2024-06-28T09:12:05,246 Created temporary directory: /tmp/pip-build-tracker-_r3xc0ql 2024-06-28T09:12:05,247 Initialized build tracking at /tmp/pip-build-tracker-_r3xc0ql 2024-06-28T09:12:05,248 Created build tracker: /tmp/pip-build-tracker-_r3xc0ql 2024-06-28T09:12:05,248 Entered build tracker: /tmp/pip-build-tracker-_r3xc0ql 2024-06-28T09:12:05,249 Created temporary directory: /tmp/pip-wheel-hai4vuce 2024-06-28T09:12:05,252 Created temporary directory: /tmp/pip-ephem-wheel-cache-4vpxkel0 2024-06-28T09:12:05,275 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-28T09:12:05,279 2 location(s) to search for versions of orange3-singlecell: 2024-06-28T09:12:05,279 * https://pypi.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,279 * https://www.piwheels.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,280 Fetching project page and analyzing links: https://pypi.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,280 Getting page https://pypi.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,282 Found index url https://pypi.org/simple/ 2024-06-28T09:12:05,494 Fetched page https://pypi.org/simple/orange3-singlecell/ as application/vnd.pypi.simple.v1+json 2024-06-28T09:12:05,499 Found link https://files.pythonhosted.org/packages/5b/95/54260cf07df572e565ee6acea472bebfbed0da57913b996797ad285ea4b1/Orange3-SingleCell-0.8.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.8.1 2024-06-28T09:12:05,500 Found link https://files.pythonhosted.org/packages/4c/48/0039869278cce8c99a42617108f3cecd0dee986b8db555a8a4993372a7db/Orange3-SingleCell-0.8.2.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.8.2 2024-06-28T09:12:05,501 Found link https://files.pythonhosted.org/packages/2b/8c/605f592e766cd135eecd5b228a5c16e54efdbf47e9bff0d9ebc84db14474/Orange3-SingleCell-0.9.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.0 2024-06-28T09:12:05,501 Found link https://files.pythonhosted.org/packages/67/2b/412646f09d09f037cfef782531ab48d7f4e527f6d66e13c81ea897723364/Orange3-SingleCell-0.9.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.1 2024-06-28T09:12:05,502 Found link https://files.pythonhosted.org/packages/4d/1e/c218913869d1cfb037dee0a98dea81608f12075728daf8bbd7d260628af7/Orange3-SingleCell-0.9.5.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.5 2024-06-28T09:12:05,503 Found link https://files.pythonhosted.org/packages/7d/39/ed0faf7e4aab314bb2f1106447afc8c085ac109bba75b1ba99c074037622/Orange3-SingleCell-1.0.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 1.0.0 2024-06-28T09:12:05,504 Found link https://files.pythonhosted.org/packages/38/54/6704ce255be73bddbe97f027a5f796ac1ddc38b9847e87cf7a6d8ccbf847/Orange3-SingleCell-1.1.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 1.1.0 2024-06-28T09:12:05,505 Found link https://files.pythonhosted.org/packages/dc/f2/34625edfeeec8ed2c0144693b0b42c7e7b50168bd869e61931eb18648379/Orange3-SingleCell-1.2.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.2.0 2024-06-28T09:12:05,506 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/c9/63/f8a52b0426e95cfc34a312d5f8a902f75aeb45bb8aa4c5f0303af1ab25de/Orange3_SingleCell-1.2.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,507 Found link https://files.pythonhosted.org/packages/63/2c/b7fdb135fac07456a3d16e84d977faf6b8a10e5535eae2b72076e69e13cf/Orange3-SingleCell-1.3.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.3.0 2024-06-28T09:12:05,507 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/1f/18/7f0dca3edcb871e3df638818baca2dd57ee6001c56bd6c73f697074afba3/Orange3_SingleCell-1.3.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,508 Found link https://files.pythonhosted.org/packages/6c/e2/a435e6c9f0c0e45a1b0bc8869a1c9df005656e41e29324e4e8518dbf65bf/Orange3-SingleCell-1.4.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.4.0 2024-06-28T09:12:05,509 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/b1/62/03222dac7c4272031c896f217e74e12c99e65b3333f578f4677501c014ec/Orange3_SingleCell-1.4.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,510 Found link https://files.pythonhosted.org/packages/83/b0/f6d9903bc780be4950342b5b132ae1a62ff1d3ec137ff3d8724cbfb4c9d8/Orange3-SingleCell-1.5.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.5.0 2024-06-28T09:12:05,511 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/d6/6c/18b1edb84a6765f44c3f50510959ca3638e215dced4597c1a856ea51df38/Orange3_SingleCell-1.5.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,512 Found link https://files.pythonhosted.org/packages/c1/dd/c7e76c4a3cf5d08aa5ffb5c10472a6a0e6aa3900c2287b9400413a2eaf41/Orange3-SingleCell-1.6.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.6.0 2024-06-28T09:12:05,512 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/e8/5b/dac38da3d108dbbbf87b4567b331bf444b47d71ef41978ec4f358bfebf5c/Orange3_SingleCell-1.6.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,513 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/88/d9/7f579472fcecb3f540f6ec0c4e0f7809727948f8e7ecb85705f154928d61/Orange3_SingleCell-1.7.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,513 Found link https://files.pythonhosted.org/packages/d5/87/1b1a469eb89935f0b8df90b610d2b31b7c52749e0c20378cde95b5e20774/orange3_singlecell-1.7.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.0 2024-06-28T09:12:05,514 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/c4/73/eb9681758ee2937d3f153179f862d995b576197f4c807e3cc79b9e90b218/Orange3_SingleCell-1.7.1-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,515 Found link https://files.pythonhosted.org/packages/f2/1f/43c56efa73dfd1e9c18ed46ef03ff24f00a1872a86d1d5cd8e9d9e009d7d/orange3_singlecell-1.7.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.1 2024-06-28T09:12:05,516 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/13/03/b0ca0be1c9a5405de2546f3b85ee04ade001005d035a04711ff5f2d04760/Orange3_SingleCell-1.7.2-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,517 Found link https://files.pythonhosted.org/packages/72/85/0f6f5b459853b3755f25c82b519f313235de010730c1550abd40e5d585cc/orange3_singlecell-1.7.2.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.2 2024-06-28T09:12:05,518 Fetching project page and analyzing links: https://www.piwheels.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,518 Getting page https://www.piwheels.