2024-06-20T15:36:38,002 Created temporary directory: /tmp/pip-build-tracker-73rt8me5 2024-06-20T15:36:38,003 Initialized build tracking at /tmp/pip-build-tracker-73rt8me5 2024-06-20T15:36:38,004 Created build tracker: /tmp/pip-build-tracker-73rt8me5 2024-06-20T15:36:38,004 Entered build tracker: /tmp/pip-build-tracker-73rt8me5 2024-06-20T15:36:38,005 Created temporary directory: /tmp/pip-wheel-ucm_ibp9 2024-06-20T15:36:38,008 Created temporary directory: /tmp/pip-ephem-wheel-cache-1tzo_bp_ 2024-06-20T15:36:38,030 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-20T15:36:38,033 2 location(s) to search for versions of biomero: 2024-06-20T15:36:38,033 * https://pypi.org/simple/biomero/ 2024-06-20T15:36:38,033 * https://www.piwheels.org/simple/biomero/ 2024-06-20T15:36:38,034 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-06-20T15:36:38,035 Getting page https://pypi.org/simple/biomero/ 2024-06-20T15:36:38,036 Found index url https://pypi.org/simple/ 2024-06-20T15:36:38,250 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-06-20T15:36:38,257 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,258 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-06-20T15:36:38,259 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,260 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-06-20T15:36:38,260 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,261 Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0 2024-06-20T15:36:38,262 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,263 Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0 2024-06-20T15:36:38,264 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,265 Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1 2024-06-20T15:36:38,265 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,266 Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0 2024-06-20T15:36:38,267 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,268 Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0 2024-06-20T15:36:38,269 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/f4/ca212a8abbb68d2c32d48cab43cf6fe1622a5317a4e4300154dafe9b9862/biomero-1.7.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,269 Found link https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.1 2024-06-20T15:36:38,270 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/21/d9/c167814a1abc31271e77ad77422f04554cd41b18f62572e12c4f57e0d446/biomero-1.8.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,271 Found link https://files.pythonhosted.org/packages/c4/f3/5e41f475114acc86b9c5fc20fe702136efe2cfd9a93d877db1b6dd619297/biomero-1.8.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.8.0 2024-06-20T15:36:38,271 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/2b/97/0854245dad0152c2df83582e7802735b6c46e4ee97aaefa0252ee23af76c/biomero-1.9.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,272 Found link https://files.pythonhosted.org/packages/22/4f/1ad8dbbd2c2c569ce42ef22e424c10267f8af17ef0179fecc18dfaceb367/biomero-1.9.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.0 2024-06-20T15:36:38,273 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/38/23/7a5ce5588c26a7a8fd6da2a6dfd96b002cae0d52648df25c5e4526e0b84c/biomero-1.9.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,274 Found link https://files.pythonhosted.org/packages/6d/6b/d8bec19f77accd9ea2a90b990bd0aceba02de375751a8acc5a690a1d816a/biomero-1.9.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.9.1 2024-06-20T15:36:38,274 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/5b/7f/35fdc1e2d4e84550a0cccaa9cac65a36da0b51857726558507f440a10a72/biomero-1.10.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,275 Found link https://files.pythonhosted.org/packages/61/63/84b5affaf188280568084e9ed7f78f2c30920331bc31990353140689292b/biomero-1.10.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.10.0 2024-06-20T15:36:38,276 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/1b/9e/0f43d61d43ab23b5da467fa52102764d3c5d5c72dcc0aeaae04458f79337/biomero-1.11.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,277 Found link https://files.pythonhosted.org/packages/52/d1/0f602729cdfdda7325065e2b60eb2a357385de692aa4274569e5b04aae57/biomero-1.11.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.11.0 2024-06-20T15:36:38,278 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/80/33394f2d48314704be0ab054ddc7b5ffc9d3af6a4d1c1183881ad7def85c/biomero-1.12.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,278 Found link https://files.pythonhosted.org/packages/2b/bc/76419c54de3288560f410f4469990f18cccac71957f881b357b703c01520/biomero-1.12.