2024-07-08T02:02:40,087 Created temporary directory: /tmp/pip-build-tracker-016ky9xm
2024-07-08T02:02:40,089 Initialized build tracking at /tmp/pip-build-tracker-016ky9xm
2024-07-08T02:02:40,089 Created build tracker: /tmp/pip-build-tracker-016ky9xm
2024-07-08T02:02:40,089 Entered build tracker: /tmp/pip-build-tracker-016ky9xm
2024-07-08T02:02:40,090 Created temporary directory: /tmp/pip-wheel-b10rtjvj
2024-07-08T02:02:40,094 Created temporary directory: /tmp/pip-ephem-wheel-cache-ds4xyqno
2024-07-08T02:02:40,122 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-08T02:02:40,125 2 location(s) to search for versions of scikit-bio:
2024-07-08T02:02:40,125 * https://pypi.org/simple/scikit-bio/
2024-07-08T02:02:40,125 * https://www.piwheels.org/simple/scikit-bio/
2024-07-08T02:02:40,126 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/
2024-07-08T02:02:40,127 Getting page https://pypi.org/simple/scikit-bio/
2024-07-08T02:02:40,128 Found index url https://pypi.org/simple/
2024-07-08T02:02:40,182 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json
2024-07-08T02:02:40,187   Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0
2024-07-08T02:02:40,187   Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1
2024-07-08T02:02:40,188   Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2
2024-07-08T02:02:40,188   Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3
2024-07-08T02:02:40,188   Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4
2024-07-08T02:02:40,189   Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5
2024-07-08T02:02:40,189   Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0
2024-07-08T02:02:40,189   Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1
2024-07-08T02:02:40,189   Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2
2024-07-08T02:02:40,190   Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3
2024-07-08T02:02:40,190   Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0
2024-07-08T02:02:40,190   Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1
2024-07-08T02:02:40,191   Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2
2024-07-08T02:02:40,191   Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0
2024-07-08T02:02:40,191   Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1
2024-07-08T02:02:40,191   Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2
2024-07-08T02:02:40,192   Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3
2024-07-08T02:02:40,192   Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4
2024-07-08T02:02:40,192   Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5
2024-07-08T02:02:40,192   Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6
2024-07-08T02:02:40,193   Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7
2024-07-08T02:02:40,193   Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8
2024-07-08T02:02:40,193   Found link https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.9
2024-07-08T02:02:40,194   Found link https://files.pythonhosted.org/packages/9d/77/531cf69c99cb398c5abf8545259b88ee256bfdb72e5972bcfdbcb9942751/scikit-bio-0.6.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.6.0
2024-07-08T02:02:40,194   Found link https://files.pythonhosted.org/packages/12/6b/1a01f3df88503d9a11916972f0b0c2aed13d516f159336b4bdcfcd04098a/scikit-bio-0.6.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.6.1
2024-07-08T02:02:40,194   Found link https://files.pythonhosted.org/packages/29/28/07326aa931c67d491d3053e2875b6c8f2904e661d9ab7c2840c3ae6b3780/scikit-bio-0.6.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.6.2
2024-07-08T02:02:40,195 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/
2024-07-08T02:02:40,195 Getting page https://www.piwheels.org/simple/scikit-bio/
2024-07-08T02:02:40,196 Found index url https://www.piwheels.org/simple/
2024-07-08T02:02:40,265 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html
2024-07-08T02:02:40,273   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp311-cp311-linux_armv6l.whl#sha256=7657b22d76cf0c3a508f91d921cbfc5431049f4477456d8b26c9a24a9ebb7190 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,273   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp311-cp311-linux_armv7l.whl#sha256=7657b22d76cf0c3a508f91d921cbfc5431049f4477456d8b26c9a24a9ebb7190 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,273   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=2dfb82a5726354b8f83f298206e3c08373a5c7502bcd2d68eba605d3d7a63398 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,274   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=2dfb82a5726354b8f83f298206e3c08373a5c7502bcd2d68eba605d3d7a63398 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,274   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp39-cp39-linux_armv6l.whl#sha256=e98311cac990697fccc80b97b64ba1e25c17216e95f4ae0608c3c4084a25739d (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,274   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=e98311cac990697fccc80b97b64ba1e25c17216e95f4ae0608c3c4084a25739d (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,274   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp311-cp311-linux_armv6l.whl#sha256=3c11c6aec89d859de926ebf1b4a4fb61ce1bcab28c1762427c042704d7ae0c9e (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,274   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp311-cp311-linux_armv7l.whl#sha256=3c11c6aec89d859de926ebf1b4a4fb61ce1bcab28c1762427c042704d7ae0c9e (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,275   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp37-cp37m-linux_armv6l.whl#sha256=bfbf0fe68e25c3d128af83db7e51b2f3c100f7cdbda1669dcdf1c51c7f18cd74 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,275   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp37-cp37m-linux_armv7l.whl#sha256=bfbf0fe68e25c3d128af83db7e51b2f3c100f7cdbda1669dcdf1c51c7f18cd74 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,275   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp39-cp39-linux_armv6l.whl#sha256=da66a4671abc7db352a7ed3975d364cba1a7adc858a10c82f32d8e6e39d007bd (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,275   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.6.0-cp39-cp39-linux_armv7l.whl#sha256=da66a4671abc7db352a7ed3975d364cba1a7adc858a10c82f32d8e6e39d007bd (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,275   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv6l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,276   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv7l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,276   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv6l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,276   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,276   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp311-cp311-linux_armv6l.whl#sha256=0d10c6c7922db15dcc5640bac5f192fdd8606fa47facd0f34eb648f9c3e049b2 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,276   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp311-cp311-linux_armv7l.whl#sha256=0d10c6c7922db15dcc5640bac5f192fdd8606fa47facd0f34eb648f9c3e049b2 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,277   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,277   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,277   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv6l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,277   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,277   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,278   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,278   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,278   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,278   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,278   Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/)
2024-07-08T02:02:40,279 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/
2024-07-08T02:02:40,279 Skipping link: not a file: https://pypi.org/simple/scikit-bio/
2024-07-08T02:02:40,300 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates
2024-07-08T02:02:40,316 Collecting scikit-bio==0.6.2
2024-07-08T02:02:40,318   Created temporary directory: /tmp/pip-unpack-x3oh3nrh
2024-07-08T02:02:40,363   Downloading scikit-bio-0.6.2.tar.gz (2.7 MB)
2024-07-08T02:02:42,571   Added scikit-bio==0.6.2 from https://files.pythonhosted.org/packages/29/28/07326aa931c67d491d3053e2875b6c8f2904e661d9ab7c2840c3ae6b3780/scikit-bio-0.6.2.tar.gz to build tracker '/tmp/pip-build-tracker-016ky9xm'
2024-07-08T02:02:42,577   Created temporary directory: /tmp/pip-build-env-u0jpmw8_
2024-07-08T02:02:42,587   Installing build dependencies: started
2024-07-08T02:02:42,588   Running command pip subprocess to install build dependencies
2024-07-08T02:02:43,821   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-07-08T02:02:44,336   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-08T02:02:45,824   Collecting setuptools
2024-07-08T02:02:45,864     Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.2.0-py3-none-any.whl (930 kB)
2024-07-08T02:02:46,200   Collecting wheel
2024-07-08T02:02:46,225     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-07-08T02:02:47,292   Collecting numpy
2024-07-08T02:02:47,341     Using cached https://www.piwheels.org/simple/numpy/numpy-2.0.0-cp39-cp39-linux_armv7l.whl (5.8 MB)
2024-07-08T02:02:49,596   Collecting cython
2024-07-08T02:02:49,612     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp39-cp39-linux_armv7l.whl (10.7 MB)
2024-07-08T02:02:51,705   Installing collected packages: wheel, setuptools, numpy, cython
2024-07-08T02:02:51,993     Creating /tmp/pip-build-env-u0jpmw8_/overlay/bin
2024-07-08T02:02:51,995     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/wheel to 755
2024-07-08T02:03:02,446     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/f2py to 755
2024-07-08T02:03:02,448     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/numpy-config to 755
2024-07-08T02:03:05,852     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/cygdb to 755
2024-07-08T02:03:05,855     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/cython to 755
2024-07-08T02:03:05,857     changing mode of /tmp/pip-build-env-u0jpmw8_/overlay/bin/cythonize to 755
2024-07-08T02:03:05,882   Successfully installed cython-3.0.10 numpy-2.0.0 setuptools-70.2.0 wheel-0.43.0

2024-07-08T02:03:06,064   [notice] A new release of pip is available: 24.0 -> 24.1.1
2024-07-08T02:03:06,064   [notice] To update, run: python3 -m pip install --upgrade pip
2024-07-08T02:03:06,535   Installing build dependencies: finished with status 'done'
2024-07-08T02:03:06,545   Getting requirements to build wheel: started
2024-07-08T02:03:06,546   Running command Getting requirements to build wheel
2024-07-08T02:03:09,465   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/metadata/_intersection.pyx
2024-07-08T02:03:09,466     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:10,240   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:10,241     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:12,742   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:12,742     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:14,940   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:14,940     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:15,682   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:15,682     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:17,007   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:17,007   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:17,008   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,849   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,851   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,857   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,861   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,879   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,881   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,888   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,891   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:19,895   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:19,896   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:19,899   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:19,900   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:19,902   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:19,903   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:19,906   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:19,906   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:19,909   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:19,912   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:20,222   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-07-08T02:03:20,223   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:20,223   [3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:20,223   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:20,223   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:20,342   running egg_info
2024-07-08T02:03:20,352   writing scikit_bio.egg-info/PKG-INFO
2024-07-08T02:03:20,356   writing dependency_links to scikit_bio.egg-info/dependency_links.txt
2024-07-08T02:03:20,359   writing requirements to scikit_bio.egg-info/requires.txt
2024-07-08T02:03:20,360   writing top-level names to scikit_bio.egg-info/top_level.txt
2024-07-08T02:03:20,516   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,517   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,517   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,517   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,518   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,518   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,519   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,519   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,519   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,520   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:20,526   reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:03:20,555   reading manifest template 'MANIFEST.in'
2024-07-08T02:03:20,607   no previously-included directories found matching 'doc/build'
2024-07-08T02:03:20,610   no previously-included directories found matching 'doc/source/generated'
2024-07-08T02:03:20,613   no previously-included directories found matching 'web/_build'
2024-07-08T02:03:20,619   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-07-08T02:03:20,626   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-07-08T02:03:20,632   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-07-08T02:03:20,637   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-07-08T02:03:20,643   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-07-08T02:03:20,643   adding license file 'LICENSE.txt'
2024-07-08T02:03:20,702   writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:03:21,592   Getting requirements to build wheel: finished with status 'done'
2024-07-08T02:03:21,596   Created temporary directory: /tmp/pip-modern-metadata-qqzgx5yy
2024-07-08T02:03:21,599   Preparing metadata (pyproject.toml): started
2024-07-08T02:03:21,600   Running command Preparing metadata (pyproject.toml)
2024-07-08T02:03:24,335   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/metadata/_intersection.pyx
2024-07-08T02:03:24,336     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:25,111   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:25,111     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:27,623   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:27,623     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:29,774   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:29,774     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:30,528   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:30,528     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:31,874   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:31,874   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:31,875   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,771   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,774   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,779   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,782   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,801   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,803   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,809   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,812   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:34,815   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:34,816   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:34,818   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:34,819   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:34,821   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:34,822   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:34,824   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:34,825   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:34,827   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:34,829   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:35,140   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-07-08T02:03:35,141   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:35,141   [3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:35,141   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:35,141   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:35,235   running dist_info
2024-07-08T02:03:35,242   creating /tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info
2024-07-08T02:03:35,247   writing /tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/PKG-INFO
2024-07-08T02:03:35,251   writing dependency_links to /tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/dependency_links.txt
2024-07-08T02:03:35,254   writing requirements to /tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/requires.txt
2024-07-08T02:03:35,255   writing top-level names to /tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/top_level.txt
2024-07-08T02:03:35,256   writing manifest file '/tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:03:35,472   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,472   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,472   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,472   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,472   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,473   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,473   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,473   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,473   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,473   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:03:35,479   reading manifest file '/tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:03:35,481   reading manifest template 'MANIFEST.in'
2024-07-08T02:03:35,535   no previously-included directories found matching 'doc/build'
2024-07-08T02:03:35,537   no previously-included directories found matching 'doc/source/generated'
2024-07-08T02:03:35,539   no previously-included directories found matching 'web/_build'
2024-07-08T02:03:35,543   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-07-08T02:03:35,547   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-07-08T02:03:35,551   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-07-08T02:03:35,554   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-07-08T02:03:35,558   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-07-08T02:03:35,558   adding license file 'LICENSE.txt'
2024-07-08T02:03:35,603   writing manifest file '/tmp/pip-modern-metadata-qqzgx5yy/scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:03:35,605   creating '/tmp/pip-modern-metadata-qqzgx5yy/scikit_bio-0.6.2.dist-info'
2024-07-08T02:03:36,548   Preparing metadata (pyproject.toml): finished with status 'done'
2024-07-08T02:03:36,554   Source in /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb has version 0.6.2, which satisfies requirement scikit-bio==0.6.2 from https://files.pythonhosted.org/packages/29/28/07326aa931c67d491d3053e2875b6c8f2904e661d9ab7c2840c3ae6b3780/scikit-bio-0.6.2.tar.gz