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,520 Found index url https://www.piwheels.org/simple/ 2024-06-28T09:12:05,671 Fetched page https://www.piwheels.org/simple/orange3-singlecell/ as text/html 2024-06-28T09:12:05,676 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.7.1-py3-none-any.whl#sha256=8da2ba6adb3e7e5598b545fb214f2ac0047cd44aaa6bbdacab2c6cf792ab0521 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,677 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.7.0-py3-none-any.whl#sha256=50f0a0c53df40f2317a673a2dccf590ac849182eaf1c27fc11cd22011cc48eae (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,678 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.6.0-py3-none-any.whl#sha256=ffdee9a23abbf2afa22172aed81c030fd637c04879568bf148dc284894c1f050 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,678 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.5.0-py3-none-any.whl#sha256=679bb4410d23c305025726b5566d50cb102d9dcf9dece9c6440c41c98f34ab68 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,679 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.4.0-py3-none-any.whl#sha256=ee40ad9ae8e46f60a4f51b86ef07dcaeac5391f1e39ed564bee1bf4436d7f95d (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,679 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.3.0-py3-none-any.whl#sha256=35c1d357dc17b5dfc75411f43e1da47763253f1286d9444894133c6cd3b4f405 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,680 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.2.0-py3-none-any.whl#sha256=1b1af16389f98cf31245ae881e9e34a278f9471edb9d0e35245a93229ca805c7 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2024-06-28T09:12:05,680 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.1.0-py3-none-any.whl#sha256=df867ea07d049d0ce1dbb85b9780c70d50e109587590b7a02739747f92658b44 (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,681 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.0.0-py3-none-any.whl#sha256=f2846acab85ad1dc34638d1b784a37e2c9c2c66041833334cc253d96fd7e57ae (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,681 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.5-py3-none-any.whl#sha256=0d0478042b83eed708e02cdf9337d0b8e3685632738ade998595015b8acaa989 (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,682 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.1-py3-none-any.whl#sha256=517005c2ae19f73119ce95dc7047dcd26655fe743c057b1efa429a97da3654d4 (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,682 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.0-py3-none-any.whl#sha256=698da6cc3ec4ab8d8e315726dd8d17025e644a02c1b5ae95a58ab37325b6f28f (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,683 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.8.2-py3-none-any.whl#sha256=77220d3293b3c4db61349d2bec1fbe95f0dc663fb31bd7ad4943942350ca72df (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,684 Skipping link: No binaries permitted for orange3-singlecell: https://www.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.8.1-py3-none-any.whl#sha256=98475e522fb1f37626bdbd1bd5e1265e81180bd57ed6857f58afe58015b1e70c (from https://www.piwheels.org/simple/orange3-singlecell/) 2024-06-28T09:12:05,684 Skipping link: not a file: https://www.piwheels.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,685 Skipping link: not a file: https://pypi.org/simple/orange3-singlecell/ 2024-06-28T09:12:05,707 Given no hashes to check 1 links for project 'orange3-singlecell': discarding no candidates 2024-06-28T09:12:05,726 Collecting orange3-singlecell==1.7.2 2024-06-28T09:12:05,729 Created temporary directory: /tmp/pip-unpack-veqzrnrb 2024-06-28T09:12:05,943 Downloading orange3_singlecell-1.7.2.tar.gz (2.6 MB) 2024-06-28T09:12:06,927 Added orange3-singlecell==1.7.2 from https://files.pythonhosted.org/packages/72/85/0f6f5b459853b3755f25c82b519f313235de010730c1550abd40e5d585cc/orange3_singlecell-1.7.2.tar.gz to build tracker '/tmp/pip-build-tracker-_r3xc0ql' 2024-06-28T09:12:06,931 Created temporary directory: /tmp/pip-build-env-dip3pmc6 2024-06-28T09:12:06,936 Installing build dependencies: started 2024-06-28T09:12:06,937 Running command pip subprocess to install build dependencies 2024-06-28T09:12:08,341 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-06-28T09:12:08,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-06-28T09:12:10,313 Collecting setuptools 2024-06-28T09:12:10,327 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.1.1-py3-none-any.whl (883 kB) 2024-06-28T09:12:10,644 Collecting setuptools-scm 2024-06-28T09:12:10,705 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-06-28T09:12:11,125 Collecting wheel 2024-06-28T09:12:11,140 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-06-28T09:12:11,469 Collecting packaging>=20 (from setuptools-scm) 2024-06-28T09:12:11,488 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-06-28T09:12:14,049 Installing collected packages: wheel, setuptools, packaging, setuptools-scm 2024-06-28T09:12:14,275 Creating /tmp/pip-build-env-dip3pmc6/overlay/local/bin 2024-06-28T09:12:14,277 changing mode of /tmp/pip-build-env-dip3pmc6/overlay/local/bin/wheel to 755 2024-06-28T09:12:17,286 Successfully installed packaging-24.1 setuptools-70.1.1 setuptools-scm-8.1.0 wheel-0.43.0 2024-06-28T09:12:17,638 [notice] A new release of pip is available: 24.0 -> 24.1 2024-06-28T09:12:17,639 [notice] To update, run: python3 -m pip install --upgrade pip 2024-06-28T09:12:17,928 Installing build dependencies: finished with status 'done' 2024-06-28T09:12:17,932 Getting requirements to build wheel: started 2024-06-28T09:12:17,933 Running command Getting requirements to build wheel 2024-06-28T09:12:18,473 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2024-06-28T09:12:18,473 !! 2024-06-28T09:12:18,475 ******************************************************************************** 2024-06-28T09:12:18,475 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2024-06-28T09:12:18,476 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-06-28T09:12:18,477 ******************************************************************************** 2024-06-28T09:12:18,478 !! 2024-06-28T09:12:18,478 parsed = self.parsers.get(option_name, lambda x: x)(value) 2024-06-28T09:12:18,564 Getting requirements to build wheel: finished with status 'done' 2024-06-28T09:12:18,585 Created temporary directory: /tmp/pip-modern-metadata-5276o2d9 2024-06-28T09:12:18,588 Preparing metadata (pyproject.toml): started 2024-06-28T09:12:18,589 Running command Preparing metadata (pyproject.toml) 2024-06-28T09:12:19,128 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2024-06-28T09:12:19,128 Traceback (most recent call last): 2024-06-28T09:12:19,129 File "/tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject 2024-06-28T09:12:19,129 section = defn.get("tool", {})[tool_name] 2024-06-28T09:12:19,130 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ 2024-06-28T09:12:19,130 KeyError: 'setuptools_scm' 2024-06-28T09:12:19,194 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2024-06-28T09:12:19,194 !! 2024-06-28T09:12:19,195 ******************************************************************************** 2024-06-28T09:12:19,196 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2024-06-28T09:12:19,197 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-06-28T09:12:19,197 ******************************************************************************** 2024-06-28T09:12:19,198 !! 