2024-06-25T13:06:32,791 Created temporary directory: /tmp/pip-build-tracker-7ax0g5qx
2024-06-25T13:06:32,792 Initialized build tracking at /tmp/pip-build-tracker-7ax0g5qx
2024-06-25T13:06:32,792 Created build tracker: /tmp/pip-build-tracker-7ax0g5qx
2024-06-25T13:06:32,793 Entered build tracker: /tmp/pip-build-tracker-7ax0g5qx
2024-06-25T13:06:32,794 Created temporary directory: /tmp/pip-wheel-_5npsiuy
2024-06-25T13:06:32,797 Created temporary directory: /tmp/pip-ephem-wheel-cache-dmiz1l7q
2024-06-25T13:06:32,819 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-25T13:06:32,823 2 location(s) to search for versions of nnunetv2-bm-custom:
2024-06-25T13:06:32,823 * https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:32,823 * https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:32,824 Fetching project page and analyzing links: https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:32,825 Getting page https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:32,826 Found index url https://pypi.org/simple/
2024-06-25T13:06:33,039 Fetched page https://pypi.org/simple/nnunetv2-bm-custom/ as application/vnd.pypi.simple.v1+json
2024-06-25T13:06:33,041   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://files.pythonhosted.org/packages/d2/cb/f809cd3fa316db370dd94a85f2f465cd8fad099a59d30697b5056b1a88f5/nnunetv2_bm_custom-2.5-py3-none-any.whl (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-25T13:06:33,042   Found link https://files.pythonhosted.org/packages/8b/f0/2c495096ef8c0545849af606524bc9403a7e12d3e4f4ea5a9690bde89f5a/nnunetv2_bm_custom-2.5.tar.gz (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9), version: 2.5
2024-06-25T13:06:33,043   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://files.pythonhosted.org/packages/b2/b4/93d4521b25803d4f8c385ef05f8098536fae28da92e30a25706d3aa8cc19/nnunetv2_bm_custom-2.5.1-py3-none-any.whl (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-25T13:06:33,044   Found link https://files.pythonhosted.org/packages/81/09/6f1125669f8b3b18e8bf33188204f52d31ac088e594a196584d796a3aa53/nnunetv2_bm_custom-2.5.1.tar.gz (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9), version: 2.5.1
2024-06-25T13:06:33,045   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://files.pythonhosted.org/packages/48/8e/2117a15c065f46d7cb86b6281d1ad299853a82711fc8086068c68bffa20f/nnunetv2_bm_custom-2.5.2-py3-none-any.whl (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-25T13:06:33,046   Found link https://files.pythonhosted.org/packages/bd/03/bd1a7f424127245c585b4043464fa8910ac0588c620b1f903cfea3f61c03/nnunetv2_bm_custom-2.5.2.tar.gz (from https://pypi.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9), version: 2.5.2
2024-06-25T13:06:33,047 Fetching project page and analyzing links: https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:33,047 Getting page https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:33,049 Found index url https://www.piwheels.org/simple/
2024-06-25T13:06:33,206 Fetched page https://www.piwheels.org/simple/nnunetv2-bm-custom/ as text/html
2024-06-25T13:06:33,208   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://www.piwheels.org/simple/nnunetv2-bm-custom/nnunetv2_bm_custom-2.5.1-py3-none-any.whl#sha256=4ae7910020005aaef19a5125a68e44e1ee4ad857d77191b62c28327582f36ab4 (from https://www.piwheels.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-25T13:06:33,209   Skipping link: No binaries permitted for nnunetv2-bm-custom: https://www.piwheels.org/simple/nnunetv2-bm-custom/nnunetv2_bm_custom-2.5-py3-none-any.whl#sha256=5aa2678488762dc6e106f5926ac8a1822d4c6d4c506bbfb3cd0554cbfe61ae6a (from https://www.piwheels.org/simple/nnunetv2-bm-custom/) (requires-python:>=3.9)
2024-06-25T13:06:33,210 Skipping link: not a file: https://www.piwheels.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:33,210 Skipping link: not a file: https://pypi.org/simple/nnunetv2-bm-custom/
2024-06-25T13:06:33,230 Given no hashes to check 1 links for project 'nnunetv2-bm-custom': discarding no candidates
2024-06-25T13:06:33,250 Collecting nnunetv2-bm-custom==2.5.2
2024-06-25T13:06:33,252   Created temporary directory: /tmp/pip-unpack-kmuv_k2b
2024-06-25T13:06:33,463   Downloading nnunetv2_bm_custom-2.5.2.tar.gz (186 kB)
2024-06-25T13:06:33,880   Added nnunetv2-bm-custom==2.5.2 from https://files.pythonhosted.org/packages/bd/03/bd1a7f424127245c585b4043464fa8910ac0588c620b1f903cfea3f61c03/nnunetv2_bm_custom-2.5.2.tar.gz to build tracker '/tmp/pip-build-tracker-7ax0g5qx'
2024-06-25T13:06:33,885   Created temporary directory: /tmp/pip-build-env-w9a32fwv
2024-06-25T13:06:33,890   Installing build dependencies: started
2024-06-25T13:06:33,891   Running command pip subprocess to install build dependencies
2024-06-25T13:06:35,075   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-06-25T13:06:35,590   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-06-25T13:06:37,019   Collecting setuptools>=67.8.0
2024-06-25T13:06:37,034     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.1-py3-none-any.whl (883 kB)
2024-06-25T13:06:39,668   Installing collected packages: setuptools
2024-06-25T13:06:42,166   Successfully installed setuptools-70.1.1

2024-06-25T13:06:42,478   [notice] A new release of pip is available: 24.0 -> 24.1
2024-06-25T13:06:42,479   [notice] To update, run: python3 -m pip install --upgrade pip
2024-06-25T13:06:42,741   Installing build dependencies: finished with status 'done'
2024-06-25T13:06:42,745   Getting requirements to build wheel: started
2024-06-25T13:06:42,746   Running command Getting requirements to build wheel
2024-06-25T13:06:43,584   running egg_info
2024-06-25T13:06:43,588   writing nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-25T13:06:43,593   writing dependency_links to nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-25T13:06:43,595   writing entry points to nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-25T13:06:43,598   writing requirements to nnunetv2_bm_custom.egg-info/requires.txt
2024-06-25T13:06:43,599   writing top-level names to nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-25T13:06:43,659   reading manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:43,664   adding license file 'LICENSE'
2024-06-25T13:06:43,673   writing manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:43,789   Getting requirements to build wheel: finished with status 'done'
2024-06-25T13:06:43,792   Created temporary directory: /tmp/pip-modern-metadata-1jh5ut0_
2024-06-25T13:06:43,795   Preparing metadata (pyproject.toml): started
2024-06-25T13:06:43,796   Running command Preparing metadata (pyproject.toml)
2024-06-25T13:06:44,561   running dist_info
2024-06-25T13:06:44,565   creating /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info
2024-06-25T13:06:44,569   writing /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-25T13:06:44,574   writing dependency_links to /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-25T13:06:44,577   writing entry points to /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-25T13:06:44,580   writing requirements to /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/requires.txt
2024-06-25T13:06:44,581   writing top-level names to /tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-25T13:06:44,582   writing manifest file '/tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:44,634   reading manifest file '/tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:44,636   adding license file 'LICENSE'
2024-06-25T13:06:44,643   writing manifest file '/tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:44,645   creating '/tmp/pip-modern-metadata-1jh5ut0_/nnunetv2_bm_custom-2.5.2.dist-info'
2024-06-25T13:06:44,796   Preparing metadata (pyproject.toml): finished with status 'done'
2024-06-25T13:06:44,805   Source in /tmp/pip-wheel-_5npsiuy/nnunetv2-bm-custom_98aeda2783114b3db884cc3ee34275cb has version 2.5.2, which satisfies requirement nnunetv2-bm-custom==2.5.2 from https://files.pythonhosted.org/packages/bd/03/bd1a7f424127245c585b4043464fa8910ac0588c620b1f903cfea3f61c03/nnunetv2_bm_custom-2.5.2.tar.gz