2024-07-08T02:03:36,555   Removed scikit-bio==0.6.2 from https://files.pythonhosted.org/packages/29/28/07326aa931c67d491d3053e2875b6c8f2904e661d9ab7c2840c3ae6b3780/scikit-bio-0.6.2.tar.gz from build tracker '/tmp/pip-build-tracker-016ky9xm'
2024-07-08T02:03:36,560 Created temporary directory: /tmp/pip-unpack-ryy6n589
2024-07-08T02:03:36,561 Created temporary directory: /tmp/pip-unpack-tp_zu6o6
2024-07-08T02:03:36,576 Building wheels for collected packages: scikit-bio
2024-07-08T02:03:36,580   Created temporary directory: /tmp/pip-wheel-9oia_hoe
2024-07-08T02:03:36,580   Destination directory: /tmp/pip-wheel-9oia_hoe
2024-07-08T02:03:36,582   Building wheel for scikit-bio (pyproject.toml): started
2024-07-08T02:03:36,583   Running command Building wheel for scikit-bio (pyproject.toml)
2024-07-08T02:03:39,295   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/metadata/_intersection.pyx
2024-07-08T02:03:39,295     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:40,070   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:40,070     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:42,570   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:42,571     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:44,722   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:44,722     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:45,473   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-b10rtjvj/scikit-bio_3ec24615ed1a4c3ca89aecffefee38cb/skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:45,473     tree = Parsing.p_module(s, pxd, full_module_name)
2024-07-08T02:03:46,809   performance hint: skbio/stats/distance/_cutils.pyx:398:5: Exception check on '_dist_euclidean' will always require the GIL to be acquired. Declare '_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:46,810   performance hint: skbio/stats/distance/_cutils.pyx:407:5: Exception check on '_norm_euclidean' will always require the GIL to be acquired. Declare '_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:46,810   performance hint: skbio/stats/distance/_cutils.pyx:414:5: Exception check on '_sum' will always require the GIL to be acquired. Declare '_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,680   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,682   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_0_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_0_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,688   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_0_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,691   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_0_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_0_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,710   performance hint: skbio/stats/distance/_cutils.pyx:350:36: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,712   performance hint: skbio/stats/distance/_cutils.pyx:357:24: Exception check after calling '__pyx_fuse_1_sum' will always require the GIL to be acquired. Declare '__pyx_fuse_1_sum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,718   performance hint: skbio/stats/distance/_cutils.pyx:381:35: Exception check after calling '__pyx_fuse_1_norm_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_norm_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,721   performance hint: skbio/stats/distance/_cutils.pyx:389:34: Exception check after calling '__pyx_fuse_1_dist_euclidean' will always require the GIL to be acquired. Declare '__pyx_fuse_1_dist_euclidean' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2024-07-08T02:03:49,724   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:49,725   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:49,727   warning: skbio/stats/distance/_cutils.pyx:403:15: Use boundscheck(False) for faster access
2024-07-08T02:03:49,728   warning: skbio/stats/distance/_cutils.pyx:403:22: Use boundscheck(False) for faster access
2024-07-08T02:03:49,730   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:49,731   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:49,733   warning: skbio/stats/distance/_cutils.pyx:411:14: Use boundscheck(False) for faster access
2024-07-08T02:03:49,733   warning: skbio/stats/distance/_cutils.pyx:411:21: Use boundscheck(False) for faster access
2024-07-08T02:03:49,736   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:49,738   warning: skbio/stats/distance/_cutils.pyx:418:18: Use boundscheck(False) for faster access
2024-07-08T02:03:50,056   [1/5] Cythonizing skbio/metadata/_intersection.pyx
2024-07-08T02:03:50,056   [2/5] Cythonizing skbio/stats/ordination/_cutils.pyx
2024-07-08T02:03:50,056   [3/5] Cythonizing skbio/alignment/_ssw_wrapper.pyx
2024-07-08T02:03:50,057   [4/5] Cythonizing skbio/diversity/_phylogenetic.pyx
2024-07-08T02:03:50,057   [5/5] Cythonizing skbio/stats/distance/_cutils.pyx
2024-07-08T02:03:50,141   running bdist_wheel
2024-07-08T02:03:50,198   running build
2024-07-08T02:03:50,198   running build_py
2024-07-08T02:03:50,208   creating build
2024-07-08T02:03:50,209   creating build/lib.linux-armv7l-cpython-39
2024-07-08T02:03:50,210   creating build/lib.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:50,211   copying skbio/_base.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:50,213   copying skbio/workflow.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:50,216   copying skbio/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:50,218   copying skbio/test.py -> build/lib.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:50,220   creating build/lib.linux-armv7l-cpython-39/skbio/table
2024-07-08T02:03:50,221   copying skbio/table/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/table
2024-07-08T02:03:50,223   copying skbio/table/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/table
2024-07-08T02:03:50,226   creating build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,227   copying skbio/io/_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,230   copying skbio/io/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,233   copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,235   copying skbio/io/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,237   copying skbio/io/registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,240   copying skbio/io/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,242   copying skbio/io/util.py -> build/lib.linux-armv7l-cpython-39/skbio/io
2024-07-08T02:03:50,245   creating build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-07-08T02:03:50,246   copying skbio/embedding/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-07-08T02:03:50,249   copying skbio/embedding/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-07-08T02:03:50,251   copying skbio/embedding/_embedding.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding
2024-07-08T02:03:50,254   creating build/lib.linux-armv7l-cpython-39/skbio/tests
2024-07-08T02:03:50,255   copying skbio/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-07-08T02:03:50,257   copying skbio/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-07-08T02:03:50,259   copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-cpython-39/skbio/tests
2024-07-08T02:03:50,263   creating build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,264   copying skbio/util/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,266   copying skbio/util/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,269   copying skbio/util/_plotting.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,271   copying skbio/util/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,273   copying skbio/util/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,275   copying skbio/util/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,277   copying skbio/util/_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util
2024-07-08T02:03:50,280   creating build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,281   copying skbio/tree/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,284   copying skbio/tree/_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,287   copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,290   copying skbio/tree/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,292   copying skbio/tree/_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree
2024-07-08T02:03:50,297   creating build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,299   copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,301   copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,303   copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,305   copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,309   copying skbio/alignment/_path.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,312   copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:03:50,316   creating build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,317   copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,320   copying skbio/sequence/distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,322   copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,325   copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,327   copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,330   copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,333   copying skbio/sequence/_alphabet.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,337   copying skbio/sequence/_substitution.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,340   copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,343   copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,345   copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,349   copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence
2024-07-08T02:03:50,352   creating build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:03:50,353   copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:03:50,357   copying skbio/diversity/_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:03:50,359   copying skbio/diversity/_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:03:50,362   copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:03:50,365   creating build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,367   copying skbio/stats/gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,370   copying skbio/stats/power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,373   copying skbio/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,375   copying skbio/stats/composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,379   copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,382   copying skbio/stats/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:03:50,385   creating build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,386   copying skbio/metadata/_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,389   copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,391   copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,395   copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,397   copying skbio/metadata/io.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,400   copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,402   copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,405   copying skbio/metadata/_enan.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,407   copying skbio/metadata/base.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,410   copying skbio/metadata/missing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:50,412   creating build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-07-08T02:03:50,413   copying skbio/table/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-07-08T02:03:50,415   copying skbio/table/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/table/tests
2024-07-08T02:03:50,418   creating build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-07-08T02:03:50,419   copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-07-08T02:03:50,421   copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-07-08T02:03:50,425   copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-07-08T02:03:50,427   copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests
2024-07-08T02:03:50,431   creating build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,432   copying skbio/io/format/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,435   copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,438   copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,440   copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,442   copying skbio/io/format/newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,445   copying skbio/io/format/sample_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,448   copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,450   copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,452   copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,455   copying skbio/io/format/embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,459   copying skbio/io/format/taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,462   copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,464   copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,467   copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,469   copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,472   copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,475   copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,478   copying skbio/io/format/embed.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,480   copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,483   copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,486   copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,488   copying skbio/io/format/biom.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,490   copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,493   copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format
2024-07-08T02:03:50,498   creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,499   copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,502   copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,506   copying skbio/io/format/tests/test_taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,509   copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,511   copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,513   copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,516   copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,519   copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,521   copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,524   copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,526   copying skbio/io/format/tests/test_sample_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,528   copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,530   copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,533   copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,536   copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,539   copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,542   copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,545   copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,547   copying skbio/io/format/tests/test_embed.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,550   copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,553   copying skbio/io/format/tests/test_biom.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,555   copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,557   copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests
2024-07-08T02:03:50,561   creating build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-07-08T02:03:50,562   copying skbio/embedding/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-07-08T02:03:50,564   copying skbio/embedding/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-07-08T02:03:50,566   copying skbio/embedding/tests/test_embedding.py -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests
2024-07-08T02:03:50,569   creating build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,570   copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,572   copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,575   copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,578   copying skbio/util/tests/test_plotting.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,580   copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests
2024-07-08T02:03:50,582   creating build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-07-08T02:03:50,583   copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-07-08T02:03:50,586   copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-07-08T02:03:50,590   copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-07-08T02:03:50,593   copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests
2024-07-08T02:03:50,596   creating build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,597   copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,603   copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,605   copying skbio/alignment/tests/test_path.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,608   copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,611   copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests
2024-07-08T02:03:50,614   creating build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-07-08T02:03:50,616   copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-07-08T02:03:50,619   creating build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,620   copying skbio/sequence/tests/test_alphabet.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,622   copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,624   copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,627   copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,630   copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,632   copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,634   copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,636   copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,641   copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,643   copying skbio/sequence/tests/test_substitution.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,645   copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests
2024-07-08T02:03:50,648   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-07-08T02:03:50,649   copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-07-08T02:03:50,651   copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-07-08T02:03:50,653   copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-07-08T02:03:50,655   copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests
2024-07-08T02:03:50,659   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,660   copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,663   copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,665   copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,668   copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,671   copying skbio/diversity/alpha/_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,674   copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,677   copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha
2024-07-08T02:03:50,680   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-07-08T02:03:50,680   copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-07-08T02:03:50,682   copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta
2024-07-08T02:03:50,686   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,686   copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,688   copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,690   copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,692   copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,694   copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,695   copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,698   copying skbio/diversity/alpha/tests/test_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests
2024-07-08T02:03:50,701   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-07-08T02:03:50,701   copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-07-08T02:03:50,703   copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests
2024-07-08T02:03:50,707   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,708   copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,711   copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,713   copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,715   copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,717   copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,719   copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,721   copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,723   copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:03:50,726   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,727   copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,729   copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,731   copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,734   copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,736   copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,738   copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,741   copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:03:50,743   creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,744   copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,746   copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,748   copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,750   copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,753   copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,757   copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests
2024-07-08T02:03:50,760   creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-07-08T02:03:50,761   copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-07-08T02:03:50,763   copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve
2024-07-08T02:03:50,766   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,767   copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,768   copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,770   copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,773   copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,776   copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,780   copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,783   copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests
2024-07-08T02:03:50,786   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,787   copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,789   copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,791   copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,793   copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,795   copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,798   copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,800   copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests
2024-07-08T02:03:50,803   creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-07-08T02:03:50,803   copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-07-08T02:03:50,806   copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests
2024-07-08T02:03:50,809   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,809   copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,811   copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,817   copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,819   copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,822   copying skbio/metadata/tests/test_metadata.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,825   copying skbio/metadata/tests/test_metadata_column.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,827   copying skbio/metadata/tests/test_enan.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,829   copying skbio/metadata/tests/test_io.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,832   copying skbio/metadata/tests/test_missing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests
2024-07-08T02:03:50,957   creating build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,957   copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,960   copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,961   copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,963   copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,965   copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,967   copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,969   copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,971   copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data
2024-07-08T02:03:50,973   creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,974   copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,976   copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,978   copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,980   copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,982   copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,984   copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,986   copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,988   copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,990   copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,992   copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,994   copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,997   copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:50,999   copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,001   copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,003   copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,005   copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,007   copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,009   copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,011   copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,013   copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,015   copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,017   copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,019   copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,021   copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,022   copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,024   copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,026   copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,028   copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,030   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,032   copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,034   copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,036   copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,039   copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,041   copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,043   copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,045   copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,047   copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,049   copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,051   copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,053   copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,055   copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,057   copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,059   copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,061   copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,063   copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,065   copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,067   copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,069   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,071   copying skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,073   copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,075   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,077   copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,079   copying skbio/io/format/tests/data/embed2.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,086   copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,087   copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,089   copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,092   copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,094   copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,096   copying skbio/io/format/tests/data/embed1.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,104   copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,106   copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,108   copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,110   copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,112   copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,114   copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,116   copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,118   copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,120   copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,122   copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,123   copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,125   copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,127   copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,129   copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,131   copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,133   copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,135   copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,137   copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,139   copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,140   copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,142   copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,144   copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,146   copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,148   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,149   copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,151   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,153   copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,155   copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,157   copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,159   copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,161   copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,162   copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,165   copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,167   copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,168   copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,170   copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,172   copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,174   copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,176   copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,178   copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,179   copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,181   copying skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,183   copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,185   copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,187   copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,189   copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,191   copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,193   copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,195   copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,197   copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,199   copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,201   copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,202   copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,204   copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,206   copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,208   copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,210   copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,212   copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,213   copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,215   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,217   copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,219   copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,221   copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,223   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,225   copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,227   copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,229   copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,231   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,233   copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,235   copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,237   copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,239   copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,241   copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,243   copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,245   copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,247   copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,249   copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,251   copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,253   copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,255   copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,257   copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,259   copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,261   copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,263   copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,265   copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,268   copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,270   copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,272   copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,274   copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,276   copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,278   copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,280   copying skbio/io/format/tests/data/sample-metadata-empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,281   copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,283   copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,285   copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,287   copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,289   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,291   copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,293   copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,296   copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,298   copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,300   copying skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,302   copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,305   copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,307   copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,309   copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,311   copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,313   copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,315   copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,317   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,319   copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,321   copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,323   copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,325   copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,327   copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,329   copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,331   copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,332   copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,334   copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,336   copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,338   copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,340   copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,342   copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,345   copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,346   copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,349   copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,351   copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,352   copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,355   copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,357   copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,359   copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,361   copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,363   copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,365   copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,367   copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,369   copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,371   copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,373   copying skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,375   copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,377   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,379   copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,380   copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,382   copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,384   copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,387   copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,388   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,390   copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,392   copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,394   copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,396   copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,398   copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,400   copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,402   copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,404   copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,406   copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,408   copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,410   copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,412   copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,414   copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,416   copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,418   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,420   copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,422   copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,424   copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,426   copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,428   copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,430   copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,431   copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,433   copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,436   copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,438   copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,440   copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,442   copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,444   copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,446   copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,448   copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,450   copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,452   copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,454   copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,456   copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,458   copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,460   copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,462   copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,464   copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,466   copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,468   copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,470   copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,472   copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,474   copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,476   copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,478   copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,480   copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,482   copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,484   copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,486   copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,489   copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,491   copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,493   copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,495   copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,497   copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,499   copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,501   copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,503   copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,505   copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,506   copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,509   copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,511   copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,513   copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,515   copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,517   copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,518   copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,520   copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,522   copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,524   copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,526   copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,528   copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,530   copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,531   copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,533   copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,535   copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,537   copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,539   copying skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,541   copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,544   copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,546   copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,548   copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,550   copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,552   copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,554   copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,556   copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,558   copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,560   copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,562   copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,564   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,566   copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,567   copying skbio/io/format/tests/data/prot.emb -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,574   copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,576   copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,578   copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,581   copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,583   copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,586   copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,588   copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,590   copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,592   copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,595   copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,597   copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,599   copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,601   copying skbio/io/format/tests/data/prot_vec.emb -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,605   copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,607   copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,609   copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,611   copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,614   copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,616   copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,618   copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,620   copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,622   copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,625   copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,627   copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,630   copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,632   copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,634   copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,637   copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,639   copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,641   copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,643   copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,646   copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,648   copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,650   copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,652   copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,654   copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,657   copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,659   copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,662   copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,664   copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,666   copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,668   copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,670   copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,673   copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,675   copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,677   copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,679   copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,681   copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,684   copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,686   copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,688   copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data
2024-07-08T02:03:51,690   creating build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data
2024-07-08T02:03:51,691   copying skbio/embedding/tests/data/embed1.txt.npy -> build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data
2024-07-08T02:03:51,698   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data
2024-07-08T02:03:51,699   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:03:51,700   copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:03:51,702   copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:03:51,704   copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:03:51,706   copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:03:51,708   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data
2024-07-08T02:03:51,709   creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,710   copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,712   copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,714   copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,716   copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,718   copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,719   copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:03:51,721   creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,722   copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,724   copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,726   copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,728   copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,730   copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,731   copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,733   copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,735   copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,737   copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,739   copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,740   copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,742   copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data
2024-07-08T02:03:51,744   creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,745   copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,747   copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,749   copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,750   copying skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,752   copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,754   copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,756   copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,758   copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,760   copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,762   copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,763   copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,765   copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,767   copying skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,770   copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,773   copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,775   copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,777   copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,779   copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,782   copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,784   copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,786   copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,788   copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,790   copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,792   copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,794   copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,796   copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data
2024-07-08T02:03:51,798   creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,798   copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,800   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,802   copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,804   copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,806   copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,808   copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,810   copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,812   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,814   copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,815   copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,817   copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,819   copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,821   copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,824   copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,826   copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,828   copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,830   copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,831   copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,833   copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,836   copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,838   copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,840   copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,841   copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,843   copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,845   copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,848   copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,849   copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,851   copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,853   copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,855   copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,857   copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,859   copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,861   copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,862   copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,864   copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,866   copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,868   copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,870   copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,871   copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,873   copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data
2024-07-08T02:03:51,875   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data
2024-07-08T02:03:51,876   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,877   copying skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,879   copying skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,881   copying skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,883   copying skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,884   copying skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,886   copying skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,888   copying skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,890   copying skbio/metadata/tests/data/invalid/header-only.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,892   copying skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,893   copying skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,895   copying skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,897   copying skbio/metadata/tests/data/invalid/empty-file -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,899   copying skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,901   copying skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,903   copying skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,905   copying skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,907   copying skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,909   copying skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,910   copying skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,912   copying skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,914   copying skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,916   copying skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,918   copying skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,920   copying skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,922   copying skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,924   copying skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,926   copying skbio/metadata/tests/data/invalid/empty-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,927   copying skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid
2024-07-08T02:03:51,929   creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,930   copying skbio/metadata/tests/data/valid/empty-rows.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,932   copying skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,934   copying skbio/metadata/tests/data/valid/simple.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,936   copying skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,938   copying skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,940   copying skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,941   copying skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,943   copying skbio/metadata/tests/data/valid/single-id.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,945   copying skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,947   copying skbio/metadata/tests/data/valid/override-insdc.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,949   copying skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,951   copying skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,953   copying skbio/metadata/tests/data/valid/qiime1.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,955   copying skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,957   copying skbio/metadata/tests/data/valid/jagged.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,959   copying skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,960   copying skbio/metadata/tests/data/valid/numeric-column.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,962   copying skbio/metadata/tests/data/valid/missing-data.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,964   copying skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,966   copying skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,968   copying skbio/metadata/tests/data/valid/no-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,970   copying skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,972   copying skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,974   copying skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,975   copying skbio/metadata/tests/data/valid/simple.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,977   copying skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,979   copying skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,981   copying skbio/metadata/tests/data/valid/column-order.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,983   copying skbio/metadata/tests/data/valid/BOM-simple.txt -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,985   copying skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,987   copying skbio/metadata/tests/data/valid/minimal.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,989   copying skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,990   copying skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,992   copying skbio/metadata/tests/data/valid/single-column.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,994   copying skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,996   copying skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:51,998   copying skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:52,000   copying skbio/metadata/tests/data/valid/comments.tsv -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid
2024-07-08T02:03:52,024   running build_ext
2024-07-08T02:03:52,031   building 'skbio.metadata._intersection' extension
2024-07-08T02:03:52,032   creating build/temp.linux-armv7l-cpython-39
2024-07-08T02:03:52,032   creating build/temp.linux-armv7l-cpython-39/skbio
2024-07-08T02:03:52,033   creating build/temp.linux-armv7l-cpython-39/skbio/metadata
2024-07-08T02:03:52,034   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o
2024-07-08T02:03:52,432   skbio/metadata/_intersection.c: In function ‘__pyx_pf_5skbio_8metadata_13_intersection_12IntervalNode_2__cinit__’:
2024-07-08T02:03:52,435   skbio/metadata/_intersection.c:4143:25: warning: integer overflow in expression of type ‘int’ results in ‘-2147483648’ [-Woverflow]
2024-07-08T02:03:52,435    4143 |   __pyx_t_2 = (RAND_MAX + 1);
2024-07-08T02:03:52,435         |                         ^
2024-07-08T02:04:07,481   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so
2024-07-08T02:04:07,634   building 'skbio.alignment._ssw_wrapper' extension
2024-07-08T02:04:07,635   creating build/temp.linux-armv7l-cpython-39/skbio/alignment
2024-07-08T02:04:07,636   creating build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib
2024-07-08T02:04:07,637   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP
2024-07-08T02:04:10,796   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Iskbio/alignment -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP
2024-07-08T02:04:11,144   In file included from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-07-08T02:04:11,145                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-07-08T02:04:11,145                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-07-08T02:04:11,145                    from skbio/alignment/_ssw_wrapper.c:1276:
2024-07-08T02:04:11,145   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-07-08T02:04:11,145      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-07-08T02:04:11,145         |  ^~~~~~~