2024-06-28T09:12:19,198 parsed = self.parsers.get(option_name, lambda x: x)(value) 2024-06-28T09:12:19,224 running dist_info 2024-06-28T09:12:19,231 creating /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info 2024-06-28T09:12:19,236 writing /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/PKG-INFO 2024-06-28T09:12:19,242 writing dependency_links to /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/dependency_links.txt 2024-06-28T09:12:19,244 writing entry points to /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/entry_points.txt 2024-06-28T09:12:19,245 writing namespace_packages to /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/namespace_packages.txt 2024-06-28T09:12:19,247 writing requirements to /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/requires.txt 2024-06-28T09:12:19,248 writing top-level names to /tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/top_level.txt 2024-06-28T09:12:19,250 writing manifest file '/tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/SOURCES.txt' 2024-06-28T09:12:19,299 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-28T09:12:19,302 reading manifest file '/tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/SOURCES.txt' 2024-06-28T09:12:19,305 adding license file 'LICENSE' 2024-06-28T09:12:19,308 writing manifest file '/tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell.egg-info/SOURCES.txt' 2024-06-28T09:12:19,309 creating '/tmp/pip-modern-metadata-5276o2d9/Orange3_SingleCell-1.7.2.dist-info' 2024-06-28T09:12:19,452 Preparing metadata (pyproject.toml): finished with status 'done' 2024-06-28T09:12:19,456 Source in /tmp/pip-wheel-hai4vuce/orange3-singlecell_1b897d6de2214b99a65fa316614fc0ca has version 1.7.2, which satisfies requirement orange3-singlecell==1.7.2 from https://files.pythonhosted.org/packages/72/85/0f6f5b459853b3755f25c82b519f313235de010730c1550abd40e5d585cc/orange3_singlecell-1.7.2.tar.gz 2024-06-28T09:12:19,457 Removed orange3-singlecell==1.7.2 from https://files.pythonhosted.org/packages/72/85/0f6f5b459853b3755f25c82b519f313235de010730c1550abd40e5d585cc/orange3_singlecell-1.7.2.tar.gz from build tracker '/tmp/pip-build-tracker-_r3xc0ql' 2024-06-28T09:12:19,463 Created temporary directory: /tmp/pip-unpack-2t9cgwvq 2024-06-28T09:12:19,464 Created temporary directory: /tmp/pip-unpack-pon8byz3 2024-06-28T09:12:19,497 Building wheels for collected packages: orange3-singlecell 2024-06-28T09:12:19,501 Created temporary directory: /tmp/pip-wheel-jm9yxd6m 2024-06-28T09:12:19,502 Destination directory: /tmp/pip-wheel-jm9yxd6m 2024-06-28T09:12:19,504 Building wheel for orange3-singlecell (pyproject.toml): started 2024-06-28T09:12:19,505 Running command Building wheel for orange3-singlecell (pyproject.toml) 2024-06-28T09:12:20,031 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2024-06-28T09:12:20,032 Traceback (most recent call last): 2024-06-28T09:12:20,032 File "/tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject 2024-06-28T09:12:20,033 section = defn.get("tool", {})[tool_name] 2024-06-28T09:12:20,033 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ 2024-06-28T09:12:20,034 KeyError: 'setuptools_scm' 2024-06-28T09:12:20,096 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2024-06-28T09:12:20,097 !! 2024-06-28T09:12:20,098 ******************************************************************************** 2024-06-28T09:12:20,098 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2024-06-28T09:12:20,099 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-06-28T09:12:20,100 ******************************************************************************** 2024-06-28T09:12:20,101 !! 2024-06-28T09:12:20,101 parsed = self.parsers.get(option_name, lambda x: x)(value) 2024-06-28T09:12:20,117 running bdist_wheel 2024-06-28T09:12:20,167 running build 2024-06-28T09:12:20,168 running build_py 2024-06-28T09:12:20,176 creating build 2024-06-28T09:12:20,177 creating build/lib 2024-06-28T09:12:20,178 creating build/lib/orangecontrib 2024-06-28T09:12:20,179 copying orangecontrib/__init__.py -> build/lib/orangecontrib 2024-06-28T09:12:20,181 creating build/lib/orangecontrib/single_cell 2024-06-28T09:12:20,182 copying orangecontrib/single_cell/reader.py -> build/lib/orangecontrib/single_cell 2024-06-28T09:12:20,184 copying orangecontrib/single_cell/__init__.py -> build/lib/orangecontrib/single_cell 2024-06-28T09:12:20,187 creating build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,188 copying orangecontrib/single_cell/widgets/owscdatasets.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,190 copying orangecontrib/single_cell/widgets/owloaddata.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,192 copying orangecontrib/single_cell/widgets/owaligndatasets.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,195 copying orangecontrib/single_cell/widgets/contingency_table.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,198 copying orangecontrib/single_cell/widgets/owspatialautocorrelation.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,200 copying orangecontrib/single_cell/widgets/__init__.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,202 copying orangecontrib/single_cell/widgets/owmultisample.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,204 copying orangecontrib/single_cell/widgets/load_data.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,207 copying orangecontrib/single_cell/widgets/owdotmatrix.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,210 copying orangecontrib/single_cell/widgets/owscoregenes.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,213 copying orangecontrib/single_cell/widgets/owdropout.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,215 copying orangecontrib/single_cell/widgets/owbatchnorm.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,217 copying orangecontrib/single_cell/widgets/owscpreprocess.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,220 copying orangecontrib/single_cell/widgets/owfilter.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,222 copying orangecontrib/single_cell/widgets/owscorecells.py -> build/lib/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,225 creating build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,226 copying orangecontrib/single_cell/tests/test_owdropout.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,229 copying orangecontrib/single_cell/tests/test_owbatchnorm.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,230 copying orangecontrib/single_cell/tests/test_load_data.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,232 copying orangecontrib/single_cell/tests/test_owscoregenes.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,234 copying orangecontrib/single_cell/tests/test_owscorecells.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,236 copying orangecontrib/single_cell/tests/test_owfilter.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,237 copying orangecontrib/single_cell/tests/__init__.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,239 copying orangecontrib/single_cell/tests/test_owspatialautocorrelation.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,241 copying orangecontrib/single_cell/tests/test_owgenerank.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,243 copying orangecontrib/single_cell/tests/test_owmultisample.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,245 copying orangecontrib/single_cell/tests/test_owdatasets.