2024-07-04T15:10:26,796 Created temporary directory: /tmp/pip-build-tracker-pur9_2xz 2024-07-04T15:10:26,797 Initialized build tracking at /tmp/pip-build-tracker-pur9_2xz 2024-07-04T15:10:26,798 Created build tracker: /tmp/pip-build-tracker-pur9_2xz 2024-07-04T15:10:26,798 Entered build tracker: /tmp/pip-build-tracker-pur9_2xz 2024-07-04T15:10:26,799 Created temporary directory: /tmp/pip-wheel-o1hl993l 2024-07-04T15:10:26,802 Created temporary directory: /tmp/pip-ephem-wheel-cache-dew9w_qo 2024-07-04T15:10:26,824 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-04T15:10:26,827 2 location(s) to search for versions of dadi: 2024-07-04T15:10:26,827 * https://pypi.org/simple/dadi/ 2024-07-04T15:10:26,827 * https://www.piwheels.org/simple/dadi/ 2024-07-04T15:10:26,828 Fetching project page and analyzing links: https://pypi.org/simple/dadi/ 2024-07-04T15:10:26,828 Getting page https://pypi.org/simple/dadi/ 2024-07-04T15:10:26,830 Found index url https://pypi.org/simple/ 2024-07-04T15:10:27,041 Fetched page https://pypi.org/simple/dadi/ as application/vnd.pypi.simple.v1+json 2024-07-04T15:10:27,048 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a0/90/3c79d2526f0a8d618db53d12845c82e0c4da4d26e8cf3180a7d7074f348a/dadi-1.9.92-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,049 Found link https://files.pythonhosted.org/packages/41/b7/79564b96938451691e1505554798f4d62748ea25d64bf589e883455938da/dadi-1.9.92.tar.gz (from https://pypi.org/simple/dadi/), version: 1.9.92 2024-07-04T15:10:27,050 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/53/5e/fea903fd0c54bdd9d87e9d0a8e552204f4596bcbb40173d469742ac1ab6d/dadi-2.0.1-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,050 Found link https://files.pythonhosted.org/packages/06/94/dbf599959d8a04ea52c520414d1af185a8f57cd2c2be7181af97e927852a/dadi-2.0.1.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.1 2024-07-04T15:10:27,051 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2e/b8/8b868a117552fde24a5d513e8673fa059bd106fc87c1bb8743b000cc343d/dadi-2.0.2-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,051 Found link https://files.pythonhosted.org/packages/05/3c/0679df7beac434aa1dfaae53ef4b1717d849dcc8b7eadf2ef0f42545f22c/dadi-2.0.2.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.2 2024-07-04T15:10:27,052 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2b/87/9645c8580abd51d5be25532f7927e067020cf03871b5a1468c29849a72af/dadi-2.0.3-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,053 Found link https://files.pythonhosted.org/packages/20/43/6bb9b18f73e31701eeff2f69ca3964ea8ce483bd444ecb4c8bc3a20350f1/dadi-2.0.3.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.3 2024-07-04T15:10:27,053 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/3b/59/aef8d0105a55ea7024c0fdae8b5d981bc02ae2dce6c962a3ab5c838c87ee/dadi-2.0.4-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,054 Found link https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.4 2024-07-04T15:10:27,055 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/b9/12/7c937c7d55f57f519b15ae85b3a893915a91aeddeb86b60d204d9b8a0b95/dadi-2.0.5-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,055 Found link https://files.pythonhosted.org/packages/1d/79/b0703bf0a3bccfd46243719970c4c12ef9d25702c1c1f11a38cd858feeba/dadi-2.0.5.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.5 2024-07-04T15:10:27,056 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/bf/ec/4028c2bc860bc5fd000757a85580f06d372cf0093ad3d69fc337f4e3638f/dadi-2.0.6-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,056 Found link https://files.pythonhosted.org/packages/8f/37/bd2a39f621a56e9c48d8bfe234583e1de6548c78fb56ada775e0f660ecd4/dadi-2.0.6.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.6 2024-07-04T15:10:27,057 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/68/7a/555e1602617ed94760f124020cd81e93387a50111223161fa1aef70fc203/dadi-2.1.0-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,058 Found link https://files.pythonhosted.org/packages/ef/2d/b8636392a28b5d7fe2665a15ab9899651ed7e2af7264c8685e648371aa5c/dadi-2.1.0.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.0 2024-07-04T15:10:27,058 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a9/c7/ee88baf9a99dcca548908e6ecada3994098b18084ee3b796600b471eaa0c/dadi-2.1.1-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,059 Found link https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.1 2024-07-04T15:10:27,059 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/1b/7c/1d9cc47d8c3e0b5b66c33d780964b21d53025941d39c545a0c6f58f73e97/dadi-2.1.2-cp39-cp39-macosx_12_0_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,060 Found link https://files.pythonhosted.org/packages/10/c2/90726e2b680e9e4819abbba3fc4bf7ba947c70d96cb7c4f831e99823eb22/dadi-2.1.2.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.2 2024-07-04T15:10:27,060 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/06/7b/3e77ba75ebf371859811d1bb8d461542bb0ed2f65ff353dda524a93c211f/dadi-2.2.0-cp39-cp39-macosx_12_0_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T15:10:27,061 Found link https://files.pythonhosted.org/packages/48/db/c49468bb195a119526715367ec04e667af01f5c6cf147ef90820b0beb617/dadi-2.2.0.tar.gz (from https://pypi.org/simple/dadi/), version: 2.2.0 2024-07-04T15:10:27,062 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/4b/1a/2b2910fc31276a0beea0113c1b1b77f9016c2e36048ed7b1edd41506de96/dadi-2.3.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,063 Found link https://files.pythonhosted.org/packages/1c/c6/bdf4461a4fabc7719de6aa26b5a0781463a0f0ced57484f9e2f882e065f3/dadi-2.3.0.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.0 2024-07-04T15:10:27,063 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/b4/65/2b336a01a7ea2ddd0a10e5fe6ade2c92f27c3dcd8675aba7ca646709b977/dadi-2.3.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,064 Found link https://files.pythonhosted.org/packages/08/80/99c8ba23ad3d7dae30aa6e62a25acb3cb9b1c07c4086d11f6f8e6924ff49/dadi-2.3.1.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.1 2024-07-04T15:10:27,065 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/cd/83/2123d7020476d22b48a024c5f35a2e49526d21e02e6a9cf77470c5e77369/dadi-2.3.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,066 Found link https://files.pythonhosted.org/packages/e0/69/13ec113d0b5a001bc558a07810cb6562281b2139f2f88459ebf023795572/dadi-2.3.2.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.2 2024-07-04T15:10:27,066 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/11/10/54dddd9308d6d23633631dd1b2ff6e1a1c69b68a44ed89298ff4bc0d28f6/dadi-2.3.3-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,067 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/0a/d2/1c8329a90e61870f4b398690d57a7ab72fec30358848849714272a622ca3/dadi-2.3.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,068 Found link https://files.pythonhosted.org/packages/9b/17/d309afa9d576d42453d894a1cddb71c5872530097b9e6ec4cf78ed8a759e/dadi-2.3.3.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.3 2024-07-04T15:10:27,069 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/54/26/d26545c696d9c512088c31229c78bf5d37bafc4098cda68aa7bb9b9fb4ce/dadi-2.3.4-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,069 Found link https://files.pythonhosted.org/packages/99/ec/a28a521b127c4ca0d5281e711b9c8d4e5a37a6b7c01532f1063b5547badd/dadi-2.3.4.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.4 2024-07-04T15:10:27,070 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/97/d8/e013acdd0e8f16298ed5981e7ce33a7122ce0abe34412d73250ef073b888/dadi-2.3.5-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,071 Found link https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.5 2024-07-04T15:10:27,071 Fetching project page and analyzing links: https://www.piwheels.org/simple/dadi/ 2024-07-04T15:10:27,072 Getting page https://www.piwheels.org/simple/dadi/ 2024-07-04T15:10:27,073 Found index url https://www.piwheels.org/simple/ 2024-07-04T15:10:27,243 Fetched page https://www.piwheels.org/simple/dadi/ as text/html 2024-07-04T15:10:27,262 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp311-cp311-linux_armv6l.whl#sha256=8cc260a7556237fa9ab41be3614bee9586972d65e0c95758fed0fb6d13dd9333 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,262 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp311-cp311-linux_armv7l.whl#sha256=8cc260a7556237fa9ab41be3614bee9586972d65e0c95758fed0fb6d13dd9333 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,263 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=007669fc83201d0dc2ad0275621c926895d68f31bd6284dab1488d77fb663986 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,263 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=007669fc83201d0dc2ad0275621c926895d68f31bd6284dab1488d77fb663986 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,264 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp311-cp311-linux_armv6l.whl#sha256=9d7c7ecfe3a16d68eca1dbb5280842342bbb73ae8bbdb6a3502e4321e92e88f8 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,265 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp311-cp311-linux_armv7l.whl#sha256=9d7c7ecfe3a16d68eca1dbb5280842342bbb73ae8bbdb6a3502e4321e92e88f8 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,265 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=48d46786c5f7eb5ac7649da69fbcb6eee9869785e7c4321cde406ba0a0fc86a0 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,266 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=48d46786c5f7eb5ac7649da69fbcb6eee9869785e7c4321cde406ba0a0fc86a0 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,266 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=592e30dcbfb92fed77952f87ea29eedc1c274bee720ddc45753cb0fa0248c302 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,267 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=592e30dcbfb92fed77952f87ea29eedc1c274bee720ddc45753cb0fa0248c302 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,268 