2024-06-27T14:48:37,377 Created temporary directory: /tmp/pip-build-tracker-pm3v6ixh 2024-06-27T14:48:37,378 Initialized build tracking at /tmp/pip-build-tracker-pm3v6ixh 2024-06-27T14:48:37,379 Created build tracker: /tmp/pip-build-tracker-pm3v6ixh 2024-06-27T14:48:37,379 Entered build tracker: /tmp/pip-build-tracker-pm3v6ixh 2024-06-27T14:48:37,380 Created temporary directory: /tmp/pip-wheel-ui8ksscj 2024-06-27T14:48:37,383 Created temporary directory: /tmp/pip-ephem-wheel-cache-h19s6tsg 2024-06-27T14:48:37,407 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-27T14:48:37,410 2 location(s) to search for versions of macrel: 2024-06-27T14:48:37,410 * https://pypi.org/simple/macrel/ 2024-06-27T14:48:37,410 * https://www.piwheels.org/simple/macrel/ 2024-06-27T14:48:37,411 Fetching project page and analyzing links: https://pypi.org/simple/macrel/ 2024-06-27T14:48:37,411 Getting page https://pypi.org/simple/macrel/ 2024-06-27T14:48:37,413 Found index url https://pypi.org/simple/ 2024-06-27T14:48:37,632 Fetched page https://pypi.org/simple/macrel/ as application/vnd.pypi.simple.v1+json 2024-06-27T14:48:37,635 Found link https://files.pythonhosted.org/packages/f1/f8/6b78e3f3c63fef49c5c3e4c0d2f2304e7ad7ceef11aa92888a96a9a9d9f7/macrel-0.4.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.4.0 2024-06-27T14:48:37,636 Found link https://files.pythonhosted.org/packages/73/8a/7e35ed92e3930c06fcf84c4237a58035ce40825e9a007befb973a3363818/macrel-0.6.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.0 2024-06-27T14:48:37,636 Found link https://files.pythonhosted.org/packages/1f/e6/84c10c618a31649b316ebf66d061284dfad74a2e6f5490f6b4b73eecc116/macrel-0.6.1.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.1 2024-06-27T14:48:37,637 Found link https://files.pythonhosted.org/packages/47/87/37920928f4052b8bd2fe92f4d584c4543a9cd844c36408f865b6d67f96d1/macrel-1.1.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.1.0 2024-06-27T14:48:37,638 Found link https://files.pythonhosted.org/packages/dd/40/319ac423a1c8c22fcd9512d8d8726c037edf50b0e5859e04e1ae66b145d6/macrel-1.2.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.2.0 2024-06-27T14:48:37,638 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/42/a7/d72533a839ef768152648c6cff1ad02cb8e0aa2baa682875543822838f34/macrel-1.3.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2024-06-27T14:48:37,639 Found link https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.3.0 2024-06-27T14:48:37,640 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/04/7f/deccb15d02e5f64221dece01ddcb857dce94c55d21c3dd473a752f8c1c48/macrel-1.4.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2024-06-27T14:48:37,641 Found link https://files.pythonhosted.org/packages/68/12/a03aea619552da8ed087eebd78ccd80bd25039a78c04a9ebc37f87a18f3a/macrel-1.4.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.4.0 2024-06-27T14:48:37,641 Fetching project page and analyzing links: https://www.piwheels.org/simple/macrel/ 2024-06-27T14:48:37,642 Getting page https://www.piwheels.org/simple/macrel/ 2024-06-27T14:48:37,643 Found index url https://www.piwheels.org/simple/ 2024-06-27T14:48:37,801 Fetched page https://www.piwheels.org/simple/macrel/ as text/html 2024-06-27T14:48:37,803 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.3.0-py3-none-any.whl#sha256=3da259eb438294850c2ff458e238de2149e4cd5afb84c93820237b440c6b42d1 (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,804 