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,247 copying orangecontrib/single_cell/tests/test_owloaddata.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,249 copying orangecontrib/single_cell/tests/test_owscpreprocess.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,251 copying orangecontrib/single_cell/tests/test_owaligndatasets.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,253 copying orangecontrib/single_cell/tests/test_owdotmatrix.py -> build/lib/orangecontrib/single_cell/tests 2024-06-28T09:12:20,256 creating build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,257 copying orangecontrib/single_cell/preprocess/alignment.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,259 copying orangecontrib/single_cell/preprocess/biweight.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,262 copying orangecontrib/single_cell/preprocess/scbnorm.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,264 copying orangecontrib/single_cell/preprocess/scpreprocess.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,266 copying orangecontrib/single_cell/preprocess/__init__.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,267 copying orangecontrib/single_cell/preprocess/cca.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,269 copying orangecontrib/single_cell/preprocess/clusteranalysis.py -> build/lib/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,272 creating build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,273 copying orangecontrib/single_cell/tests/preprocess/test_cca.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,275 copying orangecontrib/single_cell/tests/preprocess/test_alignment.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,277 copying orangecontrib/single_cell/tests/preprocess/__init__.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,278 copying orangecontrib/single_cell/tests/preprocess/test_scbnorm.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,280 copying orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,282 running egg_info 2024-06-28T09:12:20,289 writing Orange3_SingleCell.egg-info/PKG-INFO 2024-06-28T09:12:20,294 writing dependency_links to Orange3_SingleCell.egg-info/dependency_links.txt 2024-06-28T09:12:20,296 writing entry points to Orange3_SingleCell.egg-info/entry_points.txt 2024-06-28T09:12:20,297 writing namespace_packages to Orange3_SingleCell.egg-info/namespace_packages.txt 2024-06-28T09:12:20,300 writing requirements to Orange3_SingleCell.egg-info/requires.txt 2024-06-28T09:12:20,301 writing top-level names to Orange3_SingleCell.egg-info/top_level.txt 2024-06-28T09:12:20,335 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-06-28T09:12:20,338 reading manifest file 'Orange3_SingleCell.egg-info/SOURCES.txt' 2024-06-28T09:12:20,355 adding license file 'LICENSE' 2024-06-28T09:12:20,361 writing manifest file 'Orange3_SingleCell.egg-info/SOURCES.txt' 2024-06-28T09:12:20,366 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.preprocess.data' is absent from the `packages` configuration. 2024-06-28T09:12:20,366 !! 2024-06-28T09:12:20,367 ******************************************************************************** 2024-06-28T09:12:20,368 ############################ 2024-06-28T09:12:20,368 # Package would be ignored # 2024-06-28T09:12:20,369 ############################ 2024-06-28T09:12:20,369 Python recognizes 'orangecontrib.single_cell.preprocess.data' as an importable package[^1], 2024-06-28T09:12:20,370 but it is absent from setuptools' `packages` configuration. 2024-06-28T09:12:20,371 This leads to an ambiguous overall configuration. If you want to distribute this 2024-06-28T09:12:20,372 package, please make sure that 'orangecontrib.single_cell.preprocess.data' is explicitly added 2024-06-28T09:12:20,372 to the `packages` configuration field. 2024-06-28T09:12:20,374 Alternatively, you can also rely on setuptools' discovery methods 2024-06-28T09:12:20,374 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-06-28T09:12:20,374 instead of `find_packages(...)`/`find:`). 2024-06-28T09:12:20,376 You can read more about "package discovery" on setuptools documentation page: 2024-06-28T09:12:20,377 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-06-28T09:12:20,378 If you don't want 'orangecontrib.single_cell.preprocess.data' to be distributed and are 2024-06-28T09:12:20,378 already explicitly excluding 'orangecontrib.single_cell.preprocess.data' via 2024-06-28T09:12:20,379 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-06-28T09:12:20,379 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-06-28T09:12:20,380 combination with a more fine grained `package-data` configuration. 2024-06-28T09:12:20,381 You can read more about "package data files" on setuptools documentation page: 2024-06-28T09:12:20,382 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-06-28T09:12:20,384 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-06-28T09:12:20,384 even if it does not contain any `.py` files. 2024-06-28T09:12:20,385 On the other hand, currently there is no concept of package data 2024-06-28T09:12:20,385 directory, all directories are treated like packages. 2024-06-28T09:12:20,386 ******************************************************************************** 2024-06-28T09:12:20,387 !! 2024-06-28T09:12:20,387 check.warn(importable) 2024-06-28T09:12:20,388 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.tests.data' is absent from the `packages` configuration. 2024-06-28T09:12:20,389 !! 2024-06-28T09:12:20,390 ******************************************************************************** 2024-06-28T09:12:20,390 ############################ 2024-06-28T09:12:20,391 # Package would be ignored # 2024-06-28T09:12:20,391 ############################ 2024-06-28T09:12:20,391 Python recognizes 'orangecontrib.single_cell.tests.data' as an importable package[^1], 2024-06-28T09:12:20,392 but it is absent from setuptools' `packages` configuration. 2024-06-28T09:12:20,393 This leads to an ambiguous overall configuration. If you want to distribute this 2024-06-28T09:12:20,393 package, please make sure that 'orangecontrib.single_cell.tests.data' is explicitly added 2024-06-28T09:12:20,393 to the `packages` configuration field. 2024-06-28T09:12:20,394 Alternatively, you can also rely on setuptools' discovery methods 2024-06-28T09:12:20,395 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-06-28T09:12:20,395 instead of `find_packages(...)`/`find:`). 2024-06-28T09:12:20,396 You can read more about "package discovery" on setuptools documentation page: 2024-06-28T09:12:20,397 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-06-28T09:12:20,398 If you don't want 'orangecontrib.single_cell.tests.data' to be distributed and are 2024-06-28T09:12:20,398 already explicitly excluding 'orangecontrib.single_cell.tests.data' via 2024-06-28T09:12:20,399 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-06-28T09:12:20,399 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-06-28T09:12:20,400 combination with a more fine grained `package-data` configuration. 