2024-07-05T23:33:06,708 Created temporary directory: /tmp/pip-build-tracker-2o8lp8ec 2024-07-05T23:33:06,709 Initialized build tracking at /tmp/pip-build-tracker-2o8lp8ec 2024-07-05T23:33:06,709 Created build tracker: /tmp/pip-build-tracker-2o8lp8ec 2024-07-05T23:33:06,710 Entered build tracker: /tmp/pip-build-tracker-2o8lp8ec 2024-07-05T23:33:06,711 Created temporary directory: /tmp/pip-wheel-yhhpgetm 2024-07-05T23:33:06,714 Created temporary directory: /tmp/pip-ephem-wheel-cache-_9amf8yj 2024-07-05T23:33:06,738 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-05T23:33:06,741 2 location(s) to search for versions of tangermeme: 2024-07-05T23:33:06,741 * https://pypi.org/simple/tangermeme/ 2024-07-05T23:33:06,741 * https://www.piwheels.org/simple/tangermeme/ 2024-07-05T23:33:06,742 Fetching project page and analyzing links: https://pypi.org/simple/tangermeme/ 2024-07-05T23:33:06,743 Getting page https://pypi.org/simple/tangermeme/ 2024-07-05T23:33:06,744 Found index url https://pypi.org/simple/ 2024-07-05T23:33:06,879 Fetched page https://pypi.org/simple/tangermeme/ as application/vnd.pypi.simple.v1+json 2024-07-05T23:33:06,883 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/a9/e0/853e8caeb0d5f4b8fc911ef2757748fff62b26f2ca856819f98d89fd6b5d/tangermeme-0.0.1-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,883 Found link https://files.pythonhosted.org/packages/61/41/c9434c381d7fea99951710f47cc3751dcb10002c90cfaf60d3187b7e6665/tangermeme-0.0.1.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.0.1 2024-07-05T23:33:06,884 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/8f/21/8567311fe56325b390a914dc5d41efd9646e2277857d10c50338c740a7ce/tangermeme-0.1.0rc0-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,884 Found link https://files.pythonhosted.org/packages/05/7a/373121f7e2cdb51984d1c0c24ea4ed2d9328846e863ad517ed07ead9a88f/tangermeme-0.1.0rc0.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.1.0rc0 2024-07-05T23:33:06,885 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/7f/5a/9a9b74932c857fce18dfdeea136beccd406a29bd7d8c4b31ed26db4cde32/tangermeme-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,886 Found link https://files.pythonhosted.org/packages/9f/f1/5253f9a39e1835bd6dc7ef5adc3c32cbb825b3ef47b84edc8caeee500edb/tangermeme-0.1.0.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.1.0 2024-07-05T23:33:06,886 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/85/98/8b03de434fb8d1de09875fb9c4e49b67f54d4f819b1932af6e81c50ff58d/tangermeme-0.2.0-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,887 Found link https://files.pythonhosted.org/packages/4e/7c/b5b0c87ab75d6da3a0f64868a528224386672c478a251ee755d9aa5ea092/tangermeme-0.2.0.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.2.0 2024-07-05T23:33:06,888 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/c8/f2/683780a3928ca9487fad8436ff74414a1487a6a59c201e8a5860868613c8/tangermeme-0.2.1-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,888 Found link https://files.pythonhosted.org/packages/9a/f2/6f5dcd6b0e445e3a4e6959ba63a9dcbfa6721d0b04ef22d1852ff07635c5/tangermeme-0.2.1.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.2.1 2024-07-05T23:33:06,889 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/af/06/280770a1f6b00b590a29ff0f04da3182000f5b9ab782508b49156ba1beeb/tangermeme-0.2.2-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,889 Found link https://files.pythonhosted.org/packages/77/5b/0ef17f29406af541b3244ff6fd3c1da629b141236b3a73877f7b30de429c/tangermeme-0.2.2.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.2.2 2024-07-05T23:33:06,890 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/6a/df/da3fcc7597bb035b223751c8f4163745a33640f1e5e85e8192cecacfe07c/tangermeme-0.2.3-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-07-05T23:33:06,891 Found link https://files.pythonhosted.org/packages/d2/59/ddc1c3bafc12f487033dc139072ecba655f377e04358d2645af3b1f66de6/tangermeme-0.2.3.