2024-06-25T21:56:38,559 Created temporary directory: /tmp/pip-build-tracker-ikul0chq 2024-06-25T21:56:38,560 Initialized build tracking at /tmp/pip-build-tracker-ikul0chq 2024-06-25T21:56:38,560 Created build tracker: /tmp/pip-build-tracker-ikul0chq 2024-06-25T21:56:38,561 Entered build tracker: /tmp/pip-build-tracker-ikul0chq 2024-06-25T21:56:38,562 Created temporary directory: /tmp/pip-wheel-jkkmz7oa 2024-06-25T21:56:38,565 Created temporary directory: /tmp/pip-ephem-wheel-cache-lq70y33b 2024-06-25T21:56:38,587 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-25T21:56:38,590 2 location(s) to search for versions of checkm-genome: 2024-06-25T21:56:38,590 * https://pypi.org/simple/checkm-genome/ 2024-06-25T21:56:38,590 * https://www.piwheels.org/simple/checkm-genome/ 2024-06-25T21:56:38,591 Fetching project page and analyzing links: https://pypi.org/simple/checkm-genome/ 2024-06-25T21:56:38,592 Getting page https://pypi.org/simple/checkm-genome/ 2024-06-25T21:56:38,593 Found index url https://pypi.org/simple/ 2024-06-25T21:56:38,810 Fetched page https://pypi.org/simple/checkm-genome/ as application/vnd.pypi.simple.v1+json 2024-06-25T21:56:38,820 Found link https://files.pythonhosted.org/packages/28/18/bfa95eace6e39c78c3d59e9409a6a6bf5d6b8eb02a84fe8f1587a604cccc/checkm-genome-0.9.0.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.0 2024-06-25T21:56:38,821 Found link https://files.pythonhosted.org/packages/41/31/d1cbd54a0356a8cfabe59a3d932dc5bfc25c8a62d21e8a6c95ef5ee84a5d/checkm-genome-0.9.1.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.1 2024-06-25T21:56:38,821 Found link https://files.pythonhosted.org/packages/af/c9/61e0998688374f8155107e3e81cf8920658b72e2e97df8595beaf6dad498/checkm-genome-0.9.2.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.2 2024-06-25T21:56:38,822 Found link https://files.pythonhosted.org/packages/ae/51/c5173a5940663f1a25311584f322ccfd22148097eea896f3fe96071292a6/checkm-genome-0.9.4.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.4 2024-06-25T21:56:38,823 Found link https://files.pythonhosted.org/packages/5c/d0/884dcda6dc25ec5b1a0dfb781b67dbf4c9cfbe2ab3ef3935b3d4cbbcd0e3/checkm-genome-0.9.5.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.5 2024-06-25T21:56:38,823 Found link https://files.pythonhosted.org/packages/ec/7d/8ffd56d3ea47b908b869e7556f3ed2211bbd0f299ddb8bd34ee34c7cdfb2/checkm-genome-0.9.6.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.6 2024-06-25T21:56:38,824 Found link https://files.pythonhosted.org/packages/5f/2b/d0283c04c98b60afb23a8e4220f4c99bdb5a5a4fa08e928d1e16cefc8c65/checkm-genome-0.9.7.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 0.9.7 2024-06-25T21:56:38,825 Found link https://files.pythonhosted.org/packages/d4/0b/6b2bbcea9bb373f458ece939f7d999bbeaf47f6562f7a5b459f5b3de0ef0/checkm-genome-1.0.1.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.1 2024-06-25T21:56:38,826 Found link https://files.pythonhosted.org/packages/de/22/74f9a5f3c6716fb5df55e4ffe32addf3bf972771ee68e41d8b50f65bc45f/checkm-genome-1.0.2.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.2 2024-06-25T21:56:38,826 Found link https://files.pythonhosted.org/packages/0f/28/0c0e639dbdabf29808615ffe781675b8c8376ffc176e3ec9060c53ee99bd/checkm-genome-1.0.3.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.3 2024-06-25T21:56:38,827 Found link https://files.pythonhosted.org/packages/fe/e1/7821a08e9c5462181f4768eff196ceeab5b6cfdf40b09874cd7d42bc733d/checkm-genome-1.0.4.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.4 2024-06-25T21:56:38,828 Found link https://files.pythonhosted.org/packages/d0/17/9442a51f37f3bb6f112b3dc03a6aaaca3417ec5ade8208abbccec7906757/checkm-genome-1.0.5.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.5 2024-06-25T21:56:38,828 Found link https://files.pythonhosted.org/packages/55/62/35b519866fff020ef0b213e0665dc4d43cb1bb588a6575dd3270d3708095/checkm-genome-1.0.7.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.7 2024-06-25T21:56:38,829 Found link https://files.pythonhosted.org/packages/e7/d4/18407c20a8f220428e9b2b42c9c5768321060965d790e2861b1a3550ac21/checkm-genome-1.0.8.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.8 2024-06-25T21:56:38,830 Found link https://files.pythonhosted.org/packages/a1/22/c6ffe3f10d17857c3f7125c7c2f94c0231d764e831a55684e4698147c517/checkm-genome-1.0.10.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.10 2024-06-25T21:56:38,831 Found link https://files.pythonhosted.org/packages/da/37/38c9a10a61ed2657a798188c83674b813d90425c73091c0106b50ce18172/checkm-genome-1.0.11.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.11 2024-06-25T21:56:38,831 Found link https://files.pythonhosted.org/packages/44/cb/d6017ffa33025403c1daba046223ee3d84ea5492e99107610b970219c73c/checkm-genome-1.0.12.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.12 2024-06-25T21:56:38,832 Found link https://files.pythonhosted.org/packages/db/2f/fef9adff4fd6fd52431d307a3c1095e80076a67766e6f9bba4deb573f269/checkm-genome-1.0.13.