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.12.0 2024-06-20T15:36:38,279 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/d7/ca/a4fb10933144426cb0c353a8ab2aa49d86ad4f3832182dc49999405ddfac/biomero-1.13.0a0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,280 Found link https://files.pythonhosted.org/packages/e8/e6/1ed470d252aa8a6de569cf0360388c6079dbdd1ddc62baacd4675bd4c045/biomero-1.13.0a0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.13.0a0 2024-06-20T15:36:38,281 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/90/ba/b7c11b24b23e6081a5edc96300f073d6a5f83635dd81c31152599cf91ee7/biomero-1.13.0a1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,281 Found link https://files.pythonhosted.org/packages/71/04/488cf7c44bd1d76fc7a0730685711ad5eb4eee712a3175e14f92e353a10d/biomero-1.13.0a1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.13.0a1 2024-06-20T15:36:38,282 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ad/c6/7fbee9b5a9a13289f116359942f90daf7aaac76aa801d0ae6187ffccf407/biomero-1.13.0a2-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,283 Found link https://files.pythonhosted.org/packages/bd/ba/c98d5a668e5a8861236e0057070fd2278d0046648e245a084f69d106f61a/biomero-1.13.0a2.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.13.0a2 2024-06-20T15:36:38,283 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/94/8a/d7425ffe1c1a0d55bb31761cef56ff86de084fd1a287f275cf51b7e48cad/biomero-1.13.0a3-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,284 Found link https://files.pythonhosted.org/packages/e6/56/0b6c970fb13fe6d73764f17dc5be485b74218933ad46b529791e5d50bfdc/biomero-1.13.0a3.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.13.0a3 2024-06-20T15:36:38,285 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-06-20T15:36:38,286 Getting page https://www.piwheels.org/simple/biomero/ 2024-06-20T15:36:38,287 Found index url https://www.piwheels.org/simple/ 2024-06-20T15:36:38,450 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-06-20T15:36:38,456 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.13.0a2-py3-none-any.whl#sha256=dac3a448c4e13cbfa9de95eaa59a8fa60967da3bcc31858d6abd4c55e8aeb8a1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,457 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.13.0a1-py3-none-any.whl#sha256=99a7f6b3e2605a2c519053f66f11f208f45587e4c4c50a763b99224068d03341 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,458 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.13.0a0-py3-none-any.whl#sha256=5a3ecd5d406d3df3c647dff1788fe445e6522116ff5780bb42164ac20997d426 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,458 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.12.0-py3-none-any.whl#sha256=44383523b887fe362fdf8d39f6fb26075a82cd1abbfc4165284629463333742e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,459 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.11.0-py3-none-any.whl#sha256=708af5176c818ccdadc0403f4584a53487f49346ae5de6c46343637b971637e5 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,459 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.10.0-py3-none-any.whl#sha256=686f8597edcf9f3aada4fc0833d1f0b9cf8cbd5f37fa2ff1f25714933a2b3692 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,460 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.1-py3-none-any.whl#sha256=4ac212ff38e26184afd600913e8895efd3480866ea109645285bd8602f184280 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,461 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.9.0-py3-none-any.whl#sha256=d7b46dbddbc02213c8058fff735666ca242165070470776408d141210b02cc6b (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,461 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.8.0-py3-none-any.whl#sha256=823968c9fd9c97aa196bb2d2b94d85245d2163842ba800ea938a1fdeb7be8b74 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,461 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.1-py3-none-any.whl#sha256=d2aec9750cfab56583a01cbd08b734569956b5d4a5a0c524e6b57bc8d76338b4 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,462 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.0-py3-none-any.whl#sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,462 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,463 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,463 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,464 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,465 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,466 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-06-20T15:36:38,466 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-06-20T15:36:38,467 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-06-20T15:36:38,487 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-06-20T15:36:38,505 Collecting biomero==1.13.0a3 2024-06-20T15:36:38,507 Created temporary directory: /tmp/pip-unpack-9kfjrp_u 2024-06-20T15:36:38,729 Downloading biomero-1.13.0a3.tar.gz (1.1 MB) 2024-06-20T15:36:39,033 Added biomero==1.13.0a3 from https://files.pythonhosted.org/packages/e6/56/0b6c970fb13fe6d73764f17dc5be485b74218933ad46b529791e5d50bfdc/biomero-1.13.0a3.tar.gz to build tracker '/tmp/pip-build-tracker-73rt8me5' 2024-06-20T15:36:39,039 Created temporary directory: /tmp/pip-build-env-rfzck66e 2024-06-20T15:36:39,044 Installing build dependencies: started 2024-06-20T15:36:39,045 Running command pip subprocess to install build dependencies 