2024-07-08T02:04:27,935   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so
2024-07-08T02:04:28,084   building 'skbio.diversity._phylogenetic' extension
2024-07-08T02:04:28,085   creating build/temp.linux-armv7l-cpython-39/skbio/diversity
2024-07-08T02:04:28,085   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o
2024-07-08T02:04:28,426   In file included from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-07-08T02:04:28,426                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-07-08T02:04:28,426                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-07-08T02:04:28,427                    from skbio/diversity/_phylogenetic.c:1249:
2024-07-08T02:04:28,427   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-07-08T02:04:28,427      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-07-08T02:04:28,427         |  ^~~~~~~
2024-07-08T02:04:35,665   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so
2024-07-08T02:04:35,795   building 'skbio.stats.ordination._cutils' extension
2024-07-08T02:04:35,795   creating build/temp.linux-armv7l-cpython-39/skbio/stats
2024-07-08T02:04:35,796   creating build/temp.linux-armv7l-cpython-39/skbio/stats/ordination
2024-07-08T02:04:35,797   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
2024-07-08T02:05:05,459   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -fopenmp
2024-07-08T02:05:05,652   building 'skbio.stats.distance._cutils' extension
2024-07-08T02:05:05,653   creating build/temp.linux-armv7l-cpython-39/skbio/stats/distance
2024-07-08T02:05:05,654   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include -I/usr/include/python3.9 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP -fopenmp
2024-07-08T02:05:05,998   In file included from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h:1909,
2024-07-08T02:05:05,998                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h:12,
2024-07-08T02:05:05,998                    from /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h:5,
2024-07-08T02:05:05,998                    from skbio/stats/distance/_cutils.c:1249:
2024-07-08T02:05:05,998   /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-07-08T02:05:05,998      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-07-08T02:05:05,999         |  ^~~~~~~
2024-07-08T02:05:51,678   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -fopenmp
2024-07-08T02:05:51,923   installing to build/bdist.linux-armv7l/wheel
2024-07-08T02:05:51,924   running install
2024-07-08T02:05:51,950   running install_lib
2024-07-08T02:05:51,959   creating build/bdist.linux-armv7l
2024-07-08T02:05:51,959   creating build/bdist.linux-armv7l/wheel
2024-07-08T02:05:51,961   creating build/bdist.linux-armv7l/wheel/skbio
2024-07-08T02:05:51,962   copying build/lib.linux-armv7l-cpython-39/skbio/_base.py -> build/bdist.linux-armv7l/wheel/skbio
2024-07-08T02:05:51,965   creating build/bdist.linux-armv7l/wheel/skbio/table
2024-07-08T02:05:51,966   copying build/lib.linux-armv7l-cpython-39/skbio/table/_base.py -> build/bdist.linux-armv7l/wheel/skbio/table
2024-07-08T02:05:51,968   copying build/lib.linux-armv7l-cpython-39/skbio/table/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/table
2024-07-08T02:05:51,970   creating build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-07-08T02:05:51,971   copying build/lib.linux-armv7l-cpython-39/skbio/table/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-07-08T02:05:51,973   copying build/lib.linux-armv7l-cpython-39/skbio/table/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/table/tests
2024-07-08T02:05:51,975   copying build/lib.linux-armv7l-cpython-39/skbio/workflow.py -> build/bdist.linux-armv7l/wheel/skbio
2024-07-08T02:05:51,978   creating build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:51,979   copying build/lib.linux-armv7l-cpython-39/skbio/io/_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:51,981   copying build/lib.linux-armv7l-cpython-39/skbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:51,983   copying build/lib.linux-armv7l-cpython-39/skbio/io/_fileobject.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:51,985   creating build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-07-08T02:05:51,986   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-07-08T02:05:51,988   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_registry.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-07-08T02:05:51,992   creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:51,992   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:51,994   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:51,996   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:51,998   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:51,999   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file_2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:52,001   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:52,002   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:52,004   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data
2024-07-08T02:05:52,005   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-07-08T02:05:52,007   copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests
2024-07-08T02:05:52,010   creating build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,011   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,013   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,015   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,017   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,019   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,022   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/sample_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,024   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,026   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,028   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,031   creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,032   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,035   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,038   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,040   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,042   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,044   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,046   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,048   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,050   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,053   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,060   creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,061   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,063   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,064   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,066   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,068   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,069   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,071   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_column_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,072   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,074   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,076   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,077   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,080   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,081   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,083   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,084   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,086   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,088   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,089   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,091   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,092   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error21 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,094   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,095   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,097   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,099   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,100   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,102   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,103   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,105   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error23 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,107   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,108   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,110   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/empty -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,111   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,113   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_reference -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,115   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_constructed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,116   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,118   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,120   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,122   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,124   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,126   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,127   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,129   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error18 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,131   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,133   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,135   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,136   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,138   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,140   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,141   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-comments.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,143   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,145   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,146   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,148   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embed2.txt.npy -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,154   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,156   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,158   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,160   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,161   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,163   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embed1.txt.npy -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,171   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_del.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,173   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,174   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,176   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error14 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,178   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,179   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,181   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,183   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,188   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,193   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_nonstring_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,203   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,204   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,209   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,220   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,229   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_no_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,232   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,234   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,235   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_diff_ids.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,239   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,240   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,242   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,243   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,247   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,249   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,250   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,252   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_rna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,255   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,259   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,262   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,263   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,265   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,267   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,269   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,270   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,272   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,273   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,275   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error9 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,285   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,288   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,298   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,303   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,305   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,307   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,309   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error11 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,311   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,312   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,314   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,316   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,317   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,319   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,324   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,326   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,329   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,338   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,341   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,380   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,406   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error22 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,421   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,425   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error17 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,440   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,448   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,449   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,451   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_data_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,456   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,458   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,460   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,461   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,463   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,464   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,466   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,481   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,501   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,725   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,730   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,731   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,738   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,743   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,745   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,747   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,750   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,769   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,770   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,787   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,788   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,790   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,803   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,805   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_different_padding -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,808   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,810   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/prot.emb -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,819   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,822   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,835   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,837   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,838   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/prot_vec.emb -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,845   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,848   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,850   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,851   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,853   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,855   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,859   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_lane -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,861   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,862   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error10 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,866   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,868   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,869   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,871   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,873   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,874   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,876   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,878   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,880   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,884   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,886   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,887   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,889   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,891   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,892   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,894   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,896   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
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2024-07-08T02:05:52,904   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,906   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data
2024-07-08T02:05:52,908   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sample_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,910   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,911   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,913   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,916   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,918   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,921   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,923   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,925   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embed.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,928   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,930   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_biom.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,933   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,936   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests
