2024-07-04T16:07:35,690 Created temporary directory: /tmp/pip-build-tracker-qsrje8ct 2024-07-04T16:07:35,691 Initialized build tracking at /tmp/pip-build-tracker-qsrje8ct 2024-07-04T16:07:35,691 Created build tracker: /tmp/pip-build-tracker-qsrje8ct 2024-07-04T16:07:35,692 Entered build tracker: /tmp/pip-build-tracker-qsrje8ct 2024-07-04T16:07:35,692 Created temporary directory: /tmp/pip-wheel-84r7ozzo 2024-07-04T16:07:35,696 Created temporary directory: /tmp/pip-ephem-wheel-cache-yvqwyds8 2024-07-04T16:07:35,723 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-04T16:07:35,726 2 location(s) to search for versions of dadi: 2024-07-04T16:07:35,726 * https://pypi.org/simple/dadi/ 2024-07-04T16:07:35,726 * https://www.piwheels.org/simple/dadi/ 2024-07-04T16:07:35,727 Fetching project page and analyzing links: https://pypi.org/simple/dadi/ 2024-07-04T16:07:35,728 Getting page https://pypi.org/simple/dadi/ 2024-07-04T16:07:35,729 Found index url https://pypi.org/simple/ 2024-07-04T16:07:35,780 Fetched page https://pypi.org/simple/dadi/ as application/vnd.pypi.simple.v1+json 2024-07-04T16:07:35,788 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a0/90/3c79d2526f0a8d618db53d12845c82e0c4da4d26e8cf3180a7d7074f348a/dadi-1.9.92-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,788 Found link https://files.pythonhosted.org/packages/41/b7/79564b96938451691e1505554798f4d62748ea25d64bf589e883455938da/dadi-1.9.92.tar.gz (from https://pypi.org/simple/dadi/), version: 1.9.92 2024-07-04T16:07:35,788 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/53/5e/fea903fd0c54bdd9d87e9d0a8e552204f4596bcbb40173d469742ac1ab6d/dadi-2.0.1-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,789 Found link https://files.pythonhosted.org/packages/06/94/dbf599959d8a04ea52c520414d1af185a8f57cd2c2be7181af97e927852a/dadi-2.0.1.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.1 2024-07-04T16:07:35,789 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2e/b8/8b868a117552fde24a5d513e8673fa059bd106fc87c1bb8743b000cc343d/dadi-2.0.2-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,789 Found link https://files.pythonhosted.org/packages/05/3c/0679df7beac434aa1dfaae53ef4b1717d849dcc8b7eadf2ef0f42545f22c/dadi-2.0.2.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.2 2024-07-04T16:07:35,789 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/2b/87/9645c8580abd51d5be25532f7927e067020cf03871b5a1468c29849a72af/dadi-2.0.3-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,790 Found link https://files.pythonhosted.org/packages/20/43/6bb9b18f73e31701eeff2f69ca3964ea8ce483bd444ecb4c8bc3a20350f1/dadi-2.0.3.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.3 2024-07-04T16:07:35,790 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/3b/59/aef8d0105a55ea7024c0fdae8b5d981bc02ae2dce6c962a3ab5c838c87ee/dadi-2.0.4-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,790 Found link https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.4 2024-07-04T16:07:35,790 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/b9/12/7c937c7d55f57f519b15ae85b3a893915a91aeddeb86b60d204d9b8a0b95/dadi-2.0.5-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,791 Found link https://files.pythonhosted.org/packages/1d/79/b0703bf0a3bccfd46243719970c4c12ef9d25702c1c1f11a38cd858feeba/dadi-2.0.5.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.5 2024-07-04T16:07:35,791 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/bf/ec/4028c2bc860bc5fd000757a85580f06d372cf0093ad3d69fc337f4e3638f/dadi-2.0.6-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,791 Found link https://files.pythonhosted.org/packages/8f/37/bd2a39f621a56e9c48d8bfe234583e1de6548c78fb56ada775e0f660ecd4/dadi-2.0.6.tar.gz (from https://pypi.org/simple/dadi/), version: 2.0.6 2024-07-04T16:07:35,791 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/68/7a/555e1602617ed94760f124020cd81e93387a50111223161fa1aef70fc203/dadi-2.1.0-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,792 Found link https://files.pythonhosted.org/packages/ef/2d/b8636392a28b5d7fe2665a15ab9899651ed7e2af7264c8685e648371aa5c/dadi-2.1.0.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.0 2024-07-04T16:07:35,792 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/a9/c7/ee88baf9a99dcca548908e6ecada3994098b18084ee3b796600b471eaa0c/dadi-2.1.1-cp37-cp37m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,792 Found link https://files.pythonhosted.org/packages/ce/ab/d47b4d850b6974c0d1352547c8962facd2550225ddf2aa7aa6d96d73ec8d/dadi-2.1.1.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.1 2024-07-04T16:07:35,792 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/1b/7c/1d9cc47d8c3e0b5b66c33d780964b21d53025941d39c545a0c6f58f73e97/dadi-2.1.2-cp39-cp39-macosx_12_0_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,793 Found link https://files.pythonhosted.org/packages/10/c2/90726e2b680e9e4819abbba3fc4bf7ba947c70d96cb7c4f831e99823eb22/dadi-2.1.2.tar.gz (from https://pypi.org/simple/dadi/), version: 2.1.2 2024-07-04T16:07:35,793 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/06/7b/3e77ba75ebf371859811d1bb8d461542bb0ed2f65ff353dda524a93c211f/dadi-2.2.0-cp39-cp39-macosx_12_0_x86_64.whl (from https://pypi.org/simple/dadi/) 2024-07-04T16:07:35,793 Found link https://files.pythonhosted.org/packages/48/db/c49468bb195a119526715367ec04e667af01f5c6cf147ef90820b0beb617/dadi-2.2.0.tar.gz (from https://pypi.org/simple/dadi/), version: 2.2.0 2024-07-04T16:07:35,793 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/4b/1a/2b2910fc31276a0beea0113c1b1b77f9016c2e36048ed7b1edd41506de96/dadi-2.3.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,794 Found link https://files.pythonhosted.org/packages/1c/c6/bdf4461a4fabc7719de6aa26b5a0781463a0f0ced57484f9e2f882e065f3/dadi-2.3.0.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.0 2024-07-04T16:07:35,794 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/b4/65/2b336a01a7ea2ddd0a10e5fe6ade2c92f27c3dcd8675aba7ca646709b977/dadi-2.3.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,795 Found link https://files.pythonhosted.org/packages/08/80/99c8ba23ad3d7dae30aa6e62a25acb3cb9b1c07c4086d11f6f8e6924ff49/dadi-2.3.1.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.1 2024-07-04T16:07:35,795 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/cd/83/2123d7020476d22b48a024c5f35a2e49526d21e02e6a9cf77470c5e77369/dadi-2.3.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,796 Found link https://files.pythonhosted.org/packages/e0/69/13ec113d0b5a001bc558a07810cb6562281b2139f2f88459ebf023795572/dadi-2.3.2.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.2 2024-07-04T16:07:35,796 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/11/10/54dddd9308d6d23633631dd1b2ff6e1a1c69b68a44ed89298ff4bc0d28f6/dadi-2.3.3-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,796 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/0a/d2/1c8329a90e61870f4b398690d57a7ab72fec30358848849714272a622ca3/dadi-2.3.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,797 Found link https://files.pythonhosted.org/packages/9b/17/d309afa9d576d42453d894a1cddb71c5872530097b9e6ec4cf78ed8a759e/dadi-2.3.3.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.3 2024-07-04T16:07:35,797 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/54/26/d26545c696d9c512088c31229c78bf5d37bafc4098cda68aa7bb9b9fb4ce/dadi-2.3.4-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,798 Found link https://files.pythonhosted.org/packages/99/ec/a28a521b127c4ca0d5281e711b9c8d4e5a37a6b7c01532f1063b5547badd/dadi-2.3.4.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.4 2024-07-04T16:07:35,798 Skipping link: No binaries permitted for dadi: https://files.pythonhosted.org/packages/97/d8/e013acdd0e8f16298ed5981e7ce33a7122ce0abe34412d73250ef073b888/dadi-2.3.5-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,798 Found link https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz (from https://pypi.org/simple/dadi/) (requires-python:>=3.7), version: 2.3.5 2024-07-04T16:07:35,799 Fetching project page and analyzing links: https://www.piwheels.org/simple/dadi/ 2024-07-04T16:07:35,799 Getting page https://www.piwheels.org/simple/dadi/ 2024-07-04T16:07:35,800 Found index url https://www.piwheels.org/simple/ 2024-07-04T16:07:35,880 Fetched page https://www.piwheels.org/simple/dadi/ as text/html 2024-07-04T16:07:35,900 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.5-cp311-cp311-linux_armv6l.whl#sha256=a6ee447ad1f3e0be1ba2622d4df26f019eb510b265326b53c055d321e8b93325 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,900 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.5-cp311-cp311-linux_armv7l.whl#sha256=a6ee447ad1f3e0be1ba2622d4df26f019eb510b265326b53c055d321e8b93325 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,900 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp311-cp311-linux_armv6l.whl#sha256=8cc260a7556237fa9ab41be3614bee9586972d65e0c95758fed0fb6d13dd9333 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,900 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp311-cp311-linux_armv7l.whl#sha256=8cc260a7556237fa9ab41be3614bee9586972d65e0c95758fed0fb6d13dd9333 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,901 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=007669fc83201d0dc2ad0275621c926895d68f31bd6284dab1488d77fb663986 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,901 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=007669fc83201d0dc2ad0275621c926895d68f31bd6284dab1488d77fb663986 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,901 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp311-cp311-linux_armv6l.whl#sha256=9d7c7ecfe3a16d68eca1dbb5280842342bbb73ae8bbdb6a3502e4321e92e88f8 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,901 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp311-cp311-linux_armv7l.whl#sha256=9d7c7ecfe3a16d68eca1dbb5280842342bbb73ae8bbdb6a3502e4321e92e88f8 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,901 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=48d46786c5f7eb5ac7649da69fbcb6eee9869785e7c4321cde406ba0a0fc86a0 