2024-06-25T13:06:44,806   Removed nnunetv2-bm-custom==2.5.2 from https://files.pythonhosted.org/packages/bd/03/bd1a7f424127245c585b4043464fa8910ac0588c620b1f903cfea3f61c03/nnunetv2_bm_custom-2.5.2.tar.gz from build tracker '/tmp/pip-build-tracker-7ax0g5qx'
2024-06-25T13:06:44,816 Created temporary directory: /tmp/pip-unpack-w3oxxbfz
2024-06-25T13:06:44,817 Created temporary directory: /tmp/pip-unpack-v9va4riy
2024-06-25T13:06:44,855 Building wheels for collected packages: nnunetv2-bm-custom
2024-06-25T13:06:44,859   Created temporary directory: /tmp/pip-wheel-w1hydb5g
2024-06-25T13:06:44,859   Destination directory: /tmp/pip-wheel-w1hydb5g
2024-06-25T13:06:44,861   Building wheel for nnunetv2-bm-custom (pyproject.toml): started
2024-06-25T13:06:44,863   Running command Building wheel for nnunetv2-bm-custom (pyproject.toml)
2024-06-25T13:06:45,603   running bdist_wheel
2024-06-25T13:06:45,617   running build
2024-06-25T13:06:45,617   running build_py
2024-06-25T13:06:45,621   creating build
2024-06-25T13:06:45,622   creating build/lib
2024-06-25T13:06:45,623   creating build/lib/nnunetv2
2024-06-25T13:06:45,624   copying nnunetv2/configuration.py -> build/lib/nnunetv2
2024-06-25T13:06:45,626   copying nnunetv2/paths.py -> build/lib/nnunetv2
2024-06-25T13:06:45,628   copying nnunetv2/__init__.py -> build/lib/nnunetv2
2024-06-25T13:06:45,630   creating build/lib/documentation
2024-06-25T13:06:45,631   copying documentation/__init__.py -> build/lib/documentation
2024-06-25T13:06:45,633   creating build/lib/nnunetv2/utilities
2024-06-25T13:06:45,634   copying nnunetv2/utilities/helpers.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,636   copying nnunetv2/utilities/overlay_plots.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,638   copying nnunetv2/utilities/file_path_utilities.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,641   copying nnunetv2/utilities/dataset_name_id_conversion.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,643   copying nnunetv2/utilities/utils.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,644   copying nnunetv2/utilities/ddp_allgather.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,646   copying nnunetv2/utilities/default_n_proc_DA.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,648   copying nnunetv2/utilities/json_export.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,650   copying nnunetv2/utilities/find_class_by_name.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,651   copying nnunetv2/utilities/crossval_split.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,653   copying nnunetv2/utilities/collate_outputs.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,655   copying nnunetv2/utilities/__init__.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,656   copying nnunetv2/utilities/get_network_from_plans.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,658   copying nnunetv2/utilities/network_initialization.py -> build/lib/nnunetv2/utilities
2024-06-25T13:06:45,661   creating build/lib/nnunetv2/tests
2024-06-25T13:06:45,662   copying nnunetv2/tests/__init__.py -> build/lib/nnunetv2/tests
2024-06-25T13:06:45,664   creating build/lib/nnunetv2/evaluation
2024-06-25T13:06:45,665   copying nnunetv2/evaluation/accumulate_cv_results.py -> build/lib/nnunetv2/evaluation
2024-06-25T13:06:45,667   copying nnunetv2/evaluation/__init__.py -> build/lib/nnunetv2/evaluation
2024-06-25T13:06:45,668   copying nnunetv2/evaluation/evaluate_predictions.py -> build/lib/nnunetv2/evaluation
2024-06-25T13:06:45,671   copying nnunetv2/evaluation/find_best_configuration.py -> build/lib/nnunetv2/evaluation
2024-06-25T13:06:45,674   creating build/lib/nnunetv2/postprocessing
2024-06-25T13:06:45,675   copying nnunetv2/postprocessing/__init__.py -> build/lib/nnunetv2/postprocessing
2024-06-25T13:06:45,676   copying nnunetv2/postprocessing/remove_connected_components.py -> build/lib/nnunetv2/postprocessing
2024-06-25T13:06:45,679   creating build/lib/nnunetv2/run
2024-06-25T13:06:45,680   copying nnunetv2/run/load_pretrained_weights.py -> build/lib/nnunetv2/run
2024-06-25T13:06:45,682   copying nnunetv2/run/__init__.py -> build/lib/nnunetv2/run
2024-06-25T13:06:45,683   copying nnunetv2/run/run_training.py -> build/lib/nnunetv2/run
2024-06-25T13:06:45,686   creating build/lib/nnunetv2/training
2024-06-25T13:06:45,687   copying nnunetv2/training/__init__.py -> build/lib/nnunetv2/training
2024-06-25T13:06:45,689   creating build/lib/nnunetv2/ensembling
2024-06-25T13:06:45,690   copying nnunetv2/ensembling/__init__.py -> build/lib/nnunetv2/ensembling
2024-06-25T13:06:45,692   copying nnunetv2/ensembling/ensemble.py -> build/lib/nnunetv2/ensembling
2024-06-25T13:06:45,695   creating build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,696   copying nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,698   copying nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,699   copying nnunetv2/dataset_conversion/Dataset043_BraTS19.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,702   copying nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,704   copying nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,706   copying nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,708   copying nnunetv2/dataset_conversion/Dataset042_BraTS18.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,710   copying nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,712   copying nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,714   copying nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,716   copying nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,718   copying nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,720   copying nnunetv2/dataset_conversion/__init__.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,721   copying nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,723   copying nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,725   copying nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,727   copying nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,729   copying nnunetv2/dataset_conversion/generate_dataset_json.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,731   copying nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/lib/nnunetv2/dataset_conversion
2024-06-25T13:06:45,734   creating build/lib/nnunetv2/batch_running
2024-06-25T13:06:45,735   copying nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py -> build/lib/nnunetv2/batch_running
2024-06-25T13:06:45,736   copying nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/lib/nnunetv2/batch_running
2024-06-25T13:06:45,739   copying nnunetv2/batch_running/__init__.py -> build/lib/nnunetv2/batch_running
2024-06-25T13:06:45,740   copying nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/lib/nnunetv2/batch_running
2024-06-25T13:06:45,743   creating build/lib/nnunetv2/preprocessing
2024-06-25T13:06:45,744   copying nnunetv2/preprocessing/__init__.py -> build/lib/nnunetv2/preprocessing
2024-06-25T13:06:45,746   creating build/lib/nnunetv2/inference
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2024-06-25T13:06:45,749   copying nnunetv2/inference/data_iterators.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,752   copying nnunetv2/inference/__init__.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,753   copying nnunetv2/inference/predict_from_raw_data.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,756   copying nnunetv2/inference/examples.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,758   copying nnunetv2/inference/sliding_window_prediction.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,760   copying nnunetv2/inference/export_prediction.py -> build/lib/nnunetv2/inference
2024-06-25T13:06:45,763   creating build/lib/nnunetv2/imageio
2024-06-25T13:06:45,764   copying nnunetv2/imageio/nibabel_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,766   copying nnunetv2/imageio/base_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,769   copying nnunetv2/imageio/tif_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,771   copying nnunetv2/imageio/natural_image_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,772   copying nnunetv2/imageio/reader_writer_registry.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,774   copying nnunetv2/imageio/__init__.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,776   copying nnunetv2/imageio/simpleitk_reader_writer.py -> build/lib/nnunetv2/imageio
