024-06-18T18:23:34,663   adding 'skbio/metadata/_enan.py'
2024-06-18T18:23:34,819   adding 'skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so'
2024-06-18T18:23:34,829   adding 'skbio/metadata/_interval.py'
2024-06-18T18:23:34,834   adding 'skbio/metadata/_metadata.py'
2024-06-18T18:23:34,837   adding 'skbio/metadata/_mixin.py'
2024-06-18T18:23:34,839   adding 'skbio/metadata/_repr.py'
2024-06-18T18:23:34,842   adding 'skbio/metadata/_testing.py'
2024-06-18T18:23:34,844   adding 'skbio/metadata/base.py'
2024-06-18T18:23:34,847   adding 'skbio/metadata/io.py'
2024-06-18T18:23:34,848   adding 'skbio/metadata/missing.py'
2024-06-18T18:23:34,850   adding 'skbio/metadata/tests/__init__.py'
2024-06-18T18:23:34,852   adding 'skbio/metadata/tests/test_enan.py'
2024-06-18T18:23:34,853   adding 'skbio/metadata/tests/test_intersection.py'
2024-06-18T18:23:34,856   adding 'skbio/metadata/tests/test_interval.py'
2024-06-18T18:23:34,861   adding 'skbio/metadata/tests/test_io.py'
2024-06-18T18:23:34,864   adding 'skbio/metadata/tests/test_metadata.py'
2024-06-18T18:23:34,867   adding 'skbio/metadata/tests/test_metadata_column.py'
2024-06-18T18:23:34,869   adding 'skbio/metadata/tests/test_missing.py'
2024-06-18T18:23:34,870   adding 'skbio/metadata/tests/test_mixin.py'
2024-06-18T18:23:34,873   adding 'skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv'
2024-06-18T18:23:34,874   adding 'skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv'
2024-06-18T18:23:34,875   adding 'skbio/metadata/tests/data/invalid/data-longer-than-header.tsv'
2024-06-18T18:23:34,876   adding 'skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv'
2024-06-18T18:23:34,878   adding 'skbio/metadata/tests/data/invalid/directive-before-header.tsv'
2024-06-18T18:23:34,879   adding 'skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv'
2024-06-18T18:23:34,880   adding 'skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv'
2024-06-18T18:23:34,881   adding 'skbio/metadata/tests/data/invalid/duplicate-column-names.tsv'
2024-06-18T18:23:34,882   adding 'skbio/metadata/tests/data/invalid/duplicate-directives.tsv'
2024-06-18T18:23:34,883   adding 'skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv'
2024-06-18T18:23:34,885   adding 'skbio/metadata/tests/data/invalid/duplicate-ids.tsv'
2024-06-18T18:23:34,886   adding 'skbio/metadata/tests/data/invalid/empty-column-name.tsv'
2024-06-18T18:23:34,887   adding 'skbio/metadata/tests/data/invalid/empty-file'
2024-06-18T18:23:34,888   adding 'skbio/metadata/tests/data/invalid/empty-id.tsv'
2024-06-18T18:23:34,889   adding 'skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv'
2024-06-18T18:23:34,890   adding 'skbio/metadata/tests/data/invalid/header-only.tsv'
2024-06-18T18:23:34,892   adding 'skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv'
2024-06-18T18:23:34,893   adding 'skbio/metadata/tests/data/invalid/invalid-header.tsv'
2024-06-18T18:23:34,894   adding 'skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv'
2024-06-18T18:23:34,895   adding 'skbio/metadata/tests/data/invalid/non-utf-8.tsv'
2024-06-18T18:23:34,897   adding 'skbio/metadata/tests/data/invalid/qiime1-empty.tsv'
2024-06-18T18:23:34,898   adding 'skbio/metadata/tests/data/invalid/simple-utf-16be.txt'
2024-06-18T18:23:34,899   adding 'skbio/metadata/tests/data/invalid/simple-utf-16le.txt'
2024-06-18T18:23:34,900   adding 'skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv'
2024-06-18T18:23:34,901   adding 'skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv'