2024-06-28T09:12:20,401 You can read more about "package data files" on setuptools documentation page: 2024-06-28T09:12:20,402 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-06-28T09:12:20,403 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-06-28T09:12:20,404 even if it does not contain any `.py` files. 2024-06-28T09:12:20,404 On the other hand, currently there is no concept of package data 2024-06-28T09:12:20,405 directory, all directories are treated like packages. 2024-06-28T09:12:20,405 ******************************************************************************** 2024-06-28T09:12:20,406 !! 2024-06-28T09:12:20,407 check.warn(importable) 2024-06-28T09:12:20,407 /tmp/pip-build-env-dip3pmc6/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.widgets.icons' is absent from the `packages` configuration. 2024-06-28T09:12:20,408 !! 2024-06-28T09:12:20,409 ******************************************************************************** 2024-06-28T09:12:20,409 ############################ 2024-06-28T09:12:20,410 # Package would be ignored # 2024-06-28T09:12:20,410 ############################ 2024-06-28T09:12:20,411 Python recognizes 'orangecontrib.single_cell.widgets.icons' as an importable package[^1], 2024-06-28T09:12:20,411 but it is absent from setuptools' `packages` configuration. 2024-06-28T09:12:20,412 This leads to an ambiguous overall configuration. If you want to distribute this 2024-06-28T09:12:20,413 package, please make sure that 'orangecontrib.single_cell.widgets.icons' is explicitly added 2024-06-28T09:12:20,413 to the `packages` configuration field. 2024-06-28T09:12:20,414 Alternatively, you can also rely on setuptools' discovery methods 2024-06-28T09:12:20,415 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-06-28T09:12:20,415 instead of `find_packages(...)`/`find:`). 2024-06-28T09:12:20,416 You can read more about "package discovery" on setuptools documentation page: 2024-06-28T09:12:20,417 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-06-28T09:12:20,418 If you don't want 'orangecontrib.single_cell.widgets.icons' to be distributed and are 2024-06-28T09:12:20,419 already explicitly excluding 'orangecontrib.single_cell.widgets.icons' via 2024-06-28T09:12:20,419 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-06-28T09:12:20,419 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-06-28T09:12:20,420 combination with a more fine grained `package-data` configuration. 2024-06-28T09:12:20,420 You can read more about "package data files" on setuptools documentation page: 2024-06-28T09:12:20,421 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-06-28T09:12:20,423 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-06-28T09:12:20,423 even if it does not contain any `.py` files. 2024-06-28T09:12:20,424 On the other hand, currently there is no concept of package data 2024-06-28T09:12:20,424 directory, all directories are treated like packages. 2024-06-28T09:12:20,424 ******************************************************************************** 2024-06-28T09:12:20,426 !! 2024-06-28T09:12:20,426 check.warn(importable) 2024-06-28T09:12:20,426 creating build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,427 copying orangecontrib/single_cell/widgets/icons/AlignDatasets.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,427 copying orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,428 copying orangecontrib/single_cell/widgets/icons/Binarize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,428 copying orangecontrib/single_cell/widgets/icons/DotMatrix.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,429 copying orangecontrib/single_cell/widgets/icons/Dropout.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,429 copying orangecontrib/single_cell/widgets/icons/Filter.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,430 copying orangecontrib/single_cell/widgets/icons/LoadData.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,430 copying orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,431 copying orangecontrib/single_cell/widgets/icons/MarkerGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,431 copying orangecontrib/single_cell/widgets/icons/MultiSample.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,432 copying orangecontrib/single_cell/widgets/icons/Normalize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,432 copying orangecontrib/single_cell/widgets/icons/Rank.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,433 copying orangecontrib/single_cell/widgets/icons/ScoreCells.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,433 copying orangecontrib/single_cell/widgets/icons/ScoreGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,434 copying orangecontrib/single_cell/widgets/icons/SelectGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,434 copying orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,435 copying orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,435 copying orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,436 copying orangecontrib/single_cell/widgets/icons/Standardize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,437 copying orangecontrib/single_cell/widgets/icons/VCFFile.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,437 copying orangecontrib/single_cell/widgets/icons/category.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,438 creating build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,438 copying orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,439 copying orangecontrib/single_cell/tests/data/data.csv -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,439 copying orangecontrib/single_cell/tests/data/data.loom -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,439 copying orangecontrib/single_cell/tests/data/data.pkl -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,440 copying orangecontrib/single_cell/tests/data/data.txt.gz -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,440 copying orangecontrib/single_cell/tests/data/data.xls -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,443 copying orangecontrib/single_cell/tests/data/data.xlsx -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,446 copying orangecontrib/single_cell/tests/data/data_dense.h5ad -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,448 copying orangecontrib/single_cell/tests/data/data_sparse.h5ad -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,451 copying orangecontrib/single_cell/tests/data/dermatology.tab -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,454 copying orangecontrib/single_cell/tests/data/lib.cell.count -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,456 copying orangecontrib/single_cell/tests/data/lib.cell.meta -> build/lib/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,457 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data 2024-06-28T09:12:20,458 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,459 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,461 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,464 