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=603747192ce4935baa4e2e61e4a782ff1b4c8abc06c626f747b2e7e7967db40b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,268 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=603747192ce4935baa4e2e61e4a782ff1b4c8abc06c626f747b2e7e7967db40b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,269 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=251ca335e86da7f14848971549e4135185a138b905d2f0a2b12ccfada4c223eb (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,269 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=251ca335e86da7f14848971549e4135185a138b905d2f0a2b12ccfada4c223eb (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,270 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp311-cp311-linux_armv6l.whl#sha256=af477e8f3ed70569d9339ce2a0fdaf76e481769fd782a619a90ff5b399bd9dd5 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,270 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp311-cp311-linux_armv7l.whl#sha256=af477e8f3ed70569d9339ce2a0fdaf76e481769fd782a619a90ff5b399bd9dd5 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,271 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=867c25b7ddbfa88fd33dd4be8fcf03023c17ce39e22e575964c8cd7d487079db (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,271 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=867c25b7ddbfa88fd33dd4be8fcf03023c17ce39e22e575964c8cd7d487079db (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,272 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=2a3f3ed4ebcce48cbba2166258a739c3dd0bc771bf3b3a7579547defd7189a1d (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,272 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=2a3f3ed4ebcce48cbba2166258a739c3dd0bc771bf3b3a7579547defd7189a1d (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,273 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp311-cp311-linux_armv6l.whl#sha256=1d661bff154759443c658339bccf44107b1979e672c429d9141d28401612ed5b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,274 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp311-cp311-linux_armv7l.whl#sha256=1d661bff154759443c658339bccf44107b1979e672c429d9141d28401612ed5b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,274 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=7caced6ceb6f513ba30f3126d102019987fc087a373f244b81244d9213b0836b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,275 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=7caced6ceb6f513ba30f3126d102019987fc087a373f244b81244d9213b0836b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,276 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=12fc57ba2957a89355a53d3557f272bcc629c2ca4448646189d6f440752e344c (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,276 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=12fc57ba2957a89355a53d3557f272bcc629c2ca4448646189d6f440752e344c (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T15:10:27,276 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp37-cp37m-linux_armv6l.whl#sha256=61c6429da2b23f979e962680ddb5d9179835d23777ad694daea64088d0953015 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,277 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=61c6429da2b23f979e962680ddb5d9179835d23777ad694daea64088d0953015 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,278 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp39-cp39-linux_armv6l.whl#sha256=da6183aeef1529c53251bd1049d177222c5203e40f9c55137254da0136e25c23 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,278 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp39-cp39-linux_armv7l.whl#sha256=da6183aeef1529c53251bd1049d177222c5203e40f9c55137254da0136e25c23 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,279 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=3c07f6d3b7d675b4c4e05195e958d8d30310a4087d0d9eac169df04a7a5bdcb4 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,279 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=3c07f6d3b7d675b4c4e05195e958d8d30310a4087d0d9eac169df04a7a5bdcb4 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,280 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=fc5cd995814ff9554ea570d11bd9ef53a5dcb22d910ab7fc97a8efca061f7b59 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,280 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=fc5cd995814ff9554ea570d11bd9ef53a5dcb22d910ab7fc97a8efca061f7b59 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,281 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp37-cp37m-linux_armv6l.whl#sha256=ff14e3da011d24125ed2957d107e760c25c513c9754454dc9c112dc6b22ddd32 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,281 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp37-cp37m-linux_armv7l.whl#sha256=ff14e3da011d24125ed2957d107e760c25c513c9754454dc9c112dc6b22ddd32 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,282 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp39-cp39-linux_armv6l.whl#sha256=3426c196c9709856b9deb9326f11a7cec3c73fb325280a241511468943fabac8 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,282 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp39-cp39-linux_armv7l.whl#sha256=3426c196c9709856b9deb9326f11a7cec3c73fb325280a241511468943fabac8 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,283 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fce46a4fb7ce4029ec332287307a3b5a746ca21d44a4ec78ab4fa0355db10a8d (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,284 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fce46a4fb7ce4029ec332287307a3b5a746ca21d44a4ec78ab4fa0355db10a8d (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,284 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=607a339c8a8202071af6d868d4b815da65da6c682aa227ffd33bb95c006405e5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,285 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=607a339c8a8202071af6d868d4b815da65da6c682aa227ffd33bb95c006405e5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,285 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp34-cp34m-linux_armv6l.whl#sha256=2a620e1e1c3fccbd63ef80dd67f74aea2a7d9530c274b17abdd78c3cf65d3c5b (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,286 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp34-cp34m-linux_armv7l.whl#sha256=2a620e1e1c3fccbd63ef80dd67f74aea2a7d9530c274b17abdd78c3cf65d3c5b (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,286 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp37-cp37m-linux_armv6l.whl#sha256=b776119773d312bf513a12920fcc483146ebfae22b1e30566ad6068f645c62ec (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,287 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp37-cp37m-linux_armv7l.whl#sha256=b776119773d312bf513a12920fcc483146ebfae22b1e30566ad6068f645c62ec (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,287 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp39-cp39-linux_armv6l.whl#sha256=86b9f6de74230683762b2a188aeaf805d5d31e5c75126938a9e48f0a7b054aa5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,288 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp39-cp39-linux_armv7l.whl#sha256=86b9f6de74230683762b2a188aeaf805d5d31e5c75126938a9e48f0a7b054aa5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,288 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp37-cp37m-linux_armv7l.whl#sha256=22f8b73b3c5e532e46a4078c73fa874d4d84920bfb968da50e1899a98ca4b82f (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,289 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp37-cp37m-linux_armv6l.whl#sha256=22f8b73b3c5e532e46a4078c73fa874d4d84920bfb968da50e1899a98ca4b82f (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,289 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp34-cp34m-linux_armv7l.whl#sha256=026feda118c1a7ebcc097d307e6f0d5c0eb8f9fdcb058753b45840b0ab092be0 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,290 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp34-cp34m-linux_armv6l.whl#sha256=026feda118c1a7ebcc097d307e6f0d5c0eb8f9fdcb058753b45840b0ab092be0 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,290 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp39-cp39-linux_armv6l.whl#sha256=466f52fb72edaf5930c8ab08ad4e20089507d847f5e39664db30038400664104 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,291 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp39-cp39-linux_armv7l.whl#sha256=466f52fb72edaf5930c8ab08ad4e20089507d847f5e39664db30038400664104 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,291 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp34-cp34m-linux_armv6l.whl#sha256=336fb3ed58bb369bd8e04d894703c4e2d28b2ce4dec9850c9ac6f91d53056bad (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,292 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp34-cp34m-linux_armv7l.whl#sha256=336fb3ed58bb369bd8e04d894703c4e2d28b2ce4dec9850c9ac6f91d53056bad (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,292 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp37-cp37m-linux_armv6l.whl#sha256=9ba0915a1b144a6ece4b4e63b9c83416cba293ea42efc2208e01cb0f5f757a99 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,293 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp37-cp37m-linux_armv7l.whl#sha256=9ba0915a1b144a6ece4b4e63b9c83416cba293ea42efc2208e01cb0f5f757a99 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,293 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp39-cp39-linux_armv6l.whl#sha256=967433ce1bea71bc1a0ccb6db1cf36dd4db91839d72462e75a34d2875e330eed (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,294 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp39-cp39-linux_armv7l.whl#sha256=967433ce1bea71bc1a0ccb6db1cf36dd4db91839d72462e75a34d2875e330eed (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,294 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp39-cp39-linux_armv6l.whl#sha256=b735b38c2db6d63cac4265995c6d35e367408da3aaf9617911864d564cbd7936 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,295 