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.13 2024-06-25T21:56:38,832 Found link https://files.pythonhosted.org/packages/36/1c/2bb5b99f1757e98d5d416cf8dcf72dc4ab4869406660967fd348e8c6b708/checkm-genome-1.0.15.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.15 2024-06-25T21:56:38,833 Found link https://files.pythonhosted.org/packages/4a/15/84fc69c6dbab4d3ca48e7a83951d74948d6eb7a6ef46dd221d16dd80927d/checkm-genome-1.0.16.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.16 2024-06-25T21:56:38,833 Found link https://files.pythonhosted.org/packages/9d/16/4bc442eeae8f320730360d75fc1f8a83ced15181efdd36611184293da840/checkm-genome-1.0.17.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.17 2024-06-25T21:56:38,834 Found link https://files.pythonhosted.org/packages/51/f0/aa0f9b3a60b2dd10a8aaf7ece78b75095a7898269489278c2f0284f1fe94/checkm-genome-1.0.18.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.0.18 2024-06-25T21:56:38,835 Found link https://files.pythonhosted.org/packages/07/29/f33ce1fdb2734cd9f44bb49b59a7b527794fad6e5cf3814c1d32eb41dcc1/checkm-genome-1.1.0.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.0 2024-06-25T21:56:38,835 Found link https://files.pythonhosted.org/packages/bd/60/1d695678bf00a952059946db6d1aaf753fee5f3c030cb97557e4f4b8d87c/checkm-genome-1.1.1.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.1 2024-06-25T21:56:38,836 Found link https://files.pythonhosted.org/packages/3d/7d/4fdd6f38fb2af3c58e0e5feb6ec0b5c86d9571f0b2f3466e176d8829923d/checkm-genome-1.1.2.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.2 2024-06-25T21:56:38,837 Found link https://files.pythonhosted.org/packages/42/91/ad3bc30ca4fd15b831b7e637d59c7fbae6279077e5a4f563dca2713be2db/checkm-genome-1.1.3.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.3 2024-06-25T21:56:38,837 Found link https://files.pythonhosted.org/packages/71/21/cfeb30104cb1af593a70bfba38475b0632dad50b77363ae85f5e190293a1/checkm-genome-1.1.4.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.4 2024-06-25T21:56:38,838 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/d6/00/f34fb4e95a3894460dd7c4be8aa842601fcbf7bb124dda310df13184a642/checkm_genome-1.1.4-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,839 Found link https://files.pythonhosted.org/packages/f8/b6/402517e75ea32bf22c7c0c33b92a394e4982d9649d130291986945798d51/checkm-genome-1.1.5.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.5 2024-06-25T21:56:38,839 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/15/11/53476838c4e9dab3439f5b2b0aa6f6712cc10ec3f92c83033a4814c57097/checkm_genome-1.1.5-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,840 Found link https://files.pythonhosted.org/packages/a3/d0/e2c6d53e2bc53b4ff2f107931287480cb411003b9823c4fc0a9bbc04a323/checkm-genome-1.1.6.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.6 2024-06-25T21:56:38,841 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/8f/6f/c2a9d242e0bd020e94ba76f9a265fc267415111b396c5a2e9afbe5c75e67/checkm_genome-1.1.6-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,841 Found link https://files.pythonhosted.org/packages/be/4d/a7597c6ffa017b83dbb61c39fd6b9397e8de01855f9a81200e2e6d08b26c/checkm-genome-1.1.7.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.7 2024-06-25T21:56:38,842 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/45/af/e2262beb87ce8b0b4413b0e11e87353dafe822e9812b3cfea79dc29c5ff0/checkm_genome-1.1.7-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,842 Found link https://files.pythonhosted.org/packages/4c/58/93eda26ab3a3d33ccc6b345effae8ba924451178906449ae45359dde29ef/checkm-genome-1.1.8.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.8 2024-06-25T21:56:38,843 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/ed/f5/c9cfb99f450ebab6995f7130bfcf067b53d8ffcbaafd8f01bca9603bee96/checkm_genome-1.1.8-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,843 Found link https://files.pythonhosted.org/packages/39/73/4e77fad2bb5c74a685c2a9f853394f8dbf2b19aaf961d38bc612dff05599/checkm-genome-1.1.9.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.9 2024-06-25T21:56:38,844 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/9c/65/f414d52ae06d32f599f1b8209dcc5a1a428287ede9cac85d4555e54c9cf7/checkm_genome-1.1.9-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,845 Found link https://files.pythonhosted.org/packages/6d/1f/b14672cc6963db24f993555d685f2d99a52b2f8f86019af5de56df89fdb4/checkm-genome-1.1.10.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.10 2024-06-25T21:56:38,845 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/a8/06/a745d2525ac86e8e73994f17a73db67cc8aea25d0940bf5d2fba01e722fc/checkm_genome-1.1.10-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,846 Found link https://files.pythonhosted.org/packages/ec/37/7ed7d421c667e15db7714b678a6867c272d41c9ae72f36387048b82de62b/checkm-genome-1.1.11.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.1.11 2024-06-25T21:56:38,847 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/50/c9/058373b8904a483e2adb0fcc5d78ea116574d2aadd7896f23309cb4b66d8/checkm_genome-1.1.11-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,847 Found link https://files.pythonhosted.org/packages/f9/5f/6160688293fbd613360e829f2e1fb6ef724f920bb7ad39347905aa648c97/checkm-genome-1.2.0.