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.2.0-py3-none-any.whl#sha256=48576d924f0180b1aee773e684176977dbcb27b61842fd1b008eb078ae300c6e (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,805 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.1.0-py3-none-any.whl#sha256=5c1275c71873a16760d47f10592fead14821308943c6e2581e2f57f3431a9cf8 (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,805 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.1-py3-none-any.whl#sha256=def298757487ee73cfb70f4d411ad41e4e1ecbe5abecb1b5fca9019cc04440fe (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,806 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.0-py3-none-any.whl#sha256=7ece8510e875f47b331d420a802d239846a2f7703367e550fa0294ddab6fabb8 (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,807 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.4.0-py3-none-any.whl#sha256=3dcc85ce084d596da3b8264c7c44330a4e11a51dc763cbd0c6b9362dcde9f1b6 (from https://www.piwheels.org/simple/macrel/) 2024-06-27T14:48:37,807 Skipping link: not a file: https://www.piwheels.org/simple/macrel/ 2024-06-27T14:48:37,808 Skipping link: not a file: https://pypi.org/simple/macrel/ 2024-06-27T14:48:37,828 Given no hashes to check 1 links for project 'macrel': discarding no candidates 2024-06-27T14:48:37,848 Collecting macrel==1.4.0 2024-06-27T14:48:37,850 Created temporary directory: /tmp/pip-unpack-wz2tzriq 2024-06-27T14:48:38,061 Downloading macrel-1.4.0.tar.gz (4.7 MB) 2024-06-27T14:48:39,208 Added macrel==1.4.0 from https://files.pythonhosted.org/packages/68/12/a03aea619552da8ed087eebd78ccd80bd25039a78c04a9ebc37f87a18f3a/macrel-1.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-pm3v6ixh' 2024-06-27T14:48:39,210 Running setup.py (path:/tmp/pip-wheel-ui8ksscj/macrel_d4d06598f33743a6a23f707af46fa6de/setup.py) egg_info for package macrel 2024-06-27T14:48:39,211 Created temporary directory: /tmp/pip-pip-egg-info-pzxatlou 2024-06-27T14:48:39,211 Preparing metadata (setup.py): started 2024-06-27T14:48:39,213 Running command python setup.py egg_info 2024-06-27T14:48:40,285 running egg_info 2024-06-27T14:48:40,286 creating /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info 2024-06-27T14:48:40,312 writing /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/PKG-INFO 2024-06-27T14:48:40,316 writing dependency_links to /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/dependency_links.txt 2024-06-27T14:48:40,317 writing entry points to /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/entry_points.txt 2024-06-27T14:48:40,318 writing requirements to /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/requires.txt 2024-06-27T14:48:40,319 writing top-level names to /tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/top_level.txt 2024-06-27T14:48:40,321 writing manifest file '/tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/SOURCES.txt' 2024-06-27T14:48:40,407 reading manifest file '/tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/SOURCES.txt' 2024-06-27T14:48:40,408 reading manifest template 'MANIFEST.in' 2024-06-27T14:48:40,409 warning: no files found matching 'macrel/data/*' 2024-06-27T14:48:40,410 adding license file 'LICENSE' 2024-06-27T14:48:40,412 writing manifest file '/tmp/pip-pip-egg-info-pzxatlou/macrel.egg-info/SOURCES.txt' 2024-06-27T14:48:40,532 Preparing metadata (setup.py): finished with status 'done' 2024-06-27T14:48:40,537 Source in /tmp/pip-wheel-ui8ksscj/macrel_d4d06598f33743a6a23f707af46fa6de has version 1.4.0, which satisfies requirement macrel==1.4.0 from https://files.pythonhosted.org/packages/68/12/a03aea619552da8ed087eebd78ccd80bd25039a78c04a9ebc37f87a18f3a/macrel-1.4.0.tar.gz 2024-06-27T14:48:40,538 Removed macrel==1.4.0 from https://files.pythonhosted.org/packages/68/12/a03aea619552da8ed087eebd78ccd80bd25039a78c04a9ebc37f87a18f3a/macrel-1.