2024-06-26T20:31:50,400 Created temporary directory: /tmp/pip-build-tracker-z6aruvep 2024-06-26T20:31:50,401 Initialized build tracking at /tmp/pip-build-tracker-z6aruvep 2024-06-26T20:31:50,401 Created build tracker: /tmp/pip-build-tracker-z6aruvep 2024-06-26T20:31:50,402 Entered build tracker: /tmp/pip-build-tracker-z6aruvep 2024-06-26T20:31:50,403 Created temporary directory: /tmp/pip-wheel-0cub_p9g 2024-06-26T20:31:50,406 Created temporary directory: /tmp/pip-ephem-wheel-cache-2xx_3trx 2024-06-26T20:31:50,428 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-26T20:31:50,432 2 location(s) to search for versions of auto-qchem: 2024-06-26T20:31:50,432 * https://pypi.org/simple/auto-qchem/ 2024-06-26T20:31:50,432 * https://www.piwheels.org/simple/auto-qchem/ 2024-06-26T20:31:50,432 Fetching project page and analyzing links: https://pypi.org/simple/auto-qchem/ 2024-06-26T20:31:50,433 Getting page https://pypi.org/simple/auto-qchem/ 2024-06-26T20:31:50,435 Found index url https://pypi.org/simple/ 2024-06-26T20:31:50,649 Fetched page https://pypi.org/simple/auto-qchem/ as application/vnd.pypi.simple.v1+json 2024-06-26T20:31:50,655 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2d/b0/0cef3aca3442fcc17c899e8a583c711eea04722812355bd6a78c8508609a/auto_qchem-0.1-py3.7.egg (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,656 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/fc/1f/973e322b70b1dc076dde578db10bb9d23dc48bbc6c716b166a44ec5b91ba/auto_qchem-0.1.1-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>3.8.0) 2024-06-26T20:31:50,656 Found link https://files.pythonhosted.org/packages/0d/23/e17728ceb899946dd3bf73d08d2a24e318878450b65473da1b0e263d04db/auto-qchem-1.2.0.tar.gz (from https://pypi.org/simple/auto-qchem/), version: 1.2.0 2024-06-26T20:31:50,657 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/40/fb/218481a970603ea68c85030732a791dc825d32f62265c5b09d742d161a34/auto_qchem-1.2.0-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,658 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/9e/92/d755f0bc6d035dfd1576ae84eed471f62ca3f19722f8fc83a07e17a14fea/auto_qchem-1.2.1-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,658 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/6d/9e/e4a7efd0907a0ec773927f4ce8d77c75bd15c4abac3abce944877116670c/auto_qchem-1.2.2-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,659 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/ed/af/1aa7534006fc7ef322524ed3e5110729b322ec55c285c8670e58a55c33d9/auto_qchem-1.2.3-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,660 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/7a/e7/43ba71581bc2e2ea7822888dc8a01ffa420a4802e9ca4929fbb839774b33/auto_qchem-1.2.4-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,660 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/1c/fc/e80ba1019cd2273fc50d866359e828e92d411b0b6387da8bd9584e826a42/auto_qchem-1.2.5-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,661 Found link https://files.pythonhosted.org/packages/fe/01/32326a12dc360412c5c1b7f14e2ae2e5431cd13880cadff22df83cb09617/auto-qchem-1.2.6.tar.gz (from https://pypi.org/simple/auto-qchem/), version: 1.2.6 2024-06-26T20:31:50,662 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/f8/aa/44b1df54503fb37f212fc5a1b7c810fb064a01e22911c834de7afa8496f4/auto_qchem-1.2.6-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-06-26T20:31:50,663 Found link https://files.pythonhosted.org/packages/47/b3/de08a9717af5f58ab20d6686989ce2eb625cde8d556b46461386114f7653/auto-qchem-1.3.0.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.0 2024-06-26T20:31:50,663 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/9c/cb/e6c328ac83a738a3772d181f8aea939de1105686ad4b6b9d1a24c9182816/auto_qchem-1.3.0-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-06-26T20:31:50,665 Found link https://files.pythonhosted.org/packages/7f/82/5fc1a0e1cea86d9cff74f4b54368024220e6c4c7700c1520140ea9b3fb2d/auto-qchem-1.3.1.