2024-06-20T11:16:43,660 Created temporary directory: /tmp/pip-build-tracker-4tb5v3zt 2024-06-20T11:16:43,661 Initialized build tracking at /tmp/pip-build-tracker-4tb5v3zt 2024-06-20T11:16:43,662 Created build tracker: /tmp/pip-build-tracker-4tb5v3zt 2024-06-20T11:16:43,662 Entered build tracker: /tmp/pip-build-tracker-4tb5v3zt 2024-06-20T11:16:43,663 Created temporary directory: /tmp/pip-wheel-9km3reli 2024-06-20T11:16:43,666 Created temporary directory: /tmp/pip-ephem-wheel-cache-x4e4l4yi 2024-06-20T11:16:43,690 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-20T11:16:43,694 2 location(s) to search for versions of biocrnpyler: 2024-06-20T11:16:43,694 * https://pypi.org/simple/biocrnpyler/ 2024-06-20T11:16:43,694 * https://www.piwheels.org/simple/biocrnpyler/ 2024-06-20T11:16:43,694 Fetching project page and analyzing links: https://pypi.org/simple/biocrnpyler/ 2024-06-20T11:16:43,695 Getting page https://pypi.org/simple/biocrnpyler/ 2024-06-20T11:16:43,697 Found index url https://pypi.org/simple/ 2024-06-20T11:16:43,906 Fetched page https://pypi.org/simple/biocrnpyler/ as application/vnd.pypi.simple.v1+json 2024-06-20T11:16:43,910 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/74/c5/c69a48c20fab9216636459162765dd62a37b27124d860cb219a9d655d17c/biocrnpyler-0.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) 2024-06-20T11:16:43,911 Found link https://files.pythonhosted.org/packages/04/c5/1593a3ff59408f817d14558560548819ea2974d4a91cdcc53221e67ccdbb/biocrnpyler-0.2.1.tar.gz (from https://pypi.org/simple/biocrnpyler/), version: 0.2.1 2024-06-20T11:16:43,912 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/52/78/452ff0bf2f74c8fbbfb245ba734582788c39c7e4c1bfeb39b360ec64aa74/biocrnpyler-0.9.0-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,913 Found link https://files.pythonhosted.org/packages/76/db/6b2afcd9cf0d0048e319ed9dd4e66293549432888f5d3aabe31308153269/biocrnpyler-0.9.0.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 0.9.0 2024-06-20T11:16:43,913 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/df/55/5744a0e0283442e25455fa2c403b50c17da9de95fd61a7c85482b4e3c407/biocrnpyler-0.9.1-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,914 Found link https://files.pythonhosted.org/packages/b1/40/6a656809796e64eba9b1ee98e046f1207ba12835a2a4ca39c1ea23c17109/biocrnpyler-0.9.1.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 0.9.1 2024-06-20T11:16:43,915 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/5a/90/5f83775a02a1fde1c165a85dfb5613e5f040067db43e1e1c0054fac6b300/biocrnpyler-1.0.0-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,916 Found link https://files.pythonhosted.org/packages/c0/42/1a3c366a975f31893970ab8f5e1a741018ad48f0324277857fe5831770e9/biocrnpyler-1.0.0.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.0.0 2024-06-20T11:16:43,917 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/6d/09/012b6438551b292e85f4f9fb1a7c7097289b9c2c045a287f94f4bc2a7ef8/biocrnpyler-1.0.1-py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,918 Found link https://files.pythonhosted.org/packages/e0/d3/d16c2298c7652005bc17c979709b9f1366e06a3ad2d102daf1f5f29decdf/biocrnpyler-1.0.1.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.0.1 2024-06-20T11:16:43,919 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/29/f8/7a815213ae88b472146118e3072626ae43addecfa4381ab421e4cf9a6113/biocrnpyler-1.0.2-py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,920 Found link https://files.pythonhosted.org/packages/fa/b1/e3df7578af91cd6d2f5f1929002bf88bb8808e63c23665fdc2e1542d0e30/biocrnpyler-1.0.2.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.0.2 2024-06-20T11:16:43,921 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/45/63/485330cb3d74f3eb681ec8aa2d2673272d0c5cdda34f3245eb2701e6f9df/biocrnpyler-1.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,921 Found link https://files.pythonhosted.org/packages/29/59/3b9ee5d12e07f1da74acde204d44d70a71d48c2fa280ae44ef2d1b1d2700/biocrnpyler-1.1.0.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.1.0 2024-06-20T11:16:43,922 Found link https://files.pythonhosted.org/packages/e3/93/54f6e46ff9e0a80cd37419b604c053a2bdec475bb8a657bd17c0afec9586/biocrnpyler-1.1.1.