2024-06-25T09:56:35,826 Created temporary directory: /tmp/pip-build-tracker-9xyg67s4 2024-06-25T09:56:35,827 Initialized build tracking at /tmp/pip-build-tracker-9xyg67s4 2024-06-25T09:56:35,828 Created build tracker: /tmp/pip-build-tracker-9xyg67s4 2024-06-25T09:56:35,828 Entered build tracker: /tmp/pip-build-tracker-9xyg67s4 2024-06-25T09:56:35,829 Created temporary directory: /tmp/pip-wheel-qm4un3wi 2024-06-25T09:56:35,832 Created temporary directory: /tmp/pip-ephem-wheel-cache-81pqzari 2024-06-25T09:56:35,854 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-25T09:56:35,857 2 location(s) to search for versions of immunebuilder: 2024-06-25T09:56:35,857 * https://pypi.org/simple/immunebuilder/ 2024-06-25T09:56:35,857 * https://www.piwheels.org/simple/immunebuilder/ 2024-06-25T09:56:35,858 Fetching project page and analyzing links: https://pypi.org/simple/immunebuilder/ 2024-06-25T09:56:35,858 Getting page https://pypi.org/simple/immunebuilder/ 2024-06-25T09:56:35,860 Found index url https://pypi.org/simple/ 2024-06-25T09:56:36,077 Fetched page https://pypi.org/simple/immunebuilder/ as application/vnd.pypi.simple.v1+json 2024-06-25T09:56:36,083 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/5b/62/c90966963cfe975012a477b77393d89ff2e1e0ea1ed99085b154de7ab254/ImmuneBuilder-0.0.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,083 Found link https://files.pythonhosted.org/packages/af/d4/7b69ec9429555e3ed51eccd9f8ad80be9ee756a89d377d623d66c74f55a2/ImmuneBuilder-0.0.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.1 2024-06-25T09:56:36,084 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/90/36/fa736209f45841978ca31c2cb6567eebc2107e2e348fe3090bbe28eb7ab2/ImmuneBuilder-0.0.3-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,085 Found link https://files.pythonhosted.org/packages/fb/25/9724d7fd557836d7b79f531f35462778b7b37e10bbfc0f990afcee89a041/ImmuneBuilder-0.0.3.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.3 2024-06-25T09:56:36,085 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/f8/22/dce7ffded153ca4d8678f0113c30067b9242e64ee0da7519561ee68643ac/ImmuneBuilder-0.0.4-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,086 Found link https://files.pythonhosted.org/packages/68/53/26b06e59cce6d6ffc16f1a1022c930d64c414339a916de677ade0cc2ea10/ImmuneBuilder-0.0.4.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.4 2024-06-25T09:56:36,087 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/35/66/6e6343d51bcf15256172bcc7fb963629e76fd192c60065444674b9dde2f3/ImmuneBuilder-0.0.5-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,087 Found link https://files.pythonhosted.org/packages/29/f5/d54e3520570e95b3c0147dc384449496bd6391d00e539b60be4e37b289fc/ImmuneBuilder-0.0.5.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.5 2024-06-25T09:56:36,088 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/d6/49/4bd7b45fa9c8eda204f2e42439cb65dfef955dbb5f31f38dd2321bb7cb82/ImmuneBuilder-0.0.6-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,089 Found link https://files.pythonhosted.org/packages/91/d1/f1f5cefc4b2a3eecbca98b256fb2772e82fa08e4d1ea46aae03f129820c1/ImmuneBuilder-0.0.6.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.6 2024-06-25T09:56:36,089 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/48/6f/37a4ce9515bc3e09728ee1e7b60b16de96b8a18aaf1a363b45f6d8871a9c/ImmuneBuilder-0.0.7-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,090 Found link https://files.pythonhosted.org/packages/83/a1/ff8708e36e8422f8a3badb7c4106d307a5bdaefe75a3b13999305f837158/ImmuneBuilder-0.0.7.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.7 2024-06-25T09:56:36,091 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/d7/fc/d8cf7e599cbff74caabde2fe36a1baf6d87568fe259870604e9f4cb4503b/ImmuneBuilder-0.0.8-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,092 Found link https://files.pythonhosted.org/packages/d2/53/b0a301d8f4680ef71bdc6eedfdf10bc8b18852b6f7e50a9afd2f2c9d6801/ImmuneBuilder-0.0.8.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.8 2024-06-25T09:56:36,092 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/a7/1a/fbb2cda814f30c92d36e9d522cf6aeecf929fc20b8990874c4afcd9c0581/ImmuneBuilder-0.0.9-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,093 Found link https://files.pythonhosted.org/packages/48/b7/a30233d46457101c6e4cc35a7564f937c8cfd291d4785f76863faa8ed99d/ImmuneBuilder-0.0.9.