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.2.0 2024-06-25T21:56:38,848 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/6d/15/c55e56dd3779f707c8c645016186768b919df7ecec12a35cdeaf5f8d30b6/checkm_genome-1.2.0-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,848 Found link https://files.pythonhosted.org/packages/b0/03/b30dbd3892568ac8ca2ba5c3346fa8bf51e03fba42a21fa0ea162319ca99/checkm-genome-1.2.1.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.2.1 2024-06-25T21:56:38,849 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/b5/33/7d43376eb7b443dfbd88049178d2c7a9f3c638607eab957f98171ef3e3bf/checkm_genome-1.2.1-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,850 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/de/51/44d87b5ab684780a1664993723534f1463fe4482b690c1abf5afd2667ab3/checkm_genome-1.2.2-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,851 Skipping link: No binaries permitted for checkm-genome: https://files.pythonhosted.org/packages/c8/b8/80a4c31ba8a52ab915b19f266245cf367f2f15f57167fd5c095409643690/checkm_genome-1.2.3-py3-none-any.whl (from https://pypi.org/simple/checkm-genome/) 2024-06-25T21:56:38,851 Found link https://files.pythonhosted.org/packages/d3/f3/addf80c4c9d647c871fe4bb1659707d7b65c3e74caab1372be3f6dbf28ed/checkm_genome-1.2.3.tar.gz (from https://pypi.org/simple/checkm-genome/), version: 1.2.3 2024-06-25T21:56:38,852 Fetching project page and analyzing links: https://www.piwheels.org/simple/checkm-genome/ 2024-06-25T21:56:38,852 Getting page https://www.piwheels.org/simple/checkm-genome/ 2024-06-25T21:56:38,854 Found index url https://www.piwheels.org/simple/ 2024-06-25T21:56:39,009 Fetched page https://www.piwheels.org/simple/checkm-genome/ as text/html 2024-06-25T21:56:39,019 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.2.1-py3-none-any.whl#sha256=af297501476acea53ac2471d9d57d9c41eed6a2e80db1c3f9a4cf6dd73201b49 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,019 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.2.0-py3-none-any.whl#sha256=d3257520d1aba66c3066f8b1f0205bb0589942655721f22b590a07bd7e0c52d8 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,020 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.11-py3-none-any.whl#sha256=9f81ff38ae175b6f1e843c070f1ac8f86b1dcd08bd8722c912bf1d311298ac6f (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,020 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.10-py3-none-any.whl#sha256=67da7b0cf792bd04f377321cb800cfea58bb8be35cb7addc6dbbead0c52b7532 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,021 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.9-py3-none-any.whl#sha256=b88982265ff163cdfb2e706571cdf019fff36feabb538c0e0ec198b80d074435 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,022 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.8-py3-none-any.whl#sha256=efd9e5598d1533e02758e57a7dec065dd75578654a61821dc85f813b534d65e7 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,022 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.7-py3-none-any.whl#sha256=8d36ebf895c73f11d328fa95477eddaa0ed18c853b6f4e6863949aa16293107d (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,023 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.6-py3-none-any.whl#sha256=e2b1bfecc6b3df92ed34f6ac244c3c5e3c323c7bbd77b301fe2b15a0b08012ef (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,023 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.5-py3-none-any.whl#sha256=ea599c3b15b5066aa4b3c47df8958232c228b5679cce1f0972e641bb39807f88 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,024 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.4-py3-none-any.whl#sha256=92fe4afbc402171f94f7c1b48adea076305effd33d027ccc76aff07daf92ea32 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,025 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.3-py3-none-any.whl#sha256=4c0e8a1653080b4b389c284101e66dc66afe8eee2cca075a324fcd5935c463b8 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,025 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.2-py3-none-any.whl#sha256=0f98daa438be26d5cb78dddfcca6abfb41cc15919b3d4be878d6f44f2fc379eb (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,026 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.1-py3-none-any.whl#sha256=9dfd4bb385531cfcb8998838631eb0048e25076d4822cd647df3ebd6379ba97b (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,027 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.1.0-py3-none-any.whl#sha256=b5e5e0ade8b622c15f8910008d6370b3bb52503931b19aad0a1ab6376a62533a (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,027 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.18-py3-none-any.whl#sha256=2b854b3de35c510e3dd8369eaa3c3611854db40f5767ea961e8180f260a71182 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,027 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.17-py3-none-any.whl#sha256=5a457a8365a457166f7d7b0875c36674a262bc9b078d2b9670101c57ade7e398 