2024-06-20T15:36:40,169 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-06-20T15:36:40,692 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-20T15:36:42,183 Collecting setuptools>=45 2024-06-20T15:36:42,198 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.0-py3-none-any.whl (882 kB) 2024-06-20T15:36:42,516 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-06-20T15:36:42,533 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-06-20T15:36:42,856 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-06-20T15:36:42,869 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-06-20T15:36:45,440 Installing collected packages: setuptools, packaging, setuptools_scm 2024-06-20T15:36:48,488 Successfully installed packaging-24.1 setuptools-70.1.0 setuptools_scm-8.1.0 2024-06-20T15:36:49,113 Installing build dependencies: finished with status 'done' 2024-06-20T15:36:49,116 Getting requirements to build wheel: started 2024-06-20T15:36:49,118 Running command Getting requirements to build wheel 2024-06-20T15:36:49,986 running egg_info 2024-06-20T15:36:49,991 writing biomero.egg-info/PKG-INFO 2024-06-20T15:36:49,997 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-06-20T15:36:50,000 writing requirements to biomero.egg-info/requires.txt 2024-06-20T15:36:50,001 writing top-level names to biomero.egg-info/top_level.txt 2024-06-20T15:36:50,043 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-20T15:36:50,047 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:50,050 reading manifest template 'MANIFEST.in' 2024-06-20T15:36:50,059 adding license file 'LICENSE' 2024-06-20T15:36:50,062 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:50,183 Getting requirements to build wheel: finished with status 'done' 2024-06-20T15:36:50,187 Created temporary directory: /tmp/pip-modern-metadata-9qjefx_p 2024-06-20T15:36:50,190 Preparing metadata (pyproject.toml): started 2024-06-20T15:36:50,191 Running command Preparing metadata (pyproject.toml) 2024-06-20T15:36:50,997 running dist_info 2024-06-20T15:36:51,003 creating /tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info 2024-06-20T15:36:51,008 writing /tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/PKG-INFO 2024-06-20T15:36:51,013 writing dependency_links to /tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/dependency_links.txt 2024-06-20T15:36:51,015 writing requirements to /tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/requires.txt 2024-06-20T15:36:51,016 writing top-level names to /tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/top_level.txt 2024-06-20T15:36:51,018 writing manifest file '/tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:51,055 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-20T15:36:51,058 reading manifest file '/tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:51,060 reading manifest template 'MANIFEST.in' 2024-06-20T15:36:51,069 adding license file 'LICENSE' 2024-06-20T15:36:51,072 writing manifest file '/tmp/pip-modern-metadata-9qjefx_p/biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:51,073 creating '/tmp/pip-modern-metadata-9qjefx_p/biomero-1.13.0a3.dist-info' 2024-06-20T15:36:51,227 Preparing metadata (pyproject.toml): finished with status 'done' 2024-06-20T15:36:51,236 Source in /tmp/pip-wheel-ucm_ibp9/biomero_4f788c4596c24c0d83c74fde634dd014 has version 1.13.0a3, which satisfies requirement biomero==1.13.0a3 from https://files.pythonhosted.org/packages/e6/56/0b6c970fb13fe6d73764f17dc5be485b74218933ad46b529791e5d50bfdc/biomero-1.13.0a3.tar.gz 2024-06-20T15:36:51,237 Removed biomero==1.13.0a3 from https://files.pythonhosted.org/packages/e6/56/0b6c970fb13fe6d73764f17dc5be485b74218933ad46b529791e5d50bfdc/biomero-1.13.0a3.tar.gz from build tracker '/tmp/pip-build-tracker-73rt8me5' 2024-06-20T15:36:51,249 Created temporary directory: /tmp/pip-unpack-zfryknme 2024-06-20T15:36:51,250 Created temporary directory: /tmp/pip-unpack-ftdz_l6l 2024-06-20T15:36:51,270 Building wheels for collected packages: biomero 2024-06-20T15:36:51,274 Created temporary directory: /tmp/pip-wheel-dtkbe70r 2024-06-20T15:36:51,275 Destination directory: /tmp/pip-wheel-dtkbe70r 2024-06-20T15:36:51,277 Building wheel for biomero (pyproject.toml): started 2024-06-20T15:36:51,278 Running command Building wheel for biomero (pyproject.toml) 2024-06-20T15:36:52,058 running bdist_wheel 2024-06-20T15:36:52,078 running build 2024-06-20T15:36:52,079 running build_py 2024-06-20T15:36:52,084 creating build 2024-06-20T15:36:52,084 creating build/lib 2024-06-20T15:36:52,085 creating build/lib/biomero 2024-06-20T15:36:52,086 copying biomero/__init__.py -> build/lib/biomero 2024-06-20T15:36:52,088 copying biomero/constants.py -> build/lib/biomero 2024-06-20T15:36:52,090 copying biomero/slurm_client.py -> build/lib/biomero 2024-06-20T15:36:52,094 creating build/lib/resources 2024-06-20T15:36:52,095 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-06-20T15:36:52,097 copying resources/__init__.py -> build/lib/resources 2024-06-20T15:36:52,099 creating build/lib/docs 