2024-06-25T13:06:45,779   creating build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,780   copying nnunetv2/model_sharing/model_export.py -> build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,782   copying nnunetv2/model_sharing/model_download.py -> build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,784   copying nnunetv2/model_sharing/__init__.py -> build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,785   copying nnunetv2/model_sharing/model_import.py -> build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,787   copying nnunetv2/model_sharing/entry_points.py -> build/lib/nnunetv2/model_sharing
2024-06-25T13:06:45,789   creating build/lib/nnunetv2/experiment_planning
2024-06-25T13:06:45,790   copying nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/lib/nnunetv2/experiment_planning
2024-06-25T13:06:45,793   copying nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/lib/nnunetv2/experiment_planning
2024-06-25T13:06:45,795   copying nnunetv2/experiment_planning/__init__.py -> build/lib/nnunetv2/experiment_planning
2024-06-25T13:06:45,797   copying nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/lib/nnunetv2/experiment_planning
2024-06-25T13:06:45,799   creating build/lib/nnunetv2/utilities/label_handling
2024-06-25T13:06:45,800   copying nnunetv2/utilities/label_handling/label_handling.py -> build/lib/nnunetv2/utilities/label_handling
2024-06-25T13:06:45,803   copying nnunetv2/utilities/label_handling/__init__.py -> build/lib/nnunetv2/utilities/label_handling
2024-06-25T13:06:45,805   creating build/lib/nnunetv2/utilities/plans_handling
2024-06-25T13:06:45,806   copying nnunetv2/utilities/plans_handling/plans_handler.py -> build/lib/nnunetv2/utilities/plans_handling
2024-06-25T13:06:45,808   copying nnunetv2/utilities/plans_handling/__init__.py -> build/lib/nnunetv2/utilities/plans_handling
2024-06-25T13:06:45,810   creating build/lib/nnunetv2/tests/integration_tests
2024-06-25T13:06:45,811   copying nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-25T13:06:45,813   copying nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-25T13:06:45,815   copying nnunetv2/tests/integration_tests/__init__.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-25T13:06:45,816   copying nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/lib/nnunetv2/tests/integration_tests
2024-06-25T13:06:45,819   creating build/lib/nnunetv2/training/logging
2024-06-25T13:06:45,819   copying nnunetv2/training/logging/__init__.py -> build/lib/nnunetv2/training/logging
2024-06-25T13:06:45,821   copying nnunetv2/training/logging/nnunet_logger.py -> build/lib/nnunetv2/training/logging
2024-06-25T13:06:45,828   creating build/lib/nnunetv2/training/lr_scheduler
2024-06-25T13:06:45,829   copying nnunetv2/training/lr_scheduler/polylr.py -> build/lib/nnunetv2/training/lr_scheduler
2024-06-25T13:06:45,831   copying nnunetv2/training/lr_scheduler/__init__.py -> build/lib/nnunetv2/training/lr_scheduler
2024-06-25T13:06:45,832   creating build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,833   copying nnunetv2/training/loss/dice.py -> build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,836   copying nnunetv2/training/loss/robust_ce_loss.py -> build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,838   copying nnunetv2/training/loss/compound_losses.py -> build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,840   copying nnunetv2/training/loss/__init__.py -> build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,841   copying nnunetv2/training/loss/deep_supervision.py -> build/lib/nnunetv2/training/loss
2024-06-25T13:06:45,843   creating build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,844   copying nnunetv2/training/dataloading/utils.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,846   copying nnunetv2/training/dataloading/base_data_loader.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,848   copying nnunetv2/training/dataloading/data_loader_3d.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,850   copying nnunetv2/training/dataloading/data_loader_2d.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,853   copying nnunetv2/training/dataloading/__init__.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,854   copying nnunetv2/training/dataloading/nnunet_dataset.py -> build/lib/nnunetv2/training/dataloading
2024-06-25T13:06:45,857   creating build/lib/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:45,858   copying nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/lib/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:45,861   copying nnunetv2/training/nnUNetTrainer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:45,863   creating build/lib/nnunetv2/training/data_augmentation
2024-06-25T13:06:45,864   copying nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/lib/nnunetv2/training/data_augmentation
2024-06-25T13:06:45,866   copying nnunetv2/training/data_augmentation/__init__.py -> build/lib/nnunetv2/training/data_augmentation
2024-06-25T13:06:45,868   creating build/lib/nnunetv2/training/nnUNetTrainer/variants
2024-06-25T13:06:45,869   copying nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants
2024-06-25T13:06:45,870   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:45,871   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:45,873   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:45,875   copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:45,877   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:45,878   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:45,880   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:45,882   copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:45,884   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:45,884   copying nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:45,887   copying nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:45,889   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:45,890   copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:45,891   copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:45,893   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:45,894   copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:45,896   copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:45,898   copying nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:45,900   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:45,901   copying nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:45,903   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:45,905   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:45,906   copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:45,909   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:45,910   copying nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:45,912   copying nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:45,914   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:45,915   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:45,917   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:45,918   copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:45,921   creating build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,922   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,924   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,926   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,928   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,930   copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:45,933   creating build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,934   copying nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,936   copying nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,937   copying nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,939   copying nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,941   copying nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,943   copying nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:45,945   creating build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,946   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,948   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,949   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,950   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,952   copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:45,955   creating build/lib/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:45,956   copying nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:45,957   copying nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:45,959   copying nnunetv2/batch_running/benchmarking/__init__.py -> build/lib/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:45,961   creating build/lib/nnunetv2/batch_running/release_trainings