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.2.3 2024-07-05T23:33:06,892 Fetching project page and analyzing links: https://www.piwheels.org/simple/tangermeme/ 2024-07-05T23:33:06,892 Getting page https://www.piwheels.org/simple/tangermeme/ 2024-07-05T23:33:06,893 Found index url https://www.piwheels.org/simple/ 2024-07-05T23:33:07,041 Fetched page https://www.piwheels.org/simple/tangermeme/ as text/html 2024-07-05T23:33:07,043 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.2.1-py3-none-any.whl#sha256=8296bc7ed6b7c99718b5acbe75e77f99da98d3e680adef43875abdac677bb38c (from https://www.piwheels.org/simple/tangermeme/) 2024-07-05T23:33:07,044 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.2.0-py3-none-any.whl#sha256=cb8019a48b97b8ce5e24371e7413c6c6bfe3ee1f3f114bd0b40b3fbcbf35f945 (from https://www.piwheels.org/simple/tangermeme/) 2024-07-05T23:33:07,044 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.1.0-py3-none-any.whl#sha256=6c23d1bf94f5b24ed50311d61ddb1e4c49b9ba9d5e9bb8a22c4679df9711b983 (from https://www.piwheels.org/simple/tangermeme/) 2024-07-05T23:33:07,045 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.1.0rc0-py3-none-any.whl#sha256=e6dad2c5e1551460aff817aa6a1fd7d8b62976244d57b6219301623bb3b0f7bb (from https://www.piwheels.org/simple/tangermeme/) 2024-07-05T23:33:07,045 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.0.1-py3-none-any.whl#sha256=623e295dad1d60f7e2d1b6a311127178008994cb6b727cfc2fb7c7bf2511c18b (from https://www.piwheels.org/simple/tangermeme/) 2024-07-05T23:33:07,046 Skipping link: not a file: https://www.piwheels.org/simple/tangermeme/ 2024-07-05T23:33:07,047 Skipping link: not a file: https://pypi.org/simple/tangermeme/ 2024-07-05T23:33:07,068 Given no hashes to check 1 links for project 'tangermeme': discarding no candidates 2024-07-05T23:33:07,087 Collecting tangermeme==0.2.3 2024-07-05T23:33:07,090 Created temporary directory: /tmp/pip-unpack-2p_coy4c 2024-07-05T23:33:07,305 Downloading tangermeme-0.2.3.tar.gz (88 kB) 2024-07-05T23:33:07,461 Added tangermeme==0.2.3 from https://files.pythonhosted.org/packages/d2/59/ddc1c3bafc12f487033dc139072ecba655f377e04358d2645af3b1f66de6/tangermeme-0.2.3.tar.gz to build tracker '/tmp/pip-build-tracker-2o8lp8ec' 2024-07-05T23:33:07,463 Running setup.py (path:/tmp/pip-wheel-yhhpgetm/tangermeme_74d7a8be94844c86a581e7d3eccd5687/setup.py) egg_info for package tangermeme 2024-07-05T23:33:07,464 Created temporary directory: /tmp/pip-pip-egg-info-cag5x9wa 2024-07-05T23:33:07,465 Preparing metadata (setup.py): started 2024-07-05T23:33:07,466 Running command python setup.py egg_info 2024-07-05T23:33:08,377 running egg_info 2024-07-05T23:33:08,378 creating /tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info 2024-07-05T23:33:08,404 writing /tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/PKG-INFO 2024-07-05T23:33:08,408 writing dependency_links to /tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/dependency_links.txt 2024-07-05T23:33:08,410 writing requirements to /tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/requires.txt 2024-07-05T23:33:08,411 writing top-level names to /tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/top_level.txt 2024-07-05T23:33:08,413 writing manifest file '/tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/SOURCES.txt' 2024-07-05T23:33:08,499 reading manifest file '/tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/SOURCES.txt' 2024-07-05T23:33:08,501 adding license file 'LICENSE' 2024-07-05T23:33:08,503 writing manifest file '/tmp/pip-pip-egg-info-cag5x9wa/tangermeme.egg-info/SOURCES.txt' 2024-07-05T23:33:08,611 Preparing metadata (setup.py): finished with status 'done' 2024-07-05T23:33:08,615 Source in /tmp/pip-wheel-yhhpgetm/tangermeme_74d7a8be94844c86a581e7d3eccd5687 has version 0.2.3, which satisfies requirement tangermeme==0.2.3 from https://files.pythonhosted.org/packages/d2/59/ddc1c3bafc12f487033dc139072ecba655f377e04358d2645af3b1f66de6/tangermeme-0.2.3.tar.gz 2024-07-05T23:33:08,616 Removed tangermeme==0.2.3 from https://files.pythonhosted.org/packages/d2/59/ddc1c3bafc12f487033dc139072ecba655f377e04358d2645af3b1f66de6/tangermeme-0.2.3.tar.gz from build tracker '/tmp/pip-build-tracker-2o8lp8ec' 2024-07-05T23:33:08,620 Created temporary directory: /tmp/pip-unpack-8uwpmhjf 2024-07-05T23:33:08,621 Created temporary directory: /tmp/pip-unpack-sdzf9h6w 2024-07-05T23:33:08,635 