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,902 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=48d46786c5f7eb5ac7649da69fbcb6eee9869785e7c4321cde406ba0a0fc86a0 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,902 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=592e30dcbfb92fed77952f87ea29eedc1c274bee720ddc45753cb0fa0248c302 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,902 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=592e30dcbfb92fed77952f87ea29eedc1c274bee720ddc45753cb0fa0248c302 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,902 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=603747192ce4935baa4e2e61e4a782ff1b4c8abc06c626f747b2e7e7967db40b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,902 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=603747192ce4935baa4e2e61e4a782ff1b4c8abc06c626f747b2e7e7967db40b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,903 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=251ca335e86da7f14848971549e4135185a138b905d2f0a2b12ccfada4c223eb (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,903 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=251ca335e86da7f14848971549e4135185a138b905d2f0a2b12ccfada4c223eb (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,903 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp311-cp311-linux_armv6l.whl#sha256=af477e8f3ed70569d9339ce2a0fdaf76e481769fd782a619a90ff5b399bd9dd5 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,903 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.2-cp311-cp311-linux_armv7l.whl#sha256=af477e8f3ed70569d9339ce2a0fdaf76e481769fd782a619a90ff5b399bd9dd5 (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,903 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=867c25b7ddbfa88fd33dd4be8fcf03023c17ce39e22e575964c8cd7d487079db (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,904 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=867c25b7ddbfa88fd33dd4be8fcf03023c17ce39e22e575964c8cd7d487079db (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,904 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=2a3f3ed4ebcce48cbba2166258a739c3dd0bc771bf3b3a7579547defd7189a1d (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,904 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=2a3f3ed4ebcce48cbba2166258a739c3dd0bc771bf3b3a7579547defd7189a1d (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,904 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp311-cp311-linux_armv6l.whl#sha256=1d661bff154759443c658339bccf44107b1979e672c429d9141d28401612ed5b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,904 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.1-cp311-cp311-linux_armv7l.whl#sha256=1d661bff154759443c658339bccf44107b1979e672c429d9141d28401612ed5b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,905 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=7caced6ceb6f513ba30f3126d102019987fc087a373f244b81244d9213b0836b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,905 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=7caced6ceb6f513ba30f3126d102019987fc087a373f244b81244d9213b0836b (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,905 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=12fc57ba2957a89355a53d3557f272bcc629c2ca4448646189d6f440752e344c (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,905 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=12fc57ba2957a89355a53d3557f272bcc629c2ca4448646189d6f440752e344c (from https://www.piwheels.org/simple/dadi/) (requires-python:>=3.7) 2024-07-04T16:07:35,905 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp37-cp37m-linux_armv6l.whl#sha256=61c6429da2b23f979e962680ddb5d9179835d23777ad694daea64088d0953015 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=61c6429da2b23f979e962680ddb5d9179835d23777ad694daea64088d0953015 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp39-cp39-linux_armv6l.whl#sha256=da6183aeef1529c53251bd1049d177222c5203e40f9c55137254da0136e25c23 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.2.0-cp39-cp39-linux_armv7l.whl#sha256=da6183aeef1529c53251bd1049d177222c5203e40f9c55137254da0136e25c23 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=3c07f6d3b7d675b4c4e05195e958d8d30310a4087d0d9eac169df04a7a5bdcb4 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=3c07f6d3b7d675b4c4e05195e958d8d30310a4087d0d9eac169df04a7a5bdcb4 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,906 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=fc5cd995814ff9554ea570d11bd9ef53a5dcb22d910ab7fc97a8efca061f7b59 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,907 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=fc5cd995814ff9554ea570d11bd9ef53a5dcb22d910ab7fc97a8efca061f7b59 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,907 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp37-cp37m-linux_armv6l.whl#sha256=ff14e3da011d24125ed2957d107e760c25c513c9754454dc9c112dc6b22ddd32 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,907 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp37-cp37m-linux_armv7l.whl#sha256=ff14e3da011d24125ed2957d107e760c25c513c9754454dc9c112dc6b22ddd32 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,907 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp39-cp39-linux_armv6l.whl#sha256=3426c196c9709856b9deb9326f11a7cec3c73fb325280a241511468943fabac8 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,907 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.1-cp39-cp39-linux_armv7l.whl#sha256=3426c196c9709856b9deb9326f11a7cec3c73fb325280a241511468943fabac8 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,908 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fce46a4fb7ce4029ec332287307a3b5a746ca21d44a4ec78ab4fa0355db10a8d (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,908 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fce46a4fb7ce4029ec332287307a3b5a746ca21d44a4ec78ab4fa0355db10a8d (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,908 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=607a339c8a8202071af6d868d4b815da65da6c682aa227ffd33bb95c006405e5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,908 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=607a339c8a8202071af6d868d4b815da65da6c682aa227ffd33bb95c006405e5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,908 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp34-cp34m-linux_armv6l.whl#sha256=2a620e1e1c3fccbd63ef80dd67f74aea2a7d9530c274b17abdd78c3cf65d3c5b (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,909 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp34-cp34m-linux_armv7l.whl#sha256=2a620e1e1c3fccbd63ef80dd67f74aea2a7d9530c274b17abdd78c3cf65d3c5b (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,909 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp37-cp37m-linux_armv6l.whl#sha256=b776119773d312bf513a12920fcc483146ebfae22b1e30566ad6068f645c62ec (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,909 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp37-cp37m-linux_armv7l.whl#sha256=b776119773d312bf513a12920fcc483146ebfae22b1e30566ad6068f645c62ec (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,909 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp39-cp39-linux_armv6l.whl#sha256=86b9f6de74230683762b2a188aeaf805d5d31e5c75126938a9e48f0a7b054aa5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,909 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.6-cp39-cp39-linux_armv7l.whl#sha256=86b9f6de74230683762b2a188aeaf805d5d31e5c75126938a9e48f0a7b054aa5 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp37-cp37m-linux_armv7l.whl#sha256=22f8b73b3c5e532e46a4078c73fa874d4d84920bfb968da50e1899a98ca4b82f (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp37-cp37m-linux_armv6l.whl#sha256=22f8b73b3c5e532e46a4078c73fa874d4d84920bfb968da50e1899a98ca4b82f (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp34-cp34m-linux_armv7l.whl#sha256=026feda118c1a7ebcc097d307e6f0d5c0eb8f9fdcb058753b45840b0ab092be0 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp34-cp34m-linux_armv6l.whl#sha256=026feda118c1a7ebcc097d307e6f0d5c0eb8f9fdcb058753b45840b0ab092be0 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp39-cp39-linux_armv6l.whl#sha256=466f52fb72edaf5930c8ab08ad4e20089507d847f5e39664db30038400664104 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,910 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.5-cp39-cp39-linux_armv7l.whl#sha256=466f52fb72edaf5930c8ab08ad4e20089507d847f5e39664db30038400664104 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,911 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp34-cp34m-linux_armv6l.whl#sha256=336fb3ed58bb369bd8e04d894703c4e2d28b2ce4dec9850c9ac6f91d53056bad (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,911 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp34-cp34m-linux_armv7l.whl#sha256=336fb3ed58bb369bd8e04d894703c4e2d28b2ce4dec9850c9ac6f91d53056bad (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,911 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp37-cp37m-linux_armv6l.whl#sha256=9ba0915a1b144a6ece4b4e63b9c83416cba293ea42efc2208e01cb0f5f757a99 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,911 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp37-cp37m-linux_armv7l.whl#sha256=9ba0915a1b144a6ece4b4e63b9c83416cba293ea42efc2208e01cb0f5f757a99 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,911 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp39-cp39-linux_armv6l.whl#sha256=967433ce1bea71bc1a0ccb6db1cf36dd4db91839d72462e75a34d2875e330eed (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,912 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.4-cp39-cp39-linux_armv7l.whl#sha256=967433ce1bea71bc1a0ccb6db1cf36dd4db91839d72462e75a34d2875e330eed (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,912 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp39-cp39-linux_armv6l.whl#sha256=b735b38c2db6d63cac4265995c6d35e367408da3aaf9617911864d564cbd7936 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,912 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp39-cp39-linux_armv7l.whl#sha256=b735b38c2db6d63cac4265995c6d35e367408da3aaf9617911864d564cbd7936 