2024-06-25T13:06:45,962   copying nnunetv2/batch_running/release_trainings/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings
2024-06-25T13:06:45,964   creating build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:45,965   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:45,967   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:45,969   copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:45,971   creating build/lib/nnunetv2/preprocessing/normalization
2024-06-25T13:06:45,972   copying nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-25T13:06:45,973   copying nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-25T13:06:45,975   copying nnunetv2/preprocessing/normalization/__init__.py -> build/lib/nnunetv2/preprocessing/normalization
2024-06-25T13:06:45,977   creating build/lib/nnunetv2/preprocessing/cropping
2024-06-25T13:06:45,978   copying nnunetv2/preprocessing/cropping/cropping.py -> build/lib/nnunetv2/preprocessing/cropping
2024-06-25T13:06:45,979   copying nnunetv2/preprocessing/cropping/__init__.py -> build/lib/nnunetv2/preprocessing/cropping
2024-06-25T13:06:45,982   creating build/lib/nnunetv2/preprocessing/resampling
2024-06-25T13:06:45,983   copying nnunetv2/preprocessing/resampling/utils.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-25T13:06:45,985   copying nnunetv2/preprocessing/resampling/__init__.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-25T13:06:45,986   copying nnunetv2/preprocessing/resampling/default_resampling.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-25T13:06:45,988   copying nnunetv2/preprocessing/resampling/resample_torch.py -> build/lib/nnunetv2/preprocessing/resampling
2024-06-25T13:06:45,991   creating build/lib/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:45,992   copying nnunetv2/preprocessing/preprocessors/__init__.py -> build/lib/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:45,993   copying nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/lib/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:45,996   creating build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:45,997   copying nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:45,999   copying nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:46,001   creating build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,002   copying nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,005   copying nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,006   copying nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,008   copying nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,011   creating build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,012   copying nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,014   copying nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,016   creating build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,017   copying nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,019   copying nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,022   creating build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,023   copying nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,025   copying nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py -> build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,027   running egg_info
2024-06-25T13:06:46,030   writing nnunetv2_bm_custom.egg-info/PKG-INFO
2024-06-25T13:06:46,035   writing dependency_links to nnunetv2_bm_custom.egg-info/dependency_links.txt
2024-06-25T13:06:46,037   writing entry points to nnunetv2_bm_custom.egg-info/entry_points.txt
2024-06-25T13:06:46,039   writing requirements to nnunetv2_bm_custom.egg-info/requires.txt
2024-06-25T13:06:46,040   writing top-level names to nnunetv2_bm_custom.egg-info/top_level.txt
2024-06-25T13:06:46,085   reading manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:46,090   adding license file 'LICENSE'
2024-06-25T13:06:46,100   writing manifest file 'nnunetv2_bm_custom.egg-info/SOURCES.txt'
2024-06-25T13:06:46,144   installing to build/bdist.linux-armv7l/wheel
2024-06-25T13:06:46,145   running install
2024-06-25T13:06:46,169   running install_lib
2024-06-25T13:06:46,172   creating build/bdist.linux-armv7l
2024-06-25T13:06:46,173   creating build/bdist.linux-armv7l/wheel
2024-06-25T13:06:46,174   creating build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-25T13:06:46,176   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,177   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-25T13:06:46,178   copying build/lib/nnunetv2/utilities/label_handling/label_handling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-25T13:06:46,181   copying build/lib/nnunetv2/utilities/label_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling
2024-06-25T13:06:46,183   copying build/lib/nnunetv2/utilities/helpers.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,184   copying build/lib/nnunetv2/utilities/overlay_plots.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,187   copying build/lib/nnunetv2/utilities/file_path_utilities.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,189   copying build/lib/nnunetv2/utilities/dataset_name_id_conversion.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,192   copying build/lib/nnunetv2/utilities/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,193   copying build/lib/nnunetv2/utilities/ddp_allgather.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,196   copying build/lib/nnunetv2/utilities/default_n_proc_DA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,197   copying build/lib/nnunetv2/utilities/json_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,200   creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-25T13:06:46,201   copying build/lib/nnunetv2/utilities/plans_handling/plans_handler.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-25T13:06:46,203   copying build/lib/nnunetv2/utilities/plans_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling
2024-06-25T13:06:46,205   copying build/lib/nnunetv2/utilities/find_class_by_name.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,207   copying build/lib/nnunetv2/utilities/crossval_split.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,210   copying build/lib/nnunetv2/utilities/collate_outputs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,211   copying build/lib/nnunetv2/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,213   copying build/lib/nnunetv2/utilities/get_network_from_plans.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,215   copying build/lib/nnunetv2/utilities/network_initialization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities
2024-06-25T13:06:46,217   creating build/bdist.linux-armv7l/wheel/nnunetv2/tests
2024-06-25T13:06:46,219   creating build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-25T13:06:46,220   copying build/lib/nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-25T13:06:46,222   copying build/lib/nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-25T13:06:46,224   copying build/lib/nnunetv2/tests/integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-25T13:06:46,226   copying build/lib/nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests
2024-06-25T13:06:46,228   copying build/lib/nnunetv2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests
2024-06-25T13:06:46,229   copying build/lib/nnunetv2/configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-25T13:06:46,231   creating build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-25T13:06:46,232   copying build/lib/nnunetv2/evaluation/accumulate_cv_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-25T13:06:46,234   copying build/lib/nnunetv2/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-25T13:06:46,236   copying build/lib/nnunetv2/evaluation/evaluate_predictions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-25T13:06:46,238   copying build/lib/nnunetv2/evaluation/find_best_configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation
2024-06-25T13:06:46,241   creating build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-25T13:06:46,242   copying build/lib/nnunetv2/postprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-25T13:06:46,244   copying build/lib/nnunetv2/postprocessing/remove_connected_components.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing
2024-06-25T13:06:46,247   creating build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-25T13:06:46,248   copying build/lib/nnunetv2/run/load_pretrained_weights.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-25T13:06:46,250   copying build/lib/nnunetv2/run/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-25T13:06:46,252   copying build/lib/nnunetv2/run/run_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run
2024-06-25T13:06:46,254   copying build/lib/nnunetv2/paths.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-25T13:06:46,257   creating build/bdist.linux-armv7l/wheel/nnunetv2/training
2024-06-25T13:06:46,258   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-25T13:06:46,259   copying build/lib/nnunetv2/training/logging/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-25T13:06:46,261   copying build/lib/nnunetv2/training/logging/nnunet_logger.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging
2024-06-25T13:06:46,264   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-25T13:06:46,265   copying build/lib/nnunetv2/training/lr_scheduler/polylr.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-25T13:06:46,267   copying build/lib/nnunetv2/training/lr_scheduler/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler
2024-06-25T13:06:46,269   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,271   copying build/lib/nnunetv2/training/loss/dice.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,273   copying build/lib/nnunetv2/training/loss/robust_ce_loss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,275   copying build/lib/nnunetv2/training/loss/compound_losses.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,277   copying build/lib/nnunetv2/training/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,279   copying build/lib/nnunetv2/training/loss/deep_supervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss
2024-06-25T13:06:46,281   copying build/lib/nnunetv2/training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training
2024-06-25T13:06:46,283   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,284   copying build/lib/nnunetv2/training/dataloading/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,285   copying build/lib/nnunetv2/training/dataloading/base_data_loader.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,288   copying build/lib/nnunetv2/training/dataloading/data_loader_3d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,290   copying build/lib/nnunetv2/training/dataloading/data_loader_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,293   copying build/lib/nnunetv2/training/dataloading/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,295   copying build/lib/nnunetv2/training/dataloading/nnunet_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading
2024-06-25T13:06:46,298   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:46,299   copying build/lib/nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:46,303   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants
2024-06-25T13:06:46,305   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:46,306   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:46,309   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:46,311   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking
2024-06-25T13:06:46,313   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:46,315   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:46,317   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:46,320   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture
2024-06-25T13:06:46,322   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:46,323   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:46,326   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling
2024-06-25T13:06:46,328   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:46,329   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:46,332   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule
2024-06-25T13:06:46,334   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:46,336   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:46,338   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:46,341   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length
2024-06-25T13:06:46,343   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:46,344   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:46,345   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:46,348   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:46,350   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss
2024-06-25T13:06:46,352   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants
2024-06-25T13:06:46,354   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:46,355   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:46,357   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/custom
2024-06-25T13:06:46,359   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:46,360   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:46,362   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:46,364   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer
2024-06-25T13:06:46,366   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,367   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,370   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,372   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,374   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,376   copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation
2024-06-25T13:06:46,378   copying build/lib/nnunetv2/training/nnUNetTrainer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer
2024-06-25T13:06:46,380   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-25T13:06:46,382   creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,382   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,385   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,387   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,389   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,392   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,395   copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms
2024-06-25T13:06:46,397   copying build/lib/nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-25T13:06:46,399   copying build/lib/nnunetv2/training/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation
2024-06-25T13:06:46,401   creating build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-25T13:06:46,402   copying build/lib/nnunetv2/ensembling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-25T13:06:46,404   copying build/lib/nnunetv2/ensembling/ensemble.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling
2024-06-25T13:06:46,408   creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,409   copying build/lib/nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,411   copying build/lib/nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,413   copying build/lib/nnunetv2/dataset_conversion/Dataset043_BraTS19.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,417   creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,418   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,420   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,423   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,424   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,426   copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests
2024-06-25T13:06:46,429   copying build/lib/nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,431   copying build/lib/nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,433   copying build/lib/nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,436   copying build/lib/nnunetv2/dataset_conversion/Dataset042_BraTS18.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,438   copying build/lib/nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,441   copying build/lib/nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,443   copying build/lib/nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,445   copying build/lib/nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,448   copying build/lib/nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,450   copying build/lib/nnunetv2/dataset_conversion/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,452   copying build/lib/nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,454   copying build/lib/nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,456   copying build/lib/nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,458   copying build/lib/nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,461   copying build/lib/nnunetv2/dataset_conversion/generate_dataset_json.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,463   copying build/lib/nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion
2024-06-25T13:06:46,466   copying build/lib/nnunetv2/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2
2024-06-25T13:06:46,468   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-25T13:06:46,469   copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-25T13:06:46,472   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:46,473   copying build/lib/nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:46,476   copying build/lib/nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:46,478   copying build/lib/nnunetv2/batch_running/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking
2024-06-25T13:06:46,480   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings
2024-06-25T13:06:46,481   copying build/lib/nnunetv2/batch_running/release_trainings/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings
2024-06-25T13:06:46,484   creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:46,485   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:46,487   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:46,489   copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1
2024-06-25T13:06:46,490   copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-25T13:06:46,493   copying build/lib/nnunetv2/batch_running/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-25T13:06:46,495   copying build/lib/nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running
2024-06-25T13:06:46,497   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing
2024-06-25T13:06:46,498   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-25T13:06:46,499   copying build/lib/nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-25T13:06:46,502   copying build/lib/nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-25T13:06:46,504   copying build/lib/nnunetv2/preprocessing/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization
2024-06-25T13:06:46,506   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-25T13:06:46,507   copying build/lib/nnunetv2/preprocessing/cropping/cropping.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-25T13:06:46,509   copying build/lib/nnunetv2/preprocessing/cropping/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping
2024-06-25T13:06:46,511   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-25T13:06:46,512   copying build/lib/nnunetv2/preprocessing/resampling/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-25T13:06:46,514   copying build/lib/nnunetv2/preprocessing/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-25T13:06:46,515   copying build/lib/nnunetv2/preprocessing/resampling/default_resampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-25T13:06:46,517   copying build/lib/nnunetv2/preprocessing/resampling/resample_torch.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling
2024-06-25T13:06:46,520   copying build/lib/nnunetv2/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing
2024-06-25T13:06:46,522   creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:46,523   copying build/lib/nnunetv2/preprocessing/preprocessors/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:46,524   copying build/lib/nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors
2024-06-25T13:06:46,528   creating build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,529   copying build/lib/nnunetv2/inference/JHU_inference.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,531   copying build/lib/nnunetv2/inference/data_iterators.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,533   copying build/lib/nnunetv2/inference/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,535   copying build/lib/nnunetv2/inference/predict_from_raw_data.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,538   copying build/lib/nnunetv2/inference/examples.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,540   copying build/lib/nnunetv2/inference/sliding_window_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,542   copying build/lib/nnunetv2/inference/export_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference
2024-06-25T13:06:46,544   creating build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,545   copying build/lib/nnunetv2/imageio/nibabel_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,548   copying build/lib/nnunetv2/imageio/base_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,550   copying build/lib/nnunetv2/imageio/tif_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,552   copying build/lib/nnunetv2/imageio/natural_image_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,554   copying build/lib/nnunetv2/imageio/reader_writer_registry.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,556   copying build/lib/nnunetv2/imageio/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,558   copying build/lib/nnunetv2/imageio/simpleitk_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio
2024-06-25T13:06:46,560   creating build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,561   copying build/lib/nnunetv2/model_sharing/model_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,564   copying build/lib/nnunetv2/model_sharing/model_download.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,565   copying build/lib/nnunetv2/model_sharing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,567   copying build/lib/nnunetv2/model_sharing/model_import.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,569   copying build/lib/nnunetv2/model_sharing/entry_points.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing
2024-06-25T13:06:46,571   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-25T13:06:46,573   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:46,574   copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:46,577   copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining
2024-06-25T13:06:46,579   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,579   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,583   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,584   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,586   copying build/lib/nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/resampling
2024-06-25T13:06:46,588   copying build/lib/nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,590   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,592   copying build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,593   copying build/lib/nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners/residual_unets