2024-07-08T02:05:52,938   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,942   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,945   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,947   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:52,952   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_blast.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,166   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,169   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,172   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,176   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embed.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,179   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,183   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,186   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,189   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/biom.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,191   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,195   copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format
2024-07-08T02:05:53,199   copying build/lib.linux-armv7l-cpython-39/skbio/io/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:53,201   copying build/lib.linux-armv7l-cpython-39/skbio/io/registry.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:53,206   copying build/lib.linux-armv7l-cpython-39/skbio/io/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:53,208   copying build/lib.linux-armv7l-cpython-39/skbio/io/util.py -> build/bdist.linux-armv7l/wheel/skbio/io
2024-07-08T02:05:53,211   copying build/lib.linux-armv7l-cpython-39/skbio/__init__.py -> build/bdist.linux-armv7l/wheel/skbio
2024-07-08T02:05:53,214   creating build/bdist.linux-armv7l/wheel/skbio/embedding
2024-07-08T02:05:53,216   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-07-08T02:05:53,219   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-07-08T02:05:53,222   creating build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-07-08T02:05:53,224   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-07-08T02:05:53,227   creating build/bdist.linux-armv7l/wheel/skbio/embedding/tests/data
2024-07-08T02:05:53,228   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/data/embed1.txt.npy -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests/data
2024-07-08T02:05:53,242   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-07-08T02:05:53,245   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/tests/test_embedding.py -> build/bdist.linux-armv7l/wheel/skbio/embedding/tests
2024-07-08T02:05:53,248   copying build/lib.linux-armv7l-cpython-39/skbio/embedding/_embedding.py -> build/bdist.linux-armv7l/wheel/skbio/embedding
2024-07-08T02:05:53,252   creating build/bdist.linux-armv7l/wheel/skbio/tests
2024-07-08T02:05:53,253   copying build/lib.linux-armv7l-cpython-39/skbio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-07-08T02:05:53,256   copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-07-08T02:05:53,258   copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_workflow.py -> build/bdist.linux-armv7l/wheel/skbio/tests
2024-07-08T02:05:53,262   creating build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,263   copying build/lib.linux-armv7l-cpython-39/skbio/util/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,266   creating build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,267   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,269   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,271   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,273   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,275   copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests
2024-07-08T02:05:53,277   copying build/lib.linux-armv7l-cpython-39/skbio/util/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,279   copying build/lib.linux-armv7l-cpython-39/skbio/util/_plotting.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,281   copying build/lib.linux-armv7l-cpython-39/skbio/util/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,283   copying build/lib.linux-armv7l-cpython-39/skbio/util/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,285   copying build/lib.linux-armv7l-cpython-39/skbio/util/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,287   copying build/lib.linux-armv7l-cpython-39/skbio/util/_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util
2024-07-08T02:05:53,289   creating build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,290   copying build/lib.linux-armv7l-cpython-39/skbio/tree/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,293   creating build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-07-08T02:05:53,294   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-07-08T02:05:53,295   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-07-08T02:05:53,299   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-07-08T02:05:53,301   copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests
2024-07-08T02:05:53,304   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,306   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,309   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,310   copying build/lib.linux-armv7l-cpython-39/skbio/tree/_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree
2024-07-08T02:05:53,315   creating build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,315   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,335   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,337   creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,338   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,344   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,345   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_path.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,348   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_ssw.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,351   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests
2024-07-08T02:05:53,354   creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib
2024-07-08T02:05:53,355   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/_lib
2024-07-08T02:05:53,357   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_indexing.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,359   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,360   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,364   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_path.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,367   copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment
2024-07-08T02:05:53,370   creating build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,371   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,373   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,376   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,378   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,380   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,383   creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,384   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_alphabet.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,387   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,388   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,391   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,393   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,395   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,397   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,399   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,402   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,405   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_substitution.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,407   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests
2024-07-08T02:05:53,410   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,411   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_alphabet.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,414   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_substitution.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,417   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_nucleotide_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,419   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,421   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,426   copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence
2024-07-08T02:05:53,430   creating build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,431   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,433   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,436   creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-07-08T02:05:53,437   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-07-08T02:05:53,439   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-07-08T02:05:53,441   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-07-08T02:05:53,443   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests
2024-07-08T02:05:53,447   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,450   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,450   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,454   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,456   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,458   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,461   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,462   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,464   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,466   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,467   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,470   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data
2024-07-08T02:05:53,471   creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:05:53,472   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:05:53,474   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:05:53,476   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:05:53,478   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt
2024-07-08T02:05:53,479   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,481   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,484   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests
2024-07-08T02:05:53,486   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,489   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,491   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha
2024-07-08T02:05:53,494   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-07-08T02:05:53,495   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-07-08T02:05:53,497   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-07-08T02:05:53,498   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-07-08T02:05:53,500   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data
2024-07-08T02:05:53,502   creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,502   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,504   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,506   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,508   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,509   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,511   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt
2024-07-08T02:05:53,513   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests
2024-07-08T02:05:53,516   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta
2024-07-08T02:05:53,519   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,532   copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity
2024-07-08T02:05:53,535   creating build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,536   copying build/lib.linux-armv7l-cpython-39/skbio/stats/gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,539   copying build/lib.linux-armv7l-cpython-39/skbio/stats/power.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,543   copying build/lib.linux-armv7l-cpython-39/skbio/stats/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,545   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,546   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,549   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,551   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,553   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,556   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,557   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,559   creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,560   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,562   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,564   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,565   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/frameSeries_grouping.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,567   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,569   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,570   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,572   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,574   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,576   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,577   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,579   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,581   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/frameSeries_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,583   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,586   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,587   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,589   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,591   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,593   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,596   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,598   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,599   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,601   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,603   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,605   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,607   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data
2024-07-08T02:05:53,609   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,611   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,613   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,617   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,619   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,621   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests
2024-07-08T02:05:53,623   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,625   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,628   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,630   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,633   copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/distance
2024-07-08T02:05:53,666   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,667   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,670   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,672   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,674   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,677   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,679   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,681   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,683   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,686   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,689   creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,690   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,693   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,695   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,697   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,699   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,701   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,703   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,705   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,707   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,709   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,711   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,713   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,716   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,718   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,720   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,722   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,725   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,727   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,729   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,731   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,733   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,735   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,737   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,739   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,742   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,744   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,746   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,748   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,750   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,752   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,754   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,756   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,758   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,760   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,762   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,764   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,766   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,768   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,770   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,772   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data
2024-07-08T02:05:53,774   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,777   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,779   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests
2024-07-08T02:05:53,781   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,784   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,787   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,811   copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination
2024-07-08T02:05:53,814   creating build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,815   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,817   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,819   creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,820   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,821   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,823   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,825   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,826   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,828   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,830   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,832   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,833   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,835   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,837   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,838   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data
2024-07-08T02:05:53,840   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,842   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,845   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,848   copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_power.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests
2024-07-08T02:05:53,851   copying build/lib.linux-armv7l-cpython-39/skbio/stats/composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,854   copying build/lib.linux-armv7l-cpython-39/skbio/stats/_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,856   copying build/lib.linux-armv7l-cpython-39/skbio/stats/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats
2024-07-08T02:05:53,858   creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-07-08T02:05:53,859   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-07-08T02:05:53,861   creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-07-08T02:05:53,862   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-07-08T02:05:53,864   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests
2024-07-08T02:05:53,866   copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve
2024-07-08T02:05:53,869   creating build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:53,870   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:53,874   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:53,875   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:53,879   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:53,879   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:53,882   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:53,884   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:53,887   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data
2024-07-08T02:05:53,889   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,890   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-before-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,892   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,894   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/simple-utf-16be.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,895   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/unrecognized-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,897   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,899   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,901   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,902   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/header-only.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,904   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,905   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,907   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,909   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-file -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,910   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-directives.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,912   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/simple-utf-16le.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,913   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,915   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,917   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,918   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,920   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/invalid-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,922   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/qiime1-empty.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,923   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,925   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-column-name.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,927   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/whitespace-only-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,928   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/data-longer-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,930   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-ids.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,931   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/duplicate-column-names.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,933   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/empty-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,935   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/invalid/non-utf-8.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/invalid
2024-07-08T02:05:53,937   creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,938   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/empty-rows.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,940   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-insdc.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,942   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,943   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,945   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/biom-observation-metadata.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,947   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/complete-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,948   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,950   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/single-id.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,951   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/mac-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,953   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/override-insdc.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,955   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,956   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/all-cells-padded.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,958   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiime1.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,959   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/windows-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,961   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/jagged.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,963   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-newline-at-eof.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,965   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/numeric-column.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,966   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-data.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,968   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiita-sample-information.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,970   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,971   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,974   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/empty-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,976   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/qiita-preparation-information.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,978   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/non-standard-characters.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,980   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,983   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/recommended-ids.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,985   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,987   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/column-order.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,989   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/BOM-simple.txt -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,991   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,994   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/minimal.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,996   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:53,998   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/trailing-columns.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,000   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/single-column.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,003   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/unix-line-endings.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,006   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/simple-with-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,008   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/partial-types-directive.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,010   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/data/valid/comments.tsv -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests/data/valid
2024-07-08T02:05:54,012   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_intersection.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,015   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_metadata.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,019   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_metadata_column.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,023   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_enan.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,025   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_io.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,030   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_missing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests
2024-07-08T02:05:54,032   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,035   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/io.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,038   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,041   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,046   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_enan.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,048   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/base.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,050   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/missing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,053   copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/metadata
2024-07-08T02:05:54,080   copying build/lib.linux-armv7l-cpython-39/skbio/test.py -> build/bdist.linux-armv7l/wheel/skbio
2024-07-08T02:05:54,081   running install_egg_info
2024-07-08T02:05:54,094   running egg_info
2024-07-08T02:05:54,100   writing scikit_bio.egg-info/PKG-INFO
2024-07-08T02:05:54,104   writing dependency_links to scikit_bio.egg-info/dependency_links.txt
2024-07-08T02:05:54,106   writing requirements to scikit_bio.egg-info/requires.txt
2024-07-08T02:05:54,107   writing top-level names to scikit_bio.egg-info/top_level.txt
2024-07-08T02:05:54,298   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,298   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,298   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,298   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,299   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,299   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,299   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,299   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,299   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,300   dependency /tmp/pip-build-env-u0jpmw8_/overlay/lib/python3.9/site-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-07-08T02:05:54,306   reading manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:05:54,335   reading manifest template 'MANIFEST.in'
2024-07-08T02:05:54,384   no previously-included directories found matching 'doc/build'
2024-07-08T02:05:54,387   no previously-included directories found matching 'doc/source/generated'
2024-07-08T02:05:54,389   no previously-included directories found matching 'web/_build'
2024-07-08T02:05:54,395   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2024-07-08T02:05:54,401   warning: no previously-included files matching '*.pyo' found anywhere in distribution
2024-07-08T02:05:54,407   warning: no previously-included files matching '*.so' found anywhere in distribution
2024-07-08T02:05:54,411   warning: no previously-included files matching '.*.swp' found anywhere in distribution
2024-07-08T02:05:54,416   warning: no previously-included files matching '.coverage' found anywhere in distribution
2024-07-08T02:05:54,417   adding license file 'LICENSE.txt'
2024-07-08T02:05:54,475   writing manifest file 'scikit_bio.egg-info/SOURCES.txt'
2024-07-08T02:05:54,478   Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.6.2-py3.9.egg-info
2024-07-08T02:05:54,489   running install_scripts
2024-07-08T02:05:54,540   creating build/bdist.linux-armv7l/wheel/scikit_bio-0.6.2.dist-info/WHEEL
2024-07-08T02:05:54,543   creating '/tmp/pip-wheel-9oia_hoe/.tmp-y7jtacvy/scikit_bio-0.6.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-07-08T02:05:54,547   adding 'skbio/__init__.py'
2024-07-08T02:05:54,548   adding 'skbio/_base.py'
2024-07-08T02:05:54,549   adding 'skbio/test.py'
2024-07-08T02:05:54,552   adding 'skbio/workflow.py'
2024-07-08T02:05:54,554   adding 'skbio/alignment/__init__.py'
2024-07-08T02:05:54,556   adding 'skbio/alignment/_indexing.py'
2024-07-08T02:05:54,560   adding 'skbio/alignment/_pairwise.py'
2024-07-08T02:05:54,563   adding 'skbio/alignment/_path.py'
2024-07-08T02:05:54,565   adding 'skbio/alignment/_repr.py'
2024-07-08T02:05:54,736   adding 'skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so'
2024-07-08T02:05:54,750   adding 'skbio/alignment/_tabular_msa.py'
2024-07-08T02:05:54,752   adding 'skbio/alignment/_lib/__init__.py'
2024-07-08T02:05:54,754   adding 'skbio/alignment/tests/__init__.py'
2024-07-08T02:05:54,757   adding 'skbio/alignment/tests/test_pairwise.py'
2024-07-08T02:05:54,759   adding 'skbio/alignment/tests/test_path.py'
2024-07-08T02:05:54,762   adding 'skbio/alignment/tests/test_ssw.py'
2024-07-08T02:05:54,773   adding 'skbio/alignment/tests/test_tabular_msa.py'
2024-07-08T02:05:54,777   adding 'skbio/diversity/__init__.py'
2024-07-08T02:05:54,779   adding 'skbio/diversity/_block.py'
2024-07-08T02:05:54,782   adding 'skbio/diversity/_driver.py'
2024-07-08T02:05:54,863   adding 'skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so'
2024-07-08T02:05:54,867   adding 'skbio/diversity/_util.py'
2024-07-08T02:05:54,869   adding 'skbio/diversity/alpha/__init__.py'
2024-07-08T02:05:54,871   adding 'skbio/diversity/alpha/_ace.py'
2024-07-08T02:05:54,876   adding 'skbio/diversity/alpha/_base.py'
2024-07-08T02:05:54,878   adding 'skbio/diversity/alpha/_chao1.py'
2024-07-08T02:05:54,879   adding 'skbio/diversity/alpha/_gini.py'
2024-07-08T02:05:54,882   adding 'skbio/diversity/alpha/_lladser.py'
2024-07-08T02:05:54,884   adding 'skbio/diversity/alpha/_pd.py'
2024-07-08T02:05:54,886   adding 'skbio/diversity/alpha/tests/__init__.py'
2024-07-08T02:05:54,887   adding 'skbio/diversity/alpha/tests/test_ace.py'
2024-07-08T02:05:54,890   adding 'skbio/diversity/alpha/tests/test_base.py'
2024-07-08T02:05:54,891   adding 'skbio/diversity/alpha/tests/test_chao1.py'
2024-07-08T02:05:54,892   adding 'skbio/diversity/alpha/tests/test_gini.py'
2024-07-08T02:05:54,894   adding 'skbio/diversity/alpha/tests/test_lladser.py'
2024-07-08T02:05:54,896   adding 'skbio/diversity/alpha/tests/test_pd.py'
2024-07-08T02:05:54,898   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md'
2024-07-08T02:05:54,899   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt'
2024-07-08T02:05:54,900   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv'
2024-07-08T02:05:54,902   adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk'
2024-07-08T02:05:54,903   adding 'skbio/diversity/beta/__init__.py'
2024-07-08T02:05:54,906   adding 'skbio/diversity/beta/_unifrac.py'
2024-07-08T02:05:54,908   adding 'skbio/diversity/beta/tests/__init__.py'
2024-07-08T02:05:54,910   adding 'skbio/diversity/beta/tests/test_unifrac.py'
2024-07-08T02:05:54,913   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md'
2024-07-08T02:05:54,914   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv'
2024-07-08T02:05:54,915   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk'
2024-07-08T02:05:54,916   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt'
2024-07-08T02:05:54,917   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt'
2024-07-08T02:05:54,919   adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt'
2024-07-08T02:05:54,920   adding 'skbio/diversity/tests/__init__.py'
2024-07-08T02:05:54,922   adding 'skbio/diversity/tests/test_block.py'
2024-07-08T02:05:54,925   adding 'skbio/diversity/tests/test_driver.py'
2024-07-08T02:05:54,927   adding 'skbio/diversity/tests/test_util.py'
2024-07-08T02:05:54,929   adding 'skbio/embedding/__init__.py'
2024-07-08T02:05:54,931   adding 'skbio/embedding/_embedding.py'
2024-07-08T02:05:54,933   adding 'skbio/embedding/_protein.py'
2024-07-08T02:05:54,934   adding 'skbio/embedding/tests/__init__.py'
2024-07-08T02:05:54,936   adding 'skbio/embedding/tests/test_embedding.py'
2024-07-08T02:05:54,938   adding 'skbio/embedding/tests/test_protein.py'
2024-07-08T02:05:54,976   adding 'skbio/embedding/tests/data/embed1.txt.npy'
2024-07-08T02:05:54,980   adding 'skbio/io/__init__.py'
2024-07-08T02:05:54,981   adding 'skbio/io/_exception.py'
2024-07-08T02:05:54,983   adding 'skbio/io/_fileobject.py'
2024-07-08T02:05:54,984   adding 'skbio/io/_iosources.py'
2024-07-08T02:05:54,985   adding 'skbio/io/_warning.py'
2024-07-08T02:05:54,990   adding 'skbio/io/registry.py'
2024-07-08T02:05:54,993   adding 'skbio/io/util.py'
2024-07-08T02:05:54,995   adding 'skbio/io/format/__init__.py'
2024-07-08T02:05:54,997   adding 'skbio/io/format/_base.py'
2024-07-08T02:05:54,998   adding 'skbio/io/format/_blast.py'
2024-07-08T02:05:55,000   adding 'skbio/io/format/_sequence_feature_vocabulary.py'
2024-07-08T02:05:55,002   adding 'skbio/io/format/binary_dm.py'
2024-07-08T02:05:55,003   adding 'skbio/io/format/biom.py'
2024-07-08T02:05:55,005   adding 'skbio/io/format/blast6.py'
2024-07-08T02:05:55,007   adding 'skbio/io/format/blast7.py'
2024-07-08T02:05:55,009   adding 'skbio/io/format/clustal.py'
2024-07-08T02:05:55,011   adding 'skbio/io/format/embed.py'
2024-07-08T02:05:55,018   adding 'skbio/io/format/embl.py'
2024-07-08T02:05:55,020   adding 'skbio/io/format/emptyfile.py'
2024-07-08T02:05:55,024   adding 'skbio/io/format/fasta.py'
2024-07-08T02:05:55,027   adding 'skbio/io/format/fastq.py'
2024-07-08T02:05:55,031   adding 'skbio/io/format/genbank.py'
2024-07-08T02:05:55,033   adding 'skbio/io/format/gff3.py'
2024-07-08T02:05:55,035   adding 'skbio/io/format/lsmat.py'
2024-07-08T02:05:55,038   adding 'skbio/io/format/newick.py'
2024-07-08T02:05:55,041   adding 'skbio/io/format/ordination.py'
2024-07-08T02:05:55,043   adding 'skbio/io/format/phylip.py'
2024-07-08T02:05:55,045   adding 'skbio/io/format/qseq.py'
2024-07-08T02:05:55,047   adding 'skbio/io/format/sample_metadata.py'
2024-07-08T02:05:55,051   adding 'skbio/io/format/stockholm.py'
2024-07-08T02:05:55,053   adding 'skbio/io/format/taxdump.py'
2024-07-08T02:05:55,055   adding 'skbio/io/format/tests/__init__.py'
2024-07-08T02:05:55,057   adding 'skbio/io/format/tests/test_base.py'
2024-07-08T02:05:55,058   adding 'skbio/io/format/tests/test_binary_dm.py'
2024-07-08T02:05:55,060   adding 'skbio/io/format/tests/test_biom.py'
2024-07-08T02:05:55,061   adding 'skbio/io/format/tests/test_blast6.py'
2024-07-08T02:05:55,063   adding 'skbio/io/format/tests/test_blast7.py'
2024-07-08T02:05:55,065   adding 'skbio/io/format/tests/test_clustal.py'
2024-07-08T02:05:55,066   adding 'skbio/io/format/tests/test_embed.py'
2024-07-08T02:05:55,070   adding 'skbio/io/format/tests/test_embl.py'
2024-07-08T02:05:55,071   adding 'skbio/io/format/tests/test_emptyfile.py'
2024-07-08T02:05:55,075   adding 'skbio/io/format/tests/test_fasta.py'
2024-07-08T02:05:55,078   adding 'skbio/io/format/tests/test_fastq.py'
2024-07-08T02:05:55,080   adding 'skbio/io/format/tests/test_genbank.py'
2024-07-08T02:05:55,082   adding 'skbio/io/format/tests/test_gff3.py'
2024-07-08T02:05:55,084   adding 'skbio/io/format/tests/test_lsmat.py'
2024-07-08T02:05:55,086   adding 'skbio/io/format/tests/test_newick.py'
2024-07-08T02:05:55,088   adding 'skbio/io/format/tests/test_ordination.py'
2024-07-08T02:05:55,090   adding 'skbio/io/format/tests/test_phylip.py'
2024-07-08T02:05:55,091   adding 'skbio/io/format/tests/test_qseq.py'
2024-07-08T02:05:55,093   adding 'skbio/io/format/tests/test_sample_metadata.py'
2024-07-08T02:05:55,094   adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py'
2024-07-08T02:05:55,097   adding 'skbio/io/format/tests/test_stockholm.py'
2024-07-08T02:05:55,099   adding 'skbio/io/format/tests/test_taxdump.py'
2024-07-08T02:05:55,107   adding 'skbio/io/format/tests/data/blast6_custom_minimal'
2024-07-08T02:05:55,108   adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans'
