2024-06-20T16:38:45,582 Created temporary directory: /tmp/pip-build-tracker-v3nunv6p
2024-06-20T16:38:45,583 Initialized build tracking at /tmp/pip-build-tracker-v3nunv6p
2024-06-20T16:38:45,584 Created build tracker: /tmp/pip-build-tracker-v3nunv6p
2024-06-20T16:38:45,584 Entered build tracker: /tmp/pip-build-tracker-v3nunv6p
2024-06-20T16:38:45,584 Created temporary directory: /tmp/pip-wheel-8r8_uld4
2024-06-20T16:38:45,589 Created temporary directory: /tmp/pip-ephem-wheel-cache-2ci5oa3a
2024-06-20T16:38:45,613 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-20T16:38:45,616 2 location(s) to search for versions of vcf-subset:
2024-06-20T16:38:45,616 * https://pypi.org/simple/vcf-subset/
2024-06-20T16:38:45,616 * https://www.piwheels.org/simple/vcf-subset/
2024-06-20T16:38:45,617 Fetching project page and analyzing links: https://pypi.org/simple/vcf-subset/
2024-06-20T16:38:45,617 Getting page https://pypi.org/simple/vcf-subset/
2024-06-20T16:38:45,619 Found index url https://pypi.org/simple/
2024-06-20T16:38:45,670 Fetched page https://pypi.org/simple/vcf-subset/ as application/vnd.pypi.simple.v1+json
2024-06-20T16:38:45,672   Found link https://files.pythonhosted.org/packages/68/e0/a1fc01739e6486be8b1c8d66cd54056d2b0e2d55ec49686b0b086aa204ac/vcf_subset-1.0.0.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.0.0
2024-06-20T16:38:45,672   Found link https://files.pythonhosted.org/packages/e3/f0/fbedfe1b6255872b0ef4964143fd9f7c196fda57a7912dd025b7c7c6b67e/vcf_subset-1.1.0.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.1.0
2024-06-20T16:38:45,673   Found link https://files.pythonhosted.org/packages/12/28/79c29ab57444881a4c084f09007e6d43f6a2fe7dfe5aebe10d2a60b7ec85/vcf_subset-1.1.1.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.1.1
2024-06-20T16:38:45,673   Found link https://files.pythonhosted.org/packages/91/bd/3cd2ab10453113bc3d527bc2ea8da704fffc921c8f2264a5cc332485d078/vcf_subset-1.1.2.tar.gz (from https://pypi.org/simple/vcf-subset/) (requires-python:>=3.7), version: 1.1.2
2024-06-20T16:38:45,674 Fetching project page and analyzing links: https://www.piwheels.org/simple/vcf-subset/
2024-06-20T16:38:45,674 Getting page https://www.piwheels.org/simple/vcf-subset/
2024-06-20T16:38:45,675 Found index url https://www.piwheels.org/simple/
2024-06-20T16:38:45,750 Fetched page https://www.piwheels.org/simple/vcf-subset/ as text/html
2024-06-20T16:38:45,757   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.2-cp311-cp311-linux_armv6l.whl#sha256=8f7933e3ef9e63078d8a04b9b5f82a983e6c1786c837ee68208a78d4ee3db162 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,757   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.2-cp311-cp311-linux_armv7l.whl#sha256=8f7933e3ef9e63078d8a04b9b5f82a983e6c1786c837ee68208a78d4ee3db162 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,758   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.2-cp37-cp37m-linux_armv6l.whl#sha256=58fe1e7670be564481fb3b4d46f7f9eb47646f568b928dc53c3f553c1ec30a0c (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,758   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.2-cp37-cp37m-linux_armv7l.whl#sha256=58fe1e7670be564481fb3b4d46f7f9eb47646f568b928dc53c3f553c1ec30a0c (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,758   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp311-cp311-linux_armv6l.whl#sha256=4d1151f1d3d1b7105fc049fde1d3252d0091f523bd8ce933e82d398be06be511 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,758   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp311-cp311-linux_armv7l.whl#sha256=4d1151f1d3d1b7105fc049fde1d3252d0091f523bd8ce933e82d398be06be511 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,758   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=acaa8d28ac37350951a47092e089a5e3c6c4ee8d02ce0455e559b657a692b0c4 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,759   