2024-06-25T13:06:46,596   copying build/lib/nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,597   copying build/lib/nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners
2024-06-25T13:06:46,601   creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,602   copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,605   copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint
2024-06-25T13:06:46,606   copying build/lib/nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-25T13:06:46,608   copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-25T13:06:46,611   copying build/lib/nnunetv2/experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-25T13:06:46,613   copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning
2024-06-25T13:06:46,616   creating build/bdist.linux-armv7l/wheel/documentation
2024-06-25T13:06:46,617   copying build/lib/documentation/__init__.py -> build/bdist.linux-armv7l/wheel/documentation
2024-06-25T13:06:46,618   running install_egg_info
2024-06-25T13:06:46,622   Copying nnunetv2_bm_custom.egg-info to build/bdist.linux-armv7l/wheel/nnunetv2_bm_custom-2.5.2-py3.11.egg-info
2024-06-25T13:06:46,635   running install_scripts
2024-06-25T13:06:46,658   creating build/bdist.linux-armv7l/wheel/nnunetv2_bm_custom-2.5.2.dist-info/WHEEL
2024-06-25T13:06:46,660   creating '/tmp/pip-wheel-w1hydb5g/.tmp-dthvz9ru/nnunetv2_bm_custom-2.5.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-06-25T13:06:46,662   adding 'documentation/__init__.py'
2024-06-25T13:06:46,664   adding 'nnunetv2/__init__.py'
2024-06-25T13:06:46,665   adding 'nnunetv2/configuration.py'
2024-06-25T13:06:46,667   adding 'nnunetv2/paths.py'
2024-06-25T13:06:46,668   adding 'nnunetv2/batch_running/__init__.py'
2024-06-25T13:06:46,670   adding 'nnunetv2/batch_running/collect_results_custom_Decathlon.py'
2024-06-25T13:06:46,671   adding 'nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py'
2024-06-25T13:06:46,673   adding 'nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py'
2024-06-25T13:06:46,675   adding 'nnunetv2/batch_running/benchmarking/__init__.py'
2024-06-25T13:06:46,676   adding 'nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py'
2024-06-25T13:06:46,678   adding 'nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py'
2024-06-25T13:06:46,679   adding 'nnunetv2/batch_running/release_trainings/__init__.py'
2024-06-25T13:06:46,681   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py'
2024-06-25T13:06:46,682   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py'
2024-06-25T13:06:46,683   adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py'
2024-06-25T13:06:46,686   adding 'nnunetv2/dataset_conversion/Dataset027_ACDC.py'
2024-06-25T13:06:46,687   adding 'nnunetv2/dataset_conversion/Dataset042_BraTS18.py'
2024-06-25T13:06:46,688   adding 'nnunetv2/dataset_conversion/Dataset043_BraTS19.py'
2024-06-25T13:06:46,690   adding 'nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py'
2024-06-25T13:06:46,691   adding 'nnunetv2/dataset_conversion/Dataset114_MNMs.py'
2024-06-25T13:06:46,693   adding 'nnunetv2/dataset_conversion/Dataset115_EMIDEC.py'
2024-06-25T13:06:46,694   adding 'nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py'
2024-06-25T13:06:46,696   adding 'nnunetv2/dataset_conversion/Dataset137_BraTS21.py'
2024-06-25T13:06:46,697   adding 'nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py'
2024-06-25T13:06:46,699   adding 'nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py'
2024-06-25T13:06:46,700   adding 'nnunetv2/dataset_conversion/Dataset220_KiTS2023.py'
2024-06-25T13:06:46,701   adding 'nnunetv2/dataset_conversion/Dataset221_AutoPETII_2023.py'
2024-06-25T13:06:46,702   adding 'nnunetv2/dataset_conversion/Dataset223_AMOS2022postChallenge.py'
2024-06-25T13:06:46,704   adding 'nnunetv2/dataset_conversion/Dataset224_AbdomenAtlas1.0.py'
2024-06-25T13:06:46,705   adding 'nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py'
2024-06-25T13:06:46,706   adding 'nnunetv2/dataset_conversion/__init__.py'
2024-06-25T13:06:46,708   adding 'nnunetv2/dataset_conversion/convert_MSD_dataset.py'
2024-06-25T13:06:46,709   adding 'nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py'
2024-06-25T13:06:46,711   adding 'nnunetv2/dataset_conversion/generate_dataset_json.py'
2024-06-25T13:06:46,713   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py'
2024-06-25T13:06:46,714   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py'
2024-06-25T13:06:46,715   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py'
2024-06-25T13:06:46,717   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py'
2024-06-25T13:06:46,718   adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py'
2024-06-25T13:06:46,719   adding 'nnunetv2/ensembling/__init__.py'
2024-06-25T13:06:46,721   adding 'nnunetv2/ensembling/ensemble.py'
2024-06-25T13:06:46,723   adding 'nnunetv2/evaluation/__init__.py'
2024-06-25T13:06:46,724   adding 'nnunetv2/evaluation/accumulate_cv_results.py'
2024-06-25T13:06:46,726   adding 'nnunetv2/evaluation/evaluate_predictions.py'
2024-06-25T13:06:46,729   adding 'nnunetv2/evaluation/find_best_configuration.py'
2024-06-25T13:06:46,730   adding 'nnunetv2/experiment_planning/__init__.py'
2024-06-25T13:06:46,732   adding 'nnunetv2/experiment_planning/plan_and_preprocess_api.py'
2024-06-25T13:06:46,734   adding 'nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py'
2024-06-25T13:06:46,736   adding 'nnunetv2/experiment_planning/verify_dataset_integrity.py'
2024-06-25T13:06:46,738   adding 'nnunetv2/experiment_planning/dataset_fingerprint/__init__.py'
2024-06-25T13:06:46,740   adding 'nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py'
2024-06-25T13:06:46,742   adding 'nnunetv2/experiment_planning/experiment_planners/__init__.py'
2024-06-25T13:06:46,746   adding 'nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py'
2024-06-25T13:06:46,748   adding 'nnunetv2/experiment_planning/experiment_planners/network_topology.py'
2024-06-25T13:06:46,749   adding 'nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py'
2024-06-25T13:06:46,751   adding 'nnunetv2/experiment_planning/experiment_planners/resampling/__init__.py'
2024-06-25T13:06:46,753   adding 'nnunetv2/experiment_planning/experiment_planners/resampling/resample_with_torch.py'
2024-06-25T13:06:46,754   adding 'nnunetv2/experiment_planning/experiment_planners/residual_unets/__init__.py'
2024-06-25T13:06:46,757   adding 'nnunetv2/experiment_planning/experiment_planners/residual_unets/residual_encoder_unet_planners.py'
2024-06-25T13:06:46,758   adding 'nnunetv2/experiment_planning/plans_for_pretraining/__init__.py'
2024-06-25T13:06:46,760   adding 'nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py'
2024-06-25T13:06:46,761   adding 'nnunetv2/imageio/__init__.py'
2024-06-25T13:06:46,763   adding 'nnunetv2/imageio/base_reader_writer.py'
2024-06-25T13:06:46,764   adding 'nnunetv2/imageio/natural_image_reader_writer.py'
2024-06-25T13:06:46,766   adding 'nnunetv2/imageio/nibabel_reader_writer.py'
2024-06-25T13:06:46,768   adding 'nnunetv2/imageio/reader_writer_registry.py'
2024-06-25T13:06:46,769   adding 'nnunetv2/imageio/simpleitk_reader_writer.py'
2024-06-25T13:06:46,770   adding 'nnunetv2/imageio/tif_reader_writer.py'
2024-06-25T13:06:46,773   adding 'nnunetv2/inference/JHU_inference.py'
2024-06-25T13:06:46,774   adding 'nnunetv2/inference/__init__.py'
2024-06-25T13:06:46,776   adding 'nnunetv2/inference/data_iterators.py'
2024-06-25T13:06:46,777   adding 'nnunetv2/inference/examples.py'
2024-06-25T13:06:46,779   adding 'nnunetv2/inference/export_prediction.py'
2024-06-25T13:06:46,784   adding 'nnunetv2/inference/predict_from_raw_data.py'
2024-06-25T13:06:46,786   adding 'nnunetv2/inference/sliding_window_prediction.py'
2024-06-25T13:06:46,787   adding 'nnunetv2/model_sharing/__init__.py'
2024-06-25T13:06:46,789   adding 'nnunetv2/model_sharing/entry_points.py'
2024-06-25T13:06:46,790   adding 'nnunetv2/model_sharing/model_download.py'
2024-06-25T13:06:46,792   adding 'nnunetv2/model_sharing/model_export.py'
2024-06-25T13:06:46,793   adding 'nnunetv2/model_sharing/model_import.py'