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 0.0.9 2024-06-25T09:56:36,093 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/c4/5a/cf6f2b45429d404ad5ce6c3d98afd2d460982e4093d78b6bf7f1d621181f/ImmuneBuilder-1.0.0-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,094 Found link https://files.pythonhosted.org/packages/46/eb/9dd56f05303ae1d929d9811a9dff396e9b30cb8ca16d38f7be39666a1ee7/ImmuneBuilder-1.0.0.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.0.0 2024-06-25T09:56:36,094 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/af/e2/703397ee6569f9490a6b023fb561c76791ce96d8d01819b3638e4bbb4322/ImmuneBuilder-1.0.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,095 Found link https://files.pythonhosted.org/packages/20/e9/73aaf5e2f11e673073318acffa37d12e6ed6100a52455b1dd6fb26be5aa1/ImmuneBuilder-1.0.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.0.1 2024-06-25T09:56:36,095 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/9e/16/6e54cee4269758c3143f2eae8eb5f1bc79684c6e90aa843f5c60343285e0/ImmuneBuilder-1.1.1-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,096 Found link https://files.pythonhosted.org/packages/0b/65/7ee2188e8cb5a1316f14973c74cd278b3d257687eb89a9442f1cad316b7f/immunebuilder-1.1.1.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.1.1 2024-06-25T09:56:36,097 Skipping link: No binaries permitted for immunebuilder: https://files.pythonhosted.org/packages/53/a4/cf8c53a5cf38c2ee303c020d1769e7bb98ecf4d154636062e2f940a1af13/ImmuneBuilder-1.2-py3-none-any.whl (from https://pypi.org/simple/immunebuilder/) 2024-06-25T09:56:36,098 Found link https://files.pythonhosted.org/packages/2b/43/6747ce9f4a9f6e5db328a68eaad1993f2d3d4770e4d424057b46c6934054/immunebuilder-1.2.tar.gz (from https://pypi.org/simple/immunebuilder/), version: 1.2 2024-06-25T09:56:36,098 Fetching project page and analyzing links: https://www.piwheels.org/simple/immunebuilder/ 2024-06-25T09:56:36,099 Getting page https://www.piwheels.org/simple/immunebuilder/ 2024-06-25T09:56:36,100 Found index url https://www.piwheels.org/simple/ 2024-06-25T09:56:36,260 Fetched page https://www.piwheels.org/simple/immunebuilder/ as text/html 2024-06-25T09:56:36,264 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-1.1.1-py3-none-any.whl#sha256=bad8942b3704120323b8166d791f90015e7d2c1bf434df6497ff9e117703c2a3 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,265 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-1.0.1-py3-none-any.whl#sha256=7e0784d817c4b42b8fe85d53c345fc0f25d5968ae28bc64c46c34e47be219080 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,266 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-1.0.0-py3-none-any.whl#sha256=e61314ced732f8103415cc6ea74f3f788ffb761863610f887632520a977b3484 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,266 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.9-py3-none-any.whl#sha256=b5322092cb58dcbe2ab1a9b8781d69d00ab6d52d09bce30f28e71e79c4fa4684 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,267 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.8-py3-none-any.whl#sha256=a50dc8a61dfe4dc9ef59dc880ba98f24e41920b28efa899ed2dc0b2db2648912 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,267 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.7-py3-none-any.whl#sha256=3ec4108e72eddbc98e73efabf9a3c1d1a147044a3749af0176544cdf673ec56e (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,268 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.6-py3-none-any.whl#sha256=906483ee7c974a1f2e4a384cd2020c16ea43495bdc0e6c4d9b3028f50d22e418 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,269 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.5-py3-none-any.whl#sha256=178492c9aaecd59db5994177900d7e26e07a7afce013a2b098cfed20db59d9f6 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,269 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.4-py3-none-any.whl#sha256=4129c8b3ef77d0552a4b113b22271bebe5072901623a2255b0a05fd78fb62b46 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,269 