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,912 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp37-cp37m-linux_armv7l.whl#sha256=671edb168be5edfef4bc856b14eabffffa393ed08237e0f8c4000e382302bf4c (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,912 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.3-cp37-cp37m-linux_armv6l.whl#sha256=671edb168be5edfef4bc856b14eabffffa393ed08237e0f8c4000e382302bf4c (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,913 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=39b16e5db982ee6579aebd2a6292a29aa8f97e28b0c37bf9ab3553a207c83344 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,913 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=39b16e5db982ee6579aebd2a6292a29aa8f97e28b0c37bf9ab3553a207c83344 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,913 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp34-cp34m-linux_armv6l.whl#sha256=50f3a84bbaca0b761ec2017034a29956e966f7a6174b555dedbd223d1c5c0c04 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,913 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp34-cp34m-linux_armv7l.whl#sha256=50f3a84bbaca0b761ec2017034a29956e966f7a6174b555dedbd223d1c5c0c04 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,913 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=cf393f43e316c1323bd025065053612b3435ad250728f760ecb6abe91b2deca9 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,914 Skipping link: No binaries permitted for dadi: https://www.piwheels.org/simple/dadi/dadi-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=cf393f43e316c1323bd025065053612b3435ad250728f760ecb6abe91b2deca9 (from https://www.piwheels.org/simple/dadi/) 2024-07-04T16:07:35,914 Skipping link: not a file: https://www.piwheels.org/simple/dadi/ 2024-07-04T16:07:35,914 Skipping link: not a file: https://pypi.org/simple/dadi/ 2024-07-04T16:07:35,932 Given no hashes to check 1 links for project 'dadi': discarding no candidates 2024-07-04T16:07:35,948 Collecting dadi==2.3.5 2024-07-04T16:07:35,950 Created temporary directory: /tmp/pip-unpack-v9fks54c 2024-07-04T16:07:35,992 Downloading dadi-2.3.5.tar.gz (3.7 MB) 2024-07-04T16:07:37,926 Added dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-qsrje8ct' 2024-07-04T16:07:37,933 Created temporary directory: /tmp/pip-build-env-k0i9c1of 2024-07-04T16:07:37,942 Installing build dependencies: started 2024-07-04T16:07:37,943 Running command pip subprocess to install build dependencies 2024-07-04T16:07:39,126 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-07-04T16:07:39,641 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-04T16:07:39,974 Collecting wheel 2024-07-04T16:07:39,990 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-07-04T16:07:41,034 Collecting numpy 2024-07-04T16:07:41,051 Using cached https://www.piwheels.org/simple/numpy/numpy-2.0.0-cp39-cp39-linux_armv7l.whl (5.8 MB) 2024-07-04T16:07:42,575 Collecting Cython 2024-07-04T16:07:42,592 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp39-cp39-linux_armv7l.whl (10.7 MB) 2024-07-04T16:07:43,008 Collecting bdist_mpkg 2024-07-04T16:07:43,021 Downloading https://www.piwheels.org/simple/bdist-mpkg/bdist_mpkg-0.5.0-py3-none-any.whl (20 kB) 2024-07-04T16:07:43,342 Collecting setuptools-scm 2024-07-04T16:07:43,358 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-04T16:07:43,609 Collecting packaging>=20 (from setuptools-scm) 2024-07-04T16:07:43,626 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-04T16:07:44,970 Collecting setuptools (from setuptools-scm) 2024-07-04T16:07:44,986 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.2.0-py3-none-any.whl (930 kB) 2024-07-04T16:07:45,158 Collecting typing-extensions (from setuptools-scm) 2024-07-04T16:07:45,177 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.12.2-py3-none-any.whl (37 kB) 2024-07-04T16:07:45,290 Collecting tomli>=1 (from setuptools-scm) 2024-07-04T16:07:45,309 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2024-07-04T16:07:47,191 Installing collected packages: bdist_mpkg, wheel, typing-extensions, tomli, setuptools, packaging, numpy, Cython, setuptools-scm 2024-07-04T16:07:47,290 Creating /tmp/pip-build-env-k0i9c1of/overlay/bin 2024-07-04T16:07:47,292 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/bdist_mpkg to 755 2024-07-04T16:07:47,295 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/reown_mpkg to 755 2024-07-04T16:07:47,516 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/wheel to 755 2024-07-04T16:07:57,954 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/f2py to 755 2024-07-04T16:07:57,957 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/numpy-config to 755 2024-07-04T16:08:01,460 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/cygdb to 755 2024-07-04T16:08:01,462 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/cython to 755 2024-07-04T16:08:01,464 changing mode of /tmp/pip-build-env-k0i9c1of/overlay/bin/cythonize to 755 2024-07-04T16:08:01,698 Successfully installed Cython-3.0.10 bdist_mpkg-0.5.0 numpy-2.0.0 packaging-24.1 setuptools-70.2.0 setuptools-scm-8.1.0 tomli-2.0.1 typing-extensions-4.12.2 wheel-0.43.0 2024-07-04T16:08:02,947 [notice] A new release of pip is available: 24.0 -> 24.1.1 2024-07-04T16:08:02,947 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-04T16:08:03,705 Installing build dependencies: finished with status 'done' 2024-07-04T16:08:03,710 Getting requirements to build wheel: started 2024-07-04T16:08:03,711 Running command Getting requirements to build wheel 2024-07-04T16:08:06,034 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/DFE/PDFs_cython.pyx 2024-07-04T16:08:06,034 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:06,896 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/Triallele/transition1.pyx 2024-07-04T16:08:06,896 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:07,833 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/Triallele/transition12.pyx 2024-07-04T16:08:07,834 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:08,714 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/Triallele/transition1D.pyx 2024-07-04T16:08:08,715 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:09,445 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/Triallele/transition2.pyx 2024-07-04T16:08:09,445 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:10,437 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/projection_genotypes.pyx 2024-07-04T16:08:10,438 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:11,116 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/surface_interaction.pyx 2024-07-04T16:08:11,116 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:12,048 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition1.pyx 2024-07-04T16:08:12,048 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:13,143 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition12.pyx 2024-07-04T16:08:13,143 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:13,932 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition13.pyx 2024-07-04T16:08:13,932 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:14,914 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition1D.pyx 2024-07-04T16:08:14,914 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:15,646 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition2.pyx 2024-07-04T16:08:15,646 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:16,773 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition23.pyx 2024-07-04T16:08:16,773 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:17,790 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/TwoLocus/transition3.pyx 2024-07-04T16:08:17,790 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:18,695 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/integration_c.pyx 2024-07-04T16:08:18,696 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:19,960 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3/dadi/tridiag_cython.pyx 2024-07-04T16:08:19,960 tree = Parsing.p_module(s, pxd, full_module_name) 2024-07-04T16:08:20,858 Compiling dadi/tridiag_cython.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,858 Compiling dadi/integration_c.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,858 Compiling dadi/DFE/PDFs_cython.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,858 Compiling dadi/Triallele/transition1.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,858 Compiling dadi/Triallele/transition2.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,858 Compiling dadi/Triallele/transition12.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/Triallele/transition1D.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/TwoLocus/projection_genotypes.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/TwoLocus/surface_interaction.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/TwoLocus/transition1.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/TwoLocus/transition2.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,859 Compiling dadi/TwoLocus/transition3.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,860 Compiling dadi/TwoLocus/transition12.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,860 Compiling dadi/TwoLocus/transition13.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,860 Compiling dadi/TwoLocus/transition23.