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.1 2024-06-26T20:31:50,665 Skipping link: No binaries permitted for auto-qchem: 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2024-06-26T20:31:50,668 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/7f/70/157eaf298eabf2dfc22713d8b7c58057fcdc2837c0fb7b6fd2c024c38aae/auto_qchem-1.3.3-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-06-26T20:31:50,669 Found link https://files.pythonhosted.org/packages/63/fc/745b07a34ffe04ab62a9105f3fe44ef3ca8a039e23dc71a15a28f6774962/auto-qchem-1.3.4.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.4 2024-06-26T20:31:50,669 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/45/30/033fb5c331bdaead1f8926a5b5782050d70335e91e2cc9fd424d3189deaf/auto_qchem-1.3.4-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-06-26T20:31:50,670 Found link https://files.pythonhosted.org/packages/db/06/e5a3965f106f9610314c92ff08127f01c023e66c8f27eb7afd179402cb57/auto-qchem-1.3.5.tar.gz (from 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link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/62/08/fb0039d9a0f24c325aefc70afa24a6a34a5bca3404e0cf59c84ccc389a6b/auto_qchem-1.3.11-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-06-26T20:31:50,678 Fetching project page and analyzing links: https://www.piwheels.org/simple/auto-qchem/ 2024-06-26T20:31:50,679 Getting page https://www.piwheels.org/simple/auto-qchem/ 2024-06-26T20:31:50,680 Found index url https://www.piwheels.org/simple/ 2024-06-26T20:31:50,841 Fetched page https://www.piwheels.org/simple/auto-qchem/ as text/html 2024-06-26T20:31:50,846 Skipping link: No binaries permitted for auto-qchem: https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.3.10-py3-none-any.whl#sha256=e02ec357292abefe4b1de78a7aa26848c68a9e930ed2d71636bd05378eaadb38 (from https://www.piwheels.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-06-26T20:31:50,846 Skipping link: No binaries permitted for auto-qchem: 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to check 1 links for project 'auto-qchem': discarding no candidates 2024-06-26T20:31:50,894 Collecting auto-qchem==1.3.11 2024-06-26T20:31:50,897 Created temporary directory: /tmp/pip-unpack-zc7sfek8 2024-06-26T20:31:51,107 Downloading auto-qchem-1.3.11.tar.gz (42 kB) 2024-06-26T20:31:51,203 Added auto-qchem==1.3.11 from https://files.pythonhosted.org/packages/8d/84/c0f05a0d173afbaf9023283ff0ab532d3e0aa1da439a9014881be5133b04/auto-qchem-1.3.11.tar.gz to build tracker '/tmp/pip-build-tracker-z6aruvep' 2024-06-26T20:31:51,204 Running setup.py (path:/tmp/pip-wheel-0cub_p9g/auto-qchem_b89b46debb2e41488cf1dfaf9dc0724f/setup.py) egg_info for package auto-qchem 2024-06-26T20:31:51,205 Created temporary directory: /tmp/pip-pip-egg-info-q01wfhqr 2024-06-26T20:31:51,206 Preparing metadata (setup.py): started 2024-06-26T20:31:51,207 Running command python setup.py egg_info 2024-06-26T20:31:52,352 running egg_info 2024-06-26T20:31:52,353 creating /tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info 2024-06-26T20:31:52,379 writing /tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/PKG-INFO 2024-06-26T20:31:52,383 writing dependency_links to /tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/dependency_links.txt 2024-06-26T20:31:52,385 writing requirements to /tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/requires.txt 2024-06-26T20:31:52,386 writing top-level names to /tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/top_level.txt 2024-06-26T20:31:52,388 writing manifest file '/tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/SOURCES.txt' 2024-06-26T20:31:52,472 reading manifest file '/tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/SOURCES.txt' 2024-06-26T20:31:52,474 adding license file 'LICENSE.md' 2024-06-26T20:31:52,476 writing manifest file '/tmp/pip-pip-egg-info-q01wfhqr/auto_qchem.egg-info/SOURCES.txt' 2024-06-26T20:31:52,594 Preparing metadata (setup.py): finished with status 'done' 2024-06-26T20:31:52,598 Source in /tmp/pip-wheel-0cub_p9g/auto-qchem_b89b46debb2e41488cf1dfaf9dc0724f has version 1.3.11, which satisfies requirement auto-qchem==1.3.11 