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-pm3v6ixh' 2024-06-27T14:48:40,543 Created temporary directory: /tmp/pip-unpack-swoxmmma 2024-06-27T14:48:40,544 Created temporary directory: /tmp/pip-unpack-_acj11z9 2024-06-27T14:48:40,551 Building wheels for collected packages: macrel 2024-06-27T14:48:40,555 Created temporary directory: /tmp/pip-wheel-62xg082a 2024-06-27T14:48:40,556 Building wheel for macrel (setup.py): started 2024-06-27T14:48:40,557 Destination directory: /tmp/pip-wheel-62xg082a 2024-06-27T14:48:40,557 Running command python setup.py bdist_wheel 2024-06-27T14:48:41,636 running bdist_wheel 2024-06-27T14:48:41,735 running build 2024-06-27T14:48:41,736 running build_py 2024-06-27T14:48:41,764 creating build 2024-06-27T14:48:41,764 creating build/lib 2024-06-27T14:48:41,765 creating build/lib/macrel 2024-06-27T14:48:41,766 copying macrel/database.py -> build/lib/macrel 2024-06-27T14:48:41,768 copying macrel/AMP_predict.py -> build/lib/macrel 2024-06-27T14:48:41,770 copying macrel/output.py -> build/lib/macrel 2024-06-27T14:48:41,772 copying macrel/utils.py -> build/lib/macrel 2024-06-27T14:48:41,774 copying macrel/filter_smorfs.py -> build/lib/macrel 2024-06-27T14:48:41,776 copying macrel/main.py -> build/lib/macrel 2024-06-27T14:48:41,778 copying macrel/macrel_features.py -> build/lib/macrel 2024-06-27T14:48:41,780 copying macrel/ORFs_prediction.py -> build/lib/macrel 2024-06-27T14:48:41,782 copying macrel/__init__.py -> build/lib/macrel 2024-06-27T14:48:41,783 copying macrel/ampsphere.py -> build/lib/macrel 2024-06-27T14:48:41,784 copying macrel/fasta.py -> build/lib/macrel 2024-06-27T14:48:41,786 copying macrel/macrel_version.py -> build/lib/macrel 2024-06-27T14:48:41,787 copying macrel/AMP_features.py -> build/lib/macrel 2024-06-27T14:48:41,790 creating build/lib/macrel/tests 2024-06-27T14:48:41,790 copying macrel/tests/test_ampsphere.py -> build/lib/macrel/tests 2024-06-27T14:48:41,792 copying macrel/tests/test_features.py -> build/lib/macrel/tests 2024-06-27T14:48:41,794 copying macrel/tests/__init__.py -> build/lib/macrel/tests 2024-06-27T14:48:41,795 copying macrel/tests/test_predict.py -> build/lib/macrel/tests 2024-06-27T14:48:41,800 creating build/lib/macrel/data 2024-06-27T14:48:41,800 creating build/lib/macrel/data/scripts 2024-06-27T14:48:41,802 copying macrel/data/scripts/trim.pe.ngl -> build/lib/macrel/data/scripts 2024-06-27T14:48:41,804 copying macrel/data/scripts/count.ngl -> build/lib/macrel/data/scripts 2024-06-27T14:48:41,806 copying macrel/data/scripts/trim.se.ngl -> build/lib/macrel/data/scripts 2024-06-27T14:48:41,807 creating build/lib/macrel/data/models 2024-06-27T14:48:41,808 copying macrel/data/models/AMP.pkl.gz -> build/lib/macrel/data/models 2024-06-27T14:48:41,875 copying macrel/data/models/Hemo.pkl.gz -> build/lib/macrel/data/models 2024-06-27T14:48:41,907 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-06-27T14:48:41,908 !! 2024-06-27T14:48:41,909 ******************************************************************************** 2024-06-27T14:48:41,910 Please avoid running ``setup.py`` directly. 