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,860 Compiling dadi/TwoLocus/transition1D.pyx because it depends on /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd. 2024-07-04T16:08:20,860 [ 1/16] Cythonizing dadi/DFE/PDFs_cython.pyx 2024-07-04T16:08:20,860 [ 2/16] Cythonizing dadi/Triallele/transition1.pyx 2024-07-04T16:08:20,860 [ 3/16] Cythonizing dadi/Triallele/transition12.pyx 2024-07-04T16:08:20,861 [ 4/16] Cythonizing dadi/Triallele/transition1D.pyx 2024-07-04T16:08:20,861 [ 5/16] Cythonizing dadi/Triallele/transition2.pyx 2024-07-04T16:08:20,861 [ 6/16] Cythonizing dadi/TwoLocus/projection_genotypes.pyx 2024-07-04T16:08:20,861 [ 7/16] Cythonizing dadi/TwoLocus/surface_interaction.pyx 2024-07-04T16:08:20,861 [ 8/16] Cythonizing dadi/TwoLocus/transition1.pyx 2024-07-04T16:08:20,861 [ 9/16] Cythonizing dadi/TwoLocus/transition12.pyx 2024-07-04T16:08:20,861 [10/16] Cythonizing dadi/TwoLocus/transition13.pyx 2024-07-04T16:08:20,862 [11/16] Cythonizing dadi/TwoLocus/transition1D.pyx 2024-07-04T16:08:20,862 [12/16] Cythonizing dadi/TwoLocus/transition2.pyx 2024-07-04T16:08:20,862 [13/16] Cythonizing dadi/TwoLocus/transition23.pyx 2024-07-04T16:08:20,862 [14/16] Cythonizing dadi/TwoLocus/transition3.pyx 2024-07-04T16:08:20,862 [15/16] Cythonizing dadi/integration_c.pyx 2024-07-04T16:08:20,862 [16/16] Cythonizing dadi/tridiag_cython.pyx 2024-07-04T16:08:21,293 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.9/plistlib.py) 2024-07-04T16:08:21,328 running egg_info 2024-07-04T16:08:21,337 writing dadi.egg-info/PKG-INFO 2024-07-04T16:08:21,340 writing dependency_links to dadi.egg-info/dependency_links.txt 2024-07-04T16:08:21,342 writing requirements to dadi.egg-info/requires.txt 2024-07-04T16:08:21,343 writing top-level names to dadi.egg-info/top_level.txt 2024-07-04T16:08:21,431 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T16:08:21,454 reading manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:21,528 reading manifest template 'MANIFEST.in' 2024-07-04T16:08:21,609 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T16:08:21,638 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T16:08:21,668 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T16:08:21,817 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T16:08:21,820 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T16:08:21,823 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T16:08:21,826 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T16:08:21,829 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T16:08:21,832 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T16:08:21,835 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T16:08:21,838 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T16:08:21,840 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T16:08:21,841 adding license file 'LICENSE.txt' 2024-07-04T16:08:21,871 writing manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:22,915 Getting requirements to build wheel: finished with status 'done' 2024-07-04T16:08:22,919 Created temporary directory: /tmp/pip-modern-metadata-dcnqm5ga 2024-07-04T16:08:22,922 Preparing metadata (pyproject.toml): started 2024-07-04T16:08:22,923 Running command Preparing metadata (pyproject.toml) 2024-07-04T16:08:24,816 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.9/plistlib.py) 2024-07-04T16:08:24,851 running dist_info 2024-07-04T16:08:24,860 creating /tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info 2024-07-04T16:08:24,867 writing /tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/PKG-INFO 2024-07-04T16:08:24,870 writing dependency_links to /tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/dependency_links.txt 2024-07-04T16:08:24,872 writing requirements to /tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/requires.txt 2024-07-04T16:08:24,873 writing top-level names to /tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/top_level.txt 2024-07-04T16:08:24,875 writing manifest file '/tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:24,946 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T16:08:24,956 reading manifest file '/tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:24,959 reading manifest template 'MANIFEST.in' 2024-07-04T16:08:25,033 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T16:08:25,062 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T16:08:25,091 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T16:08:25,228 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T16:08:25,230 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T16:08:25,231 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T16:08:25,233 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T16:08:25,235 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T16:08:25,236 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T16:08:25,238 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T16:08:25,240 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T16:08:25,241 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T16:08:25,241 adding license file 'LICENSE.txt' 2024-07-04T16:08:25,261 writing manifest file '/tmp/pip-modern-metadata-dcnqm5ga/dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:25,263 creating '/tmp/pip-modern-metadata-dcnqm5ga/dadi-2.3.5.dist-info' 2024-07-04T16:08:25,465 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-04T16:08:25,471 Source in /tmp/pip-wheel-84r7ozzo/dadi_3857d177de514edcb8feef2d27b1dcf3 has version 2.3.5, which satisfies requirement dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz 2024-07-04T16:08:25,472 Removed dadi==2.3.5 from https://files.pythonhosted.org/packages/77/a8/047976a5f0b0f18b588a927dab94ea7dc503fe485d33c1e4b0f82bf19aed/dadi-2.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-qsrje8ct' 2024-07-04T16:08:25,478 Created temporary directory: /tmp/pip-unpack-di__uolv 2024-07-04T16:08:25,479 Created temporary directory: /tmp/pip-unpack-rswbnmu_ 2024-07-04T16:08:25,485 Building wheels for collected packages: dadi 2024-07-04T16:08:25,490 Created temporary directory: /tmp/pip-wheel-c1q391e4 2024-07-04T16:08:25,490 Destination directory: /tmp/pip-wheel-c1q391e4 2024-07-04T16:08:25,492 Building wheel for dadi (pyproject.toml): started 2024-07-04T16:08:25,493 Running command Building wheel for dadi (pyproject.toml) 2024-07-04T16:08:27,324 ImportError while trying to load entry-point bdist_mpkg: cannot import name 'Plist' from 'plistlib' (/usr/lib/python3.9/plistlib.py) 2024-07-04T16:08:27,351 running bdist_wheel 2024-07-04T16:08:27,386 running build 2024-07-04T16:08:27,386 running build_py 2024-07-04T16:08:27,396 creating build 2024-07-04T16:08:27,397 creating build/lib.linux-armv7l-cpython-39 2024-07-04T16:08:27,398 creating build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,399 copying dadi/NLopt_mod.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,401 copying dadi/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,403 copying dadi/Inference.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,406 copying dadi/Demographics3D.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,407 copying dadi/Integration.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,410 copying dadi/Demographics2D.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,412 copying dadi/Misc.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,415 copying dadi/PhiManip.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,418 copying dadi/Demographics1D.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,419 copying dadi/Plotting.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,422 copying dadi/Godambe.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,425 copying dadi/Spectrum_mod.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,429 copying dadi/Numerics.py -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,432 creating build/lib.linux-armv7l-cpython-39/dadi/Demes 2024-07-04T16:08:27,433 copying dadi/Demes/Demes.py -> build/lib.linux-armv7l-cpython-39/dadi/Demes 2024-07-04T16:08:27,436 copying dadi/Demes/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi/Demes 2024-07-04T16:08:27,438 creating build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,439 copying dadi/Triallele/TriSpectrum_mod.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,442 copying dadi/Triallele/integration.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,444 copying dadi/Triallele/demographics.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,446 copying dadi/Triallele/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,448 copying dadi/Triallele/numerics.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,450 copying dadi/Triallele/plotting.py -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:27,453 creating build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,454 copying dadi/DFE/Cache2D_mod.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,456 copying dadi/DFE/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,458 copying dadi/DFE/Plotting.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,460 copying dadi/DFE/Vourlaki2022.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,462 copying dadi/DFE/PDFs.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,464 copying dadi/DFE/Cache1D_mod.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,466 copying dadi/DFE/DemogSelModels.py -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:27,469 creating build/lib.linux-armv7l-cpython-39/dadi/PortikModels 2024-07-04T16:08:27,470 copying dadi/PortikModels/portik_models_3d.py -> build/lib.linux-armv7l-cpython-39/dadi/PortikModels 2024-07-04T16:08:27,474 copying dadi/PortikModels/portik_models_2d.py -> build/lib.linux-armv7l-cpython-39/dadi/PortikModels 2024-07-04T16:08:27,478 creating build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,478 copying dadi/TwoLocus/integration.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,481 copying dadi/TwoLocus/demographics.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,483 copying dadi/TwoLocus/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,484 copying dadi/TwoLocus/numerics.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,488 copying dadi/TwoLocus/inference.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,490 copying dadi/TwoLocus/plotting.