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.1.1 2024-06-20T11:16:43,923 Skipping link: No binaries permitted for biocrnpyler: https://files.pythonhosted.org/packages/b7/13/76acf265ab8b1ae6cf586a8300f65e6e4f54ae84035ed50ed283599a59fb/BioCRNpyler-1.1.2-py2.py3-none-any.whl (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:43,924 Found link https://files.pythonhosted.org/packages/c3/a0/fa7d5950f916424deab94d62bc31afdb4ccee945ec057c58de3215b8b53d/biocrnpyler-1.1.2.tar.gz (from https://pypi.org/simple/biocrnpyler/) (requires-python:>=3.6), version: 1.1.2 2024-06-20T11:16:43,924 Fetching project page and analyzing links: https://www.piwheels.org/simple/biocrnpyler/ 2024-06-20T11:16:43,925 Getting page https://www.piwheels.org/simple/biocrnpyler/ 2024-06-20T11:16:43,926 Found index url https://www.piwheels.org/simple/ 2024-06-20T11:16:44,080 Fetched page https://www.piwheels.org/simple/biocrnpyler/ as text/html 2024-06-20T11:16:44,084 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-1.1.1-py3-none-any.whl#sha256=046cc305064adaab99872e87c1734da263c37d1c339384a19777903345bb251f (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,084 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-1.1.0-py2.py3-none-any.whl#sha256=4d6c3ace4592852db95efcf26baa9d4c5df02011d6e33ace41eb455c1450a572 (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,085 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-1.0.2-py3-none-any.whl#sha256=b7dd195ed45768ba808d9146c7e0d76e7c81e8592f3195747bfbbd7acf93240c (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,086 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-1.0.1-py3-none-any.whl#sha256=3c58b73bbedd7a31ca8fc75c404e4a3ae791f0c8e57be4ca6e21f053e2b001f8 (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,086 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-1.0.0-py3-none-any.whl#sha256=749f80ed881f1401a66d7284951c622acd745a785c23581e1ffc77eae924e297 (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,087 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-0.9.1-py3-none-any.whl#sha256=df84549db800902f864bfca8064d50a106b2aa0064b694e7c4c9962dca109ca0 (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,087 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-0.9.0-py3-none-any.whl#sha256=be63ef674ea2fce5ee0a2e74674d615a9c34d5fe6c61bb1e942d9fa617cbf53e (from https://www.piwheels.org/simple/biocrnpyler/) (requires-python:>=3.6) 2024-06-20T11:16:44,088 Skipping link: No binaries permitted for biocrnpyler: https://www.piwheels.org/simple/biocrnpyler/biocrnpyler-0.2.1-py3-none-any.whl#sha256=120d75a8907d9ef98fe2306aa778963b388af1b2bb127a89274414cf7ccc037e (from https://www.piwheels.org/simple/biocrnpyler/) 2024-06-20T11:16:44,089 Skipping link: not a file: https://www.piwheels.org/simple/biocrnpyler/ 2024-06-20T11:16:44,089 Skipping link: not a file: https://pypi.org/simple/biocrnpyler/ 2024-06-20T11:16:44,109 Given no hashes to check 1 links for project 'biocrnpyler': discarding no candidates 2024-06-20T11:16:44,126 Collecting biocrnpyler==1.1.2 2024-06-20T11:16:44,129 Created temporary directory: /tmp/pip-unpack-k0mloy4i 2024-06-20T11:16:44,336 Downloading biocrnpyler-1.1.2.tar.gz (124 kB) 2024-06-20T11:16:44,518 Added biocrnpyler==1.1.2 from https://files.pythonhosted.org/packages/c3/a0/fa7d5950f916424deab94d62bc31afdb4ccee945ec057c58de3215b8b53d/biocrnpyler-1.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-4tb5v3zt' 2024-06-20T11:16:44,523 Created temporary directory: /tmp/pip-build-env-zch3dv8b 2024-06-20T11:16:44,527 Installing build dependencies: started 2024-06-20T11:16:44,528 Running command pip subprocess to install build dependencies 2024-06-20T11:16:45,661 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-06-20T11:16:46,158 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-20T11:16:47,589 Collecting setuptools>=64 2024-06-20T11:16:47,604 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.0-py3-none-any.whl (882 kB) 2024-06-20T11:16:47,825 Collecting wheel 2024-06-20T11:16:47,838 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-06-20T11:16:50,475 Installing collected packages: wheel, setuptools 2024-06-20T11:16:50,700 Creating /tmp/pip-build-env-zch3dv8b/overlay/local/bin 2024-06-20T11:16:50,703 changing mode of /tmp/pip-build-env-zch3dv8b/overlay/local/bin/wheel to 755 2024-06-20T11:16:53,112 Successfully installed setuptools-70.1.0 wheel-0.43.0 2024-06-20T11:16:53,666 Installing build dependencies: finished with status 'done' 