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.3-py3-none-any.whl#sha256=68bf4d794ec797fe4bb54138fd3819abce9954f8eeba79f9c5ca9f287398cb4c (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,270 Skipping link: No binaries permitted for immunebuilder: https://www.piwheels.org/simple/immunebuilder/ImmuneBuilder-0.0.1-py3-none-any.whl#sha256=ef3805955cc6eac12f903ff1e1d3378c5d80adb8d4df560a93d6fba2278c04e6 (from https://www.piwheels.org/simple/immunebuilder/) 2024-06-25T09:56:36,271 Skipping link: not a file: https://www.piwheels.org/simple/immunebuilder/ 2024-06-25T09:56:36,271 Skipping link: not a file: https://pypi.org/simple/immunebuilder/ 2024-06-25T09:56:36,292 Given no hashes to check 1 links for project 'immunebuilder': discarding no candidates 2024-06-25T09:56:36,312 Collecting immunebuilder==1.2 2024-06-25T09:56:36,314 Created temporary directory: /tmp/pip-unpack-rp179sn4 2024-06-25T09:56:36,526 Downloading immunebuilder-1.2.tar.gz (23 kB) 2024-06-25T09:56:36,594 Added immunebuilder==1.2 from https://files.pythonhosted.org/packages/2b/43/6747ce9f4a9f6e5db328a68eaad1993f2d3d4770e4d424057b46c6934054/immunebuilder-1.2.tar.gz to build tracker '/tmp/pip-build-tracker-9xyg67s4' 2024-06-25T09:56:36,596 Running setup.py (path:/tmp/pip-wheel-qm4un3wi/immunebuilder_d08124f841324ce8a400f0eaa3cb696e/setup.py) egg_info for package immunebuilder 2024-06-25T09:56:36,597 Created temporary directory: /tmp/pip-pip-egg-info-8qvyq5sr 2024-06-25T09:56:36,598 Preparing metadata (setup.py): started 2024-06-25T09:56:36,599 Running command python setup.py egg_info 2024-06-25T09:56:37,543 running egg_info 2024-06-25T09:56:37,544 creating /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info 2024-06-25T09:56:37,571 writing /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/PKG-INFO 2024-06-25T09:56:37,575 writing dependency_links to /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/dependency_links.txt 2024-06-25T09:56:37,577 writing entry points to /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/entry_points.txt 2024-06-25T09:56:37,578 writing requirements to /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/requires.txt 2024-06-25T09:56:37,580 writing top-level names to /tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/top_level.txt 2024-06-25T09:56:37,581 writing manifest file '/tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-25T09:56:37,664 reading manifest file '/tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-25T09:56:37,666 reading manifest template 'MANIFEST.in' 2024-06-25T09:56:37,668 adding license file 'LICENSE' 2024-06-25T09:56:37,670 writing manifest file '/tmp/pip-pip-egg-info-8qvyq5sr/ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-25T09:56:37,777 Preparing metadata (setup.py): finished with status 'done' 2024-06-25T09:56:37,782 Source in /tmp/pip-wheel-qm4un3wi/immunebuilder_d08124f841324ce8a400f0eaa3cb696e has version 1.2, which satisfies requirement immunebuilder==1.2 from https://files.pythonhosted.org/packages/2b/43/6747ce9f4a9f6e5db328a68eaad1993f2d3d4770e4d424057b46c6934054/immunebuilder-1.2.tar.gz 2024-06-25T09:56:37,782 Removed immunebuilder==1.2 from https://files.pythonhosted.org/packages/2b/43/6747ce9f4a9f6e5db328a68eaad1993f2d3d4770e4d424057b46c6934054/immunebuilder-1.2.tar.gz from build tracker '/tmp/pip-build-tracker-9xyg67s4' 2024-06-25T09:56:37,787 Created temporary directory: /tmp/pip-unpack-h1tn_hbt 2024-06-25T09:56:37,788 Created temporary directory: /tmp/pip-unpack-om6kgbih 2024-06-25T09:56:37,797 Building wheels for collected packages: immunebuilder 2024-06-25T09:56:37,801 Created temporary directory: /tmp/pip-wheel-_jcndoq0 2024-06-25T09:56:37,801 Building wheel for immunebuilder (setup.py): started 2024-06-25T09:56:37,803 Destination directory: /tmp/pip-wheel-_jcndoq0 2024-06-25T09:56:37,803 Running command python setup.py bdist_wheel 2024-06-25T09:56:38,677 running bdist_wheel 2024-06-25T09:56:38,812 running build 2024-06-25T09:56:38,812 running build_py 2024-06-25T09:56:38,841 creating build 2024-06-25T09:56:38,842 creating build/lib 2024-06-25T09:56:38,842 creating build/lib/ImmuneBuilder 2024-06-25T09:56:38,844 copying ImmuneBuilder/rigids.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,846 copying ImmuneBuilder/constants.