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=acaa8d28ac37350951a47092e089a5e3c6c4ee8d02ce0455e559b657a692b0c4 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,759   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=93f2629f485c4d97cfdaf5c9fc00d442bda01ebc474a13ed16942e75c3c8492d (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,759   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=93f2629f485c4d97cfdaf5c9fc00d442bda01ebc474a13ed16942e75c3c8492d (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,759   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=27666e9108370fcb2cb5ff8b60c17b5537e27e253e8b2a284952df7b6017ea58 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,759   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=27666e9108370fcb2cb5ff8b60c17b5537e27e253e8b2a284952df7b6017ea58 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,760   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=6ea21e32ac1b6cd341f322f197e9f095963f14a4b6c41c7fa143f007ed87979c (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,760   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=6ea21e32ac1b6cd341f322f197e9f095963f14a4b6c41c7fa143f007ed87979c (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,760   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=ff31419ba866cd63d7f3ac3c33502b694baaadda166815a90c9f64798d429b57 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,760   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=ff31419ba866cd63d7f3ac3c33502b694baaadda166815a90c9f64798d429b57 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,760   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e7956e85d5e03de680a8edeef2acff3678245470c9bbb1fc9ff3019434d41f40 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,761   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e7956e85d5e03de680a8edeef2acff3678245470c9bbb1fc9ff3019434d41f40 (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,761   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=ed66b8e17ec20bbbd6714454c632a74bdb56b24fc633bb68360bfe0097479faf (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,761   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=ed66b8e17ec20bbbd6714454c632a74bdb56b24fc633bb68360bfe0097479faf (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,761   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=0798cb73a2a95eeb2ef976af580f57e7f81e9dd3558aa1140cd426052154500e (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,761   Skipping link: No binaries permitted for vcf-subset: https://www.piwheels.org/simple/vcf-subset/vcf_subset-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=0798cb73a2a95eeb2ef976af580f57e7f81e9dd3558aa1140cd426052154500e (from https://www.piwheels.org/simple/vcf-subset/) (requires-python:>=3.7)
2024-06-20T16:38:45,762 Skipping link: not a file: https://www.piwheels.org/simple/vcf-subset/
2024-06-20T16:38:45,762 Skipping link: not a file: https://pypi.org/simple/vcf-subset/
2024-06-20T16:38:45,778 Given no hashes to check 1 links for project 'vcf-subset': discarding no candidates
2024-06-20T16:38:45,794 Collecting vcf-subset==1.1.2
2024-06-20T16:38:45,796   Created temporary directory: /tmp/pip-unpack-u2q0ypev
2024-06-20T16:38:45,841   Downloading vcf_subset-1.1.2.tar.gz (2.7 kB)
2024-06-20T16:38:45,867   Added vcf-subset==1.1.2 from https://files.pythonhosted.org/packages/91/bd/3cd2ab10453113bc3d527bc2ea8da704fffc921c8f2264a5cc332485d078/vcf_subset-1.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-v3nunv6p'
2024-06-20T16:38:45,871   Created temporary directory: /tmp/pip-build-env-obm1_36e
2024-06-20T16:38:45,882   Installing build dependencies: started
2024-06-20T16:38:45,883   Running command pip subprocess to install build dependencies