2024-06-20T11:16:53,669 Getting requirements to build wheel: started 2024-06-20T11:16:53,671 Running command Getting requirements to build wheel 2024-06-20T11:16:54,262 Getting requirements to build wheel: finished with status 'done' 2024-06-20T11:16:54,271 Installing backend dependencies: started 2024-06-20T11:16:54,272 Running command pip subprocess to install backend dependencies 2024-06-20T11:16:55,409 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-06-20T11:16:55,898 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-20T11:16:56,312 Collecting pytest-runner 2024-06-20T11:16:56,330 Using cached https://www.piwheels.org/simple/pytest-runner/pytest_runner-6.0.1-py3-none-any.whl (7.2 kB) 2024-06-20T11:16:58,715 Installing collected packages: pytest-runner 2024-06-20T11:16:58,750 Successfully installed pytest-runner-6.0.1 2024-06-20T11:16:59,265 Installing backend dependencies: finished with status 'done' 2024-06-20T11:16:59,267 Created temporary directory: /tmp/pip-modern-metadata-p4u9oi4m 2024-06-20T11:16:59,269 Preparing metadata (pyproject.toml): started 2024-06-20T11:16:59,270 Running command Preparing metadata (pyproject.toml) 2024-06-20T11:16:59,800 /tmp/pip-build-env-zch3dv8b/overlay/local/lib/python3.11/dist-packages/setuptools/config/pyprojecttoml.py:70: _ExperimentalConfiguration: `[tool.distutils]` in `pyproject.toml` is still *experimental* and likely to change in future releases. 2024-06-20T11:16:59,801 config = read_configuration(filepath, True, ignore_option_errors, dist) 2024-06-20T11:16:59,825 /tmp/pip-build-env-zch3dv8b/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:79: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-06-20T11:16:59,825 corresp(dist, value, root_dir) 2024-06-20T11:17:00,099 running dist_info 2024-06-20T11:17:00,104 creating /tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info 2024-06-20T11:17:00,109 writing /tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/PKG-INFO 2024-06-20T11:17:00,116 writing dependency_links to /tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/dependency_links.txt 2024-06-20T11:17:00,119 writing requirements to /tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/requires.txt 2024-06-20T11:17:00,120 writing top-level names to /tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/top_level.txt 2024-06-20T11:17:00,121 writing manifest file '/tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/SOURCES.txt' 2024-06-20T11:17:00,139 reading manifest file '/tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/SOURCES.txt' 2024-06-20T11:17:00,141 reading manifest template 'MANIFEST.in' 2024-06-20T11:17:00,143 warning: no previously-included files found matching 'biocrnpyler.egg-info/*' 2024-06-20T11:17:00,143 adding license file 'LICENSE' 2024-06-20T11:17:00,146 writing manifest file '/tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler.egg-info/SOURCES.txt' 2024-06-20T11:17:00,147 creating '/tmp/pip-modern-metadata-p4u9oi4m/BioCRNpyler-1.1.2.dist-info' 2024-06-20T11:17:00,295 Preparing metadata (pyproject.toml): finished with status 'done' 2024-06-20T11:17:00,300 Source in /tmp/pip-wheel-9km3reli/biocrnpyler_62eaab9d21184f61a3e791936b7f2626 has version 1.1.2, which satisfies requirement biocrnpyler==1.1.2 from https://files.pythonhosted.org/packages/c3/a0/fa7d5950f916424deab94d62bc31afdb4ccee945ec057c58de3215b8b53d/biocrnpyler-1.1.2.tar.gz 2024-06-20T11:17:00,301 Removed biocrnpyler==1.1.2 from https://files.pythonhosted.org/packages/c3/a0/fa7d5950f916424deab94d62bc31afdb4ccee945ec057c58de3215b8b53d/biocrnpyler-1.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-4tb5v3zt' 2024-06-20T11:17:00,308 Created temporary directory: /tmp/pip-unpack-ejwrwsez 2024-06-20T11:17:00,308 Created temporary directory: /tmp/pip-unpack-m65fn5ma 2024-06-20T11:17:00,349 Building wheels for collected packages: biocrnpyler 2024-06-20T11:17:00,354 Created temporary directory: /tmp/pip-wheel-bgc4vle9 2024-06-20T11:17:00,354 Destination directory: /tmp/pip-wheel-bgc4vle9 2024-06-20T11:17:00,357 Building wheel for biocrnpyler (pyproject.toml): started 2024-06-20T11:17:00,358 Running command Building wheel for biocrnpyler (pyproject.toml) 2024-06-20T11:17:00,862 /tmp/pip-build-env-zch3dv8b/overlay/local/lib/python3.11/dist-packages/setuptools/config/pyprojecttoml.py:70: _ExperimentalConfiguration: `[tool.distutils]` in `pyproject.toml` is still *experimental* and likely to change in future releases. 