2024-06-20T15:36:52,100 copying docs/conf.py -> build/lib/docs 2024-06-20T15:36:52,103 creating build/lib/tests 2024-06-20T15:36:52,103 creating build/lib/tests/integration 2024-06-20T15:36:52,104 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-06-20T15:36:52,106 creating build/lib/tests/unit 2024-06-20T15:36:52,107 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-06-20T15:36:52,110 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-06-20T15:36:52,112 running egg_info 2024-06-20T15:36:52,116 writing biomero.egg-info/PKG-INFO 2024-06-20T15:36:52,121 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-06-20T15:36:52,123 writing requirements to biomero.egg-info/requires.txt 2024-06-20T15:36:52,124 writing top-level names to biomero.egg-info/top_level.txt 2024-06-20T15:36:52,153 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-20T15:36:52,156 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:52,158 reading manifest template 'MANIFEST.in' 2024-06-20T15:36:52,167 adding license file 'LICENSE' 2024-06-20T15:36:52,170 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-06-20T15:36:52,176 copying resources/convert_job_array.sh -> build/lib/resources 2024-06-20T15:36:52,179 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-06-20T15:36:52,180 copying resources/convert_zarr_to_tiff.dockerfile -> build/lib/resources 2024-06-20T15:36:52,182 copying resources/example.config -> build/lib/resources 2024-06-20T15:36:52,184 copying resources/job_template.sh -> build/lib/resources 2024-06-20T15:36:52,186 copying resources/pull_images.sh -> build/lib/resources 2024-06-20T15:36:52,188 copying resources/slurm-config.ini -> build/lib/resources 2024-06-20T15:36:52,191 copying docs/Makefile -> build/lib/docs 2024-06-20T15:36:52,192 copying docs/biomero.rst -> build/lib/docs 2024-06-20T15:36:52,194 copying docs/index.rst -> build/lib/docs 2024-06-20T15:36:52,196 copying docs/make.bat -> build/lib/docs 2024-06-20T15:36:52,198 copying docs/modules.rst -> build/lib/docs 2024-06-20T15:36:52,200 copying docs/readme_link.md -> build/lib/docs 2024-06-20T15:36:52,202 copying docs/requirements.txt -> build/lib/docs 2024-06-20T15:36:52,204 copying docs/tutorial_link.md -> build/lib/docs 2024-06-20T15:36:52,206 creating build/lib/resources/tutorials 2024-06-20T15:36:52,206 copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials 2024-06-20T15:36:52,209 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-06-20T15:36:52,212 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-06-20T15:36:52,214 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-06-20T15:36:52,217 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-06-20T15:36:52,219 creating build/lib/resources/tutorials/images 2024-06-20T15:36:52,220 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,227 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,235 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,238 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,244 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,247 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,250 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,252 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-06-20T15:36:52,266 installing to build/bdist.linux-armv7l/wheel 2024-06-20T15:36:52,266 running install 2024-06-20T15:36:52,291 running install_lib 2024-06-20T15:36:52,297 creating build/bdist.linux-armv7l 2024-06-20T15:36:52,297 creating build/bdist.linux-armv7l/wheel 2024-06-20T15:36:52,299 creating build/bdist.linux-armv7l/wheel/biomero 2024-06-20T15:36:52,300 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-20T15:36:52,302 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-20T15:36:52,304 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-06-20T15:36:52,308 creating build/bdist.linux-armv7l/wheel/tests 2024-06-20T15:36:52,309 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-06-20T15:36:52,310 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-06-20T15:36:52,312 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-06-20T15:36:52,313 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-06-20T15:36:52,316 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-06-20T15:36:52,318 creating build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,319 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,321 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,323 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,325 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,327 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,328 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,330 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,332 copying build/lib/resources/convert_zarr_to_tiff.dockerfile -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,334 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,335 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,336 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,339 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,346 