2024-06-27T14:48:41,910 Instead, use pypa/build, pypa/installer or other 2024-06-27T14:48:41,911 standards-based tools. 2024-06-27T14:48:41,912 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-06-27T14:48:41,912 ******************************************************************************** 2024-06-27T14:48:41,914 !! 2024-06-27T14:48:41,914 self.initialize_options() 2024-06-27T14:48:41,933 installing to build/bdist.linux-armv7l/wheel 2024-06-27T14:48:41,934 running install 2024-06-27T14:48:41,959 running install_lib 2024-06-27T14:48:41,984 creating build/bdist.linux-armv7l 2024-06-27T14:48:41,985 creating build/bdist.linux-armv7l/wheel 2024-06-27T14:48:41,986 creating build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:41,987 copying build/lib/macrel/database.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:41,989 copying build/lib/macrel/AMP_predict.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:41,991 copying build/lib/macrel/output.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:41,993 copying build/lib/macrel/utils.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:41,995 creating build/bdist.linux-armv7l/wheel/macrel/data 2024-06-27T14:48:41,997 creating build/bdist.linux-armv7l/wheel/macrel/data/scripts 2024-06-27T14:48:41,998 copying build/lib/macrel/data/scripts/trim.pe.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2024-06-27T14:48:41,999 copying build/lib/macrel/data/scripts/count.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2024-06-27T14:48:42,001 copying build/lib/macrel/data/scripts/trim.se.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2024-06-27T14:48:42,003 creating build/bdist.linux-armv7l/wheel/macrel/data/models 2024-06-27T14:48:42,004 copying build/lib/macrel/data/models/AMP.pkl.gz -> build/bdist.linux-armv7l/wheel/macrel/data/models 2024-06-27T14:48:42,074 copying build/lib/macrel/data/models/Hemo.pkl.gz -> build/bdist.linux-armv7l/wheel/macrel/data/models 2024-06-27T14:48:42,078 copying build/lib/macrel/filter_smorfs.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,080 copying build/lib/macrel/main.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,082 copying build/lib/macrel/macrel_features.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,084 copying build/lib/macrel/ORFs_prediction.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,086 copying build/lib/macrel/__init__.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,087 creating build/bdist.linux-armv7l/wheel/macrel/tests 2024-06-27T14:48:42,088 copying build/lib/macrel/tests/test_ampsphere.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2024-06-27T14:48:42,090 copying build/lib/macrel/tests/test_features.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2024-06-27T14:48:42,092 copying build/lib/macrel/tests/__init__.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2024-06-27T14:48:42,093 copying build/lib/macrel/tests/test_predict.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2024-06-27T14:48:42,095 copying build/lib/macrel/ampsphere.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,097 copying build/lib/macrel/fasta.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,098 copying build/lib/macrel/macrel_version.