2024-06-20T16:38:47,037   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-06-20T16:38:47,554   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-20T16:38:49,030   Collecting setuptools>=42
2024-06-20T16:38:49,047     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.0-py3-none-any.whl (882 kB)
2024-06-20T16:38:49,248   Collecting pybind11>=2.10.0
2024-06-20T16:38:49,264     Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.12.0-py3-none-any.whl (234 kB)
2024-06-20T16:38:50,998   Installing collected packages: setuptools, pybind11
2024-06-20T16:38:53,715     Creating /tmp/pip-build-env-obm1_36e/overlay/bin
2024-06-20T16:38:53,718     changing mode of /tmp/pip-build-env-obm1_36e/overlay/bin/pybind11-config to 755
2024-06-20T16:38:53,732   Successfully installed pybind11-2.12.0 setuptools-70.1.0
2024-06-20T16:38:54,175   Installing build dependencies: finished with status 'done'
2024-06-20T16:38:54,180   Getting requirements to build wheel: started
2024-06-20T16:38:54,181   Running command Getting requirements to build wheel
2024-06-20T16:38:54,730   /tmp/pip-build-env-obm1_36e/overlay/lib/python3.9/site-packages/setuptools/dist.py:320: InformationOnly: Normalizing 'v1.1.2' to '1.1.2'
2024-06-20T16:38:54,730     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-20T16:38:54,770   running egg_info
2024-06-20T16:38:54,778   writing vcf_subset.egg-info/PKG-INFO
2024-06-20T16:38:54,781   writing dependency_links to vcf_subset.egg-info/dependency_links.txt
2024-06-20T16:38:54,783   writing top-level names to vcf_subset.egg-info/top_level.txt
2024-06-20T16:38:54,798   reading manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:38:54,802   writing manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:38:54,872   Getting requirements to build wheel: finished with status 'done'
2024-06-20T16:38:54,876   Created temporary directory: /tmp/pip-modern-metadata-jfigwbmc
2024-06-20T16:38:54,878   Preparing metadata (pyproject.toml): started
2024-06-20T16:38:54,879   Running command Preparing metadata (pyproject.toml)
2024-06-20T16:38:55,427   /tmp/pip-build-env-obm1_36e/overlay/lib/python3.9/site-packages/setuptools/dist.py:320: InformationOnly: Normalizing 'v1.1.2' to '1.1.2'
2024-06-20T16:38:55,428     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-20T16:38:55,468   running dist_info
2024-06-20T16:38:55,476   creating /tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info
2024-06-20T16:38:55,480   writing /tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/PKG-INFO
2024-06-20T16:38:55,484   writing dependency_links to /tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/dependency_links.txt
2024-06-20T16:38:55,486   writing top-level names to /tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/top_level.txt
2024-06-20T16:38:55,488   writing manifest file '/tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:38:55,500   reading manifest file '/tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:38:55,504   writing manifest file '/tmp/pip-modern-metadata-jfigwbmc/vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:38:55,505   creating '/tmp/pip-modern-metadata-jfigwbmc/vcf_subset-1.1.2.dist-info'
2024-06-20T16:38:55,610   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-20T16:38:55,616   Source in /tmp/pip-wheel-8r8_uld4/vcf-subset_0a9e9714869b4d5bb1797a36b13160f4 has version 1.1.2, which satisfies requirement vcf-subset==1.1.2 from https://files.pythonhosted.org/packages/91/bd/3cd2ab10453113bc3d527bc2ea8da704fffc921c8f2264a5cc332485d078/vcf_subset-1.1.2.tar.gz
2024-06-20T16:38:55,617   Removed vcf-subset==1.1.2 from https://files.pythonhosted.org/packages/91/bd/3cd2ab10453113bc3d527bc2ea8da704fffc921c8f2264a5cc332485d078/vcf_subset-1.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-v3nunv6p'
2024-06-20T16:38:55,622 Created temporary directory: /tmp/pip-unpack-jfh7c0h7