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp39-cp39-linux_armv7l.whl#sha256=b735b38c2db6d63cac4265995c6d35e367408da3aaf9617911864d564cbd7936 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,295 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp37-cp37m-linux_armv7l.whl#sha256=671edb168be5edfef4bc856b14eabffffa393ed08237e0f8c4000e382302bf4c (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,295 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp37-cp37m-linux_armv6l.whl#sha256=671edb168be5edfef4bc856b14eabffffa393ed08237e0f8c4000e382302bf4c (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,296 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=39b16e5db982ee6579aebd2a6292a29aa8f97e28b0c37bf9ab3553a207c83344 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,296 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=39b16e5db982ee6579aebd2a6292a29aa8f97e28b0c37bf9ab3553a207c83344 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,297 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp34-cp34m-linux_armv6l.whl#sha256=50f3a84bbaca0b761ec2017034a29956e966f7a6174b555dedbd223d1c5c0c04 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,298 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp34-cp34m-linux_armv7l.whl#sha256=50f3a84bbaca0b761ec2017034a29956e966f7a6174b555dedbd223d1c5c0c04 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,298 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=cf393f43e316c1323bd025065053612b3435ad250728f760ecb6abe91b2deca9 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,299 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=cf393f43e316c1323bd025065053612b3435ad250728f760ecb6abe91b2deca9 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T15:10:27,299 Skipping link: not a file: https://www.piwheels.org/simple/dadi/ 2024-07-04T15:10:27,300 Skipping link: not a file: https://pypi.org/simple/dadi/ 2024-07-04T15:10:27,322 Given no hashes to check 1 links for project 'dadi': discarding no candidates 2024-07-04T15:10:27,342 Collecting dadi==2.3.5 2024-07-04T15:10:27,344 Created temporary directory: /tmp/pip-unpack-b_kk9_w_ 2024-07-04T15:10:27,558 Downloading dadi-2.3.5.tar.gz (3.7 MB) 2024-07-04T15:10:29,848 Added dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-pur9_2xz' 2024-07-04T15:10:29,858 Created temporary directory: /tmp/pip-build-env-ib4mlwu_ 2024-07-04T15:10:29,863 Installing build dependencies: started 2024-07-04T15:10:29,864 Running command pip subprocess to install build dependencies 2024-07-04T15:10:31,036 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-07-04T15:10:31,577 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-04T15:10:32,067 Collecting wheel 2024-07-04T15:10:32,082 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-07-04T15:10:32,723 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2024-07-04T15:10:32,727 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2024-07-04T15:10:32,730 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2024-07-04T15:10:32,734 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2024-07-04T15:10:32,737 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2024-07-04T15:10:33,026 Collecting numpy 2024-07-04T15:10:33,063 Using cached https://www.piwheels.org/simple/numpy/numpy-2.0.0-cp311-cp311-linux_armv7l.whl (5.9 MB) 2024-07-04T15:10:34,464 Collecting Cython 2024-07-04T15:10:34,478 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp311-cp311-linux_armv7l.whl (11.8 MB) 2024-07-04T15:10:34,865 Collecting bdist_mpkg 2024-07-04T15:10:34,877 Downloading https://www.piwheels.org/simple/bdist-mpkg/bdist_mpkg-0.5.0-py3-none-any.whl (20 kB) 2024-07-04T15:10:35,159 Collecting setuptools-scm 2024-07-04T15:10:35,184 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-04T15:10:35,463 Collecting packaging>=20 (from setuptools-scm) 2024-07-04T15:10:35,478 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-04T15:10:36,651 Collecting setuptools (from setuptools-scm) 2024-07-04T15:10:36,665 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.2.0-py3-none-any.whl (930 kB) 2024-07-04T15:10:39,459 Installing collected packages: bdist_mpkg, wheel, setuptools, packaging, numpy, Cython, setuptools-scm 2024-07-04T15:10:39,558 Creating /tmp/pip-build-env-ib4mlwu_/overlay/local/bin 2024-07-04T15:10:39,560 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/bdist_mpkg to 755 2024-07-04T15:10:39,563 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/reown_mpkg to 755 2024-07-04T15:10:39,793 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/wheel to 755 2024-07-04T15:10:50,898 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/f2py to 755 2024-07-04T15:10:50,900 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/numpy-config to 755 2024-07-04T15:10:54,524 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/cygdb to 755 2024-07-04T15:10:54,525 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/cython to 755 2024-07-04T15:10:54,527 changing mode of /tmp/pip-build-env-ib4mlwu_/overlay/local/bin/cythonize to 755 2024-07-04T15:10:54,788 Successfully installed Cython-3.0.10 bdist_mpkg-0.5.0 numpy-2.0.0 packaging-24.1 setuptools-70.2.0 setuptools-scm-8.1.0 wheel-0.43.0 2024-07-04T15:10:55,142 [notice] A new release of pip is available: 24.0 -> 24.1.1 2024-07-04T15:10:55,142 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-04T15:10:55,619 Installing build dependencies: finished with status 'done' 2024-07-04T15:10:55,622 Getting requirements to build wheel: started 2024-07-04T15:10:55,623 Running command Getting requirements to build wheel 2024-07-04T15:10:58,610 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/DFE/PDFs_cython.pyx 2024-07-04T15:10:58,611 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:10:59,400 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/Triallele/transition1.pyx 2024-07-04T15:10:59,400 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:00,287 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/Triallele/transition12.pyx 2024-07-04T15:11:00,288 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:00,990 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/Triallele/transition1D.pyx 2024-07-04T15:11:00,991 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:01,789 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/Triallele/transition2.pyx 2024-07-04T15:11:01,789 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:02,719 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/projection_genotypes.pyx 2024-07-04T15:11:02,720 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:03,343 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/surface_interaction.pyx 2024-07-04T15:11:03,343 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:04,215 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition1.pyx 2024-07-04T15:11:04,215 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:05,087 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition12.pyx 2024-07-04T15:11:05,088 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:06,027 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition13.pyx 2024-07-04T15:11:06,028 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:06,745 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition1D.pyx 2024-07-04T15:11:06,746 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:07,626 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition2.pyx 2024-07-04T15:11:07,627 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:08,671 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition23.pyx 2024-07-04T15:11:08,672 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:09,388 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/TwoLocus/transition3.pyx 2024-07-04T15:11:09,389 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:10,487 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/integration_c.pyx 2024-07-04T15:11:10,488 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:11,655 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1/dadi/tridiag_cython.pyx 2024-07-04T15:11:11,656 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T15:11:12,208 Compiling dadi/tridiag_cython.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,208 Compiling dadi/integration_c.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,209 Compiling dadi/DFE/PDFs_cython.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,210 Compiling dadi/Triallele/transition1.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,210 Compiling dadi/Triallele/transition2.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,210 Compiling dadi/Triallele/transition12.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,211 Compiling dadi/Triallele/transition1D.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,211 Compiling dadi/TwoLocus/projection_genotypes.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,212 Compiling dadi/TwoLocus/surface_interaction.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,212 Compiling dadi/TwoLocus/transition1.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,213 Compiling dadi/TwoLocus/transition2.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,213 Compiling dadi/TwoLocus/transition3.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,214 Compiling dadi/TwoLocus/transition12.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,214 Compiling dadi/TwoLocus/transition13.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,215 Compiling dadi/TwoLocus/transition23.