from https://files.pythonhosted.org/packages/8d/84/c0f05a0d173afbaf9023283ff0ab532d3e0aa1da439a9014881be5133b04/auto-qchem-1.3.11.tar.gz 2024-06-26T20:31:52,599 Removed auto-qchem==1.3.11 from https://files.pythonhosted.org/packages/8d/84/c0f05a0d173afbaf9023283ff0ab532d3e0aa1da439a9014881be5133b04/auto-qchem-1.3.11.tar.gz from build tracker '/tmp/pip-build-tracker-z6aruvep' 2024-06-26T20:31:52,605 Created temporary directory: /tmp/pip-unpack-pjopwe2p 2024-06-26T20:31:52,606 Created temporary directory: /tmp/pip-unpack-t6d7sa4l 2024-06-26T20:31:52,627 Building wheels for collected packages: auto-qchem 2024-06-26T20:31:52,631 Created temporary directory: /tmp/pip-wheel-s7f_qyej 2024-06-26T20:31:52,632 Building wheel for auto-qchem (setup.py): started 2024-06-26T20:31:52,633 Destination directory: /tmp/pip-wheel-s7f_qyej 2024-06-26T20:31:52,634 Running command python setup.py bdist_wheel 2024-06-26T20:31:53,747 running bdist_wheel 2024-06-26T20:31:53,847 running build 2024-06-26T20:31:53,847 running build_py 2024-06-26T20:31:53,876 creating build 2024-06-26T20:31:53,876 creating build/lib 2024-06-26T20:31:53,877 creating build/lib/autoqchem 2024-06-26T20:31:53,878 copying autoqchem/helper_classes.py -> build/lib/autoqchem 2024-06-26T20:31:53,880 copying autoqchem/rdkit_utils.py -> build/lib/autoqchem 2024-06-26T20:31:53,883 copying autoqchem/helper_functions.py -> build/lib/autoqchem 2024-06-26T20:31:53,885 copying autoqchem/test.py -> build/lib/autoqchem 2024-06-26T20:31:53,887 copying autoqchem/draw_utils.py -> build/lib/autoqchem 2024-06-26T20:31:53,888 copying autoqchem/molecule.py -> build/lib/autoqchem 2024-06-26T20:31:53,890 copying autoqchem/gaussian_log_extractor.py -> build/lib/autoqchem 2024-06-26T20:31:53,893 copying autoqchem/__init__.py -> build/lib/autoqchem 2024-06-26T20:31:53,894 copying autoqchem/sge_manager.py -> build/lib/autoqchem 2024-06-26T20:31:53,897 copying autoqchem/slurm_manager.py -> build/lib/autoqchem 2024-06-26T20:31:53,900 copying autoqchem/db_functions.py -> build/lib/autoqchem 2024-06-26T20:31:53,902 copying autoqchem/gaussian_input_generator.py -> build/lib/autoqchem 2024-06-26T20:31:53,904 copying autoqchem/openbabel_utils.py -> build/lib/autoqchem 2024-06-26T20:31:53,906 copying autoqchem/descriptor_functions.py -> build/lib/autoqchem 2024-06-26T20:31:53,935 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-06-26T20:31:53,935 !! 2024-06-26T20:31:53,936 ******************************************************************************** 2024-06-26T20:31:53,937 Please avoid running ``setup.py`` directly. 2024-06-26T20:31:53,937 Instead, use pypa/build, pypa/installer or other 2024-06-26T20:31:53,938 standards-based tools. 2024-06-26T20:31:53,939 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-06-26T20:31:53,939 ******************************************************************************** 2024-06-26T20:31:53,940 !! 2024-06-26T20:31:53,941 self.initialize_options() 2024-06-26T20:31:53,961 installing to build/bdist.linux-armv7l/wheel 2024-06-26T20:31:53,961 running install 2024-06-26T20:31:53,986 running install_lib 2024-06-26T20:31:54,012 creating build/bdist.linux-armv7l 2024-06-26T20:31:54,013 creating build/bdist.linux-armv7l/wheel 2024-06-26T20:31:54,015 creating build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,016 copying build/lib/autoqchem/helper_classes.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,019 copying build/lib/autoqchem/rdkit_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,021 copying build/lib/autoqchem/helper_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,023 copying build/lib/autoqchem/test.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,025 copying build/lib/autoqchem/draw_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,027 copying build/lib/autoqchem/molecule.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,029 copying build/lib/autoqchem/gaussian_log_extractor.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,032 copying build/lib/autoqchem/__init__.