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,492 copying dadi/TwoLocus/TLSpectrum_mod.py -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:27,495 creating build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:27,496 copying dadi/cuda/kernels.py -> build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:27,498 copying dadi/cuda/__init__.py -> build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:27,499 copying dadi/cuda/Integration.py -> build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:27,502 copying dadi/cuda/cusparse.py -> build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:27,504 running egg_info 2024-07-04T16:08:27,511 writing dadi.egg-info/PKG-INFO 2024-07-04T16:08:27,514 writing dependency_links to dadi.egg-info/dependency_links.txt 2024-07-04T16:08:27,516 writing requirements to dadi.egg-info/requires.txt 2024-07-04T16:08:27,517 writing top-level names to dadi.egg-info/top_level.txt 2024-07-04T16:08:27,568 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-04T16:08:27,578 reading manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:27,594 reading manifest template 'MANIFEST.in' 2024-07-04T16:08:27,668 warning: no files found matching 'manual.pdf' under directory 'doc' 2024-07-04T16:08:27,699 warning: no files found matching '*.tex' under directory 'doc' 2024-07-04T16:08:27,729 warning: no files found matching '*.bib' under directory 'doc' 2024-07-04T16:08:27,871 warning: no previously-included files matching '*.msout' found anywhere in distribution 2024-07-04T16:08:27,875 warning: no previously-included files matching '*.swp' found anywhere in distribution 2024-07-04T16:08:27,878 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2024-07-04T16:08:27,880 warning: no previously-included files matching 'seedms' found anywhere in distribution 2024-07-04T16:08:27,883 warning: no previously-included files matching '*.png' found anywhere in distribution 2024-07-04T16:08:27,886 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2024-07-04T16:08:27,889 warning: no previously-included files matching '*.npz' found anywhere in distribution 2024-07-04T16:08:27,891 warning: no previously-included files matching '*.so' found anywhere in distribution 2024-07-04T16:08:27,895 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2024-07-04T16:08:27,895 adding license file 'LICENSE.txt' 2024-07-04T16:08:27,925 writing manifest file 'dadi.egg-info/SOURCES.txt' 2024-07-04T16:08:27,960 copying dadi/integration1D.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,962 copying dadi/integration2D.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,964 copying dadi/integration3D.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,967 copying dadi/integration4D.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,969 copying dadi/integration5D.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,972 copying dadi/integration_c.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,991 copying dadi/integration_c.pyx -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,993 copying dadi/integration_cython.h -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,995 copying dadi/integration_shared.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,998 copying dadi/integration_shared.h -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:27,999 copying dadi/tridiag.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:28,001 copying dadi/tridiag.h -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:28,003 copying dadi/tridiag_cython.c -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:28,014 copying dadi/tridiag_cython.pyx -> build/lib.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:28,016 copying dadi/Triallele/transition1.c -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,032 copying dadi/Triallele/transition1.pyx -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,034 copying dadi/Triallele/transition12.c -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,047 copying dadi/Triallele/transition12.pyx -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,050 copying dadi/Triallele/transition1D.c -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,062 copying dadi/Triallele/transition1D.pyx -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,065 copying dadi/Triallele/transition2.c -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,081 copying dadi/Triallele/transition2.pyx -> build/lib.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:28,083 copying dadi/DFE/LICENSE -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:28,085 copying dadi/DFE/PDFs.c -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:28,087 copying dadi/DFE/PDFs.pyf -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:28,089 copying dadi/DFE/PDFs_cython.c -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:28,100 copying dadi/DFE/PDFs_cython.pyx -> build/lib.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:28,102 copying dadi/PortikModels/LICENSE -> build/lib.linux-armv7l-cpython-39/dadi/PortikModels 2024-07-04T16:08:28,104 copying dadi/TwoLocus/projection_genotypes.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,117 copying dadi/TwoLocus/projection_genotypes.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,119 copying dadi/TwoLocus/surface_interaction.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,132 copying dadi/TwoLocus/surface_interaction.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,134 copying dadi/TwoLocus/transition1.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,152 copying dadi/TwoLocus/transition1.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,154 copying dadi/TwoLocus/transition12.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,168 copying dadi/TwoLocus/transition12.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,170 copying dadi/TwoLocus/transition13.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,184 copying dadi/TwoLocus/transition13.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,186 copying dadi/TwoLocus/transition1D.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,199 copying dadi/TwoLocus/transition1D.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,201 copying dadi/TwoLocus/transition2.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,213 copying dadi/TwoLocus/transition2.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,215 copying dadi/TwoLocus/transition23.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,227 copying dadi/TwoLocus/transition23.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,229 copying dadi/TwoLocus/transition3.c -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,243 copying dadi/TwoLocus/transition3.pyx -> build/lib.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:08:28,246 copying dadi/cuda/kernels.cu -> build/lib.linux-armv7l-cpython-39/dadi/cuda 2024-07-04T16:08:28,253 running build_ext 2024-07-04T16:08:28,261 building 'dadi.tridiag_cython' extension 2024-07-04T16:08:28,262 creating build/temp.linux-armv7l-cpython-39 2024-07-04T16:08:28,263 creating build/temp.linux-armv7l-cpython-39/dadi 2024-07-04T16:08:28,264 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/tridiag.c -o build/temp.linux-armv7l-cpython-39/dadi/tridiag.o 2024-07-04T16:08:28,464 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/tridiag_cython.c -o build/temp.linux-armv7l-cpython-39/dadi/tridiag_cython.o 2024-07-04T16:08:28,804 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:08:28,804 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:08:28,804 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:08:28,805 from dadi/tridiag_cython.c:1246: 2024-07-04T16:08:28,805 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:08:28,805 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:08:28,805 | ^~~~~~~ 2024-07-04T16:08:31,736 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/tridiag.o build/temp.linux-armv7l-cpython-39/dadi/tridiag_cython.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/tridiag_cython.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:08:31,848 building 'dadi.integration_c' extension 2024-07-04T16:08:31,849 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration1D.c -o build/temp.linux-armv7l-cpython-39/dadi/integration1D.o 2024-07-04T16:08:32,047 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration2D.c -o build/temp.linux-armv7l-cpython-39/dadi/integration2D.o 2024-07-04T16:08:32,481 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration3D.c -o build/temp.linux-armv7l-cpython-39/dadi/integration3D.o 2024-07-04T16:08:33,198 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration4D.c -o build/temp.linux-armv7l-cpython-39/dadi/integration4D.o 2024-07-04T16:08:33,977 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration5D.c -o build/temp.linux-armv7l-cpython-39/dadi/integration5D.o 2024-07-04T16:08:35,094 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration_c.c -o build/temp.linux-armv7l-cpython-39/dadi/integration_c.o 2024-07-04T16:08:35,411 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:08:35,412 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:08:35,412 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:08:35,412 from dadi/integration_c.c:1252: 2024-07-04T16:08:35,412 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:08:35,412 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:08:35,412 | ^~~~~~~ 2024-07-04T16:08:51,705 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/integration_shared.c -o build/temp.linux-armv7l-cpython-39/dadi/integration_shared.o 2024-07-04T16:08:51,991 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/tridiag.c -o build/temp.linux-armv7l-cpython-39/dadi/tridiag.o 2024-07-04T16:08:52,182 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/integration1D.o build/temp.linux-armv7l-cpython-39/dadi/integration2D.o build/temp.linux-armv7l-cpython-39/dadi/integration3D.o build/temp.linux-armv7l-cpython-39/dadi/integration4D.o build/temp.linux-armv7l-cpython-39/dadi/integration5D.o build/temp.linux-armv7l-cpython-39/dadi/integration_c.o build/temp.linux-armv7l-cpython-39/dadi/integration_shared.o build/temp.linux-armv7l-cpython-39/dadi/tridiag.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/integration_c.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:08:52,332 building 'dadi.DFE.PDFs_cython' extension 2024-07-04T16:08:52,333 creating build/temp.linux-armv7l-cpython-39/dadi/DFE 2024-07-04T16:08:52,334 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Idadi/DFE -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/DFE/PDFs_cython.c -o build/temp.