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,028 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.16-py3-none-any.whl#sha256=6b38ccb482035f853a89a64c6a37b1f5a76c3b28f1e31ad856bb4e90d4398793 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,028 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.15-py3-none-any.whl#sha256=c8bec3cf0074f37f1f2ddd8f5eb22dd07781238972f1fd41f40a21d81f9daaa6 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,029 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.13-py3-none-any.whl#sha256=e6771b22e33f45b56afbe0d50e5e7abe429654cec051c9745b7bf27f4322bc45 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,030 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.12-py3-none-any.whl#sha256=b66e59c8ba50666b1d667508de7af03ea5fb71fa0f369aff6f2aa30148d44649 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,030 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.11-py3-none-any.whl#sha256=059d57d5ddb379898baf787fd1f040dbd794f4d7a815cd2f746785a7898e9744 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,031 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.10-py3-none-any.whl#sha256=c122049dea296391bfe446e3cf76f39a990173f33e049ca68d562e67da9dd904 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,031 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.8-py3-none-any.whl#sha256=6ffa506342dfcd2f19798610768e84b9f7ce8bd070a6f4420efa9c8a1f2bdddf (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,032 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.7-py3-none-any.whl#sha256=618cbedd9e48ede2eb636215e3d98f88531984df605c5d01a5f21d0c72f3e66c (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,032 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.5-py3-none-any.whl#sha256=48179c156bd1703e531f09bd5380401fcfc20db7cd49ccab261eea676b2fc238 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,033 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.4-py3-none-any.whl#sha256=d310a06b080b15aa24a49bfcabac26470bf5fd97ead97651d1a466920f0053c1 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,034 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.3-py3-none-any.whl#sha256=e94785a4fedb73d59993962b1e763897a4a7f77e6096f7de802352670adaca18 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,034 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.2-py3-none-any.whl#sha256=e3eebd2b31a6d49271ac1c17a28e381955ea80379b6d41bbf41fd616a8608f95 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,035 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-1.0.1-py3-none-any.whl#sha256=0894dffa2a280e3eead5fb539269f9fd1cd2e0d6c5bc2dac3de505f95d5849f8 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,035 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.7-py3-none-any.whl#sha256=47aba65eb50a67efb0ebad4c16118d0b835af57b538aabfff9babe0acda7d68e (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,036 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.6-py3-none-any.whl#sha256=d985306302851b898b7974c98e6c05c5f29b66672d933f87f013bf6ddd0a77de (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,036 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.5-py3-none-any.whl#sha256=a58a278bad70473aae825295218d4161b80c04d3d741159a329a30561e6169db (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,036 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.4-py3-none-any.whl#sha256=3756f82037a7836255e1f78b5acdfffdcccde5e0e41493bbfdd85f90e0b6a84e (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,037 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.2-py3-none-any.whl#sha256=f88283bb4531c3f2a3e2b279906ed5faebadb3bcfe46044c9d964d52cbf3ee44 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,038 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.1-py3-none-any.whl#sha256=ba77df56fab38368ca9a0be40e0e4a4d8f1f2f4030bee8e24cea9acd3da364c7 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,038 Skipping link: No binaries permitted for checkm-genome: https://www.piwheels.org/simple/checkm-genome/checkm_genome-0.9.0-py3-none-any.whl#sha256=3e190d470a84b4f698bcdc5ee3cb5f4c072a8133ec54e88e242712889e3beca0 (from https://www.piwheels.org/simple/checkm-genome/) 2024-06-25T21:56:39,039 Skipping link: not a file: https://www.piwheels.org/simple/checkm-genome/ 2024-06-25T21:56:39,039 Skipping link: not a file: https://pypi.org/simple/checkm-genome/ 2024-06-25T21:56:39,063 Given no hashes to check 1 links for project 'checkm-genome': discarding no candidates 2024-06-25T21:56:39,083 Collecting checkm-genome==1.2.3 2024-06-25T21:56:39,085 Created temporary directory: /tmp/pip-unpack-iz53c6b5 2024-06-25T21:56:39,303 Downloading checkm_genome-1.2.3.tar.gz (921 kB) 2024-06-25T21:56:39,743 Added checkm-genome==1.2.3 from https://files.pythonhosted.org/packages/d3/f3/addf80c4c9d647c871fe4bb1659707d7b65c3e74caab1372be3f6dbf28ed/checkm_genome-1.2.3.tar.gz to build tracker '/tmp/pip-build-tracker-ikul0chq' 2024-06-25T21:56:39,745 Running setup.py (path:/tmp/pip-wheel-jkkmz7oa/checkm-genome_ecbe8cf00f5d403381714835b844dcb2/setup.py) egg_info