2024-06-18T18:23:34,902   adding 'skbio/metadata/tests/data/invalid/unrecognized-directive.tsv'
2024-06-18T18:23:34,903   adding 'skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv'
2024-06-18T18:23:34,905   adding 'skbio/metadata/tests/data/invalid/whitespace-only-id.tsv'
2024-06-18T18:23:34,907   adding 'skbio/metadata/tests/data/valid/BOM-simple.txt'
2024-06-18T18:23:34,908   adding 'skbio/metadata/tests/data/valid/all-cells-padded.tsv'
2024-06-18T18:23:34,909   adding 'skbio/metadata/tests/data/valid/biom-observation-metadata.tsv'
2024-06-18T18:23:34,910   adding 'skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv'
2024-06-18T18:23:34,911   adding 'skbio/metadata/tests/data/valid/column-order.tsv'
2024-06-18T18:23:34,913   adding 'skbio/metadata/tests/data/valid/comments.tsv'
2024-06-18T18:23:34,914   adding 'skbio/metadata/tests/data/valid/complete-types-directive.tsv'
2024-06-18T18:23:34,915   adding 'skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv'
2024-06-18T18:23:34,916   adding 'skbio/metadata/tests/data/valid/empty-rows.tsv'
2024-06-18T18:23:34,917   adding 'skbio/metadata/tests/data/valid/empty-types-directive.tsv'
2024-06-18T18:23:34,918   adding 'skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv'
2024-06-18T18:23:34,920   adding 'skbio/metadata/tests/data/valid/jagged.tsv'
2024-06-18T18:23:34,921   adding 'skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv'
2024-06-18T18:23:34,922   adding 'skbio/metadata/tests/data/valid/mac-line-endings.tsv'
2024-06-18T18:23:34,923   adding 'skbio/metadata/tests/data/valid/minimal.tsv'
2024-06-18T18:23:34,924   adding 'skbio/metadata/tests/data/valid/missing-data.tsv'
2024-06-18T18:23:34,925   adding 'skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv'
2024-06-18T18:23:34,926   adding 'skbio/metadata/tests/data/valid/missing-insdc.tsv'
2024-06-18T18:23:34,927   adding 'skbio/metadata/tests/data/valid/no-columns.tsv'
2024-06-18T18:23:34,929   adding 'skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv'
2024-06-18T18:23:34,930   adding 'skbio/metadata/tests/data/valid/no-newline-at-eof.tsv'
2024-06-18T18:23:34,931   adding 'skbio/metadata/tests/data/valid/non-standard-characters.tsv'
2024-06-18T18:23:34,932   adding 'skbio/metadata/tests/data/valid/numeric-column.tsv'
2024-06-18T18:23:34,933   adding 'skbio/metadata/tests/data/valid/override-insdc.tsv'
2024-06-18T18:23:34,934   adding 'skbio/metadata/tests/data/valid/partial-types-directive.tsv'
2024-06-18T18:23:34,935   adding 'skbio/metadata/tests/data/valid/qiime1.tsv'
2024-06-18T18:23:34,937   adding 'skbio/metadata/tests/data/valid/qiita-preparation-information.tsv'
2024-06-18T18:23:34,938   adding 'skbio/metadata/tests/data/valid/qiita-sample-information.tsv'
2024-06-18T18:23:34,939   adding 'skbio/metadata/tests/data/valid/recommended-ids.tsv'
2024-06-18T18:23:34,940   adding 'skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv'
2024-06-18T18:23:34,941   adding 'skbio/metadata/tests/data/valid/simple-with-directive.tsv'
2024-06-18T18:23:34,942   adding 'skbio/metadata/tests/data/valid/simple.tsv'
2024-06-18T18:23:34,943   adding 'skbio/metadata/tests/data/valid/simple.txt'
2024-06-18T18:23:34,945   adding 'skbio/metadata/tests/data/valid/single-column.tsv'
2024-06-18T18:23:34,946   adding 'skbio/metadata/tests/data/valid/single-id.tsv'
2024-06-18T18:23:34,947   adding 'skbio/metadata/tests/data/valid/trailing-columns.tsv'
2024-06-18T18:23:34,948   adding 'skbio/metadata/tests/data/valid/unix-line-endings.tsv'