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,849 copying ImmuneBuilder/util.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,851 copying ImmuneBuilder/ABodyBuilder2.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,854 copying ImmuneBuilder/NanoBodyBuilder2.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,856 copying ImmuneBuilder/sequence_checks.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,857 copying ImmuneBuilder/refine.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,860 copying ImmuneBuilder/__init__.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,861 copying ImmuneBuilder/TCRBuilder2.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,864 copying ImmuneBuilder/models.py -> build/lib/ImmuneBuilder 2024-06-25T09:56:38,866 running egg_info 2024-06-25T09:56:38,892 writing ImmuneBuilder.egg-info/PKG-INFO 2024-06-25T09:56:38,896 writing dependency_links to ImmuneBuilder.egg-info/dependency_links.txt 2024-06-25T09:56:38,897 writing entry points to ImmuneBuilder.egg-info/entry_points.txt 2024-06-25T09:56:38,899 writing requirements to ImmuneBuilder.egg-info/requires.txt 2024-06-25T09:56:38,900 writing top-level names to ImmuneBuilder.egg-info/top_level.txt 2024-06-25T09:56:38,929 reading manifest file 'ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-25T09:56:38,931 reading manifest template 'MANIFEST.in' 2024-06-25T09:56:38,933 adding license file 'LICENSE' 2024-06-25T09:56:38,936 writing manifest file 'ImmuneBuilder.egg-info/SOURCES.txt' 2024-06-25T09:56:38,938 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ImmuneBuilder.trained_model' is absent from the `packages` configuration. 2024-06-25T09:56:38,939 !! 2024-06-25T09:56:38,940 ******************************************************************************** 2024-06-25T09:56:38,941 ############################ 2024-06-25T09:56:38,941 # Package would be ignored # 2024-06-25T09:56:38,941 ############################ 2024-06-25T09:56:38,942 Python recognizes 'ImmuneBuilder.trained_model' as an importable package[^1], 2024-06-25T09:56:38,942 but it is absent from setuptools' `packages` configuration. 2024-06-25T09:56:38,943 This leads to an ambiguous overall configuration. If you want to distribute this 2024-06-25T09:56:38,943 package, please make sure that 'ImmuneBuilder.trained_model' is explicitly added 2024-06-25T09:56:38,944 to the `packages` configuration field. 2024-06-25T09:56:38,944 Alternatively, you can also rely on setuptools' discovery methods 2024-06-25T09:56:38,945 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-06-25T09:56:38,945 instead of `find_packages(...)`/`find:`). 2024-06-25T09:56:38,946 You can read more about "package discovery" on setuptools documentation page: 2024-06-25T09:56:38,947 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-06-25T09:56:38,948 If you don't want 'ImmuneBuilder.trained_model' to be distributed and are 2024-06-25T09:56:38,948 already explicitly excluding 'ImmuneBuilder.trained_model' via 2024-06-25T09:56:38,949 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-06-25T09:56:38,949 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-06-25T09:56:38,950 combination with a more fine grained `package-data` configuration. 2024-06-25T09:56:38,950 You can read more about "package data files" on setuptools documentation page: 2024-06-25T09:56:38,951 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-06-25T09:56:38,953 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-06-25T09:56:38,953 even if it does not contain any `.py` files. 2024-06-25T09:56:38,954 On the other hand, currently there is no concept of package data 2024-06-25T09:56:38,954 directory, all directories are treated like packages. 2024-06-25T09:56:38,955 ******************************************************************************** 2024-06-25T09:56:38,956 !! 