for package checkm-genome 2024-06-25T21:56:39,746 Created temporary directory: /tmp/pip-pip-egg-info-r4yp2jvv 2024-06-25T21:56:39,746 Preparing metadata (setup.py): started 2024-06-25T21:56:39,747 Running command python setup.py egg_info 2024-06-25T21:56:41,073 running egg_info 2024-06-25T21:56:41,075 creating /tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info 2024-06-25T21:56:41,099 writing /tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/PKG-INFO 2024-06-25T21:56:41,103 writing dependency_links to /tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/dependency_links.txt 2024-06-25T21:56:41,105 writing requirements to /tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/requires.txt 2024-06-25T21:56:41,106 writing top-level names to /tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/top_level.txt 2024-06-25T21:56:41,107 writing manifest file '/tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/SOURCES.txt' 2024-06-25T21:56:41,220 reading manifest file '/tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/SOURCES.txt' 2024-06-25T21:56:41,222 reading manifest template 'MANIFEST.in' 2024-06-25T21:56:41,223 warning: no files found matching '*.txt' under directory 'docs' 2024-06-25T21:56:41,226 adding license file 'LICENSE' 2024-06-25T21:56:41,229 writing manifest file '/tmp/pip-pip-egg-info-r4yp2jvv/checkm_genome.egg-info/SOURCES.txt' 2024-06-25T21:56:41,347 Preparing metadata (setup.py): finished with status 'done' 2024-06-25T21:56:41,351 Source in /tmp/pip-wheel-jkkmz7oa/checkm-genome_ecbe8cf00f5d403381714835b844dcb2 has version 1.2.3, which satisfies requirement checkm-genome==1.2.3 from https://files.pythonhosted.org/packages/d3/f3/addf80c4c9d647c871fe4bb1659707d7b65c3e74caab1372be3f6dbf28ed/checkm_genome-1.2.3.tar.gz 2024-06-25T21:56:41,352 Removed checkm-genome==1.2.3 from https://files.pythonhosted.org/packages/d3/f3/addf80c4c9d647c871fe4bb1659707d7b65c3e74caab1372be3f6dbf28ed/checkm_genome-1.2.3.tar.gz from build tracker '/tmp/pip-build-tracker-ikul0chq' 2024-06-25T21:56:41,357 Created temporary directory: /tmp/pip-unpack-ymfilk_x 2024-06-25T21:56:41,358 Created temporary directory: /tmp/pip-unpack-3erdwedf 2024-06-25T21:56:41,367 Building wheels for collected packages: checkm-genome 2024-06-25T21:56:41,372 Created temporary directory: /tmp/pip-wheel-lft_2f4z 2024-06-25T21:56:41,372 Building wheel for checkm-genome (setup.py): started 2024-06-25T21:56:41,374 Destination directory: /tmp/pip-wheel-lft_2f4z 2024-06-25T21:56:41,374 Running command python setup.py bdist_wheel 2024-06-25T21:56:42,447 running bdist_wheel 2024-06-25T21:56:42,543 running build 2024-06-25T21:56:42,544 running build_py 2024-06-25T21:56:42,572 creating build 2024-06-25T21:56:42,572 creating build/lib 2024-06-25T21:56:42,573 creating build/lib/checkm 2024-06-25T21:56:42,574 copying checkm/profile.py -> build/lib/checkm 2024-06-25T21:56:42,577 copying checkm/prettytable.py -> build/lib/checkm 2024-06-25T21:56:42,580 copying checkm/aminoAcidIdentity.py -> build/lib/checkm 2024-06-25T21:56:42,582 copying checkm/hmmer.py -> build/lib/checkm 2024-06-25T21:56:42,584 copying checkm/hmmerAligner.py -> build/lib/checkm 2024-06-25T21:56:42,587 copying checkm/manifestManager.py -> build/lib/checkm 2024-06-25T21:56:42,589 copying checkm/binTools.py -> build/lib/checkm 2024-06-25T21:56:42,592 copying checkm/common.py -> build/lib/checkm 2024-06-25T21:56:42,594 copying checkm/markerGeneFinder.py -> build/lib/checkm 2024-06-25T21:56:42,596 copying checkm/markerSets.py -> build/lib/checkm 2024-06-25T21:56:42,598 copying checkm/__init__.py -> build/lib/checkm 2024-06-25T21:56:42,600 copying checkm/uniqueMarkers.py -> build/lib/checkm 2024-06-25T21:56:42,602 copying checkm/merger.py -> build/lib/checkm 2024-06-25T21:56:42,604 copying checkm/genomicSignatures.py -> build/lib/checkm 2024-06-25T21:56:42,606 copying checkm/treeParser.py -> build/lib/checkm 2024-06-25T21:56:42,609 copying checkm/defaultValues.py -> build/lib/checkm 2024-06-25T21:56:42,611 copying checkm/ssuFinder.py -> build/lib/checkm 2024-06-25T21:56:42,613 copying checkm/unbinned.py -> build/lib/checkm 2024-06-25T21:56:42,615 copying checkm/taxonParser.py -> build/lib/checkm 2024-06-25T21:56:42,617 copying checkm/prodigal.py -> build/lib/checkm 2024-06-25T21:56:42,619 copying checkm/coverage.py -> build/lib/checkm 2024-06-25T21:56:42,621 copying checkm/hmmerModelParser.py -> build/lib/checkm 2024-06-25T21:56:42,623 copying checkm/timeKeeper.py -> build/lib/checkm 2024-06-25T21:56:42,625 copying checkm/logger.py -> build/lib/checkm 2024-06-25T21:56:42,627 copying checkm/pplacer.py -> build/lib/checkm 2024-06-25T21:56:42,629 copying checkm/fileEntity.py -> build/lib/checkm 2024-06-25T21:56:42,631 copying checkm/coverageWindows.py -> build/lib/checkm 2024-06-25T21:56:42,633 copying checkm/checkmData.py -> build/lib/checkm 2024-06-25T21:56:42,635 copying checkm/main.py -> build/lib/checkm 2024-06-25T21:56:42,638 copying checkm/customHelpFormatter.py -> build/lib/checkm 2024-06-25T21:56:42,639 copying checkm/resultsParser.py -> build/lib/checkm 