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.o 2024-07-04T16:08:52,663 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:08:52,664 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:08:52,664 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:08:52,664 from dadi/DFE/PDFs_cython.c:1245: 2024-07-04T16:08:52,664 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:08:52,664 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:08:52,664 | ^~~~~~~ 2024-07-04T16:08:52,688 In file included from dadi/DFE/PDFs_cython.c:1250: 2024-07-04T16:08:52,688 dadi/DFE/PDFs.c:4: warning: "M_PI" redefined 2024-07-04T16:08:52,688 4 | #define M_PI 3.14159265358979323846264338327950288 2024-07-04T16:08:52,689 | 2024-07-04T16:08:52,689 In file included from /usr/include/python3.9/pyport.h:205, 2024-07-04T16:08:52,689 from /usr/include/python3.9/Python.h:63, 2024-07-04T16:08:52,689 from dadi/DFE/PDFs_cython.c:34: 2024-07-04T16:08:52,689 /usr/include/math.h:1070: note: this is the location of the previous definition 2024-07-04T16:08:52,689 1070 | # define M_PI 3.14159265358979323846 /* pi */ 2024-07-04T16:08:52,690 | 2024-07-04T16:08:56,706 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:08:56,819 building 'dadi.Triallele.transition1' extension 2024-07-04T16:08:56,819 creating build/temp.linux-armv7l-cpython-39/dadi/Triallele 2024-07-04T16:08:56,820 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/Triallele/transition1.c -o build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition1.o 2024-07-04T16:08:57,142 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:08:57,142 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:08:57,142 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:08:57,143 from dadi/Triallele/transition1.c:1240: 2024-07-04T16:08:57,143 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:08:57,143 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:08:57,143 | ^~~~~~~ 2024-07-04T16:09:09,024 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition1.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:09,143 building 'dadi.Triallele.transition2' extension 2024-07-04T16:09:09,144 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/Triallele/transition2.c -o build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition2.o 2024-07-04T16:09:09,473 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:09,473 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:09,473 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:09,473 from dadi/Triallele/transition2.c:1240: 2024-07-04T16:09:09,474 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:09,474 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:09,474 | ^~~~~~~ 2024-07-04T16:09:21,378 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition2.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition2.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:21,502 building 'dadi.Triallele.transition12' extension 2024-07-04T16:09:21,503 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/Triallele/transition12.c -o build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition12.o 2024-07-04T16:09:21,821 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:21,822 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:21,822 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:21,822 from dadi/Triallele/transition12.c:1240: 2024-07-04T16:09:21,822 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:21,822 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:21,822 | ^~~~~~~ 2024-07-04T16:09:28,075 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition12.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition12.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:28,189 building 'dadi.Triallele.transition1D' extension 2024-07-04T16:09:28,190 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/Triallele/transition1D.c -o build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition1D.o 2024-07-04T16:09:28,506 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:28,506 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:28,507 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:28,507 from dadi/Triallele/transition1D.c:1240: 2024-07-04T16:09:28,507 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:28,507 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:28,507 | ^~~~~~~ 2024-07-04T16:09:33,304 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/Triallele/transition1D.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1D.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:33,419 building 'dadi.TwoLocus.projection_genotypes' extension 2024-07-04T16:09:33,420 creating build/temp.linux-armv7l-cpython-39/dadi/TwoLocus 2024-07-04T16:09:33,420 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/projection_genotypes.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.o 2024-07-04T16:09:33,774 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:33,774 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:33,774 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:33,774 from dadi/TwoLocus/projection_genotypes.c:1240: 2024-07-04T16:09:33,775 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:33,775 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:33,775 | ^~~~~~~ 2024-07-04T16:09:40,707 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:40,820 building 'dadi.TwoLocus.surface_interaction' extension 2024-07-04T16:09:40,821 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/surface_interaction.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.o 2024-07-04T16:09:41,138 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:41,138 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:41,139 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:41,139 from dadi/TwoLocus/surface_interaction.c:1240: 2024-07-04T16:09:41,139 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:41,139 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:41,139 | ^~~~~~~ 2024-07-04T16:09:47,904 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:09:48,018 building 'dadi.TwoLocus.transition1' extension 2024-07-04T16:09:48,019 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition1.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.o 2024-07-04T16:09:48,337 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:09:48,337 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:09:48,337 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:09:48,338 from dadi/TwoLocus/transition1.c:1240: 2024-07-04T16:09:48,338 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:09:48,338 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:09:48,338 | ^~~~~~~ 2024-07-04T16:10:00,808 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:00,933 building 'dadi.TwoLocus.transition2' extension 2024-07-04T16:10:00,934 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition2.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.o 2024-07-04T16:10:01,254 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:01,255 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:01,255 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:01,255 from dadi/TwoLocus/transition2.c:1240: 2024-07-04T16:10:01,255 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:01,255 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:01,256 | ^~~~~~~ 2024-07-04T16:10:13,668 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:13,786 building 'dadi.TwoLocus.transition3' extension 2024-07-04T16:10:13,787 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition3.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.o 2024-07-04T16:10:14,112 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:14,112 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:14,112 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:14,112 from dadi/TwoLocus/transition3.c:1240: 2024-07-04T16:10:14,113 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:14,113 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:14,113 | ^~~~~~~ 2024-07-04T16:10:26,522 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:26,642 building 'dadi.TwoLocus.transition12' extension 2024-07-04T16:10:26,643 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition12.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.o 2024-07-04T16:10:26,973 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:26,973 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:26,973 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:26,974 from dadi/TwoLocus/transition12.c:1240: 2024-07-04T16:10:26,974 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:26,974 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:26,974 | ^~~~~~~ 2024-07-04T16:10:33,678 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:33,796 building 'dadi.TwoLocus.transition13' extension 2024-07-04T16:10:33,797 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition13.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.o 2024-07-04T16:10:34,125 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:34,125 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:34,125 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:34,125 from dadi/TwoLocus/transition13.c:1240: 2024-07-04T16:10:34,125 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:34,126 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:34,126 | ^~~~~~~ 2024-07-04T16:10:40,976 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:41,093 building 'dadi.TwoLocus.transition23' extension 2024-07-04T16:10:41,094 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition23.