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,216 Compiling dadi/TwoLocus/transition1D.pyx because it depends on /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2024-07-04T15:11:12,216 [ 1/16] Cythonizing dadi/DFE/PDFs_cython.pyx 2024-07-04T15:11:12,217 [ 2/16] Cythonizing dadi/Triallele/transition1.pyx 2024-07-04T15:11:12,217 [ 3/16] Cythonizing dadi/Triallele/transition12.pyx 2024-07-04T15:11:12,217 [ 4/16] Cythonizing dadi/Triallele/transition1D.pyx 2024-07-04T15:11:12,218 [ 5/16] Cythonizing dadi/Triallele/transition2.pyx 2024-07-04T15:11:12,219 [ 6/16] Cythonizing dadi/TwoLocus/projection_genotypes.pyx 2024-07-04T15:11:12,219 [ 7/16] Cythonizing dadi/TwoLocus/surface_interaction.pyx 2024-07-04T15:11:12,220 [ 8/16] Cythonizing dadi/TwoLocus/transition1.pyx 2024-07-04T15:11:12,220 [ 9/16] Cythonizing dadi/TwoLocus/transition12.pyx 2024-07-04T15:11:12,220 [10/16] Cythonizing dadi/TwoLocus/transition13.pyx 2024-07-04T15:11:12,221 [11/16] Cythonizing dadi/TwoLocus/transition1D.pyx 2024-07-04T15:11:12,222 [12/16] Cythonizing dadi/TwoLocus/transition2.pyx 2024-07-04T15:11:12,222 [13/16] Cythonizing dadi/TwoLocus/transition23.pyx 2024-07-04T15:11:12,222 [14/16] Cythonizing dadi/TwoLocus/transition3.pyx 2024-07-04T15:11:12,223 [15/16] Cythonizing dadi/integration_c.pyx 2024-07-04T15:11:12,223 [16/16] Cythonizing dadi/tridiag_cython.pyx 2024-07-04T15:11:12,601 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.11/plistlib.py) 2024-07-04T15:11:12,669 running egg_info 2024-07-04T15:11:12,676 writing dadi.egg-info/PKG-INFO 2024-07-04T15:11:12,679 writing dependency_links to dadi.egg-info/dependency_links.txt 2024-07-04T15:11:12,681 writing requirements to dadi.egg-info/requires.txt 2024-07-04T15:11:12,682 writing top-level names to dadi.egg-info/top_level.txt 2024-07-04T15:11:12,749 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T15:11:12,754 reading manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:12,831 reading manifest template 'MANIFEST.in' 2024-07-04T15:11:12,916 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T15:11:12,948 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T15:11:12,979 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T15:11:13,144 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T15:11:13,148 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T15:11:13,153 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T15:11:13,156 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T15:11:13,161 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T15:11:13,165 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T15:11:13,170 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T15:11:13,174 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T15:11:13,179 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T15:11:13,180 adding license file 'LICENSE.txt' 2024-07-04T15:11:13,211 writing manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:14,340 Getting requirements to build wheel: finished with status 'done' 2024-07-04T15:11:14,344 Created temporary directory: /tmp/pip-modern-metadata-pqc6zxrl 2024-07-04T15:11:14,346 Preparing metadata (pyproject.toml): started 2024-07-04T15:11:14,347 Running command Preparing metadata (pyproject.toml) 2024-07-04T15:11:16,163 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.11/plistlib.py) 2024-07-04T15:11:16,221 running dist_info 2024-07-04T15:11:16,229 creating /tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info 2024-07-04T15:11:16,235 writing /tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/PKG-INFO 2024-07-04T15:11:16,239 writing dependency_links to /tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/dependency_links.txt 2024-07-04T15:11:16,240 writing requirements to /tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/requires.txt 2024-07-04T15:11:16,242 writing top-level names to /tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/top_level.txt 2024-07-04T15:11:16,243 writing manifest file '/tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:16,300 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T15:11:16,303 reading manifest file '/tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:16,305 reading manifest template 'MANIFEST.in' 2024-07-04T15:11:16,382 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T15:11:16,412 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T15:11:16,442 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T15:11:16,585 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T15:11:16,587 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T15:11:16,588 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T15:11:16,590 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T15:11:16,592 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T15:11:16,593 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T15:11:16,595 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T15:11:16,597 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T15:11:16,599 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T15:11:16,599 adding license file 'LICENSE.txt' 2024-07-04T15:11:16,616 writing manifest file '/tmp/pip-modern-metadata-pqc6zxrl/dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:16,618 creating '/tmp/pip-modern-metadata-pqc6zxrl/dadi-2.3.5.dist-info' 2024-07-04T15:11:16,843 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-04T15:11:16,847 Source in /tmp/pip-wheel-o1hl993l/dadi_43daa7db075045e89631e87afa502be1 has version 2.3.5, which satisfies requirement dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz 2024-07-04T15:11:16,848 Removed dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-pur9_2xz' 2024-07-04T15:11:16,854 Created temporary directory: /tmp/pip-unpack-fbb4apn4 2024-07-04T15:11:16,855 Created temporary directory: /tmp/pip-unpack-52xgq630 2024-07-04T15:11:16,861 Building wheels for collected packages: dadi 2024-07-04T15:11:16,865 Created temporary directory: /tmp/pip-wheel-ipwv9gks 2024-07-04T15:11:16,866 Destination directory: /tmp/pip-wheel-ipwv9gks 2024-07-04T15:11:16,868 Building wheel for dadi (pyproject.toml): started 2024-07-04T15:11:16,869 Running command Building wheel for dadi (pyproject.toml) 2024-07-04T15:11:18,581 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.11/plistlib.py) 2024-07-04T15:11:18,631 running bdist_wheel 2024-07-04T15:11:18,660 running build 2024-07-04T15:11:18,661 running build_py 2024-07-04T15:11:18,668 creating build 2024-07-04T15:11:18,668 creating build/lib.linux-armv7l-cpython-311 2024-07-04T15:11:18,669 creating build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,670 copying dadi/PhiManip.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,675 copying dadi/Integration.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,678 copying dadi/Godambe.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,680 copying dadi/Numerics.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,683 copying dadi/Spectrum_mod.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,687 copying dadi/NLopt_mod.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,689 copying dadi/Inference.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,693 copying dadi/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,694 copying dadi/Demographics1D.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,696 copying dadi/Plotting.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,699 copying dadi/Misc.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,702 copying dadi/Demographics2D.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,704 copying dadi/Demographics3D.py -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:18,707 creating build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,708 copying dadi/DFE/Cache2D_mod.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,710 copying dadi/DFE/DemogSelModels.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,712 copying dadi/DFE/PDFs.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,714 copying dadi/DFE/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,716 copying dadi/DFE/Plotting.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,718 copying dadi/DFE/Cache1D_mod.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,720 copying dadi/DFE/Vourlaki2022.py -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:18,723 creating build/lib.linux-armv7l-cpython-311/dadi/Demes 2024-07-04T15:11:18,724 copying dadi/Demes/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi/Demes 2024-07-04T15:11:18,726 copying dadi/Demes/Demes.py -> build/lib.linux-armv7l-cpython-311/dadi/Demes 2024-07-04T15:11:18,729 creating build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,730 copying dadi/TwoLocus/numerics.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,733 copying dadi/TwoLocus/inference.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,736 copying dadi/TwoLocus/integration.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,738 copying dadi/TwoLocus/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,739 copying dadi/TwoLocus/TLSpectrum_mod.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,742 copying dadi/TwoLocus/plotting.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,744 copying dadi/TwoLocus/demographics.py -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:18,747 creating build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,748 copying dadi/Triallele/numerics.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,751 copying dadi/Triallele/integration.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,754 copying dadi/Triallele/TriSpectrum_mod.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,756 copying dadi/Triallele/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,758 copying dadi/Triallele/plotting.