2024-06-18T18:23:34,949   adding 'skbio/metadata/tests/data/valid/windows-line-endings.tsv'
2024-06-18T18:23:34,951   adding 'skbio/sequence/__init__.py'
2024-06-18T18:23:34,953   adding 'skbio/sequence/_alphabet.py'
2024-06-18T18:23:34,955   adding 'skbio/sequence/_dna.py'
2024-06-18T18:23:34,959   adding 'skbio/sequence/_genetic_code.py'
2024-06-18T18:23:34,962   adding 'skbio/sequence/_grammared_sequence.py'
2024-06-18T18:23:34,964   adding 'skbio/sequence/_nucleotide_mixin.py'
2024-06-18T18:23:34,966   adding 'skbio/sequence/_protein.py'
2024-06-18T18:23:34,968   adding 'skbio/sequence/_repr.py'
2024-06-18T18:23:34,970   adding 'skbio/sequence/_rna.py'
2024-06-18T18:23:34,979   adding 'skbio/sequence/_sequence.py'
2024-06-18T18:23:34,983   adding 'skbio/sequence/_substitution.py'
2024-06-18T18:23:34,985   adding 'skbio/sequence/distance.py'
2024-06-18T18:23:34,987   adding 'skbio/sequence/tests/__init__.py'
2024-06-18T18:23:34,989   adding 'skbio/sequence/tests/test_alphabet.py'
2024-06-18T18:23:34,990   adding 'skbio/sequence/tests/test_distance.py'
2024-06-18T18:23:34,992   adding 'skbio/sequence/tests/test_dna.py'
2024-06-18T18:23:34,994   adding 'skbio/sequence/tests/test_genetic_code.py'
2024-06-18T18:23:34,997   adding 'skbio/sequence/tests/test_grammared_sequence.py'
2024-06-18T18:23:34,999   adding 'skbio/sequence/tests/test_nucleotide_sequences.py'
2024-06-18T18:23:35,001   adding 'skbio/sequence/tests/test_protein.py'
2024-06-18T18:23:35,002   adding 'skbio/sequence/tests/test_rna.py'
2024-06-18T18:23:35,011   adding 'skbio/sequence/tests/test_sequence.py'
2024-06-18T18:23:35,014   adding 'skbio/sequence/tests/test_substitution.py'
2024-06-18T18:23:35,016   adding 'skbio/stats/__init__.py'
2024-06-18T18:23:35,017   adding 'skbio/stats/_misc.py'
2024-06-18T18:23:35,019   adding 'skbio/stats/_subsample.py'
2024-06-18T18:23:35,027   adding 'skbio/stats/composition.py'
2024-06-18T18:23:35,031   adding 'skbio/stats/gradient.py'
2024-06-18T18:23:35,037   adding 'skbio/stats/power.py'
2024-06-18T18:23:35,040   adding 'skbio/stats/distance/__init__.py'
2024-06-18T18:23:35,042   adding 'skbio/stats/distance/_anosim.py'
2024-06-18T18:23:35,047   adding 'skbio/stats/distance/_base.py'
2024-06-18T18:23:35,049   adding 'skbio/stats/distance/_bioenv.py'
2024-06-18T18:23:35,408   adding 'skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so'
2024-06-18T18:23:35,423   adding 'skbio/stats/distance/_mantel.py'
2024-06-18T18:23:35,425   adding 'skbio/stats/distance/_permanova.py'
2024-06-18T18:23:35,427   adding 'skbio/stats/distance/_permdisp.py'
2024-06-18T18:23:35,429   adding 'skbio/stats/distance/_utils.py'
2024-06-18T18:23:35,431   adding 'skbio/stats/distance/tests/__init__.py'
2024-06-18T18:23:35,432   adding 'skbio/stats/distance/tests/test_anosim.py'
2024-06-18T18:23:35,437   adding 'skbio/stats/distance/tests/test_base.py'
2024-06-18T18:23:35,439   adding 'skbio/stats/distance/tests/test_bioenv.py'
2024-06-18T18:23:35,442   adding 'skbio/stats/distance/tests/test_mantel.py'
2024-06-18T18:23:35,444   adding 'skbio/stats/distance/tests/test_permanova.py'
2024-06-18T18:23:35,446   adding 'skbio/stats/distance/tests/test_permdisp.py'
2024-06-18T18:23:35,448   adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt'
2024-06-18T18:23:35,450   adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt'
2024-06-18T18:23:35,451   adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt'
2024-06-18T18:23:35,452   adding 'skbio/stats/distance/tests/data/df.txt'