2024-06-25T21:56:42,643 copying checkm/binStatistics.py -> build/lib/checkm 2024-06-25T21:56:42,645 creating build/lib/checkm/plot 2024-06-25T21:56:42,646 copying checkm/plot/AbstractPlot.py -> build/lib/checkm/plot 2024-06-25T21:56:42,649 copying checkm/plot/nxPlot.py -> build/lib/checkm/plot 2024-06-25T21:56:42,650 copying checkm/plot/tetraDistPlots.py -> build/lib/checkm/plot 2024-06-25T21:56:42,653 copying checkm/plot/gcBiasPlots.py -> build/lib/checkm/plot 2024-06-25T21:56:42,655 copying checkm/plot/markerGenePosPlot.py -> build/lib/checkm/plot 2024-06-25T21:56:42,657 copying checkm/plot/distributionPlots.py -> build/lib/checkm/plot 2024-06-25T21:56:42,659 copying checkm/plot/gcPlots.py -> build/lib/checkm/plot 2024-06-25T21:56:42,661 copying checkm/plot/__init__.py -> build/lib/checkm/plot 2024-06-25T21:56:42,662 copying checkm/plot/codingDensityPlots.py -> build/lib/checkm/plot 2024-06-25T21:56:42,664 copying checkm/plot/lengthHistogram.py -> build/lib/checkm/plot 2024-06-25T21:56:42,666 creating build/lib/checkm/test 2024-06-25T21:56:42,667 copying checkm/test/test_binStatistics.py -> build/lib/checkm/test 2024-06-25T21:56:42,669 copying checkm/test/test_taxonomyUtils.py -> build/lib/checkm/test 2024-06-25T21:56:42,671 copying checkm/test/test_aminoAcidIdentity.py -> build/lib/checkm/test 2024-06-25T21:56:42,673 copying checkm/test/__init__.py -> build/lib/checkm/test 2024-06-25T21:56:42,674 copying checkm/test/test_seqUtils.py -> build/lib/checkm/test 2024-06-25T21:56:42,676 copying checkm/test/test_genomicSignatures.py -> build/lib/checkm/test 2024-06-25T21:56:42,678 copying checkm/test/test_ecoli.py -> build/lib/checkm/test 2024-06-25T21:56:42,680 copying checkm/test/test_markerSets.py -> build/lib/checkm/test 2024-06-25T21:56:42,682 creating build/lib/checkm/util 2024-06-25T21:56:42,683 copying checkm/util/seqUtils.py -> build/lib/checkm/util 2024-06-25T21:56:42,685 copying checkm/util/__init__.py -> build/lib/checkm/util 2024-06-25T21:56:42,687 copying checkm/util/taxonomyUtils.py -> build/lib/checkm/util 2024-06-25T21:56:42,688 copying checkm/util/pfam.py -> build/lib/checkm/util 2024-06-25T21:56:42,690 copying checkm/util/img.py -> build/lib/checkm/util 2024-06-25T21:56:42,693 running egg_info 2024-06-25T21:56:42,752 writing checkm_genome.egg-info/PKG-INFO 2024-06-25T21:56:42,755 writing dependency_links to checkm_genome.egg-info/dependency_links.txt 2024-06-25T21:56:42,757 writing requirements to checkm_genome.egg-info/requires.txt 2024-06-25T21:56:42,758 writing top-level names to checkm_genome.egg-info/top_level.txt 2024-06-25T21:56:42,789 reading manifest file 'checkm_genome.egg-info/SOURCES.txt' 2024-06-25T21:56:42,793 reading manifest template 'MANIFEST.in' 2024-06-25T21:56:42,794 warning: no files found matching '*.txt' under directory 'docs' 2024-06-25T21:56:42,796 adding license file 'LICENSE' 2024-06-25T21:56:42,800 writing manifest file 'checkm_genome.egg-info/SOURCES.txt' 2024-06-25T21:56:42,804 copying checkm/DATA_CONFIG -> build/lib/checkm 2024-06-25T21:56:42,806 copying checkm/VERSION -> build/lib/checkm 2024-06-25T21:56:42,811 running build_scripts 2024-06-25T21:56:42,811 creating build/scripts-3.11 2024-06-25T21:56:42,812 copying and adjusting bin/checkm -> build/scripts-3.11 2024-06-25T21:56:42,815 changing mode of build/scripts-3.11/checkm from 644 to 755 2024-06-25T21:56:42,840 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-06-25T21:56:42,840 !! 2024-06-25T21:56:42,841 ******************************************************************************** 2024-06-25T21:56:42,842 Please avoid running ``setup.py`` directly. 2024-06-25T21:56:42,842 Instead, use pypa/build, pypa/installer or other 2024-06-25T21:56:42,843 standards-based tools. 2024-06-25T21:56:42,844 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-06-25T21:56:42,844 ******************************************************************************** 2024-06-25T21:56:42,845 !! 2024-06-25T21:56:42,845 self.initialize_options() 2024-06-25T21:56:42,865 installing to build/bdist.linux-armv7l/wheel 2024-06-25T21:56:42,865 running install 2024-06-25T21:56:42,890 running install_lib 2024-06-25T21:56:42,915 creating build/bdist.linux-armv7l 2024-06-25T21:56:42,915 creating build/bdist.linux-armv7l/wheel 2024-06-25T21:56:42,917 creating build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,918 copying build/lib/checkm/profile.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,920 copying build/lib/checkm/prettytable.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,924 copying build/lib/checkm/aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,926 creating build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,927 copying build/lib/checkm/util/seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,930 copying build/lib/checkm/util/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,931 copying build/lib/checkm/util/taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,933 copying build/lib/checkm/util/pfam.py -> build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,935 copying build/lib/checkm/util/img.py -> build/bdist.linux-armv7l/wheel/checkm/util 2024-06-25T21:56:42,937 copying build/lib/checkm/hmmer.