2024-06-25T13:06:46,794   adding 'nnunetv2/postprocessing/__init__.py'
2024-06-25T13:06:46,797   adding 'nnunetv2/postprocessing/remove_connected_components.py'
2024-06-25T13:06:46,799   adding 'nnunetv2/preprocessing/__init__.py'
2024-06-25T13:06:46,801   adding 'nnunetv2/preprocessing/cropping/__init__.py'
2024-06-25T13:06:46,802   adding 'nnunetv2/preprocessing/cropping/cropping.py'
2024-06-25T13:06:46,803   adding 'nnunetv2/preprocessing/normalization/__init__.py'
2024-06-25T13:06:46,805   adding 'nnunetv2/preprocessing/normalization/default_normalization_schemes.py'
2024-06-25T13:06:46,806   adding 'nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py'
2024-06-25T13:06:46,808   adding 'nnunetv2/preprocessing/preprocessors/__init__.py'
2024-06-25T13:06:46,810   adding 'nnunetv2/preprocessing/preprocessors/default_preprocessor.py'
2024-06-25T13:06:46,817   adding 'nnunetv2/preprocessing/resampling/__init__.py'
2024-06-25T13:06:46,818   adding 'nnunetv2/preprocessing/resampling/default_resampling.py'
2024-06-25T13:06:46,820   adding 'nnunetv2/preprocessing/resampling/resample_torch.py'
2024-06-25T13:06:46,821   adding 'nnunetv2/preprocessing/resampling/utils.py'
2024-06-25T13:06:46,823   adding 'nnunetv2/run/__init__.py'
2024-06-25T13:06:46,825   adding 'nnunetv2/run/load_pretrained_weights.py'
2024-06-25T13:06:46,827   adding 'nnunetv2/run/run_training.py'
2024-06-25T13:06:46,828   adding 'nnunetv2/tests/__init__.py'
2024-06-25T13:06:46,830   adding 'nnunetv2/tests/integration_tests/__init__.py'
2024-06-25T13:06:46,831   adding 'nnunetv2/tests/integration_tests/add_lowres_and_cascade.py'
2024-06-25T13:06:46,832   adding 'nnunetv2/tests/integration_tests/cleanup_integration_test.py'
2024-06-25T13:06:46,834   adding 'nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py'
2024-06-25T13:06:46,835   adding 'nnunetv2/training/__init__.py'
2024-06-25T13:06:46,837   adding 'nnunetv2/training/data_augmentation/__init__.py'
2024-06-25T13:06:46,838   adding 'nnunetv2/training/data_augmentation/compute_initial_patch_size.py'
2024-06-25T13:06:46,839   adding 'nnunetv2/training/data_augmentation/custom_transforms/__init__.py'
2024-06-25T13:06:46,841   adding 'nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py'
2024-06-25T13:06:46,842   adding 'nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py'
2024-06-25T13:06:46,843   adding 'nnunetv2/training/data_augmentation/custom_transforms/masking.py'
2024-06-25T13:06:46,845   adding 'nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py'
2024-06-25T13:06:46,846   adding 'nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py'
2024-06-25T13:06:46,847   adding 'nnunetv2/training/dataloading/__init__.py'
2024-06-25T13:06:46,849   adding 'nnunetv2/training/dataloading/base_data_loader.py'
2024-06-25T13:06:46,851   adding 'nnunetv2/training/dataloading/data_loader_2d.py'
2024-06-25T13:06:46,852   adding 'nnunetv2/training/dataloading/data_loader_3d.py'
2024-06-25T13:06:46,854   adding 'nnunetv2/training/dataloading/nnunet_dataset.py'
2024-06-25T13:06:46,855   adding 'nnunetv2/training/dataloading/utils.py'
2024-06-25T13:06:46,857   adding 'nnunetv2/training/logging/__init__.py'
2024-06-25T13:06:46,858   adding 'nnunetv2/training/logging/nnunet_logger.py'
2024-06-25T13:06:46,860   adding 'nnunetv2/training/loss/__init__.py'
2024-06-25T13:06:46,862   adding 'nnunetv2/training/loss/compound_losses.py'
2024-06-25T13:06:46,863   adding 'nnunetv2/training/loss/deep_supervision.py'
2024-06-25T13:06:46,865   adding 'nnunetv2/training/loss/dice.py'
2024-06-25T13:06:46,866   adding 'nnunetv2/training/loss/robust_ce_loss.py'
2024-06-25T13:06:46,868   adding 'nnunetv2/training/lr_scheduler/__init__.py'
2024-06-25T13:06:46,869   adding 'nnunetv2/training/lr_scheduler/polylr.py'
2024-06-25T13:06:46,871   adding 'nnunetv2/training/nnUNetTrainer/__init__.py'
2024-06-25T13:06:46,878   adding 'nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py'
2024-06-25T13:06:46,881   adding 'nnunetv2/training/nnUNetTrainer/variants/__init__.py'
2024-06-25T13:06:46,882   adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py'
2024-06-25T13:06:46,884   adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py'
2024-06-25T13:06:46,885   adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py'
2024-06-25T13:06:46,887   adding 'nnunetv2/training/nnUNetTrainer/variants/custom/__init__.py'
2024-06-25T13:06:46,888   adding 'nnunetv2/training/nnUNetTrainer/variants/custom/customTrainersMOSAIC.py'
2024-06-25T13:06:46,890   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py'
2024-06-25T13:06:46,893   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py'
2024-06-25T13:06:46,895   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py'
2024-06-25T13:06:46,897   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py'
2024-06-25T13:06:46,899   adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py'
2024-06-25T13:06:46,900   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py'
2024-06-25T13:06:46,901   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py'
2024-06-25T13:06:46,903   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py'
2024-06-25T13:06:46,904   adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py'
2024-06-25T13:06:46,906   adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py'
2024-06-25T13:06:46,907   adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py'
2024-06-25T13:06:46,909   adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py'
2024-06-25T13:06:46,910   adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py'
2024-06-25T13:06:46,911   adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py'
2024-06-25T13:06:46,912   adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py'
2024-06-25T13:06:46,914   adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py'
2024-06-25T13:06:46,915   adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py'
2024-06-25T13:06:46,916   adding 'nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py'
2024-06-25T13:06:46,918   adding 'nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py'
2024-06-25T13:06:46,919   adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py'
2024-06-25T13:06:46,920   adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py'
2024-06-25T13:06:46,922   adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py'
2024-06-25T13:06:46,924   adding 'nnunetv2/utilities/__init__.py'
2024-06-25T13:06:46,925   adding 'nnunetv2/utilities/collate_outputs.py'
2024-06-25T13:06:46,926   adding 'nnunetv2/utilities/crossval_split.py'
2024-06-25T13:06:46,928   adding 'nnunetv2/utilities/dataset_name_id_conversion.py'
2024-06-25T13:06:46,929   adding 'nnunetv2/utilities/ddp_allgather.py'
2024-06-25T13:06:46,930   adding 'nnunetv2/utilities/default_n_proc_DA.py'
2024-06-25T13:06:46,932   adding 'nnunetv2/utilities/file_path_utilities.py'
2024-06-25T13:06:46,933   adding 'nnunetv2/utilities/find_class_by_name.py'
2024-06-25T13:06:46,934   adding 'nnunetv2/utilities/get_network_from_plans.py'
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2024-06-25T13:06:46,937   adding 'nnunetv2/utilities/json_export.py'
2024-06-25T13:06:46,938   adding 'nnunetv2/utilities/network_initialization.py'
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2024-06-25T13:06:46,951   adding 'nnunetv2_bm_custom-2.5.2.dist-info/LICENSE'
2024-06-25T13:06:46,954   adding 'nnunetv2_bm_custom-2.5.2.dist-info/METADATA'
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2024-06-25T13:06:46,967   removing build/bdist.linux-armv7l/wheel
2024-06-25T13:06:47,139   Building wheel for nnunetv2-bm-custom (pyproject.toml): finished with status 'done'
2024-06-25T13:06:47,151   Created wheel for nnunetv2-bm-custom: filename=nnunetv2_bm_custom-2.5.2-py3-none-any.whl size=262734 sha256=1d7a426eaf41833620cb972dbc8795f8b47b8eb67b782a125ec8848d02260dc8
2024-06-25T13:06:47,152   Stored in directory: /tmp/pip-ephem-wheel-cache-dmiz1l7q/wheels/0d/dd/f0/66da478e4d19e06386b29848223c426ed90750c56d8a6e420e
2024-06-25T13:06:47,177 Successfully built nnunetv2-bm-custom
2024-06-25T13:06:47,188 Removed build tracker: '/tmp/pip-build-tracker-7ax0g5qx'