2024-06-18T18:23:35,454   adding 'skbio/stats/distance/tests/data/df_extra_column.txt'
2024-06-18T18:23:35,455   adding 'skbio/stats/distance/tests/data/dm.txt'
2024-06-18T18:23:35,456   adding 'skbio/stats/distance/tests/data/dm2.txt'
2024-06-18T18:23:35,457   adding 'skbio/stats/distance/tests/data/dm3.txt'
2024-06-18T18:23:35,458   adding 'skbio/stats/distance/tests/data/dm4.txt'
2024-06-18T18:23:35,459   adding 'skbio/stats/distance/tests/data/dm_reordered.txt'
2024-06-18T18:23:35,461   adding 'skbio/stats/distance/tests/data/exp_results.txt'
2024-06-18T18:23:35,462   adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt'
2024-06-18T18:23:35,463   adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt'
2024-06-18T18:23:35,468   adding 'skbio/stats/distance/tests/data/frameSeries_dm.tsv'
2024-06-18T18:23:35,470   adding 'skbio/stats/distance/tests/data/frameSeries_grouping.tsv'
2024-06-18T18:23:35,471   adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt'
2024-06-18T18:23:35,473   adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt'
2024-06-18T18:23:35,477   adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv'
2024-06-18T18:23:35,478   adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv'
2024-06-18T18:23:35,479   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt'
2024-06-18T18:23:35,481   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt'
2024-06-18T18:23:35,482   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt'
2024-06-18T18:23:35,483   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt'
2024-06-18T18:23:35,484   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt'
2024-06-18T18:23:35,485   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt'
2024-06-18T18:23:35,486   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt'
2024-06-18T18:23:35,488   adding 'skbio/stats/evolve/__init__.py'
2024-06-18T18:23:35,490   adding 'skbio/stats/evolve/_hommola.py'
2024-06-18T18:23:35,492   adding 'skbio/stats/evolve/tests/__init__.py'
2024-06-18T18:23:35,494   adding 'skbio/stats/evolve/tests/test_hommola.py'
2024-06-18T18:23:35,496   adding 'skbio/stats/ordination/__init__.py'
2024-06-18T18:23:35,498   adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py'
2024-06-18T18:23:35,500   adding 'skbio/stats/ordination/_correspondence_analysis.py'
2024-06-18T18:23:35,772   adding 'skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so'
2024-06-18T18:23:35,783   adding 'skbio/stats/ordination/_ordination_results.py'
2024-06-18T18:23:35,786   adding 'skbio/stats/ordination/_principal_coordinate_analysis.py'
2024-06-18T18:23:35,788   adding 'skbio/stats/ordination/_redundancy_analysis.py'
2024-06-18T18:23:35,790   adding 'skbio/stats/ordination/_utils.py'
2024-06-18T18:23:35,792   adding 'skbio/stats/ordination/tests/__init__.py'
2024-06-18T18:23:35,794   adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py'
2024-06-18T18:23:35,795   adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py'
2024-06-18T18:23:35,797   adding 'skbio/stats/ordination/tests/test_ordination_results.py'
2024-06-18T18:23:35,799   adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py'
2024-06-18T18:23:35,801   adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py'
2024-06-18T18:23:35,803   adding 'skbio/stats/ordination/tests/test_util.py'
2024-06-18T18:23:35,805   adding 'skbio/stats/ordination/tests/data/L&L_CA_data'
2024-06-18T18:23:35,806   adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors'
2024-06-18T18:23:35,807   adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors'