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,100 copying build/lib/macrel/AMP_features.py -> build/bdist.linux-armv7l/wheel/macrel 2024-06-27T14:48:42,101 running install_egg_info 2024-06-27T14:48:42,166 running egg_info 2024-06-27T14:48:42,190 writing macrel.egg-info/PKG-INFO 2024-06-27T14:48:42,194 writing dependency_links to macrel.egg-info/dependency_links.txt 2024-06-27T14:48:42,195 writing entry points to macrel.egg-info/entry_points.txt 2024-06-27T14:48:42,196 writing requirements to macrel.egg-info/requires.txt 2024-06-27T14:48:42,198 writing top-level names to macrel.egg-info/top_level.txt 2024-06-27T14:48:42,228 reading manifest file 'macrel.egg-info/SOURCES.txt' 2024-06-27T14:48:42,230 reading manifest template 'MANIFEST.in' 2024-06-27T14:48:42,232 warning: no files found matching 'macrel/data/*' 2024-06-27T14:48:42,232 adding license file 'LICENSE' 2024-06-27T14:48:42,235 writing manifest file 'macrel.egg-info/SOURCES.txt' 2024-06-27T14:48:42,237 Copying macrel.egg-info to build/bdist.linux-armv7l/wheel/macrel-1.4.0-py3.11.egg-info 2024-06-27T14:48:42,250 running install_scripts 2024-06-27T14:48:42,266 creating build/bdist.linux-armv7l/wheel/macrel-1.4.0.dist-info/WHEEL 2024-06-27T14:48:42,268 creating '/tmp/pip-wheel-62xg082a/macrel-1.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-27T14:48:42,271 adding 'macrel/AMP_features.py' 2024-06-27T14:48:42,272 adding 'macrel/AMP_predict.py' 2024-06-27T14:48:42,274 adding 'macrel/ORFs_prediction.py' 2024-06-27T14:48:42,275 adding 'macrel/__init__.py' 2024-06-27T14:48:42,276 adding 'macrel/ampsphere.py' 2024-06-27T14:48:42,278 adding 'macrel/database.py' 2024-06-27T14:48:42,280 adding 'macrel/fasta.py' 2024-06-27T14:48:42,281 adding 'macrel/filter_smorfs.py' 2024-06-27T14:48:42,283 adding 'macrel/macrel_features.py' 2024-06-27T14:48:42,284 adding 'macrel/macrel_version.py' 2024-06-27T14:48:42,286 adding 'macrel/main.py' 2024-06-27T14:48:42,288 adding 'macrel/output.py' 2024-06-27T14:48:42,289 adding 'macrel/utils.py' 2024-06-27T14:48:42,845 adding 'macrel/data/models/AMP.pkl.gz' 2024-06-27T14:48:42,892 adding 'macrel/data/models/Hemo.pkl.gz' 2024-06-27T14:48:42,895 adding 'macrel/data/scripts/count.ngl' 2024-06-27T14:48:42,896 adding 'macrel/data/scripts/trim.pe.ngl' 2024-06-27T14:48:42,897 adding 'macrel/data/scripts/trim.se.ngl' 2024-06-27T14:48:42,898 adding 'macrel/tests/__init__.py' 2024-06-27T14:48:42,899 adding 'macrel/tests/test_ampsphere.py' 2024-06-27T14:48:42,901 adding 'macrel/tests/test_features.py' 2024-06-27T14:48:42,902 adding 'macrel/tests/test_predict.py' 2024-06-27T14:48:42,904 adding 'macrel-1.4.0.dist-info/LICENSE' 2024-06-27T14:48:42,905 adding 'macrel-1.4.0.dist-info/METADATA' 2024-06-27T14:48:42,906 adding 'macrel-1.4.0.dist-info/WHEEL' 2024-06-27T14:48:42,907 adding 'macrel-1.4.0.dist-info/entry_points.txt' 2024-06-27T14:48:42,908 adding 'macrel-1.4.0.dist-info/top_level.txt' 2024-06-27T14:48:42,909 adding 'macrel-1.4.0.dist-info/RECORD' 2024-06-27T14:48:42,966 removing build/bdist.linux-armv7l/wheel 2024-06-27T14:48:43,099 Building wheel for macrel (setup.py): finished with status 'done' 2024-06-27T14:48:43,148 Created wheel for macrel: filename=macrel-1.4.0-py3-none-any.whl size=4672286 sha256=2f1342ee07fdbadd57ed2dd272da8509fe388447628dbbcc4654345f5f6c8547 2024-06-27T14:48:43,149 Stored in directory: /tmp/pip-ephem-wheel-cache-h19s6tsg/wheels/bc/f2/e8/808a5aa716460aa43637e1eb2a63ab561ac5fb377b929bb57e 2024-06-27T14:48:43,162 Successfully built macrel 2024-06-27T14:48:43,267 Removed build tracker: '/tmp/pip-build-tracker-pm3v6ixh'