2024-06-20T11:17:00,862 config = read_configuration(filepath, True, ignore_option_errors, dist) 2024-06-20T11:17:00,883 /tmp/pip-build-env-zch3dv8b/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:79: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-06-20T11:17:00,884 corresp(dist, value, root_dir) 2024-06-20T11:17:01,133 running bdist_wheel 2024-06-20T11:17:01,153 running build 2024-06-20T11:17:01,153 running build_py 2024-06-20T11:17:01,159 creating build 2024-06-20T11:17:01,160 creating build/lib 2024-06-20T11:17:01,160 creating build/lib/biocrnpyler 2024-06-20T11:17:01,162 copying biocrnpyler/sbmlutil.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,164 copying biocrnpyler/compartments.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,166 copying biocrnpyler/dna_part_cds.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,168 copying biocrnpyler/propensities.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,170 copying biocrnpyler/dna_part_misc.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,172 copying biocrnpyler/dna_part_rbs.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,174 copying biocrnpyler/mechanisms_txtl.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,177 copying biocrnpyler/integrase_enumerator.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,180 copying biocrnpyler/component_enumerator.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,181 copying biocrnpyler/component.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,183 copying biocrnpyler/mechanism.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,185 copying biocrnpyler/mixture.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,187 copying biocrnpyler/utils.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,190 copying biocrnpyler/mechanisms_metabolite.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,191 copying biocrnpyler/mechanisms_integrase.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,193 copying biocrnpyler/units.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,195 copying biocrnpyler/mechanisms_binding.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,197 copying biocrnpyler/mechanisms_conformation.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,199 copying biocrnpyler/dna_construct.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,202 copying biocrnpyler/components_combinatorial_conformation.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,204 copying biocrnpyler/chemical_reaction_network.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,207 copying biocrnpyler/species.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,209 copying biocrnpyler/mechanisms_enzyme.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,212 copying biocrnpyler/__init__.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,213 copying biocrnpyler/construct_explorer.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,216 copying biocrnpyler/parameter.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,218 copying biocrnpyler/reaction.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,221 copying biocrnpyler/mixtures_extract.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,223 copying biocrnpyler/mixtures_cell.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,225 copying biocrnpyler/dna_part.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,227 copying biocrnpyler/dna_part_terminator.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,229 copying biocrnpyler/polymer.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,231 copying biocrnpyler/dna_assembly.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,234 copying biocrnpyler/plotting.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,237 copying biocrnpyler/components_basic.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,240 copying biocrnpyler/components_combinatorial_complex.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,242 copying biocrnpyler/dna_part_promoter.