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,940 copying build/lib/checkm/hmmerAligner.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,942 copying build/lib/checkm/VERSION -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,944 copying build/lib/checkm/manifestManager.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,947 copying build/lib/checkm/binTools.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,949 copying build/lib/checkm/common.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,952 creating build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,953 copying build/lib/checkm/plot/AbstractPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,956 copying build/lib/checkm/plot/nxPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,958 copying build/lib/checkm/plot/tetraDistPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,960 copying build/lib/checkm/plot/gcBiasPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,962 copying build/lib/checkm/plot/markerGenePosPlot.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,964 copying build/lib/checkm/plot/distributionPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,966 copying build/lib/checkm/plot/gcPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,968 copying build/lib/checkm/plot/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,970 copying build/lib/checkm/plot/codingDensityPlots.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,972 copying build/lib/checkm/plot/lengthHistogram.py -> build/bdist.linux-armv7l/wheel/checkm/plot 2024-06-25T21:56:42,973 copying build/lib/checkm/markerGeneFinder.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,976 creating build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,977 copying build/lib/checkm/test/test_binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,978 copying build/lib/checkm/test/test_taxonomyUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,980 copying build/lib/checkm/test/test_aminoAcidIdentity.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,982 copying build/lib/checkm/test/__init__.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,984 copying build/lib/checkm/test/test_seqUtils.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,986 copying build/lib/checkm/test/test_genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,988 copying build/lib/checkm/test/test_ecoli.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,990 copying build/lib/checkm/test/test_markerSets.py -> build/bdist.linux-armv7l/wheel/checkm/test 2024-06-25T21:56:42,993 copying build/lib/checkm/markerSets.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,995 copying build/lib/checkm/__init__.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,997 copying build/lib/checkm/DATA_CONFIG -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:42,999 copying build/lib/checkm/uniqueMarkers.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,001 copying build/lib/checkm/merger.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,003 copying build/lib/checkm/genomicSignatures.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,005 copying build/lib/checkm/treeParser.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,008 copying build/lib/checkm/defaultValues.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,010 copying build/lib/checkm/ssuFinder.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,012 copying build/lib/checkm/unbinned.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,014 copying build/lib/checkm/taxonParser.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,017 copying build/lib/checkm/prodigal.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,019 copying build/lib/checkm/coverage.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,021 copying build/lib/checkm/hmmerModelParser.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,023 copying build/lib/checkm/timeKeeper.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,025 copying build/lib/checkm/logger.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,027 copying build/lib/checkm/pplacer.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,029 copying build/lib/checkm/fileEntity.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,032 copying build/lib/checkm/coverageWindows.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,035 copying build/lib/checkm/checkmData.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,037 copying build/lib/checkm/main.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,040 copying build/lib/checkm/customHelpFormatter.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,042 copying build/lib/checkm/resultsParser.