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,760 copying dadi/Triallele/demographics.py -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:18,763 creating build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:18,764 copying dadi/cuda/Integration.py -> build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:18,768 copying dadi/cuda/cusparse.py -> build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:18,770 copying dadi/cuda/__init__.py -> build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:18,772 copying dadi/cuda/kernels.py -> build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:18,774 creating build/lib.linux-armv7l-cpython-311/dadi/PortikModels 2024-07-04T15:11:18,775 copying dadi/PortikModels/portik_models_3d.py -> build/lib.linux-armv7l-cpython-311/dadi/PortikModels 2024-07-04T15:11:18,778 copying dadi/PortikModels/portik_models_2d.py -> build/lib.linux-armv7l-cpython-311/dadi/PortikModels 2024-07-04T15:11:18,781 running egg_info 2024-07-04T15:11:18,788 writing dadi.egg-info/PKG-INFO 2024-07-04T15:11:18,791 writing dependency_links to dadi.egg-info/dependency_links.txt 2024-07-04T15:11:18,792 writing requirements to dadi.egg-info/requires.txt 2024-07-04T15:11:18,794 writing top-level names to dadi.egg-info/top_level.txt 2024-07-04T15:11:18,833 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T15:11:18,836 reading manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:18,850 reading manifest template 'MANIFEST.in' 2024-07-04T15:11:18,929 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T15:11:18,961 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T15:11:18,992 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T15:11:19,140 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T15:11:19,143 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T15:11:19,146 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T15:11:19,148 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T15:11:19,151 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T15:11:19,155 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T15:11:19,158 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T15:11:19,161 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T15:11:19,164 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T15:11:19,164 adding license file 'LICENSE.txt' 2024-07-04T15:11:19,189 writing manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T15:11:19,214 copying dadi/integration1D.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,216 copying dadi/integration2D.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,219 copying dadi/integration3D.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,221 copying dadi/integration4D.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,224 copying dadi/integration5D.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,227 copying dadi/integration_c.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,243 copying dadi/integration_c.pyx -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,246 copying dadi/integration_cython.h -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,248 copying dadi/integration_shared.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,250 copying dadi/integration_shared.h -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,252 copying dadi/tridiag.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,254 copying dadi/tridiag.h -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,256 copying dadi/tridiag_cython.c -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,264 copying dadi/tridiag_cython.pyx -> build/lib.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,266 copying dadi/DFE/LICENSE -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:19,268 copying dadi/DFE/PDFs.c -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:19,270 copying dadi/DFE/PDFs.pyf -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:19,273 copying dadi/DFE/PDFs_cython.c -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:19,284 copying dadi/DFE/PDFs_cython.pyx -> build/lib.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:19,286 copying dadi/TwoLocus/projection_genotypes.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,295 copying dadi/TwoLocus/projection_genotypes.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,298 copying dadi/TwoLocus/surface_interaction.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,307 copying dadi/TwoLocus/surface_interaction.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,309 copying dadi/TwoLocus/transition1.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,326 copying dadi/TwoLocus/transition1.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,329 copying dadi/TwoLocus/transition12.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,343 copying dadi/TwoLocus/transition12.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,345 copying dadi/TwoLocus/transition13.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,359 copying dadi/TwoLocus/transition13.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,361 copying dadi/TwoLocus/transition1D.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,374 copying dadi/TwoLocus/transition1D.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,376 copying dadi/TwoLocus/transition2.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,388 copying dadi/TwoLocus/transition2.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,390 copying dadi/TwoLocus/transition23.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,400 copying dadi/TwoLocus/transition23.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,402 copying dadi/TwoLocus/transition3.c -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,415 copying dadi/TwoLocus/transition3.pyx -> build/lib.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:11:19,417 copying dadi/Triallele/transition1.c -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,428 copying dadi/Triallele/transition1.pyx -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,431 copying dadi/Triallele/transition12.c -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,443 copying dadi/Triallele/transition12.pyx -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,445 copying dadi/Triallele/transition1D.c -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,459 copying dadi/Triallele/transition1D.pyx -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,461 copying dadi/Triallele/transition2.c -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,477 copying dadi/Triallele/transition2.pyx -> build/lib.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:19,479 copying dadi/cuda/kernels.cu -> build/lib.linux-armv7l-cpython-311/dadi/cuda 2024-07-04T15:11:19,482 copying dadi/PortikModels/LICENSE -> build/lib.linux-armv7l-cpython-311/dadi/PortikModels 2024-07-04T15:11:19,488 running build_ext 2024-07-04T15:11:19,494 building 'dadi.tridiag_cython' extension 2024-07-04T15:11:19,496 creating build/temp.linux-armv7l-cpython-311 2024-07-04T15:11:19,496 creating build/temp.linux-armv7l-cpython-311/dadi 2024-07-04T15:11:19,498 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/tridiag.c -o build/temp.linux-armv7l-cpython-311/dadi/tridiag.o 2024-07-04T15:11:19,717 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/tridiag_cython.c -o build/temp.linux-armv7l-cpython-311/dadi/tridiag_cython.o 2024-07-04T15:11:20,128 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:11:20,129 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:11:20,129 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:11:20,130 from dadi/tridiag_cython.c:1246: 2024-07-04T15:11:20,130 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:11:20,131 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:11:20,131 | ^~~~~~~ 2024-07-04T15:11:23,596 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/tridiag.o build/temp.linux-armv7l-cpython-311/dadi/tridiag_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/tridiag_cython.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:11:23,706 building 'dadi.integration_c' extension 2024-07-04T15:11:23,707 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration1D.c -o build/temp.linux-armv7l-cpython-311/dadi/integration1D.o 2024-07-04T15:11:23,920 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration2D.c -o build/temp.linux-armv7l-cpython-311/dadi/integration2D.o 2024-07-04T15:11:24,416 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration3D.c -o build/temp.linux-armv7l-cpython-311/dadi/integration3D.o 2024-07-04T15:11:25,279 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration4D.c -o build/temp.linux-armv7l-cpython-311/dadi/integration4D.o 2024-07-04T15:11:26,194 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration5D.c -o build/temp.linux-armv7l-cpython-311/dadi/integration5D.o 2024-07-04T15:11:27,503 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration_c.c -o build/temp.linux-armv7l-cpython-311/dadi/integration_c.o 2024-07-04T15:11:27,904 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:11:27,905 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:11:27,905 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:11:27,906 from dadi/integration_c.c:1252: 2024-07-04T15:11:27,907 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:11:27,907 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:11:27,908 | ^~~~~~~ 2024-07-04T15:11:47,303 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/integration_shared.c -o build/temp.linux-armv7l-cpython-311/dadi/integration_shared.o 2024-07-04T15:11:47,628 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/tridiag.c -o build/temp.linux-armv7l-cpython-311/dadi/tridiag.o 2024-07-04T15:11:47,840 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/integration1D.o build/temp.linux-armv7l-cpython-311/dadi/integration2D.o build/temp.linux-armv7l-cpython-311/dadi/integration3D.o build/temp.linux-armv7l-cpython-311/dadi/integration4D.o build/temp.linux-armv7l-cpython-311/dadi/integration5D.o build/temp.linux-armv7l-cpython-311/dadi/integration_c.o build/temp.linux-armv7l-cpython-311/dadi/integration_shared.o build/temp.linux-armv7l-cpython-311/dadi/tridiag.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/integration_c.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:11:48,010 building 'dadi.DFE.PDFs_cython' extension 2024-07-04T15:11:48,011 creating build/temp.linux-armv7l-cpython-311/dadi/DFE 2024-07-04T15:11:48,011 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi/DFE -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/DFE/PDFs_cython.c -o build/temp.