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,033 copying build/lib/autoqchem/sge_manager.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,036 copying build/lib/autoqchem/slurm_manager.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,039 copying build/lib/autoqchem/db_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,041 copying build/lib/autoqchem/gaussian_input_generator.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,044 copying build/lib/autoqchem/openbabel_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,046 copying build/lib/autoqchem/descriptor_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-06-26T20:31:54,047 running install_data 2024-06-26T20:31:54,074 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11.data 2024-06-26T20:31:54,074 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11.data/data 2024-06-26T20:31:54,075 warning: install_data: setup script did not provide a directory for 'config.yml' -- installing right in 'build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11.data/data' 2024-06-26T20:31:54,076 copying config.yml -> build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11.data/data 2024-06-26T20:31:54,078 running install_egg_info 2024-06-26T20:31:54,144 running egg_info 2024-06-26T20:31:54,169 writing auto_qchem.egg-info/PKG-INFO 2024-06-26T20:31:54,172 writing dependency_links to auto_qchem.egg-info/dependency_links.txt 2024-06-26T20:31:54,174 writing requirements to auto_qchem.egg-info/requires.txt 2024-06-26T20:31:54,175 writing top-level names to auto_qchem.egg-info/top_level.txt 2024-06-26T20:31:54,203 reading manifest file 'auto_qchem.egg-info/SOURCES.txt' 2024-06-26T20:31:54,205 adding license file 'LICENSE.md' 2024-06-26T20:31:54,208 writing manifest file 'auto_qchem.egg-info/SOURCES.txt' 2024-06-26T20:31:54,209 Copying auto_qchem.egg-info to build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11-py3.11.egg-info 2024-06-26T20:31:54,219 running install_scripts 2024-06-26T20:31:54,238 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.11.dist-info/WHEEL 2024-06-26T20:31:54,241 creating '/tmp/pip-wheel-s7f_qyej/auto_qchem-1.3.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-26T20:31:54,243 adding 'auto_qchem-1.3.11.data/data/config.yml' 2024-06-26T20:31:54,246 adding 'autoqchem/__init__.py' 2024-06-26T20:31:54,249 adding 'autoqchem/db_functions.py' 2024-06-26T20:31:54,251 adding 'autoqchem/descriptor_functions.py' 2024-06-26T20:31:54,252 adding 'autoqchem/draw_utils.py' 2024-06-26T20:31:54,254 adding 'autoqchem/gaussian_input_generator.py' 2024-06-26T20:31:54,256 adding 'autoqchem/gaussian_log_extractor.py' 2024-06-26T20:31:54,258 adding 'autoqchem/helper_classes.py' 2024-06-26T20:31:54,259 adding 'autoqchem/helper_functions.py' 2024-06-26T20:31:54,260 adding 'autoqchem/molecule.py' 2024-06-26T20:31:54,262 adding 'autoqchem/openbabel_utils.py' 2024-06-26T20:31:54,264 adding 'autoqchem/rdkit_utils.py' 2024-06-26T20:31:54,267 adding 'autoqchem/sge_manager.py' 2024-06-26T20:31:54,270 adding 'autoqchem/slurm_manager.py' 2024-06-26T20:31:54,272 adding 'autoqchem/test.py' 2024-06-26T20:31:54,277 adding 'auto_qchem-1.3.11.dist-info/LICENSE.md' 2024-06-26T20:31:54,279 adding 'auto_qchem-1.3.11.dist-info/METADATA' 2024-06-26T20:31:54,280 adding 'auto_qchem-1.3.11.dist-info/WHEEL' 2024-06-26T20:31:54,281 adding 'auto_qchem-1.3.11.dist-info/top_level.txt' 2024-06-26T20:31:54,282 adding 'auto_qchem-1.3.11.dist-info/RECORD' 2024-06-26T20:31:54,283 removing build/bdist.linux-armv7l/wheel 2024-06-26T20:31:54,411 Building wheel for auto-qchem (setup.py): finished with status 'done' 2024-06-26T20:31:54,415 Created wheel for auto-qchem: filename=auto_qchem-1.3.11-py3-none-any.whl size=53551 sha256=61ce2f8ea049190a69b7541e224ed8ae2caec991dafc539417d5261ecb6124b7 2024-06-26T20:31:54,416 Stored in directory: /tmp/pip-ephem-wheel-cache-2xx_3trx/wheels/ed/9a/9d/40953c388b9e6ab41068d9bedeee1b1dc4d2cc1f121d1de1ea 2024-06-26T20:31:54,427 Successfully built auto-qchem 2024-06-26T20:31:54,432 Removed build tracker: '/tmp/pip-build-tracker-z6aruvep'