Building wheels for collected packages: tangermeme 2024-07-05T23:33:08,639 Created temporary directory: /tmp/pip-wheel-jnakwvob 2024-07-05T23:33:08,640 Building wheel for tangermeme (setup.py): started 2024-07-05T23:33:08,641 Destination directory: /tmp/pip-wheel-jnakwvob 2024-07-05T23:33:08,641 Running command python setup.py bdist_wheel 2024-07-05T23:33:09,517 running bdist_wheel 2024-07-05T23:33:09,653 running build 2024-07-05T23:33:09,653 running build_py 2024-07-05T23:33:09,683 creating build 2024-07-05T23:33:09,684 creating build/lib 2024-07-05T23:33:09,685 creating build/lib/tangermeme 2024-07-05T23:33:09,686 copying tangermeme/product.py -> build/lib/tangermeme 2024-07-05T23:33:09,688 copying tangermeme/predict.py -> build/lib/tangermeme 2024-07-05T23:33:09,690 copying tangermeme/match.py -> build/lib/tangermeme 2024-07-05T23:33:09,692 copying tangermeme/space.py -> build/lib/tangermeme 2024-07-05T23:33:09,694 copying tangermeme/plot.py -> build/lib/tangermeme 2024-07-05T23:33:09,697 copying tangermeme/design.py -> build/lib/tangermeme 2024-07-05T23:33:09,699 copying tangermeme/io.py -> build/lib/tangermeme 2024-07-05T23:33:09,701 copying tangermeme/seqlet.py -> build/lib/tangermeme 2024-07-05T23:33:09,703 copying tangermeme/ablate.py -> build/lib/tangermeme 2024-07-05T23:33:09,706 copying tangermeme/__init__.py -> build/lib/tangermeme 2024-07-05T23:33:09,707 copying tangermeme/deep_lift_shap.py -> build/lib/tangermeme 2024-07-05T23:33:09,710 copying tangermeme/utils.py -> build/lib/tangermeme 2024-07-05T23:33:09,712 copying tangermeme/variant_effect.py -> build/lib/tangermeme 2024-07-05T23:33:09,715 copying tangermeme/kmers.py -> build/lib/tangermeme 2024-07-05T23:33:09,717 copying tangermeme/marginalize.py -> build/lib/tangermeme 2024-07-05T23:33:09,719 copying tangermeme/ersatz.py -> build/lib/tangermeme 2024-07-05T23:33:09,721 copying tangermeme/ism.py -> build/lib/tangermeme 2024-07-05T23:33:09,724 creating build/lib/tangermeme/tools 2024-07-05T23:33:09,725 copying tangermeme/tools/fimo.py -> build/lib/tangermeme/tools 2024-07-05T23:33:09,727 copying tangermeme/tools/__init__.py -> build/lib/tangermeme/tools 2024-07-05T23:33:09,729 copying tangermeme/tools/tomtom.py -> build/lib/tangermeme/tools 2024-07-05T23:33:09,760 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-07-05T23:33:09,760 !! 2024-07-05T23:33:09,762 ******************************************************************************** 2024-07-05T23:33:09,762 Please avoid running ``setup.py`` directly. 2024-07-05T23:33:09,763 Instead, use pypa/build, pypa/installer or other 2024-07-05T23:33:09,764 standards-based tools. 2024-07-05T23:33:09,765 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-07-05T23:33:09,765 ******************************************************************************** 2024-07-05T23:33:09,767 !! 2024-07-05T23:33:09,767 self.initialize_options() 2024-07-05T23:33:09,788 installing to build/bdist.linux-armv7l/wheel 2024-07-05T23:33:09,789 running install 2024-07-05T23:33:09,813 running install_lib 2024-07-05T23:33:09,839 creating build/bdist.linux-armv7l 2024-07-05T23:33:09,840 creating build/bdist.linux-armv7l/wheel 2024-07-05T23:33:09,841 creating build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,842 copying build/lib/tangermeme/product.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,845 copying build/lib/tangermeme/predict.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,846 copying build/lib/tangermeme/match.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,849 copying build/lib/tangermeme/space.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,851 creating build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-07-05T23:33:09,852 copying build/lib/tangermeme/tools/fimo.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-07-05T23:33:09,855 copying build/lib/tangermeme/tools/__init__.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-07-05T23:33:09,856 copying build/lib/tangermeme/tools/tomtom.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-07-05T23:33:09,858 copying build/lib/tangermeme/plot.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,860 copying build/lib/tangermeme/design.