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.o 2024-07-04T16:10:41,443 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:41,444 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:41,444 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:41,444 from dadi/TwoLocus/transition23.c:1240: 2024-07-04T16:10:41,444 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:41,444 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:41,444 | ^~~~~~~ 2024-07-04T16:10:48,193 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:48,313 building 'dadi.TwoLocus.transition1D' extension 2024-07-04T16:10:48,314 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c dadi/TwoLocus/transition1D.c -o build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.o 2024-07-04T16:10:48,634 In file included from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909, 2024-07-04T16:10:48,635 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12, 2024-07-04T16:10:48,635 from /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5, 2024-07-04T16:10:48,635 from dadi/TwoLocus/transition1D.c:1240: 2024-07-04T16:10:48,635 /tmp/pip-build-env-k0i9c1of/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-07-04T16:10:48,635 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-07-04T16:10:48,635 | ^~~~~~~ 2024-07-04T16:10:54,064 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.cpython-39-arm-linux-gnueabihf.so 2024-07-04T16:10:54,187 installing to build/bdist.linux-armv7l/wheel 2024-07-04T16:10:54,187 running install 2024-07-04T16:10:54,218 running install_lib 2024-07-04T16:10:54,228 creating build/bdist.linux-armv7l 2024-07-04T16:10:54,229 creating build/bdist.linux-armv7l/wheel 2024-07-04T16:10:54,231 creating build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,233 creating build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T16:10:54,234 copying build/lib.linux-armv7l-cpython-39/dadi/Demes/Demes.py -> build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T16:10:54,237 copying build/lib.linux-armv7l-cpython-39/dadi/Demes/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Demes 2024-07-04T16:10:54,240 creating build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,241 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/TriSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,244 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/integration.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,247 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,250 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,252 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,255 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition2.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,278 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition2.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,292 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition12.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,305 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,317 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1D.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,319 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,321 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1D.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,328 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1D.c -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,339 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition2.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,341 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,351 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition1.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,352 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition12.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,361 copying build/lib.linux-armv7l-cpython-39/dadi/Triallele/transition12.pyx -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2024-07-04T16:10:54,362 copying build/lib.linux-armv7l-cpython-39/dadi/NLopt_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,365 creating build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,366 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.c -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,375 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/Cache2D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,377 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,379 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/LICENSE -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,381 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs.c -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,382 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,385 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/Vourlaki2022.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,387 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,388 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/Cache1D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,390 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.pyx -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,392 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs.pyf -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,394 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/PDFs_cython.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,401 copying build/lib.linux-armv7l-cpython-39/dadi/DFE/DemogSelModels.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2024-07-04T16:10:54,404 copying build/lib.linux-armv7l-cpython-39/dadi/__init__.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,406 copying build/lib.linux-armv7l-cpython-39/dadi/integration_cython.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,408 copying build/lib.linux-armv7l-cpython-39/dadi/integration1D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,409 copying build/lib.linux-armv7l-cpython-39/dadi/Inference.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,413 copying build/lib.linux-armv7l-cpython-39/dadi/integration_c.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,433 copying build/lib.linux-armv7l-cpython-39/dadi/tridiag.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,434 copying build/lib.linux-armv7l-cpython-39/dadi/Demographics3D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,436 copying build/lib.linux-armv7l-cpython-39/dadi/integration_c.pyx -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,439 copying build/lib.linux-armv7l-cpython-39/dadi/Integration.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,442 copying build/lib.linux-armv7l-cpython-39/dadi/Demographics2D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,444 copying build/lib.linux-armv7l-cpython-39/dadi/Misc.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,447 copying build/lib.linux-armv7l-cpython-39/dadi/integration5D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,449 copying build/lib.linux-armv7l-cpython-39/dadi/PhiManip.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,452 copying build/lib.linux-armv7l-cpython-39/dadi/Demographics1D.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,454 copying build/lib.linux-armv7l-cpython-39/dadi/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,457 copying build/lib.linux-armv7l-cpython-39/dadi/tridiag_cython.pyx -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,458 copying build/lib.linux-armv7l-cpython-39/dadi/integration2D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,460 copying build/lib.linux-armv7l-cpython-39/dadi/Godambe.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,463 copying build/lib.linux-armv7l-cpython-39/dadi/tridiag_cython.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,474 copying build/lib.linux-armv7l-cpython-39/dadi/Spectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,478 copying build/lib.linux-armv7l-cpython-39/dadi/integration_c.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,498 copying build/lib.linux-armv7l-cpython-39/dadi/integration_shared.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,499 copying build/lib.linux-armv7l-cpython-39/dadi/Numerics.py -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,502 creating build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T16:10:54,503 copying build/lib.linux-armv7l-cpython-39/dadi/PortikModels/LICENSE -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T16:10:54,506 copying build/lib.linux-armv7l-cpython-39/dadi/PortikModels/portik_models_3d.py -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T16:10:54,509 copying build/lib.linux-armv7l-cpython-39/dadi/PortikModels/portik_models_2d.py -> build/bdist.linux-armv7l/wheel/dadi/PortikModels 2024-07-04T16:10:54,511 copying build/lib.linux-armv7l-cpython-39/dadi/tridiag_cython.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,517 copying build/lib.linux-armv7l-cpython-39/dadi/integration4D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,519 copying build/lib.linux-armv7l-cpython-39/dadi/integration3D.c -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,521 copying build/lib.linux-armv7l-cpython-39/dadi/tridiag.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,524 creating build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,525 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/integration.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,527 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,529 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,530 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,534 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,545 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,558 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,572 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,586 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,600 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,617 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,619 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,631 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,643 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,653 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/inference.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,655 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,669 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,677 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,679 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,686 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1D.c -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,696 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/TLSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,699 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/surface_interaction.