2024-06-20T16:38:55,623 Created temporary directory: /tmp/pip-unpack-gwryk7_0
2024-06-20T16:38:55,625 Building wheels for collected packages: vcf-subset
2024-06-20T16:38:55,629   Created temporary directory: /tmp/pip-wheel-igl7mr0f
2024-06-20T16:38:55,629   Destination directory: /tmp/pip-wheel-igl7mr0f
2024-06-20T16:38:55,631   Building wheel for vcf-subset (pyproject.toml): started
2024-06-20T16:38:55,632   Running command Building wheel for vcf-subset (pyproject.toml)
2024-06-20T16:38:56,140   /tmp/pip-build-env-obm1_36e/overlay/lib/python3.9/site-packages/setuptools/dist.py:320: InformationOnly: Normalizing 'v1.1.2' to '1.1.2'
2024-06-20T16:38:56,141     self.metadata.version = self._normalize_version(self.metadata.version)
2024-06-20T16:38:56,173   running bdist_wheel
2024-06-20T16:38:56,208   running build
2024-06-20T16:38:56,208   running build_ext
2024-06-20T16:38:56,216   building 'vcf_subset' extension
2024-06-20T16:38:56,216   creating build
2024-06-20T16:38:56,217   creating build/temp.linux-armv7l-cpython-39
2024-06-20T16:38:56,218   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=v1.1.2 -I/tmp/pip-build-env-obm1_36e/overlay/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c vcf_subset.cpp -o build/temp.linux-armv7l-cpython-39/vcf_subset.o -fvisibility=hidden -g0 -std=c++2a -O3
2024-06-20T16:39:15,588   creating build/lib.linux-armv7l-cpython-39
2024-06-20T16:39:15,589   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/vcf_subset.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/vcf_subset.cpython-39-arm-linux-gnueabihf.so
2024-06-20T16:39:15,879   installing to build/bdist.linux-armv7l/wheel
2024-06-20T16:39:15,879   running install
2024-06-20T16:39:15,905   running install_lib
2024-06-20T16:39:15,913   creating build/bdist.linux-armv7l
2024-06-20T16:39:15,914   creating build/bdist.linux-armv7l/wheel
2024-06-20T16:39:15,915   copying build/lib.linux-armv7l-cpython-39/vcf_subset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2024-06-20T16:39:15,920   running install_egg_info
2024-06-20T16:39:15,934   running egg_info
2024-06-20T16:39:15,940   writing vcf_subset.egg-info/PKG-INFO
2024-06-20T16:39:15,943   writing dependency_links to vcf_subset.egg-info/dependency_links.txt
2024-06-20T16:39:15,946   writing top-level names to vcf_subset.egg-info/top_level.txt
2024-06-20T16:39:15,955   reading manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:39:15,959   writing manifest file 'vcf_subset.egg-info/SOURCES.txt'
2024-06-20T16:39:15,961   Copying vcf_subset.egg-info to build/bdist.linux-armv7l/wheel/vcf_subset-1.1.2-py3.9.egg-info
2024-06-20T16:39:15,972   running install_scripts
2024-06-20T16:39:16,022   creating build/bdist.linux-armv7l/wheel/vcf_subset-1.1.2.dist-info/WHEEL
2024-06-20T16:39:16,025   creating '/tmp/pip-wheel-igl7mr0f/.tmp-xjtvnz1b/vcf_subset-1.1.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-20T16:39:16,055   adding 'vcf_subset.cpython-39-arm-linux-gnueabihf.so'
2024-06-20T16:39:16,058   adding 'vcf_subset-1.1.2.dist-info/METADATA'
2024-06-20T16:39:16,059   adding 'vcf_subset-1.1.2.dist-info/WHEEL'
2024-06-20T16:39:16,060   adding 'vcf_subset-1.1.2.dist-info/top_level.txt'
2024-06-20T16:39:16,061   adding 'vcf_subset-1.1.2.dist-info/RECORD'
2024-06-20T16:39:16,063   removing build/bdist.linux-armv7l/wheel
2024-06-20T16:39:16,142   Building wheel for vcf-subset (pyproject.toml): finished with status 'done'
2024-06-20T16:39:16,149   Created wheel for vcf-subset: filename=vcf_subset-1.1.2-cp39-cp39-linux_armv7l.whl size=64514 sha256=060ac5f0798ff4425851db078c67265c7e0a78abe4957a867c107dea82bbef67
2024-06-20T16:39:16,150   Stored in directory: /tmp/pip-ephem-wheel-cache-2ci5oa3a/wheels/c1/dd/3b/a1c40b1d6f2ae4817cf070a02ed31188416b69cde9bfd413d6
2024-06-20T16:39:16,159 Successfully built vcf-subset
2024-06-20T16:39:16,165 Removed build tracker: '/tmp/pip-build-tracker-v3nunv6p'