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,467 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,468 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,470 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,473 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,476 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,476 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,478 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,481 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,484 creating build/lib/orangecontrib/single_cell/tests/data/10x 2024-06-28T09:12:20,484 creating build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,485 copying orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,487 copying orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,489 copying orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,491 creating build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,491 copying orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,494 copying orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,495 copying orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,497 creating build/lib/orangecontrib/single_cell/preprocess/data 2024-06-28T09:12:20,498 copying orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle -> build/lib/orangecontrib/single_cell/preprocess/data 2024-06-28T09:12:20,641 installing to build/bdist.linux-armv7l/wheel 2024-06-28T09:12:20,641 running install 2024-06-28T09:12:20,666 running install_lib 2024-06-28T09:12:20,675 Skipping installation of build/bdist.linux-armv7l/wheel/orangecontrib/__init__.py (namespace package) 2024-06-28T09:12:20,676 copying orangecontrib/single_cell/reader.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell 2024-06-28T09:12:20,680 copying orangecontrib/single_cell/__init__.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell 2024-06-28T09:12:20,683 copying orangecontrib/single_cell/widgets/owscdatasets.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,686 copying orangecontrib/single_cell/widgets/owloaddata.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,689 copying orangecontrib/single_cell/widgets/owaligndatasets.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,692 copying orangecontrib/single_cell/widgets/contingency_table.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,695 copying orangecontrib/single_cell/widgets/owspatialautocorrelation.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,698 copying orangecontrib/single_cell/widgets/__init__.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,700 copying orangecontrib/single_cell/widgets/owmultisample.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,703 copying orangecontrib/single_cell/widgets/load_data.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,706 copying orangecontrib/single_cell/widgets/owdotmatrix.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,709 copying orangecontrib/single_cell/widgets/owscoregenes.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,712 copying orangecontrib/single_cell/widgets/owdropout.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,715 copying orangecontrib/single_cell/widgets/owbatchnorm.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,718 copying orangecontrib/single_cell/widgets/owscpreprocess.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,721 copying orangecontrib/single_cell/widgets/owfilter.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,724 copying orangecontrib/single_cell/widgets/owscorecells.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets 2024-06-28T09:12:20,727 copying orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,729 copying orangecontrib/single_cell/widgets/icons/MarkerGenes.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,731 copying orangecontrib/single_cell/widgets/icons/VCFFile.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,733 copying orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,734 copying orangecontrib/single_cell/widgets/icons/ScoreGenes.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,739 copying orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,741 copying orangecontrib/single_cell/widgets/icons/ScoreCells.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,743 copying orangecontrib/single_cell/widgets/icons/Binarize.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,745 copying orangecontrib/single_cell/widgets/icons/AlignDatasets.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,747 copying orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,749 copying orangecontrib/single_cell/widgets/icons/LoadData.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,751 copying orangecontrib/single_cell/widgets/icons/category.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,753 copying orangecontrib/single_cell/widgets/icons/Dropout.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,755 copying orangecontrib/single_cell/widgets/icons/MultiSample.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,757 copying orangecontrib/single_cell/widgets/icons/Filter.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,759 copying orangecontrib/single_cell/widgets/icons/SelectGenes.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,762 copying orangecontrib/single_cell/widgets/icons/Rank.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,764 copying orangecontrib/single_cell/widgets/icons/Normalize.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,766 copying orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,768 copying orangecontrib/single_cell/widgets/icons/DotMatrix.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,771 copying orangecontrib/single_cell/widgets/icons/Standardize.svg -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/widgets/icons 2024-06-28T09:12:20,774 copying orangecontrib/single_cell/tests/test_owdropout.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,777 copying orangecontrib/single_cell/tests/test_owbatchnorm.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,779 copying orangecontrib/single_cell/tests/test_load_data.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,781 copying orangecontrib/single_cell/tests/test_owscoregenes.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,783 copying orangecontrib/single_cell/tests/test_owscorecells.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,785 copying orangecontrib/single_cell/tests/test_owfilter.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,787 copying orangecontrib/single_cell/tests/__init__.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,789 copying orangecontrib/single_cell/tests/test_owspatialautocorrelation.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,791 copying orangecontrib/single_cell/tests/test_owgenerank.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,794 copying orangecontrib/single_cell/tests/test_owmultisample.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,796 copying orangecontrib/single_cell/tests/test_owdatasets.