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.o 2024-07-04T15:11:48,411 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:11:48,411 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:11:48,412 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:11:48,413 from dadi/DFE/PDFs_cython.c:1245: 2024-07-04T15:11:48,413 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:11:48,414 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:11:48,414 | ^~~~~~~ 2024-07-04T15:11:48,437 In file included from dadi/DFE/PDFs_cython.c:1250: 2024-07-04T15:11:48,438 dadi/DFE/PDFs.c:4: warning: "M_PI" redefined 2024-07-04T15:11:48,439 4 | #define M_PI 3.14159265358979323846264338327950288 2024-07-04T15:11:48,439 | 2024-07-04T15:11:48,440 In file included from /usr/include/python3.11/pyport.h:218, 2024-07-04T15:11:48,441 from /usr/include/python3.11/Python.h:38, 2024-07-04T15:11:48,442 from dadi/DFE/PDFs_cython.c:34: 2024-07-04T15:11:48,442 /usr/include/math.h:1151: note: this is the location of the previous definition 2024-07-04T15:11:48,443 1151 | # define M_PI 3.14159265358979323846 /* pi */ 2024-07-04T15:11:48,443 | 2024-07-04T15:11:53,276 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:11:53,381 building 'dadi.Triallele.transition1' extension 2024-07-04T15:11:53,381 creating build/temp.linux-armv7l-cpython-311/dadi/Triallele 2024-07-04T15:11:53,382 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/Triallele/transition1.c -o build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition1.o 2024-07-04T15:11:53,783 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:11:53,784 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:11:53,784 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:11:53,785 from dadi/Triallele/transition1.c:1240: 2024-07-04T15:11:53,785 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:11:53,786 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:11:53,787 | ^~~~~~~ 2024-07-04T15:12:06,825 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:06,940 building 'dadi.Triallele.transition2' extension 2024-07-04T15:12:06,941 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/Triallele/transition2.c -o build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition2.o 2024-07-04T15:12:07,349 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:07,350 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:07,350 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:07,351 from dadi/Triallele/transition2.c:1240: 2024-07-04T15:12:07,352 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:07,352 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:07,353 | ^~~~~~~ 2024-07-04T15:12:20,382 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition2.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition2.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:20,502 building 'dadi.Triallele.transition12' extension 2024-07-04T15:12:20,502 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/Triallele/transition12.c -o build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition12.o 2024-07-04T15:12:20,903 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:20,904 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:20,904 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:20,905 from dadi/Triallele/transition12.c:1240: 2024-07-04T15:12:20,905 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:20,906 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:20,906 | ^~~~~~~ 2024-07-04T15:12:28,399 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition12.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition12.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:28,512 building 'dadi.Triallele.transition1D' extension 2024-07-04T15:12:28,513 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/Triallele/transition1D.c -o build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition1D.o 2024-07-04T15:12:28,914 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:28,915 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:28,915 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:28,916 from dadi/Triallele/transition1D.c:1240: 2024-07-04T15:12:28,917 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:28,917 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:28,918 | ^~~~~~~ 2024-07-04T15:12:34,605 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/Triallele/transition1D.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1D.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:34,713 building 'dadi.TwoLocus.projection_genotypes' extension 2024-07-04T15:12:34,713 creating build/temp.linux-armv7l-cpython-311/dadi/TwoLocus 2024-07-04T15:12:34,715 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/projection_genotypes.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.o 2024-07-04T15:12:35,111 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:35,112 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:35,113 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:35,113 from dadi/TwoLocus/projection_genotypes.c:1240: 2024-07-04T15:12:35,114 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:35,114 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:35,115 | ^~~~~~~ 2024-07-04T15:12:43,190 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:43,297 building 'dadi.TwoLocus.surface_interaction' extension 2024-07-04T15:12:43,298 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/surface_interaction.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.o 2024-07-04T15:12:43,722 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:43,722 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:43,723 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:43,724 from dadi/TwoLocus/surface_interaction.c:1240: 2024-07-04T15:12:43,724 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:43,725 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:43,726 | ^~~~~~~ 2024-07-04T15:12:51,869 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:12:51,974 building 'dadi.TwoLocus.transition1' extension 2024-07-04T15:12:51,975 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition1.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.o 2024-07-04T15:12:52,371 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:12:52,371 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:12:52,372 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:12:52,373 from dadi/TwoLocus/transition1.c:1240: 2024-07-04T15:12:52,373 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:12:52,374 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:12:52,374 | ^~~~~~~ 2024-07-04T15:13:06,036 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:13:06,148 building 'dadi.TwoLocus.transition2' extension 2024-07-04T15:13:06,149 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition2.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.o 2024-07-04T15:13:06,547 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:13:06,548 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:13:06,548 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:13:06,549 from dadi/TwoLocus/transition2.c:1240: 2024-07-04T15:13:06,549 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:13:06,550 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:13:06,551 | ^~~~~~~ 2024-07-04T15:13:20,268 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:13:20,383 building 'dadi.TwoLocus.transition3' extension 2024-07-04T15:13:20,384 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition3.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.o 2024-07-04T15:13:20,782 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:13:20,783 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:13:20,783 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:13:20,784 from dadi/TwoLocus/transition3.c:1240: 2024-07-04T15:13:20,784 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:13:20,785 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:13:20,786 | ^~~~~~~ 2024-07-04T15:13:34,578 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:13:34,692 building 'dadi.TwoLocus.transition12' extension 2024-07-04T15:13:34,693 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition12.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.o 2024-07-04T15:13:35,090 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:13:35,090 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:13:35,091 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:13:35,091 from dadi/TwoLocus/transition12.c:1240: 2024-07-04T15:13:35,092 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:13:35,093 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:13:35,093 | ^~~~~~~ 2024-07-04T15:13:43,141 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:13:43,248 building 'dadi.TwoLocus.transition13' extension 2024-07-04T15:13:43,249 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition13.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.o 2024-07-04T15:13:43,644 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:13:43,645 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:13:43,646 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:13:43,646 from dadi/TwoLocus/transition13.c:1240: 2024-07-04T15:13:43,647 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:13:43,647 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:13:43,648 | ^~~~~~~ 2024-07-04T15:13:51,638 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:13:51,749 building 'dadi.TwoLocus.transition23' extension 2024-07-04T15:13:51,750 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition23.