2024-06-25T09:56:38,956 check.warn(importable) 2024-06-25T09:56:38,957 creating build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,957 copying ImmuneBuilder/trained_model/.gitkeep -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,958 copying ImmuneBuilder/trained_model/antibody_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,958 copying ImmuneBuilder/trained_model/antibody_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,959 copying ImmuneBuilder/trained_model/antibody_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,959 copying ImmuneBuilder/trained_model/antibody_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,960 copying ImmuneBuilder/trained_model/nanobody_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,960 copying ImmuneBuilder/trained_model/nanobody_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,960 copying ImmuneBuilder/trained_model/nanobody_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,961 copying ImmuneBuilder/trained_model/nanobody_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,961 copying ImmuneBuilder/trained_model/tcr2_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,963 copying ImmuneBuilder/trained_model/tcr2_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,965 copying ImmuneBuilder/trained_model/tcr2_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,966 copying ImmuneBuilder/trained_model/tcr2_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,968 copying ImmuneBuilder/trained_model/tcr_model_1 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,970 copying ImmuneBuilder/trained_model/tcr_model_2 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,971 copying ImmuneBuilder/trained_model/tcr_model_3 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:38,973 copying ImmuneBuilder/trained_model/tcr_model_4 -> build/lib/ImmuneBuilder/trained_model 2024-06-25T09:56:39,000 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-06-25T09:56:39,001 !! 2024-06-25T09:56:39,002 ******************************************************************************** 2024-06-25T09:56:39,002 Please avoid running ``setup.py`` directly. 2024-06-25T09:56:39,003 Instead, use pypa/build, pypa/installer or other 2024-06-25T09:56:39,003 standards-based tools. 2024-06-25T09:56:39,004 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-06-25T09:56:39,005 ******************************************************************************** 2024-06-25T09:56:39,005 !! 2024-06-25T09:56:39,006 self.initialize_options() 2024-06-25T09:56:39,028 installing to build/bdist.linux-armv7l/wheel 2024-06-25T09:56:39,029 running install 2024-06-25T09:56:39,054 running install_lib 2024-06-25T09:56:39,081 creating build/bdist.linux-armv7l 2024-06-25T09:56:39,081 creating build/bdist.linux-armv7l/wheel 2024-06-25T09:56:39,083 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,084 copying build/lib/ImmuneBuilder/rigids.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,086 copying build/lib/ImmuneBuilder/constants.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,089 copying build/lib/ImmuneBuilder/util.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,091 copying build/lib/ImmuneBuilder/ABodyBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,093 copying build/lib/ImmuneBuilder/NanoBodyBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,096 copying build/lib/ImmuneBuilder/sequence_checks.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,098 copying build/lib/ImmuneBuilder/refine.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,101 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,101 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,103 copying build/lib/ImmuneBuilder/trained_model/.gitkeep -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,105 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,106 copying build/lib/ImmuneBuilder/trained_model/antibody_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,107 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,109 copying build/lib/ImmuneBuilder/trained_model/tcr_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,110 copying build/lib/ImmuneBuilder/trained_model/tcr_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,112 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,113 copying build/lib/ImmuneBuilder/trained_model/tcr_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,115 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,116 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,118 copying build/lib/ImmuneBuilder/trained_model/tcr_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,119 copying build/lib/ImmuneBuilder/trained_model/antibody_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,120 copying build/lib/ImmuneBuilder/trained_model/nanobody_model_4 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,122 copying build/lib/ImmuneBuilder/trained_model/tcr2_model_2 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,123 copying build/lib/ImmuneBuilder/trained_model/antibody_model_1 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,125 copying build/lib/ImmuneBuilder/trained_model/antibody_model_3 -> build/bdist.linux-armv7l/wheel/ImmuneBuilder/trained_model 2024-06-25T09:56:39,126 copying build/lib/ImmuneBuilder/__init__.