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,798 copying orangecontrib/single_cell/tests/test_owloaddata.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,801 copying orangecontrib/single_cell/tests/test_owscpreprocess.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,803 copying orangecontrib/single_cell/tests/test_owaligndatasets.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,805 copying orangecontrib/single_cell/tests/test_owdotmatrix.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests 2024-06-28T09:12:20,809 copying orangecontrib/single_cell/tests/data/lib.cell.count -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,811 copying orangecontrib/single_cell/tests/data/data.txt.gz -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,813 copying orangecontrib/single_cell/tests/data/data_dense.h5ad -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,816 copying orangecontrib/single_cell/tests/data/dermatology.tab -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,819 copying orangecontrib/single_cell/tests/data/data.xlsx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,822 copying orangecontrib/single_cell/tests/data/data.pkl -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,824 copying orangecontrib/single_cell/tests/data/data.xls -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,827 copying orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,829 copying orangecontrib/single_cell/tests/data/data.loom -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,832 copying orangecontrib/single_cell/tests/data/data.csv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,834 copying orangecontrib/single_cell/tests/data/lib.cell.meta -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,837 copying orangecontrib/single_cell/tests/data/data_sparse.h5ad -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data 2024-06-28T09:12:20,840 copying orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,844 copying orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,845 copying orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/mm10 2024-06-28T09:12:20,848 copying orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,850 copying orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,852 copying orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/10x/hg19 2024-06-28T09:12:20,855 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,858 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,861 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2024-06-28T09:12:20,864 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,867 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,870 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2024-06-28T09:12:20,873 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,875 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,878 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2024-06-28T09:12:20,881 copying orangecontrib/single_cell/tests/preprocess/test_cca.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,884 copying orangecontrib/single_cell/tests/preprocess/test_alignment.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,886 copying orangecontrib/single_cell/tests/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,888 copying orangecontrib/single_cell/tests/preprocess/test_scbnorm.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,891 copying orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/tests/preprocess 2024-06-28T09:12:20,894 copying orangecontrib/single_cell/preprocess/alignment.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,897 copying orangecontrib/single_cell/preprocess/biweight.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,900 copying orangecontrib/single_cell/preprocess/scbnorm.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,903 copying orangecontrib/single_cell/preprocess/scpreprocess.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,905 copying orangecontrib/single_cell/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,907 copying orangecontrib/single_cell/preprocess/cca.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,910 copying orangecontrib/single_cell/preprocess/clusteranalysis.py -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess 2024-06-28T09:12:20,913 copying orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle -> build/bdist.linux-armv7l/wheel/orangecontrib/single_cell/preprocess/data 2024-06-28T09:12:21,035 running install_egg_info 2024-06-28T09:12:21,046 Copying Orange3_SingleCell.egg-info to build/bdist.linux-armv7l/wheel/Orange3_SingleCell-1.7.2-py3.11.egg-info 2024-06-28T09:12:21,074 Installing build/bdist.linux-armv7l/wheel/Orange3_SingleCell-1.7.2-py3.11-nspkg.pth 2024-06-28T09:12:21,076 running install_scripts 2024-06-28T09:12:21,100 creating build/bdist.linux-armv7l/wheel/Orange3_SingleCell-1.7.2.dist-info/WHEEL 2024-06-28T09:12:21,103 creating '/tmp/pip-wheel-jm9yxd6m/.tmp-i1p6yjho/Orange3_SingleCell-1.7.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-06-28T09:12:21,105 adding 'Orange3_SingleCell-1.7.2-py3.11-nspkg.pth' 2024-06-28T09:12:21,109 adding 'orangecontrib/single_cell/__init__.py' 2024-06-28T09:12:21,111 adding 'orangecontrib/single_cell/reader.py' 2024-06-28T09:12:21,113 adding 'orangecontrib/single_cell/preprocess/__init__.py' 2024-06-28T09:12:21,115 adding 'orangecontrib/single_cell/preprocess/alignment.py' 2024-06-28T09:12:21,119 adding 'orangecontrib/single_cell/preprocess/biweight.py' 2024-06-28T09:12:21,121 adding 'orangecontrib/single_cell/preprocess/cca.py' 2024-06-28T09:12:21,124 adding 'orangecontrib/single_cell/preprocess/clusteranalysis.py' 2024-06-28T09:12:21,126 adding 'orangecontrib/single_cell/preprocess/scbnorm.py' 2024-06-28T09:12:21,129 adding 'orangecontrib/single_cell/preprocess/scpreprocess.py' 2024-06-28T09:12:21,384 adding 'orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle' 2024-06-28T09:12:21,438 adding 'orangecontrib/single_cell/tests/__init__.py' 2024-06-28T09:12:21,440 adding 'orangecontrib/single_cell/tests/test_load_data.py' 2024-06-28T09:12:21,442 adding 'orangecontrib/single_cell/tests/test_owaligndatasets.py' 2024-06-28T09:12:21,443 adding 'orangecontrib/single_cell/tests/test_owbatchnorm.py' 2024-06-28T09:12:21,445 adding 'orangecontrib/single_cell/tests/test_owdatasets.py' 2024-06-28T09:12:21,447 adding 'orangecontrib/single_cell/tests/test_owdotmatrix.py' 2024-06-28T09:12:21,449 adding 'orangecontrib/single_cell/tests/test_owdropout.py' 2024-06-28T09:12:21,451 adding 'orangecontrib/single_cell/tests/test_owfilter.py' 2024-06-28T09:12:21,453 adding 'orangecontrib/single_cell/tests/test_owgenerank.py' 2024-06-28T09:12:21,455 adding 'orangecontrib/single_cell/tests/test_owloaddata.py' 2024-06-28T09:12:21,457 adding 'orangecontrib/single_cell/tests/test_owmultisample.py' 2024-06-28T09:12:21,459 adding 'orangecontrib/single_cell/tests/test_owscorecells.py' 2024-06-28T09:12:21,460 adding 'orangecontrib/single_cell/tests/test_owscoregenes.py' 2024-06-28T09:12:21,462 adding 'orangecontrib/single_cell/tests/test_owscpreprocess.py' 2024-06-28T09:12:21,464 