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,245 copying biocrnpyler/global_mechanism.py -> build/lib/biocrnpyler 2024-06-20T11:17:01,247 running egg_info 2024-06-20T11:17:01,251 writing BioCRNpyler.egg-info/PKG-INFO 2024-06-20T11:17:01,258 writing dependency_links to BioCRNpyler.egg-info/dependency_links.txt 2024-06-20T11:17:01,262 writing requirements to BioCRNpyler.egg-info/requires.txt 2024-06-20T11:17:01,263 writing top-level names to BioCRNpyler.egg-info/top_level.txt 2024-06-20T11:17:01,273 reading manifest file 'BioCRNpyler.egg-info/SOURCES.txt' 2024-06-20T11:17:01,275 reading manifest template 'MANIFEST.in' 2024-06-20T11:17:01,277 warning: no previously-included files found matching 'biocrnpyler.egg-info/*' 2024-06-20T11:17:01,278 adding license file 'LICENSE' 2024-06-20T11:17:01,281 writing manifest file 'BioCRNpyler.egg-info/SOURCES.txt' 2024-06-20T11:17:01,292 installing to build/bdist.linux-armv7l/wheel 2024-06-20T11:17:01,293 running install 2024-06-20T11:17:01,317 running install_lib 2024-06-20T11:17:01,322 creating build/bdist.linux-armv7l 2024-06-20T11:17:01,323 creating build/bdist.linux-armv7l/wheel 2024-06-20T11:17:01,325 creating build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,326 copying build/lib/biocrnpyler/sbmlutil.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,329 copying build/lib/biocrnpyler/compartments.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,331 copying build/lib/biocrnpyler/dna_part_cds.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,333 copying build/lib/biocrnpyler/propensities.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,336 copying build/lib/biocrnpyler/dna_part_misc.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,338 copying build/lib/biocrnpyler/dna_part_rbs.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,341 copying build/lib/biocrnpyler/mechanisms_txtl.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,343 copying build/lib/biocrnpyler/integrase_enumerator.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,346 copying build/lib/biocrnpyler/component_enumerator.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,348 copying build/lib/biocrnpyler/component.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,350 copying build/lib/biocrnpyler/mechanism.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,352 copying build/lib/biocrnpyler/mixture.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,355 copying build/lib/biocrnpyler/utils.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,357 copying build/lib/biocrnpyler/mechanisms_metabolite.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,359 copying build/lib/biocrnpyler/mechanisms_integrase.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,361 copying build/lib/biocrnpyler/units.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,363 copying build/lib/biocrnpyler/mechanisms_binding.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,365 copying build/lib/biocrnpyler/mechanisms_conformation.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,367 copying build/lib/biocrnpyler/dna_construct.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,370 copying build/lib/biocrnpyler/components_combinatorial_conformation.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,373 copying build/lib/biocrnpyler/chemical_reaction_network.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,376 copying build/lib/biocrnpyler/species.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,379 copying build/lib/biocrnpyler/mechanisms_enzyme.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,381 copying build/lib/biocrnpyler/__init__.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,383 copying build/lib/biocrnpyler/construct_explorer.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,386 copying build/lib/biocrnpyler/parameter.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,388 copying build/lib/biocrnpyler/reaction.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,391 copying build/lib/biocrnpyler/mixtures_extract.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,393 copying build/lib/biocrnpyler/mixtures_cell.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,395 copying build/lib/biocrnpyler/dna_part.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,398 copying build/lib/biocrnpyler/dna_part_terminator.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,399 copying build/lib/biocrnpyler/polymer.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,402 copying build/lib/biocrnpyler/dna_assembly.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,404 copying build/lib/biocrnpyler/plotting.