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,862 copying build/lib/tangermeme/io.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,865 copying build/lib/tangermeme/seqlet.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,867 copying build/lib/tangermeme/ablate.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,869 copying build/lib/tangermeme/__init__.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,871 copying build/lib/tangermeme/deep_lift_shap.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,874 copying build/lib/tangermeme/utils.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,876 copying build/lib/tangermeme/variant_effect.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,878 copying build/lib/tangermeme/kmers.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,880 copying build/lib/tangermeme/marginalize.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,883 copying build/lib/tangermeme/ersatz.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,885 copying build/lib/tangermeme/ism.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-07-05T23:33:09,887 running install_egg_info 2024-07-05T23:33:09,922 running egg_info 2024-07-05T23:33:09,948 writing tangermeme.egg-info/PKG-INFO 2024-07-05T23:33:09,951 writing dependency_links to tangermeme.egg-info/dependency_links.txt 2024-07-05T23:33:09,953 writing requirements to tangermeme.egg-info/requires.txt 2024-07-05T23:33:09,954 writing top-level names to tangermeme.egg-info/top_level.txt 2024-07-05T23:33:09,985 reading manifest file 'tangermeme.egg-info/SOURCES.txt' 2024-07-05T23:33:09,988 adding license file 'LICENSE' 2024-07-05T23:33:09,991 writing manifest file 'tangermeme.egg-info/SOURCES.txt' 2024-07-05T23:33:09,992 Copying tangermeme.egg-info to build/bdist.linux-armv7l/wheel/tangermeme-0.2.3-py3.11.egg-info 2024-07-05T23:33:10,002 running install_scripts 2024-07-05T23:33:10,016 creating build/bdist.linux-armv7l/wheel/tangermeme-0.2.3.dist-info/WHEEL 2024-07-05T23:33:10,018 creating '/tmp/pip-wheel-jnakwvob/tangermeme-0.2.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-05T23:33:10,021 adding 'tangermeme/__init__.py' 2024-07-05T23:33:10,023 adding 'tangermeme/ablate.py' 2024-07-05T23:33:10,026 adding 'tangermeme/deep_lift_shap.py' 2024-07-05T23:33:10,028 adding 'tangermeme/design.py' 2024-07-05T23:33:10,031 adding 'tangermeme/ersatz.py' 2024-07-05T23:33:10,034 adding 'tangermeme/io.py' 2024-07-05T23:33:10,036 adding 'tangermeme/ism.py' 2024-07-05T23:33:10,038 adding 'tangermeme/kmers.py' 2024-07-05T23:33:10,039 adding 'tangermeme/marginalize.py' 2024-07-05T23:33:10,041 adding 'tangermeme/match.py' 2024-07-05T23:33:10,043 adding 'tangermeme/plot.py' 2024-07-05T23:33:10,045 adding 'tangermeme/predict.py' 2024-07-05T23:33:10,046 adding 'tangermeme/product.py' 2024-07-05T23:33:10,048 adding 'tangermeme/seqlet.py' 2024-07-05T23:33:10,050 adding 'tangermeme/space.py' 2024-07-05T23:33:10,052 adding 'tangermeme/utils.py' 2024-07-05T23:33:10,054 adding 'tangermeme/variant_effect.py' 2024-07-05T23:33:10,056 adding 'tangermeme/tools/__init__.py' 2024-07-05T23:33:10,058 adding 'tangermeme/tools/fimo.py' 2024-07-05T23:33:10,059 adding 'tangermeme/tools/tomtom.py' 2024-07-05T23:33:10,062 adding 'tangermeme-0.2.3.dist-info/LICENSE' 2024-07-05T23:33:10,063 adding 'tangermeme-0.2.3.dist-info/METADATA' 2024-07-05T23:33:10,063 adding 'tangermeme-0.2.3.dist-info/WHEEL' 2024-07-05T23:33:10,064 adding 'tangermeme-0.2.3.dist-info/top_level.txt' 2024-07-05T23:33:10,065 adding 'tangermeme-0.2.3.dist-info/RECORD' 2024-07-05T23:33:10,068 removing build/bdist.linux-armv7l/wheel 2024-07-05T23:33:10,183 Building wheel for tangermeme (setup.py): finished with status 'done' 2024-07-05T23:33:10,187 Created wheel for tangermeme: filename=tangermeme-0.2.3-py3-none-any.whl size=60328 sha256=8c5d2a48fcac393383f6952bb5a447b8683f8063c407d6e5cbd08ad5b960e7f5 2024-07-05T23:33:10,188 Stored in directory: /tmp/pip-ephem-wheel-cache-_9amf8yj/wheels/38/1e/6a/4f68d81e1d2ad58a049d145f5aa242b43ef978ba2ce8d22aa2 2024-07-05T23:33:10,198 Successfully built tangermeme 2024-07-05T23:33:10,203 Removed build tracker: '/tmp/pip-build-tracker-2o8lp8ec'