adding 'orangecontrib/single_cell/tests/test_owspatialautocorrelation.py' 2024-06-28T09:12:21,466 adding 'orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt' 2024-06-28T09:12:21,468 adding 'orangecontrib/single_cell/tests/data/data.csv' 2024-06-28T09:12:21,470 adding 'orangecontrib/single_cell/tests/data/data.loom' 2024-06-28T09:12:21,472 adding 'orangecontrib/single_cell/tests/data/data.pkl' 2024-06-28T09:12:21,473 adding 'orangecontrib/single_cell/tests/data/data.txt.gz' 2024-06-28T09:12:21,476 adding 'orangecontrib/single_cell/tests/data/data.xls' 2024-06-28T09:12:21,478 adding 'orangecontrib/single_cell/tests/data/data.xlsx' 2024-06-28T09:12:21,480 adding 'orangecontrib/single_cell/tests/data/data_dense.h5ad' 2024-06-28T09:12:21,482 adding 'orangecontrib/single_cell/tests/data/data_sparse.h5ad' 2024-06-28T09:12:21,487 adding 'orangecontrib/single_cell/tests/data/dermatology.tab' 2024-06-28T09:12:21,488 adding 'orangecontrib/single_cell/tests/data/lib.cell.count' 2024-06-28T09:12:21,489 adding 'orangecontrib/single_cell/tests/data/lib.cell.meta' 2024-06-28T09:12:21,491 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv' 2024-06-28T09:12:21,493 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv' 2024-06-28T09:12:21,496 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx' 2024-06-28T09:12:21,498 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv' 2024-06-28T09:12:21,500 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv' 2024-06-28T09:12:21,503 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx' 2024-06-28T09:12:21,505 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv' 2024-06-28T09:12:21,507 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv' 2024-06-28T09:12:21,511 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx' 2024-06-28T09:12:21,513 adding 'orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv' 2024-06-28T09:12:21,514 adding 'orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv' 2024-06-28T09:12:21,515 adding 'orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx' 2024-06-28T09:12:21,517 adding 'orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv' 2024-06-28T09:12:21,518 adding 'orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv' 2024-06-28T09:12:21,519 adding 'orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx' 2024-06-28T09:12:21,521 adding 'orangecontrib/single_cell/tests/preprocess/__init__.py' 2024-06-28T09:12:21,522 adding 'orangecontrib/single_cell/tests/preprocess/test_alignment.py' 2024-06-28T09:12:21,523 adding 'orangecontrib/single_cell/tests/preprocess/test_cca.py' 2024-06-28T09:12:21,525 adding 'orangecontrib/single_cell/tests/preprocess/test_scbnorm.py' 2024-06-28T09:12:21,527 adding 'orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py' 2024-06-28T09:12:21,529 adding 'orangecontrib/single_cell/widgets/__init__.py' 2024-06-28T09:12:21,531 adding 'orangecontrib/single_cell/widgets/contingency_table.py' 2024-06-28T09:12:21,535 adding 'orangecontrib/single_cell/widgets/load_data.py' 2024-06-28T09:12:21,538 adding 'orangecontrib/single_cell/widgets/owaligndatasets.py' 2024-06-28T09:12:21,540 adding 'orangecontrib/single_cell/widgets/owbatchnorm.py' 2024-06-28T09:12:21,542 adding 'orangecontrib/single_cell/widgets/owdotmatrix.py' 2024-06-28T09:12:21,545 adding 'orangecontrib/single_cell/widgets/owdropout.py' 2024-06-28T09:12:21,550 adding 'orangecontrib/single_cell/widgets/owfilter.py' 2024-06-28T09:12:21,553 adding 'orangecontrib/single_cell/widgets/owloaddata.py' 2024-06-28T09:12:21,556 adding 'orangecontrib/single_cell/widgets/owmultisample.py' 2024-06-28T09:12:21,557 adding 'orangecontrib/single_cell/widgets/owscdatasets.py' 2024-06-28T09:12:21,559 adding 'orangecontrib/single_cell/widgets/owscorecells.py' 2024-06-28T09:12:21,563 adding 'orangecontrib/single_cell/widgets/owscoregenes.py' 2024-06-28T09:12:21,566 adding 'orangecontrib/single_cell/widgets/owscpreprocess.py' 2024-06-28T09:12:21,568 adding 'orangecontrib/single_cell/widgets/owspatialautocorrelation.py' 2024-06-28T09:12:21,570 adding 'orangecontrib/single_cell/widgets/icons/AlignDatasets.svg' 2024-06-28T09:12:21,571 adding 'orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg' 2024-06-28T09:12:21,572 adding 'orangecontrib/single_cell/widgets/icons/Binarize.svg' 2024-06-28T09:12:21,573 adding 'orangecontrib/single_cell/widgets/icons/DotMatrix.svg' 2024-06-28T09:12:21,574 adding 'orangecontrib/single_cell/widgets/icons/Dropout.svg' 2024-06-28T09:12:21,575 adding 'orangecontrib/single_cell/widgets/icons/Filter.svg' 2024-06-28T09:12:21,576 adding 'orangecontrib/single_cell/widgets/icons/LoadData.svg' 2024-06-28T09:12:21,578 adding 'orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg' 2024-06-28T09:12:21,579 adding 'orangecontrib/single_cell/widgets/icons/MarkerGenes.svg' 2024-06-28T09:12:21,580 adding 'orangecontrib/single_cell/widgets/icons/MultiSample.svg' 2024-06-28T09:12:21,581 adding 'orangecontrib/single_cell/widgets/icons/Normalize.svg' 2024-06-28T09:12:21,582 adding 'orangecontrib/single_cell/widgets/icons/Rank.svg' 2024-06-28T09:12:21,584 adding 'orangecontrib/single_cell/widgets/icons/ScoreCells.svg' 2024-06-28T09:12:21,585 adding 'orangecontrib/single_cell/widgets/icons/ScoreGenes.svg' 2024-06-28T09:12:21,587 adding 'orangecontrib/single_cell/widgets/icons/SelectGenes.svg' 2024-06-28T09:12:21,588 adding 'orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg' 2024-06-28T09:12:21,589 adding 'orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg' 2024-06-28T09:12:21,590 adding 'orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg' 2024-06-28T09:12:21,592 adding 'orangecontrib/single_cell/widgets/icons/Standardize.svg' 2024-06-28T09:12:21,593 adding 'orangecontrib/single_cell/widgets/icons/VCFFile.svg' 2024-06-28T09:12:21,594 adding 'orangecontrib/single_cell/widgets/icons/category.svg' 2024-06-28T09:12:21,595 adding 'Orange3_SingleCell-1.7.2.dist-info/LICENSE' 2024-06-28T09:12:21,596 adding 'Orange3_SingleCell-1.7.2.dist-info/METADATA' 2024-06-28T09:12:21,597 adding 'Orange3_SingleCell-1.7.2.dist-info/WHEEL' 2024-06-28T09:12:21,598 adding 'Orange3_SingleCell-1.7.2.dist-info/entry_points.txt' 2024-06-28T09:12:21,599 adding 'Orange3_SingleCell-1.7.2.dist-info/namespace_packages.txt' 2024-06-28T09:12:21,600 adding 'Orange3_SingleCell-1.7.2.dist-info/top_level.txt' 2024-06-28T09:12:21,602 adding 'Orange3_SingleCell-1.7.2.dist-info/RECORD' 2024-06-28T09:12:21,612 removing build/bdist.linux-armv7l/wheel 2024-06-28T09:12:21,736 Building wheel for orange3-singlecell (pyproject.toml): finished with status 'done' 2024-06-28T09:12:21,756 Created wheel for orange3-singlecell: filename=Orange3_SingleCell-1.7.2-py3-none-any.whl size=798819 sha256=2ee3aad8c70a47501888cf554a76ef27bb55cc08954903e5651bcaa046f492d1 2024-06-28T09:12:21,757 Stored in directory: /tmp/pip-ephem-wheel-cache-4vpxkel0/wheels/f3/63/19/5f05424f82c1d931aa99f197299f4ed01d59498da1a0155cb3 2024-06-28T09:12:21,771 Successfully built orange3-singlecell 2024-06-28T09:12:21,795 Removed build tracker: '/tmp/pip-build-tracker-_r3xc0ql'