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.o 2024-07-04T15:13:52,147 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:13:52,148 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:13:52,148 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:13:52,149 from dadi/TwoLocus/transition23.c:1240: 2024-07-04T15:13:52,149 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:13:52,150 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:13:52,150 | ^~~~~~~ 2024-07-04T15:14:00,236 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:14:00,347 building 'dadi.TwoLocus.transition1D' extension 2024-07-04T15:14:00,347 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c dadi/TwoLocus/transition1D.c -o build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.o 2024-07-04T15:14:00,745 In file included from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T15:14:00,746 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T15:14:00,746 from /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T15:14:00,747 from dadi/TwoLocus/transition1D.c:1240: 2024-07-04T15:14:00,748 /tmp/pip-build-env-ib4mlwu_/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T15:14:00,748 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T15:14:00,749 | ^~~~~~~ 2024-07-04T15:14:07,238 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.cpython-311-arm-linux-gnueabihf.so 2024-07-04T15:14:07,357 installing to build/bdist.linux-armv7l/wheel 2024-07-04T15:14:07,358 running install 2024-07-04T15:14:07,382 running install_lib 2024-07-04T15:14:07,389 creating build/bdist.linux-armv7l 2024-07-04T15:14:07,390 creating build/bdist.linux-armv7l/wheel 2024-07-04T15:14:07,392 creating build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,394 copying build/lib.linux-armv7l-cpython-311/dadi/PhiManip.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,397 copying build/lib.linux-armv7l-cpython-311/dadi/Integration.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,400 copying build/lib.linux-armv7l-cpython-311/dadi/Godambe.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,404 creating build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,405 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.pyx -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,407 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/Cache2D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,410 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/DemogSelModels.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,413 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.c -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,425 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,427 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs.c -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,429 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,431 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,434 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/Cache1D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,436 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/LICENSE -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,438 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/Vourlaki2022.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,441 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs.pyf -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,443 copying build/lib.linux-armv7l-cpython-311/dadi/DFE/PDFs_cython.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T15:14:07,451 copying build/lib.linux-armv7l-cpython-311/dadi/integration3D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,454 copying build/lib.linux-armv7l-cpython-311/dadi/integration1D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,456 creating build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T15:14:07,457 copying build/lib.linux-armv7l-cpython-311/dadi/Demes/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T15:14:07,459 copying build/lib.linux-armv7l-cpython-311/dadi/Demes/Demes.py -> build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T15:14:07,462 copying build/lib.linux-armv7l-cpython-311/dadi/integration5D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,465 copying build/lib.linux-armv7l-cpython-311/dadi/Numerics.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,468 copying build/lib.linux-armv7l-cpython-311/dadi/Spectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,473 copying build/lib.linux-armv7l-cpython-311/dadi/NLopt_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,476 copying build/lib.linux-armv7l-cpython-311/dadi/tridiag.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,478 copying build/lib.linux-armv7l-cpython-311/dadi/tridiag_cython.pyx -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,480 copying build/lib.linux-armv7l-cpython-311/dadi/Inference.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,484 copying build/lib.linux-armv7l-cpython-311/dadi/tridiag.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,486 copying build/lib.linux-armv7l-cpython-311/dadi/__init__.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,489 copying build/lib.linux-armv7l-cpython-311/dadi/Demographics1D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,491 copying build/lib.linux-armv7l-cpython-311/dadi/integration2D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,494 copying build/lib.linux-armv7l-cpython-311/dadi/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,497 copying build/lib.linux-armv7l-cpython-311/dadi/Misc.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,500 copying build/lib.linux-armv7l-cpython-311/dadi/integration_cython.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,503 copying build/lib.linux-armv7l-cpython-311/dadi/Demographics2D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,506 creating build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,507 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,520 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,530 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,535 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,547 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,556 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,566 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,568 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,582 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/inference.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,585 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/integration.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,587 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,601 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,610 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,612 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition2.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,615 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,617 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,619 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,637 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,639 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,648 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,661 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition23.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,664 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/TLSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,667 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,669 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,686 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition13.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,700 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition12.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,710 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,713 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,716 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,724 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,726 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition3.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,735 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/projection_genotypes.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,746 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/surface_interaction.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,748 copying build/lib.linux-armv7l-cpython-311/dadi/TwoLocus/transition1D.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T15:14:07,754 copying build/lib.linux-armv7l-cpython-311/dadi/tridiag_cython.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,760 copying build/lib.linux-armv7l-cpython-311/dadi/Demographics3D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,763 copying build/lib.linux-armv7l-cpython-311/dadi/tridiag_cython.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,774 creating build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,775 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1D.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,787 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,790 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,800 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition12.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,811 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition12.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,813 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/integration.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,815 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/TriSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,818 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition2.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,830 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition2.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,839 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,841 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition2.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,843 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1D.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,845 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,861 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition12.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,868 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,870 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,872 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,874 copying build/lib.linux-armv7l-cpython-311/dadi/Triallele/transition1D.