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,700 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition2.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,702 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,704 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,716 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition1.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,718 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,727 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,738 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition12.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,740 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,747 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition23.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,749 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/projection_genotypes.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,757 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition3.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,760 copying build/lib.linux-armv7l-cpython-39/dadi/TwoLocus/transition13.pyx -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2024-07-04T16:10:54,762 creating build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,763 copying build/lib.linux-armv7l-cpython-39/dadi/cuda/kernels.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,766 copying build/lib.linux-armv7l-cpython-39/dadi/cuda/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,768 copying build/lib.linux-armv7l-cpython-39/dadi/cuda/Integration.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,771 copying build/lib.linux-armv7l-cpython-39/dadi/cuda/cusparse.py -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,773 copying build/lib.linux-armv7l-cpython-39/dadi/cuda/kernels.cu -> build/bdist.linux-armv7l/wheel/dadi/cuda 2024-07-04T16:10:54,775 copying build/lib.linux-armv7l-cpython-39/dadi/integration_shared.h -> build/bdist.linux-armv7l/wheel/dadi 2024-07-04T16:10:54,777 running install_egg_info 2024-07-04T16:10:54,784 Copying dadi.egg-info to build/bdist.linux-armv7l/wheel/dadi-2.3.5-py3.9.egg-info 2024-07-04T16:10:54,795 running install_scripts 2024-07-04T16:10:54,839 creating build/bdist.linux-armv7l/wheel/dadi-2.3.5.dist-info/WHEEL 2024-07-04T16:10:54,841 creating '/tmp/pip-wheel-c1q391e4/.tmp-ylron68r/dadi-2.3.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-04T16:10:54,844 adding 'dadi/Demographics1D.py' 2024-07-04T16:10:54,846 adding 'dadi/Demographics2D.py' 2024-07-04T16:10:54,848 adding 'dadi/Demographics3D.py' 2024-07-04T16:10:54,850 adding 'dadi/Godambe.py' 2024-07-04T16:10:54,855 adding 'dadi/Inference.py' 2024-07-04T16:10:54,861 adding 'dadi/Integration.py' 2024-07-04T16:10:54,866 adding 'dadi/Misc.py' 2024-07-04T16:10:54,868 adding 'dadi/NLopt_mod.py' 2024-07-04T16:10:54,871 adding 'dadi/Numerics.py' 2024-07-04T16:10:54,875 adding 'dadi/PhiManip.py' 2024-07-04T16:10:54,879 adding 'dadi/Plotting.py' 2024-07-04T16:10:54,891 adding 'dadi/Spectrum_mod.py' 2024-07-04T16:10:54,893 adding 'dadi/__init__.py' 2024-07-04T16:10:54,894 adding 'dadi/integration1D.c' 2024-07-04T16:10:54,896 adding 'dadi/integration2D.c' 2024-07-04T16:10:54,897 adding 'dadi/integration3D.c' 2024-07-04T16:10:54,899 adding 'dadi/integration4D.c' 2024-07-04T16:10:54,901 adding 'dadi/integration5D.c' 2024-07-04T16:10:54,946 adding 'dadi/integration_c.c' 2024-07-04T16:10:55,116 adding 'dadi/integration_c.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,122 adding 'dadi/integration_c.pyx' 2024-07-04T16:10:55,124 adding 'dadi/integration_cython.h' 2024-07-04T16:10:55,125 adding 'dadi/integration_shared.c' 2024-07-04T16:10:55,127 adding 'dadi/integration_shared.h' 2024-07-04T16:10:55,128 adding 'dadi/tridiag.c' 2024-07-04T16:10:55,129 adding 'dadi/tridiag.h' 2024-07-04T16:10:55,161 adding 'dadi/tridiag_cython.c' 2024-07-04T16:10:55,202 adding 'dadi/tridiag_cython.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,205 adding 'dadi/tridiag_cython.pyx' 2024-07-04T16:10:55,207 adding 'dadi/DFE/Cache1D_mod.py' 2024-07-04T16:10:55,210 adding 'dadi/DFE/Cache2D_mod.py' 2024-07-04T16:10:55,212 adding 'dadi/DFE/DemogSelModels.py' 2024-07-04T16:10:55,213 adding 'dadi/DFE/LICENSE' 2024-07-04T16:10:55,215 adding 'dadi/DFE/PDFs.c' 2024-07-04T16:10:55,216 adding 'dadi/DFE/PDFs.py' 2024-07-04T16:10:55,217 adding 'dadi/DFE/PDFs.pyf' 2024-07-04T16:10:55,252 adding 'dadi/DFE/PDFs_cython.c' 2024-07-04T16:10:55,308 adding 'dadi/DFE/PDFs_cython.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,310 adding 'dadi/DFE/PDFs_cython.pyx' 2024-07-04T16:10:55,312 adding 'dadi/DFE/Plotting.py' 2024-07-04T16:10:55,314 adding 'dadi/DFE/Vourlaki2022.py' 2024-07-04T16:10:55,315 adding 'dadi/DFE/__init__.py' 2024-07-04T16:10:55,319 adding 'dadi/Demes/Demes.py' 2024-07-04T16:10:55,320 adding 'dadi/Demes/__init__.py' 2024-07-04T16:10:55,322 adding 'dadi/PortikModels/LICENSE' 2024-07-04T16:10:55,325 adding 'dadi/PortikModels/portik_models_2d.py' 2024-07-04T16:10:55,328 adding 'dadi/PortikModels/portik_models_3d.py' 2024-07-04T16:10:55,332 adding 'dadi/Triallele/TriSpectrum_mod.py' 2024-07-04T16:10:55,333 adding 'dadi/Triallele/__init__.py' 2024-07-04T16:10:55,335 adding 'dadi/Triallele/demographics.py' 2024-07-04T16:10:55,336 adding 'dadi/Triallele/integration.py' 2024-07-04T16:10:55,340 adding 'dadi/Triallele/numerics.py' 2024-07-04T16:10:55,341 adding 'dadi/Triallele/plotting.py' 2024-07-04T16:10:55,388 adding 'dadi/Triallele/transition1.c' 2024-07-04T16:10:55,496 adding 'dadi/Triallele/transition1.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,501 adding 'dadi/Triallele/transition1.pyx' 2024-07-04T16:10:55,542 adding 'dadi/Triallele/transition12.c' 2024-07-04T16:10:55,616 adding 'dadi/Triallele/transition12.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,620 adding 'dadi/Triallele/transition12.pyx' 2024-07-04T16:10:55,657 adding 'dadi/Triallele/transition1D.c' 2024-07-04T16:10:55,716 adding 'dadi/Triallele/transition1D.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,719 adding 'dadi/Triallele/transition1D.pyx' 2024-07-04T16:10:55,766 adding 'dadi/Triallele/transition2.c' 2024-07-04T16:10:55,873 adding 'dadi/Triallele/transition2.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:55,877 adding 'dadi/Triallele/transition2.pyx' 2024-07-04T16:10:55,881 adding 'dadi/TwoLocus/TLSpectrum_mod.py' 2024-07-04T16:10:55,882 adding 'dadi/TwoLocus/__init__.py' 2024-07-04T16:10:55,884 adding 'dadi/TwoLocus/demographics.py' 2024-07-04T16:10:55,886 adding 'dadi/TwoLocus/inference.py' 2024-07-04T16:10:55,887 adding 'dadi/TwoLocus/integration.py' 2024-07-04T16:10:55,894 adding 'dadi/TwoLocus/numerics.py' 2024-07-04T16:10:55,896 adding 'dadi/TwoLocus/plotting.py' 2024-07-04T16:10:55,932 adding 'dadi/TwoLocus/projection_genotypes.c' 2024-07-04T16:10:56,000 adding 'dadi/TwoLocus/projection_genotypes.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,003 adding 'dadi/TwoLocus/projection_genotypes.pyx' 2024-07-04T16:10:56,042 adding 'dadi/TwoLocus/surface_interaction.c' 2024-07-04T16:10:56,109 adding 'dadi/TwoLocus/surface_interaction.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,113 adding 'dadi/TwoLocus/surface_interaction.pyx' 2024-07-04T16:10:56,162 adding 'dadi/TwoLocus/transition1.c' 2024-07-04T16:10:56,271 adding 'dadi/TwoLocus/transition1.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,276 adding 'dadi/TwoLocus/transition1.pyx' 2024-07-04T16:10:56,318 adding 'dadi/TwoLocus/transition12.c' 2024-07-04T16:10:56,392 adding 'dadi/TwoLocus/transition12.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,396 adding 'dadi/TwoLocus/transition12.pyx' 2024-07-04T16:10:56,436 adding 'dadi/TwoLocus/transition13.c' 2024-07-04T16:10:56,513 adding 'dadi/TwoLocus/transition13.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,516 adding 'dadi/TwoLocus/transition13.pyx' 2024-07-04T16:10:56,554 adding 'dadi/TwoLocus/transition1D.c' 2024-07-04T16:10:56,617 adding 'dadi/TwoLocus/transition1D.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,620 adding 'dadi/TwoLocus/transition1D.pyx' 2024-07-04T16:10:56,669 adding 'dadi/TwoLocus/transition2.c' 2024-07-04T16:10:56,776 adding 'dadi/TwoLocus/transition2.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,780 adding 'dadi/TwoLocus/transition2.pyx' 2024-07-04T16:10:56,821 adding 'dadi/TwoLocus/transition23.c' 2024-07-04T16:10:56,898 adding 'dadi/TwoLocus/transition23.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:56,901 adding 'dadi/TwoLocus/transition23.pyx' 2024-07-04T16:10:56,949 adding 'dadi/TwoLocus/transition3.c' 2024-07-04T16:10:57,053 adding 'dadi/TwoLocus/transition3.cpython-39-arm-linux-gnueabihf.so' 2024-07-04T16:10:57,058 adding 'dadi/TwoLocus/transition3.pyx' 2024-07-04T16:10:57,062 adding 'dadi/cuda/Integration.py' 2024-07-04T16:10:57,063 adding 'dadi/cuda/__init__.py' 2024-07-04T16:10:57,065 adding 'dadi/cuda/cusparse.py' 2024-07-04T16:10:57,067 adding 'dadi/cuda/kernels.cu' 2024-07-04T16:10:57,068 adding 'dadi/cuda/kernels.py' 2024-07-04T16:10:57,070 adding 'dadi-2.3.5.dist-info/LICENSE.txt' 2024-07-04T16:10:57,072 adding 'dadi-2.3.5.dist-info/METADATA' 2024-07-04T16:10:57,072 adding 'dadi-2.3.5.dist-info/WHEEL' 2024-07-04T16:10:57,073 adding 'dadi-2.3.5.dist-info/top_level.txt' 2024-07-04T16:10:57,075 adding 'dadi-2.3.5.dist-info/RECORD' 2024-07-04T16:10:57,117 removing build/bdist.linux-armv7l/wheel 2024-07-04T16:10:57,321 Building wheel for dadi (pyproject.toml): finished with status 'done' 2024-07-04T16:10:57,406 Created wheel for dadi: filename=dadi-2.3.5-cp39-cp39-linux_armv7l.whl size=3824317 sha256=c4dc82b6fe9cbdc73e45025a938f7adc47254c5d40c9f042e85859fbe2554753 2024-07-04T16:10:57,407 Stored in directory: /tmp/pip-ephem-wheel-cache-yvqwyds8/wheels/22/20/19/129a03cd2c2d6c7178d08fc9d452a07231d592e389a162845c 2024-07-04T16:10:57,423 Successfully built dadi 2024-07-04T16:10:57,516 Removed build tracker: '/tmp/pip-build-tracker-qsrje8ct'