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,349 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,352 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,355 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,361 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,364 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-06-20T15:36:52,371 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,374 copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,376 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,379 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,382 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-06-20T15:36:52,385 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-06-20T15:36:52,387 creating build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,388 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,391 copying build/lib/docs/biomero.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,392 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,395 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,396 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,398 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,400 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,402 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,404 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-06-20T15:36:52,406 running install_egg_info 2024-06-20T15:36:52,411 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.13.0a3-py3.11.egg-info 2024-06-20T15:36:52,422 running install_scripts 2024-06-20T15:36:52,441 creating build/bdist.linux-armv7l/wheel/biomero-1.13.0a3.dist-info/WHEEL 2024-06-20T15:36:52,444 creating '/tmp/pip-wheel-dtkbe70r/.tmp-q524gqpg/biomero-1.13.0a3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-20T15:36:52,447 adding 'biomero/__init__.py' 2024-06-20T15:36:52,449 adding 'biomero/constants.py' 2024-06-20T15:36:52,459 adding 'biomero/slurm_client.py' 2024-06-20T15:36:52,463 adding 'docs/Makefile' 2024-06-20T15:36:52,464 adding 'docs/biomero.rst' 2024-06-20T15:36:52,466 adding 'docs/conf.py' 2024-06-20T15:36:52,468 adding 'docs/index.rst' 2024-06-20T15:36:52,470 adding 'docs/make.bat' 2024-06-20T15:36:52,471 adding 'docs/modules.rst' 2024-06-20T15:36:52,473 adding 'docs/readme_link.md' 2024-06-20T15:36:52,474 adding 'docs/requirements.txt' 2024-06-20T15:36:52,475 adding 'docs/tutorial_link.md' 2024-06-20T15:36:52,478 adding 'resources/__init__.py' 2024-06-20T15:36:52,479 adding 'resources/convert_job_array.sh' 2024-06-20T15:36:52,481 adding 'resources/convert_zarr_to_tiff.def' 2024-06-20T15:36:52,482 adding 'resources/convert_zarr_to_tiff.dockerfile' 2024-06-20T15:36:52,484 adding 'resources/convert_zarr_to_tiff.py' 2024-06-20T15:36:52,485 adding 'resources/example.config' 2024-06-20T15:36:52,487 adding 'resources/job_template.sh' 2024-06-20T15:36:52,489 adding 'resources/pull_images.sh' 2024-06-20T15:36:52,491 adding 'resources/slurm-config.ini' 2024-06-20T15:36:52,495 adding 'resources/tutorials/tutorial_Azure_slurm.md' 2024-06-20T15:36:52,497 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-06-20T15:36:52,499 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-06-20T15:36:52,503 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-06-20T15:36:52,507 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-06-20T15:36:52,549 adding 'resources/tutorials/images/Cells.tif' 2024-06-20T15:36:52,589 adding 'resources/tutorials/images/cellexpansion.png' 2024-06-20T15:36:52,602 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-06-20T15:36:52,625 adding 'resources/tutorials/images/nuclei_labels.png' 2024-06-20T15:36:52,629 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-06-20T15:36:52,631 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-06-20T15:36:52,635 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-06-20T15:36:52,641 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-06-20T15:36:52,644 adding 'tests/integration/__init__.py' 2024-06-20T15:36:52,645 adding 'tests/unit/__init__.py' 2024-06-20T15:36:52,649 adding 'tests/unit/test_slurm_client.py' 2024-06-20T15:36:52,651 adding 'biomero-1.13.0a3.dist-info/LICENSE' 2024-06-20T15:36:52,659 adding 'biomero-1.13.0a3.dist-info/METADATA' 2024-06-20T15:36:52,660 adding 'biomero-1.13.0a3.dist-info/WHEEL' 2024-06-20T15:36:52,661 adding 'biomero-1.13.0a3.dist-info/top_level.txt' 2024-06-20T15:36:52,662 adding 'biomero-1.13.0a3.dist-info/RECORD' 2024-06-20T15:36:52,675 removing build/bdist.linux-armv7l/wheel 2024-06-20T15:36:52,810 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-06-20T15:36:52,835 Created wheel for biomero: filename=biomero-1.13.0a3-py3-none-any.whl size=1095101 sha256=97f751132719b6fdf44543533900557e689037c77036a3697991e7630a09d5d3 2024-06-20T15:36:52,836 Stored in directory: /tmp/pip-ephem-wheel-cache-1tzo_bp_/wheels/de/59/be/5885c4a305b4c4a4da29d4bce0e1aa1c54003ac960b50a4578 2024-06-20T15:36:52,870 Successfully built biomero 2024-06-20T15:36:52,919 Removed build tracker: '/tmp/pip-build-tracker-73rt8me5'