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,045 copying build/lib/checkm/binStatistics.py -> build/bdist.linux-armv7l/wheel/checkm 2024-06-25T21:56:43,047 running install_egg_info 2024-06-25T21:56:43,077 Copying checkm_genome.egg-info to build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3-py3.11.egg-info 2024-06-25T21:56:43,087 running install_scripts 2024-06-25T21:56:43,088 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3.data 2024-06-25T21:56:43,089 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3.data/scripts 2024-06-25T21:56:43,090 copying build/scripts-3.11/checkm -> build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3.data/scripts 2024-06-25T21:56:43,092 changing mode of build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3.data/scripts/checkm to 755 2024-06-25T21:56:43,108 creating build/bdist.linux-armv7l/wheel/checkm_genome-1.2.3.dist-info/WHEEL 2024-06-25T21:56:43,110 creating '/tmp/pip-wheel-lft_2f4z/checkm_genome-1.2.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-25T21:56:43,112 adding 'checkm/DATA_CONFIG' 2024-06-25T21:56:43,114 adding 'checkm/VERSION' 2024-06-25T21:56:43,115 adding 'checkm/__init__.py' 2024-06-25T21:56:43,117 adding 'checkm/aminoAcidIdentity.py' 2024-06-25T21:56:43,118 adding 'checkm/binStatistics.py' 2024-06-25T21:56:43,121 adding 'checkm/binTools.py' 2024-06-25T21:56:43,122 adding 'checkm/checkmData.py' 2024-06-25T21:56:43,124 adding 'checkm/common.py' 2024-06-25T21:56:43,126 adding 'checkm/coverage.py' 2024-06-25T21:56:43,128 adding 'checkm/coverageWindows.py' 2024-06-25T21:56:43,130 adding 'checkm/customHelpFormatter.py' 2024-06-25T21:56:43,131 adding 'checkm/defaultValues.py' 2024-06-25T21:56:43,133 adding 'checkm/fileEntity.py' 2024-06-25T21:56:43,134 adding 'checkm/genomicSignatures.py' 2024-06-25T21:56:43,136 adding 'checkm/hmmer.py' 2024-06-25T21:56:43,139 adding 'checkm/hmmerAligner.py' 2024-06-25T21:56:43,140 adding 'checkm/hmmerModelParser.py' 2024-06-25T21:56:43,142 adding 'checkm/logger.py' 2024-06-25T21:56:43,145 adding 'checkm/main.py' 2024-06-25T21:56:43,148 adding 'checkm/manifestManager.py' 2024-06-25T21:56:43,150 adding 'checkm/markerGeneFinder.py' 2024-06-25T21:56:43,152 adding 'checkm/markerSets.py' 2024-06-25T21:56:43,154 adding 'checkm/merger.py' 2024-06-25T21:56:43,156 adding 'checkm/pplacer.py' 2024-06-25T21:56:43,161 adding 'checkm/prettytable.py' 2024-06-25T21:56:43,164 adding 'checkm/prodigal.py' 2024-06-25T21:56:43,165 adding 'checkm/profile.py' 2024-06-25T21:56:43,170 adding 'checkm/resultsParser.py' 2024-06-25T21:56:43,172 adding 'checkm/ssuFinder.py' 2024-06-25T21:56:43,173 adding 'checkm/taxonParser.py' 2024-06-25T21:56:43,175 adding 'checkm/timeKeeper.py' 2024-06-25T21:56:43,178 adding 'checkm/treeParser.py' 2024-06-25T21:56:43,180 adding 'checkm/unbinned.py' 2024-06-25T21:56:43,182 adding 'checkm/uniqueMarkers.py' 2024-06-25T21:56:43,184 adding 'checkm/plot/AbstractPlot.py' 2024-06-25T21:56:43,185 adding 'checkm/plot/__init__.py' 2024-06-25T21:56:43,187 adding 'checkm/plot/codingDensityPlots.py' 2024-06-25T21:56:43,188 adding 'checkm/plot/distributionPlots.py' 2024-06-25T21:56:43,190 adding 'checkm/plot/gcBiasPlots.py' 2024-06-25T21:56:43,191 adding 'checkm/plot/gcPlots.py' 2024-06-25T21:56:43,193 adding 'checkm/plot/lengthHistogram.py' 2024-06-25T21:56:43,194 adding 'checkm/plot/markerGenePosPlot.py' 2024-06-25T21:56:43,196 adding 'checkm/plot/nxPlot.py' 2024-06-25T21:56:43,197 adding 'checkm/plot/tetraDistPlots.py' 2024-06-25T21:56:43,199 adding 'checkm/test/__init__.py' 2024-06-25T21:56:43,201 adding 'checkm/test/test_aminoAcidIdentity.py' 2024-06-25T21:56:43,202 adding 'checkm/test/test_binStatistics.py' 2024-06-25T21:56:43,204 adding 'checkm/test/test_ecoli.py' 2024-06-25T21:56:43,205 adding 'checkm/test/test_genomicSignatures.py' 2024-06-25T21:56:43,207 adding 'checkm/test/test_markerSets.py' 2024-06-25T21:56:43,208 adding 'checkm/test/test_seqUtils.py' 2024-06-25T21:56:43,209 adding 'checkm/test/test_taxonomyUtils.py' 2024-06-25T21:56:43,211 adding 'checkm/util/__init__.py' 2024-06-25T21:56:43,213 adding 'checkm/util/img.py' 2024-06-25T21:56:43,215 adding 'checkm/util/pfam.py' 2024-06-25T21:56:43,217 adding 'checkm/util/seqUtils.py' 2024-06-25T21:56:43,218 adding 'checkm/util/taxonomyUtils.py' 2024-06-25T21:56:43,223 adding 'checkm_genome-1.2.3.data/scripts/checkm' 2024-06-25T21:56:43,230 adding 'checkm_genome-1.2.3.dist-info/LICENSE' 2024-06-25T21:56:43,232 adding 'checkm_genome-1.2.3.dist-info/METADATA' 2024-06-25T21:56:43,233 adding 'checkm_genome-1.2.3.dist-info/WHEEL' 2024-06-25T21:56:43,234 adding 'checkm_genome-1.2.3.dist-info/top_level.txt' 2024-06-25T21:56:43,235 adding 'checkm_genome-1.2.3.dist-info/RECORD' 2024-06-25T21:56:43,238 removing build/bdist.linux-armv7l/wheel 2024-06-25T21:56:43,376 Building wheel for checkm-genome (setup.py): finished with status 'done' 2024-06-25T21:56:43,380 Created wheel for checkm-genome: filename=checkm_genome-1.2.3-py3-none-any.whl size=163446 sha256=f7f7c7600ba04ec645654a6a0e51f73f73748323c8f18e460b5f298492cc6118 2024-06-25T21:56:43,381 Stored in directory: /tmp/pip-ephem-wheel-cache-lq70y33b/wheels/ae/a8/71/b5727da91f01aec3e08e69048eac89427c38614b866aa1ad34 2024-06-25T21:56:43,393 Successfully built checkm-genome 2024-06-25T21:56:43,402 Removed build tracker: '/tmp/pip-build-tracker-ikul0chq'