2024-06-18T18:23:35,809   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data'
2024-06-18T18:23:35,810   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim'
2024-06-18T18:23:35,811   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2'
2024-06-18T18:23:35,813   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3'
2024-06-18T18:23:35,814   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim'
2024-06-18T18:23:35,815   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim'
2024-06-18T18:23:35,817   adding 'skbio/stats/ordination/tests/data/PCoA_skbio'
2024-06-18T18:23:35,818   adding 'skbio/stats/ordination/tests/data/example2_X'
2024-06-18T18:23:35,819   adding 'skbio/stats/ordination/tests/data/example2_Y'
2024-06-18T18:23:35,820   adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1'
2024-06-18T18:23:35,821   adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2'
2024-06-18T18:23:35,822   adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1'
2024-06-18T18:23:35,823   adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2'
2024-06-18T18:23:35,825   adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan'
2024-06-18T18:23:35,826   adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan'
2024-06-18T18:23:35,827   adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan'
2024-06-18T18:23:35,828   adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan'
2024-06-18T18:23:35,829   adding 'skbio/stats/ordination/tests/data/example3_X'
2024-06-18T18:23:35,830   adding 'skbio/stats/ordination/tests/data/example3_Y'
2024-06-18T18:23:35,832   adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1'
2024-06-18T18:23:35,833   adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2'
2024-06-18T18:23:35,834   adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1'
2024-06-18T18:23:35,835   adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2'
2024-06-18T18:23:35,837   adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan'
2024-06-18T18:23:35,838   adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan'
2024-06-18T18:23:35,839   adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan'
2024-06-18T18:23:35,840   adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan'
2024-06-18T18:23:35,841   adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site'
2024-06-18T18:23:35,843   adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site'
2024-06-18T18:23:35,844   adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv'
2024-06-18T18:23:35,846   adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv'
2024-06-18T18:23:35,847   adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv'
2024-06-18T18:23:35,848   adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv'
2024-06-18T18:23:35,849   adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv'
2024-06-18T18:23:35,851   adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv'
2024-06-18T18:23:35,853   adding 'skbio/stats/ordination/tests/data/varechem.csv'
2024-06-18T18:23:35,854   adding 'skbio/stats/ordination/tests/data/varespec.csv'
2024-06-18T18:23:35,856   adding 'skbio/stats/tests/__init__.py'
2024-06-18T18:23:35,861   adding 'skbio/stats/tests/test_composition.py'
2024-06-18T18:23:35,865   adding 'skbio/stats/tests/test_gradient.py'
2024-06-18T18:23:35,867   adding 'skbio/stats/tests/test_misc.py'
2024-06-18T18:23:35,869   adding 'skbio/stats/tests/test_power.py'
2024-06-18T18:23:35,871   adding 'skbio/stats/tests/test_subsample.py'