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,407 copying build/lib/biocrnpyler/components_basic.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,409 copying build/lib/biocrnpyler/components_combinatorial_complex.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,412 copying build/lib/biocrnpyler/dna_part_promoter.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,414 copying build/lib/biocrnpyler/global_mechanism.py -> build/bdist.linux-armv7l/wheel/biocrnpyler 2024-06-20T11:17:01,416 running install_egg_info 2024-06-20T11:17:01,421 Copying BioCRNpyler.egg-info to build/bdist.linux-armv7l/wheel/BioCRNpyler-1.1.2-py3.11.egg-info 2024-06-20T11:17:01,430 running install_scripts 2024-06-20T11:17:01,448 creating build/bdist.linux-armv7l/wheel/BioCRNpyler-1.1.2.dist-info/WHEEL 2024-06-20T11:17:01,450 creating '/tmp/pip-wheel-bgc4vle9/.tmp-w2c5ve9s/BioCRNpyler-1.1.2-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-20T11:17:01,454 adding 'biocrnpyler/__init__.py' 2024-06-20T11:17:01,456 adding 'biocrnpyler/chemical_reaction_network.py' 2024-06-20T11:17:01,458 adding 'biocrnpyler/compartments.py' 2024-06-20T11:17:01,460 adding 'biocrnpyler/component.py' 2024-06-20T11:17:01,461 adding 'biocrnpyler/component_enumerator.py' 2024-06-20T11:17:01,463 adding 'biocrnpyler/components_basic.py' 2024-06-20T11:17:01,467 adding 'biocrnpyler/components_combinatorial_complex.py' 2024-06-20T11:17:01,470 adding 'biocrnpyler/components_combinatorial_conformation.py' 2024-06-20T11:17:01,472 adding 'biocrnpyler/construct_explorer.py' 2024-06-20T11:17:01,474 adding 'biocrnpyler/dna_assembly.py' 2024-06-20T11:17:01,478 adding 'biocrnpyler/dna_construct.py' 2024-06-20T11:17:01,480 adding 'biocrnpyler/dna_part.py' 2024-06-20T11:17:01,481 adding 'biocrnpyler/dna_part_cds.py' 2024-06-20T11:17:01,483 adding 'biocrnpyler/dna_part_misc.py' 2024-06-20T11:17:01,485 adding 'biocrnpyler/dna_part_promoter.py' 2024-06-20T11:17:01,487 adding 'biocrnpyler/dna_part_rbs.py' 2024-06-20T11:17:01,488 adding 'biocrnpyler/dna_part_terminator.py' 2024-06-20T11:17:01,490 adding 'biocrnpyler/global_mechanism.py' 2024-06-20T11:17:01,494 adding 'biocrnpyler/integrase_enumerator.py' 2024-06-20T11:17:01,496 adding 'biocrnpyler/mechanism.py' 2024-06-20T11:17:01,498 adding 'biocrnpyler/mechanisms_binding.py' 2024-06-20T11:17:01,499 adding 'biocrnpyler/mechanisms_conformation.py' 2024-06-20T11:17:01,501 adding 'biocrnpyler/mechanisms_enzyme.py' 2024-06-20T11:17:01,502 adding 'biocrnpyler/mechanisms_integrase.py' 2024-06-20T11:17:01,503 adding 'biocrnpyler/mechanisms_metabolite.py' 2024-06-20T11:17:01,506 adding 'biocrnpyler/mechanisms_txtl.py' 2024-06-20T11:17:01,509 adding 'biocrnpyler/mixture.py' 2024-06-20T11:17:01,511 adding 'biocrnpyler/mixtures_cell.py' 2024-06-20T11:17:01,512 adding 'biocrnpyler/mixtures_extract.py' 2024-06-20T11:17:01,516 adding 'biocrnpyler/parameter.py' 2024-06-20T11:17:01,521 adding 'biocrnpyler/plotting.py' 2024-06-20T11:17:01,523 adding 'biocrnpyler/polymer.py' 2024-06-20T11:17:01,526 adding 'biocrnpyler/propensities.py' 2024-06-20T11:17:01,528 adding 'biocrnpyler/reaction.py' 2024-06-20T11:17:01,531 adding 'biocrnpyler/sbmlutil.py' 2024-06-20T11:17:01,538 adding 'biocrnpyler/species.py' 2024-06-20T11:17:01,540 adding 'biocrnpyler/units.py' 2024-06-20T11:17:01,542 adding 'biocrnpyler/utils.py' 2024-06-20T11:17:01,543 adding 'BioCRNpyler-1.1.2.dist-info/LICENSE' 2024-06-20T11:17:01,544 adding 'BioCRNpyler-1.1.2.dist-info/METADATA' 2024-06-20T11:17:01,546 adding 'BioCRNpyler-1.1.2.dist-info/WHEEL' 2024-06-20T11:17:01,547 adding 'BioCRNpyler-1.1.2.dist-info/top_level.txt' 2024-06-20T11:17:01,548 adding 'BioCRNpyler-1.1.2.dist-info/RECORD' 2024-06-20T11:17:01,551 removing build/bdist.linux-armv7l/wheel 2024-06-20T11:17:01,682 Building wheel for biocrnpyler (pyproject.toml): finished with status 'done' 2024-06-20T11:17:01,689 Created wheel for biocrnpyler: filename=BioCRNpyler-1.1.2-py2.py3-none-any.whl size=140341 sha256=0d8a7c31a433864a5ce1a806ccc029508bba58c809c343221da86499b0c11491 2024-06-20T11:17:01,691 Stored in directory: /tmp/pip-ephem-wheel-cache-x4e4l4yi/wheels/6c/c8/14/42557503cd1d0ec14635be11981e72e3d8ca6a3e7b8df756d7 2024-06-20T11:17:01,705 Successfully built biocrnpyler 2024-06-20T11:17:01,713 Removed build tracker: '/tmp/pip-build-tracker-4tb5v3zt'