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T15:14:07,880 copying build/lib.linux-armv7l-cpython-311/dadi/integration_c.pyx -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,883 copying build/lib.linux-armv7l-cpython-311/dadi/integration_shared.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,884 copying build/lib.linux-armv7l-cpython-311/dadi/integration_c.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,899 creating build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,900 copying build/lib.linux-armv7l-cpython-311/dadi/cuda/Integration.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,903 copying build/lib.linux-armv7l-cpython-311/dadi/cuda/cusparse.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,905 copying build/lib.linux-armv7l-cpython-311/dadi/cuda/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,907 copying build/lib.linux-armv7l-cpython-311/dadi/cuda/kernels.cu -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,910 copying build/lib.linux-armv7l-cpython-311/dadi/cuda/kernels.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T15:14:07,912 copying build/lib.linux-armv7l-cpython-311/dadi/integration4D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,915 creating build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T15:14:07,916 copying build/lib.linux-armv7l-cpython-311/dadi/PortikModels/portik_models_3d.py -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T15:14:07,920 copying build/lib.linux-armv7l-cpython-311/dadi/PortikModels/LICENSE -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T15:14:07,923 copying build/lib.linux-armv7l-cpython-311/dadi/PortikModels/portik_models_2d.py -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T15:14:07,927 copying build/lib.linux-armv7l-cpython-311/dadi/integration_shared.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,929 copying build/lib.linux-armv7l-cpython-311/dadi/integration_c.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T15:14:07,947 running install_egg_info 2024-07-04T15:14:07,959 Copying dadi.egg-info to build/bdist.linux-armv7l/wheel/dadi-2.3.5-py3.11.egg-info 2024-07-04T15:14:07,972 running install_scripts 2024-07-04T15:14:08,029 creating build/bdist.linux-armv7l/wheel/dadi-2.3.5.dist-info/WHEEL 2024-07-04T15:14:08,031 creating '/tmp/pip-wheel-ipwv9gks/.tmp-1hykti2q/dadi-2.3.5-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-04T15:14:08,035 adding 'dadi/Demographics1D.py' 2024-07-04T15:14:08,036 adding 'dadi/Demographics2D.py' 2024-07-04T15:14:08,038 adding 'dadi/Demographics3D.py' 2024-07-04T15:14:08,041 adding 'dadi/Godambe.py' 2024-07-04T15:14:08,046 adding 'dadi/Inference.py' 2024-07-04T15:14:08,051 adding 'dadi/Integration.py' 2024-07-04T15:14:08,056 adding 'dadi/Misc.py' 2024-07-04T15:14:08,058 adding 'dadi/NLopt_mod.py' 2024-07-04T15:14:08,062 adding 'dadi/Numerics.py' 2024-07-04T15:14:08,065 adding 'dadi/PhiManip.py' 2024-07-04T15:14:08,069 adding 'dadi/Plotting.py' 2024-07-04T15:14:08,081 adding 'dadi/Spectrum_mod.py' 2024-07-04T15:14:08,083 adding 'dadi/__init__.py' 2024-07-04T15:14:08,084 adding 'dadi/integration1D.c' 2024-07-04T15:14:08,086 adding 'dadi/integration2D.c' 2024-07-04T15:14:08,087 adding 'dadi/integration3D.c' 2024-07-04T15:14:08,089 adding 'dadi/integration4D.c' 2024-07-04T15:14:08,091 adding 'dadi/integration5D.c' 2024-07-04T15:14:08,136 adding 'dadi/integration_c.c' 2024-07-04T15:14:08,270 adding 'dadi/integration_c.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,277 adding 'dadi/integration_c.pyx' 2024-07-04T15:14:08,278 adding 'dadi/integration_cython.h' 2024-07-04T15:14:08,279 adding 'dadi/integration_shared.c' 2024-07-04T15:14:08,280 adding 'dadi/integration_shared.h' 2024-07-04T15:14:08,282 adding 'dadi/tridiag.c' 2024-07-04T15:14:08,283 adding 'dadi/tridiag.h' 2024-07-04T15:14:08,314 adding 'dadi/tridiag_cython.c' 2024-07-04T15:14:08,356 adding 'dadi/tridiag_cython.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,358 adding 'dadi/tridiag_cython.pyx' 2024-07-04T15:14:08,360 adding 'dadi/DFE/Cache1D_mod.py' 2024-07-04T15:14:08,363 adding 'dadi/DFE/Cache2D_mod.py' 2024-07-04T15:14:08,365 adding 'dadi/DFE/DemogSelModels.py' 2024-07-04T15:14:08,367 adding 'dadi/DFE/LICENSE' 2024-07-04T15:14:08,368 adding 'dadi/DFE/PDFs.c' 2024-07-04T15:14:08,370 adding 'dadi/DFE/PDFs.py' 2024-07-04T15:14:08,371 adding 'dadi/DFE/PDFs.pyf' 2024-07-04T15:14:08,406 adding 'dadi/DFE/PDFs_cython.c' 2024-07-04T15:14:08,462 adding 'dadi/DFE/PDFs_cython.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,464 adding 'dadi/DFE/PDFs_cython.pyx' 2024-07-04T15:14:08,466 adding 'dadi/DFE/Plotting.py' 2024-07-04T15:14:08,468 adding 'dadi/DFE/Vourlaki2022.py' 2024-07-04T15:14:08,469 adding 'dadi/DFE/__init__.py' 2024-07-04T15:14:08,473 adding 'dadi/Demes/Demes.py' 2024-07-04T15:14:08,474 adding 'dadi/Demes/__init__.py' 2024-07-04T15:14:08,476 adding 'dadi/PortikModels/LICENSE' 2024-07-04T15:14:08,479 adding 'dadi/PortikModels/portik_models_2d.py' 2024-07-04T15:14:08,482 adding 'dadi/PortikModels/portik_models_3d.py' 2024-07-04T15:14:08,486 adding 'dadi/Triallele/TriSpectrum_mod.py' 2024-07-04T15:14:08,487 adding 'dadi/Triallele/__init__.py' 2024-07-04T15:14:08,488 adding 'dadi/Triallele/demographics.py' 2024-07-04T15:14:08,490 adding 'dadi/Triallele/integration.py' 2024-07-04T15:14:08,493 adding 'dadi/Triallele/numerics.py' 2024-07-04T15:14:08,495 adding 'dadi/Triallele/plotting.py' 2024-07-04T15:14:08,542 adding 'dadi/Triallele/transition1.c' 2024-07-04T15:14:08,646 adding 'dadi/Triallele/transition1.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,651 adding 'dadi/Triallele/transition1.pyx' 2024-07-04T15:14:08,692 adding 'dadi/Triallele/transition12.c' 2024-07-04T15:14:08,763 adding 'dadi/Triallele/transition12.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,766 adding 'dadi/Triallele/transition12.pyx' 2024-07-04T15:14:08,806 adding 'dadi/Triallele/transition1D.c' 2024-07-04T15:14:08,862 adding 'dadi/Triallele/transition1D.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:08,865 adding 'dadi/Triallele/transition1D.pyx' 2024-07-04T15:14:08,911 adding 'dadi/Triallele/transition2.c' 2024-07-04T15:14:09,015 adding 'dadi/Triallele/transition2.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,020 adding 'dadi/Triallele/transition2.pyx' 2024-07-04T15:14:09,024 adding 'dadi/TwoLocus/TLSpectrum_mod.py' 2024-07-04T15:14:09,025 adding 'dadi/TwoLocus/__init__.py' 2024-07-04T15:14:09,026 adding 'dadi/TwoLocus/demographics.py' 2024-07-04T15:14:09,029 adding 'dadi/TwoLocus/inference.py' 2024-07-04T15:14:09,030 adding 'dadi/TwoLocus/integration.py' 2024-07-04T15:14:09,037 adding 'dadi/TwoLocus/numerics.py' 2024-07-04T15:14:09,039 adding 'dadi/TwoLocus/plotting.py' 2024-07-04T15:14:09,075 adding 'dadi/TwoLocus/projection_genotypes.c' 2024-07-04T15:14:09,143 adding 'dadi/TwoLocus/projection_genotypes.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,146 adding 'dadi/TwoLocus/projection_genotypes.pyx' 2024-07-04T15:14:09,186 adding 'dadi/TwoLocus/surface_interaction.c' 2024-07-04T15:14:09,249 adding 'dadi/TwoLocus/surface_interaction.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,252 adding 'dadi/TwoLocus/surface_interaction.pyx' 2024-07-04T15:14:09,302 adding 'dadi/TwoLocus/transition1.c' 2024-07-04T15:14:09,402 adding 'dadi/TwoLocus/transition1.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,406 adding 'dadi/TwoLocus/transition1.pyx' 2024-07-04T15:14:09,449 adding 'dadi/TwoLocus/transition12.c' 2024-07-04T15:14:09,522 adding 'dadi/TwoLocus/transition12.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,526 adding 'dadi/TwoLocus/transition12.pyx' 2024-07-04T15:14:09,567 adding 'dadi/TwoLocus/transition13.c' 2024-07-04T15:14:09,639 adding 'dadi/TwoLocus/transition13.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,643 adding 'dadi/TwoLocus/transition13.pyx' 2024-07-04T15:14:09,682 adding 'dadi/TwoLocus/transition1D.c' 2024-07-04T15:14:09,743 adding 'dadi/TwoLocus/transition1D.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,746 adding 'dadi/TwoLocus/transition1D.pyx' 2024-07-04T15:14:09,795 adding 'dadi/TwoLocus/transition2.c' 2024-07-04T15:14:09,895 adding 'dadi/TwoLocus/transition2.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:09,899 adding 'dadi/TwoLocus/transition2.pyx' 2024-07-04T15:14:09,941 adding 'dadi/TwoLocus/transition23.c' 2024-07-04T15:14:10,013 adding 'dadi/TwoLocus/transition23.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:10,017 adding 'dadi/TwoLocus/transition23.pyx' 2024-07-04T15:14:10,066 adding 'dadi/TwoLocus/transition3.c' 2024-07-04T15:14:10,167 adding 'dadi/TwoLocus/transition3.cpython-311-arm-linux-gnueabihf.so' 2024-07-04T15:14:10,172 adding 'dadi/TwoLocus/transition3.pyx' 2024-07-04T15:14:10,176 adding 'dadi/cuda/Integration.py' 2024-07-04T15:14:10,177 adding 'dadi/cuda/__init__.py' 2024-07-04T15:14:10,179 adding 'dadi/cuda/cusparse.py' 2024-07-04T15:14:10,181 adding 'dadi/cuda/kernels.cu' 2024-07-04T15:14:10,182 adding 'dadi/cuda/kernels.py' 2024-07-04T15:14:10,184 adding 'dadi-2.3.5.dist-info/LICENSE.txt' 2024-07-04T15:14:10,186 adding 'dadi-2.3.5.dist-info/METADATA' 2024-07-04T15:14:10,187 adding 'dadi-2.3.5.dist-info/WHEEL' 2024-07-04T15:14:10,187 adding 'dadi-2.3.5.dist-info/top_level.txt' 2024-07-04T15:14:10,189 adding 'dadi-2.3.5.dist-info/RECORD' 2024-07-04T15:14:10,259 removing build/bdist.linux-armv7l/wheel 2024-07-04T15:14:10,487 Building wheel for dadi (pyproject.toml): finished with status 'done' 2024-07-04T15:14:10,564 Created wheel for dadi: filename=dadi-2.3.5-cp311-cp311-linux_armv7l.whl size=3946312 sha256=a6ee447ad1f3e0be1ba2622d4df26f019eb510b265326b53c055d321e8b93325 2024-07-04T15:14:10,565 Stored in directory: /tmp/pip-ephem-wheel-cache-dew9w_qo/wheels/bf/4f/08/ae39148fc066976fcf6966ba02deb87214f22a4afea0ec9c07 2024-07-04T15:14:10,579 Successfully built dadi 2024-07-04T15:14:10,684 Removed build tracker: '/tmp/pip-build-tracker-pur9_2xz'