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,128 copying build/lib/ImmuneBuilder/TCRBuilder2.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,130 copying build/lib/ImmuneBuilder/models.py -> build/bdist.linux-armv7l/wheel/ImmuneBuilder 2024-06-25T09:56:39,132 running install_egg_info 2024-06-25T09:56:39,167 Copying ImmuneBuilder.egg-info to build/bdist.linux-armv7l/wheel/ImmuneBuilder-1.2-py3.11.egg-info 2024-06-25T09:56:39,178 running install_scripts 2024-06-25T09:56:39,194 creating build/bdist.linux-armv7l/wheel/ImmuneBuilder-1.2.dist-info/WHEEL 2024-06-25T09:56:39,196 creating '/tmp/pip-wheel-_jcndoq0/ImmuneBuilder-1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-25T09:56:39,199 adding 'ImmuneBuilder/ABodyBuilder2.py' 2024-06-25T09:56:39,201 adding 'ImmuneBuilder/NanoBodyBuilder2.py' 2024-06-25T09:56:39,203 adding 'ImmuneBuilder/TCRBuilder2.py' 2024-06-25T09:56:39,205 adding 'ImmuneBuilder/__init__.py' 2024-06-25T09:56:39,207 adding 'ImmuneBuilder/constants.py' 2024-06-25T09:56:39,209 adding 'ImmuneBuilder/models.py' 2024-06-25T09:56:39,211 adding 'ImmuneBuilder/refine.py' 2024-06-25T09:56:39,213 adding 'ImmuneBuilder/rigids.py' 2024-06-25T09:56:39,214 adding 'ImmuneBuilder/sequence_checks.py' 2024-06-25T09:56:39,216 adding 'ImmuneBuilder/util.py' 2024-06-25T09:56:39,218 adding 'ImmuneBuilder/trained_model/.gitkeep' 2024-06-25T09:56:39,219 adding 'ImmuneBuilder/trained_model/antibody_model_1' 2024-06-25T09:56:39,220 adding 'ImmuneBuilder/trained_model/antibody_model_2' 2024-06-25T09:56:39,221 adding 'ImmuneBuilder/trained_model/antibody_model_3' 2024-06-25T09:56:39,222 adding 'ImmuneBuilder/trained_model/antibody_model_4' 2024-06-25T09:56:39,223 adding 'ImmuneBuilder/trained_model/nanobody_model_1' 2024-06-25T09:56:39,224 adding 'ImmuneBuilder/trained_model/nanobody_model_2' 2024-06-25T09:56:39,225 adding 'ImmuneBuilder/trained_model/nanobody_model_3' 2024-06-25T09:56:39,226 adding 'ImmuneBuilder/trained_model/nanobody_model_4' 2024-06-25T09:56:39,228 adding 'ImmuneBuilder/trained_model/tcr2_model_1' 2024-06-25T09:56:39,229 adding 'ImmuneBuilder/trained_model/tcr2_model_2' 2024-06-25T09:56:39,230 adding 'ImmuneBuilder/trained_model/tcr2_model_3' 2024-06-25T09:56:39,231 adding 'ImmuneBuilder/trained_model/tcr2_model_4' 2024-06-25T09:56:39,232 adding 'ImmuneBuilder/trained_model/tcr_model_1' 2024-06-25T09:56:39,233 adding 'ImmuneBuilder/trained_model/tcr_model_2' 2024-06-25T09:56:39,234 adding 'ImmuneBuilder/trained_model/tcr_model_3' 2024-06-25T09:56:39,235 adding 'ImmuneBuilder/trained_model/tcr_model_4' 2024-06-25T09:56:39,237 adding 'ImmuneBuilder-1.2.dist-info/LICENSE' 2024-06-25T09:56:39,239 adding 'ImmuneBuilder-1.2.dist-info/METADATA' 2024-06-25T09:56:39,240 adding 'ImmuneBuilder-1.2.dist-info/WHEEL' 2024-06-25T09:56:39,241 adding 'ImmuneBuilder-1.2.dist-info/entry_points.txt' 2024-06-25T09:56:39,242 adding 'ImmuneBuilder-1.2.dist-info/top_level.txt' 2024-06-25T09:56:39,243 adding 'ImmuneBuilder-1.2.dist-info/RECORD' 2024-06-25T09:56:39,245 removing build/bdist.linux-armv7l/wheel 2024-06-25T09:56:39,361 Building wheel for immunebuilder (setup.py): finished with status 'done' 2024-06-25T09:56:39,364 Created wheel for immunebuilder: filename=ImmuneBuilder-1.2-py3-none-any.whl size=32599 sha256=9feb02d019ced65d552a993a29967525a60bca22c2738302b18f4d22c75db313 2024-06-25T09:56:39,365 Stored in directory: /tmp/pip-ephem-wheel-cache-81pqzari/wheels/c7/85/fa/fbedd91ae7d02dca6d10d5811fde6834c2b9b2fc1e9ddd7cde 2024-06-25T09:56:39,376 Successfully built immunebuilder 2024-06-25T09:56:39,380 Removed build tracker: '/tmp/pip-build-tracker-9xyg67s4'