2024-06-18T18:23:35,873   adding 'skbio/stats/tests/data/cr_data_out'
2024-06-18T18:23:35,874   adding 'skbio/stats/tests/data/cr_data_raw'
2024-06-18T18:23:35,875   adding 'skbio/stats/tests/data/cr_no_data_out'
2024-06-18T18:23:35,876   adding 'skbio/stats/tests/data/cr_no_data_raw'
2024-06-18T18:23:35,877   adding 'skbio/stats/tests/data/gr_w_msg_out'
2024-06-18T18:23:35,878   adding 'skbio/stats/tests/data/gr_w_msg_raw'
2024-06-18T18:23:35,880   adding 'skbio/stats/tests/data/gr_wo_msg_out'
2024-06-18T18:23:35,881   adding 'skbio/stats/tests/data/gr_wo_msg_raw'
2024-06-18T18:23:35,882   adding 'skbio/stats/tests/data/vr_out'
2024-06-18T18:23:35,883   adding 'skbio/stats/tests/data/vr_raw'
2024-06-18T18:23:35,884   adding 'skbio/stats/tests/data/vr_real_out'
2024-06-18T18:23:35,885   adding 'skbio/stats/tests/data/vr_real_raw'
2024-06-18T18:23:35,887   adding 'skbio/table/__init__.py'
2024-06-18T18:23:35,888   adding 'skbio/table/_base.py'
2024-06-18T18:23:35,890   adding 'skbio/table/tests/__init__.py'
2024-06-18T18:23:35,891   adding 'skbio/table/tests/test_base.py'
2024-06-18T18:23:35,893   adding 'skbio/tests/__init__.py'
2024-06-18T18:23:35,894   adding 'skbio/tests/test_base.py'
2024-06-18T18:23:35,896   adding 'skbio/tests/test_workflow.py'
2024-06-18T18:23:35,899   adding 'skbio/tree/__init__.py'
2024-06-18T18:23:35,900   adding 'skbio/tree/_exception.py'
2024-06-18T18:23:35,902   adding 'skbio/tree/_majority_rule.py'
2024-06-18T18:23:35,904   adding 'skbio/tree/_nj.py'
2024-06-18T18:23:35,916   adding 'skbio/tree/_tree.py'
2024-06-18T18:23:35,918   adding 'skbio/tree/tests/__init__.py'
2024-06-18T18:23:35,920   adding 'skbio/tree/tests/test_majority_rule.py'
2024-06-18T18:23:35,921   adding 'skbio/tree/tests/test_nj.py'
2024-06-18T18:23:35,927   adding 'skbio/tree/tests/test_tree.py'
2024-06-18T18:23:35,930   adding 'skbio/util/__init__.py'
2024-06-18T18:23:35,931   adding 'skbio/util/_decorator.py'
2024-06-18T18:23:35,933   adding 'skbio/util/_exception.py'
2024-06-18T18:23:35,934   adding 'skbio/util/_misc.py'
2024-06-18T18:23:35,936   adding 'skbio/util/_plotting.py'
2024-06-18T18:23:35,938   adding 'skbio/util/_testing.py'
2024-06-18T18:23:35,939   adding 'skbio/util/_warning.py'
2024-06-18T18:23:35,941   adding 'skbio/util/tests/__init__.py'
2024-06-18T18:23:35,943   adding 'skbio/util/tests/test_decorator.py'
2024-06-18T18:23:35,944   adding 'skbio/util/tests/test_misc.py'
2024-06-18T18:23:35,946   adding 'skbio/util/tests/test_plotting.py'
2024-06-18T18:23:35,948   adding 'skbio/util/tests/test_testing.py'
2024-06-18T18:23:35,949   adding 'scikit_bio-0.6.1.dist-info/LICENSE.txt'
2024-06-18T18:23:35,951   adding 'scikit_bio-0.6.1.dist-info/METADATA'
2024-06-18T18:23:35,952   adding 'scikit_bio-0.6.1.dist-info/WHEEL'
2024-06-18T18:23:35,953   adding 'scikit_bio-0.6.1.dist-info/top_level.txt'
2024-06-18T18:23:35,966   adding 'scikit_bio-0.6.1.dist-info/RECORD'
2024-06-18T18:23:36,017   removing build/bdist.linux-armv7l/wheel
2024-06-18T18:23:37,124   Building wheel for scikit-bio (pyproject.toml): finished with status 'done'
2024-06-18T18:23:37,209   Created wheel for scikit-bio: filename=scikit_bio-0.6.1-cp39-cp39-linux_armv7l.whl size=3950509 sha256=e98311cac990697fccc80b97b64ba1e25c17216e95f4ae0608c3c4084a25739d
2024-06-18T18:23:37,210   Stored in directory: /tmp/pip-ephem-wheel-cache-ynmfinyf/wheels/55/05/77/54b848bae904059762b8dc48e496bb682ee210c3cd27cf5633
2024-06-18T18:23:37,246 Successfully built scikit-bio
2024-06-18T18:23:37,340 Removed build tracker: '/tmp/pip-build-tracker-772hsuz4'