2024-07-08T02:05:55,109   adding 'skbio/io/format/tests/data/blast6_custom_multi_line'
2024-07-08T02:05:55,110   adding 'skbio/io/format/tests/data/blast6_custom_single_line'
2024-07-08T02:05:55,111   adding 'skbio/io/format/tests/data/blast6_default_multi_line'
2024-07-08T02:05:55,112   adding 'skbio/io/format/tests/data/blast6_default_single_line'
2024-07-08T02:05:55,113   adding 'skbio/io/format/tests/data/blast6_invalid_column_types'
2024-07-08T02:05:55,115   adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns'
2024-07-08T02:05:55,116   adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column'
2024-07-08T02:05:55,117   adding 'skbio/io/format/tests/data/blast7_custom_minimal'
2024-07-08T02:05:55,118   adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans'
2024-07-08T02:05:55,119   adding 'skbio/io/format/tests/data/blast7_custom_multi_line'
2024-07-08T02:05:55,120   adding 'skbio/io/format/tests/data/blast7_custom_single_line'
2024-07-08T02:05:55,121   adding 'skbio/io/format/tests/data/blast7_default_multi_line'
2024-07-08T02:05:55,123   adding 'skbio/io/format/tests/data/blast7_default_single_line'
2024-07-08T02:05:55,124   adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields'
2024-07-08T02:05:55,125   adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer'
2024-07-08T02:05:55,126   adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2'
2024-07-08T02:05:55,127   adding 'skbio/io/format/tests/data/blast7_invalid_gibberish'
2024-07-08T02:05:55,128   adding 'skbio/io/format/tests/data/blast7_invalid_no_data'
2024-07-08T02:05:55,129   adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns'
2024-07-08T02:05:55,131   adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field'
2024-07-08T02:05:55,168   adding 'skbio/io/format/tests/data/embed1.txt.npy'
2024-07-08T02:05:55,209   adding 'skbio/io/format/tests/data/embed2.txt.npy'
2024-07-08T02:05:55,212   adding 'skbio/io/format/tests/data/embl_constructed'
2024-07-08T02:05:55,213   adding 'skbio/io/format/tests/data/embl_feature_level_record'
2024-07-08T02:05:55,215   adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT'
2024-07-08T02:05:55,217   adding 'skbio/io/format/tests/data/embl_multi_records'
2024-07-08T02:05:55,218   adding 'skbio/io/format/tests/data/embl_single_record'
2024-07-08T02:05:55,219   adding 'skbio/io/format/tests/data/embl_single_record_lower'
2024-07-08T02:05:55,221   adding 'skbio/io/format/tests/data/embl_single_record_simple'
2024-07-08T02:05:55,222   adding 'skbio/io/format/tests/data/embl_single_record_upper'
2024-07-08T02:05:55,223   adding 'skbio/io/format/tests/data/embl_uniprot_record'
2024-07-08T02:05:55,224   adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace'
2024-07-08T02:05:55,225   adding 'skbio/io/format/tests/data/empty'
2024-07-08T02:05:55,226   adding 'skbio/io/format/tests/data/error_diff_ids.fastq'
2024-07-08T02:05:55,228   adding 'skbio/io/format/tests/data/error_double_qual.fastq'
2024-07-08T02:05:55,229   adding 'skbio/io/format/tests/data/error_double_seq.fastq'
2024-07-08T02:05:55,230   adding 'skbio/io/format/tests/data/error_long_qual.fastq'
2024-07-08T02:05:55,232   adding 'skbio/io/format/tests/data/error_no_qual.fastq'
2024-07-08T02:05:55,233   adding 'skbio/io/format/tests/data/error_qual_del.fastq'
2024-07-08T02:05:55,234   adding 'skbio/io/format/tests/data/error_qual_escape.fastq'
2024-07-08T02:05:55,235   adding 'skbio/io/format/tests/data/error_qual_null.fastq'
2024-07-08T02:05:55,236   adding 'skbio/io/format/tests/data/error_qual_space.fastq'
2024-07-08T02:05:55,238   adding 'skbio/io/format/tests/data/error_qual_tab.fastq'
2024-07-08T02:05:55,239   adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq'
2024-07-08T02:05:55,240   adding 'skbio/io/format/tests/data/error_qual_vtab.fastq'
2024-07-08T02:05:55,241   adding 'skbio/io/format/tests/data/error_short_qual.fastq'
2024-07-08T02:05:55,243   adding 'skbio/io/format/tests/data/error_spaces.fastq'
2024-07-08T02:05:55,244   adding 'skbio/io/format/tests/data/error_tabs.fastq'
2024-07-08T02:05:55,245   adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq'
2024-07-08T02:05:55,246   adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq'
2024-07-08T02:05:55,247   adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq'
2024-07-08T02:05:55,249   adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq'
2024-07-08T02:05:55,250   adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq'
2024-07-08T02:05:55,251   adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq'
2024-07-08T02:05:55,252   adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq'
2024-07-08T02:05:55,253   adding 'skbio/io/format/tests/data/fasta_10_seqs'
2024-07-08T02:05:55,254   adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults'
2024-07-08T02:05:55,255   adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults'
2024-07-08T02:05:55,257   adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file'
2024-07-08T02:05:55,258   adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file'
2024-07-08T02:05:55,259   adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file'
2024-07-08T02:05:55,260   adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file'
2024-07-08T02:05:55,261   adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records'
2024-07-08T02:05:55,262   adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file'
2024-07-08T02:05:55,264   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str'
2024-07-08T02:05:55,265   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char'
2024-07-08T02:05:55,266   adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none'
2024-07-08T02:05:55,267   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str'
2024-07-08T02:05:55,268   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char'
2024-07-08T02:05:55,269   adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none'
2024-07-08T02:05:55,271   adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs'
2024-07-08T02:05:55,272   adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header'
2024-07-08T02:05:55,273   adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence'
2024-07-08T02:05:55,274   adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence'
2024-07-08T02:05:55,275   adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format'
2024-07-08T02:05:55,276   adding 'skbio/io/format/tests/data/fasta_invalid_missing_header'
2024-07-08T02:05:55,277   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first'
2024-07-08T02:05:55,278   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last'
2024-07-08T02:05:55,280   adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle'
2024-07-08T02:05:55,281   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header'
2024-07-08T02:05:55,282   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence'
2024-07-08T02:05:55,283   adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence'
2024-07-08T02:05:55,284   adding 'skbio/io/format/tests/data/fasta_max_width_1'
2024-07-08T02:05:55,285   adding 'skbio/io/format/tests/data/fasta_max_width_5'
2024-07-08T02:05:55,286   adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores'
2024-07-08T02:05:55,288   adding 'skbio/io/format/tests/data/fasta_multi_seq'
2024-07-08T02:05:55,289   adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip'
2024-07-08T02:05:55,290   adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels'
2024-07-08T02:05:55,291   adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults'
2024-07-08T02:05:55,292   adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults'
2024-07-08T02:05:55,293   adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults'
2024-07-08T02:05:55,294   adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults'
2024-07-08T02:05:55,295   adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults'
2024-07-08T02:05:55,296   adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults'
2024-07-08T02:05:55,297   adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults'
2024-07-08T02:05:55,299   adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults'
2024-07-08T02:05:55,300   adding 'skbio/io/format/tests/data/fasta_single_seq'
2024-07-08T02:05:55,301   adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type'
2024-07-08T02:05:55,302   adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records'
2024-07-08T02:05:55,303   adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file'
2024-07-08T02:05:55,304   adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file'
2024-07-08T02:05:55,306   adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file'
2024-07-08T02:05:55,307   adding 'skbio/io/format/tests/data/fastq_blank_lines'
2024-07-08T02:05:55,308   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header'
2024-07-08T02:05:55,309   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus'
2024-07-08T02:05:55,310   adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq'
2024-07-08T02:05:55,311   adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol'
2024-07-08T02:05:55,312   adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual'
2024-07-08T02:05:55,314   adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq'
2024-07-08T02:05:55,315   adding 'skbio/io/format/tests/data/fastq_invalid_missing_header'
2024-07-08T02:05:55,316   adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data'
2024-07-08T02:05:55,317   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header'
2024-07-08T02:05:55,318   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus'
2024-07-08T02:05:55,320   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq'
2024-07-08T02:05:55,321   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual'
2024-07-08T02:05:55,322   adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq'
2024-07-08T02:05:55,323   adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records'
2024-07-08T02:05:55,324   adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file'
2024-07-08T02:05:55,325   adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file'
2024-07-08T02:05:55,327   adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger'
2024-07-08T02:05:55,328   adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping'
2024-07-08T02:05:55,329   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records'
2024-07-08T02:05:55,330   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file'
2024-07-08T02:05:55,331   adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file'
2024-07-08T02:05:55,332   adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3'
2024-07-08T02:05:55,334   adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8'
2024-07-08T02:05:55,335   adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines'
2024-07-08T02:05:55,336   adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description'
2024-07-08T02:05:55,337   adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description'
2024-07-08T02:05:55,338   adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description'
2024-07-08T02:05:55,340   adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults'
2024-07-08T02:05:55,341   adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults'
2024-07-08T02:05:55,342   adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults'
2024-07-08T02:05:55,343   adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file'
2024-07-08T02:05:55,344   adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file'
2024-07-08T02:05:55,345   adding 'skbio/io/format/tests/data/genbank_missing_locus_name'
2024-07-08T02:05:55,347   adding 'skbio/io/format/tests/data/genbank_multi_records'
2024-07-08T02:05:55,348   adding 'skbio/io/format/tests/data/genbank_single_record'
2024-07-08T02:05:55,349   adding 'skbio/io/format/tests/data/genbank_single_record_lower'
2024-07-08T02:05:55,350   adding 'skbio/io/format/tests/data/genbank_single_record_upper'
2024-07-08T02:05:55,351   adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace'
2024-07-08T02:05:55,352   adding 'skbio/io/format/tests/data/gff3_bad_missing_directive'
2024-07-08T02:05:55,354   adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns'
2024-07-08T02:05:55,355   adding 'skbio/io/format/tests/data/gff3_dna'
2024-07-08T02:05:55,356   adding 'skbio/io/format/tests/data/gff3_multi_record'
2024-07-08T02:05:55,357   adding 'skbio/io/format/tests/data/gff3_single_record'
2024-07-08T02:05:55,358   adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq'
2024-07-08T02:05:55,359   adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq'
2024-07-08T02:05:55,361   adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq'
2024-07-08T02:05:55,362   adding 'skbio/io/format/tests/data/legacy9_and_blast7_default'
2024-07-08T02:05:55,363   adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields'
2024-07-08T02:05:55,364   adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns'
2024-07-08T02:05:55,365   adding 'skbio/io/format/tests/data/legacy9_mixed_nans'
2024-07-08T02:05:55,367   adding 'skbio/io/format/tests/data/legacy9_multi_line'
2024-07-08T02:05:55,368   adding 'skbio/io/format/tests/data/legacy9_single_line'
2024-07-08T02:05:55,370   adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq'
2024-07-08T02:05:55,372   adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq'
2024-07-08T02:05:55,375   adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq'
2024-07-08T02:05:55,376   adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq'
2024-07-08T02:05:55,377   adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq'
2024-07-08T02:05:55,378   adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq'
2024-07-08T02:05:55,380   adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq'
2024-07-08T02:05:55,381   adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq'
2024-07-08T02:05:55,382   adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq'
2024-07-08T02:05:55,383   adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores'
2024-07-08T02:05:55,385   adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores'
2024-07-08T02:05:55,386   adding 'skbio/io/format/tests/data/ordination_error1'
2024-07-08T02:05:55,387   adding 'skbio/io/format/tests/data/ordination_error10'
2024-07-08T02:05:55,389   adding 'skbio/io/format/tests/data/ordination_error11'
2024-07-08T02:05:55,390   adding 'skbio/io/format/tests/data/ordination_error12'
2024-07-08T02:05:55,392   adding 'skbio/io/format/tests/data/ordination_error13'
2024-07-08T02:05:55,393   adding 'skbio/io/format/tests/data/ordination_error14'
2024-07-08T02:05:55,394   adding 'skbio/io/format/tests/data/ordination_error15'
2024-07-08T02:05:55,396   adding 'skbio/io/format/tests/data/ordination_error16'
2024-07-08T02:05:55,397   adding 'skbio/io/format/tests/data/ordination_error17'
2024-07-08T02:05:55,399   adding 'skbio/io/format/tests/data/ordination_error18'
2024-07-08T02:05:55,400   adding 'skbio/io/format/tests/data/ordination_error19'
2024-07-08T02:05:55,401   adding 'skbio/io/format/tests/data/ordination_error2'
2024-07-08T02:05:55,403   adding 'skbio/io/format/tests/data/ordination_error20'
2024-07-08T02:05:55,404   adding 'skbio/io/format/tests/data/ordination_error21'
2024-07-08T02:05:55,405   adding 'skbio/io/format/tests/data/ordination_error22'
2024-07-08T02:05:55,406   adding 'skbio/io/format/tests/data/ordination_error23'
2024-07-08T02:05:55,407   adding 'skbio/io/format/tests/data/ordination_error24'
2024-07-08T02:05:55,409   adding 'skbio/io/format/tests/data/ordination_error3'
2024-07-08T02:05:55,410   adding 'skbio/io/format/tests/data/ordination_error4'
2024-07-08T02:05:55,412   adding 'skbio/io/format/tests/data/ordination_error5'
2024-07-08T02:05:55,413   adding 'skbio/io/format/tests/data/ordination_error6'
2024-07-08T02:05:55,415   adding 'skbio/io/format/tests/data/ordination_error7'
2024-07-08T02:05:55,416   adding 'skbio/io/format/tests/data/ordination_error8'
2024-07-08T02:05:55,417   adding 'skbio/io/format/tests/data/ordination_error9'
2024-07-08T02:05:55,418   adding 'skbio/io/format/tests/data/ordination_example2_scores'
2024-07-08T02:05:55,420   adding 'skbio/io/format/tests/data/ordination_example3_scores'
2024-07-08T02:05:55,421   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site'
2024-07-08T02:05:55,423   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints'
2024-07-08T02:05:55,424   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species'
2024-07-08T02:05:55,425   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site'
2024-07-08T02:05:55,427   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site'
2024-07-08T02:05:55,428   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints'
2024-07-08T02:05:55,429   adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species'
2024-07-08T02:05:55,430   adding 'skbio/io/format/tests/data/phylip_dna_3_seqs'
2024-07-08T02:05:55,432   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header'
2024-07-08T02:05:55,433   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header'
2024-07-08T02:05:55,434   adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs'
2024-07-08T02:05:55,435   adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long'
2024-07-08T02:05:55,436   adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short'
2024-07-08T02:05:55,437   adding 'skbio/io/format/tests/data/phylip_invalid_no_header'
2024-07-08T02:05:55,438   adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long'
2024-07-08T02:05:55,439   adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short'
2024-07-08T02:05:55,441   adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs'
2024-07-08T02:05:55,442   adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs'
2024-07-08T02:05:55,443   adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len'
2024-07-08T02:05:55,444   adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs'
2024-07-08T02:05:55,445   adding 'skbio/io/format/tests/data/phylip_single_seq_long'
2024-07-08T02:05:55,446   adding 'skbio/io/format/tests/data/phylip_single_seq_short'
2024-07-08T02:05:55,447   adding 'skbio/io/format/tests/data/phylip_two_chunks'
2024-07-08T02:05:55,448   adding 'skbio/io/format/tests/data/phylip_variable_length_ids'
2024-07-08T02:05:55,450   adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs'
2024-07-08T02:05:55,451   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1'
2024-07-08T02:05:55,452   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2'
2024-07-08T02:05:55,453   adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3'
2024-07-08T02:05:55,492   adding 'skbio/io/format/tests/data/prot.emb'
2024-07-08T02:05:55,496   adding 'skbio/io/format/tests/data/prot_vec.emb'
2024-07-08T02:05:55,497   adding 'skbio/io/format/tests/data/qseq_invalid_filter'
2024-07-08T02:05:55,498   adding 'skbio/io/format/tests/data/qseq_invalid_lane'
2024-07-08T02:05:55,499   adding 'skbio/io/format/tests/data/qseq_invalid_read'
2024-07-08T02:05:55,501   adding 'skbio/io/format/tests/data/qseq_invalid_tile'
2024-07-08T02:05:55,502   adding 'skbio/io/format/tests/data/qseq_invalid_x'
2024-07-08T02:05:55,503   adding 'skbio/io/format/tests/data/qseq_invalid_y'
2024-07-08T02:05:55,504   adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3'
2024-07-08T02:05:55,505   adding 'skbio/io/format/tests/data/qseq_single_seq_sanger'
2024-07-08T02:05:55,506   adding 'skbio/io/format/tests/data/qual_2_seqs_defaults'
2024-07-08T02:05:55,507   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults'
2024-07-08T02:05:55,508   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch'
2024-07-08T02:05:55,510   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra'
2024-07-08T02:05:55,511   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch'
2024-07-08T02:05:55,512   adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch'
2024-07-08T02:05:55,513   adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults'
2024-07-08T02:05:55,514   adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file'
2024-07-08T02:05:55,515   adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file'
2024-07-08T02:05:55,516   adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file'
2024-07-08T02:05:55,518   adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file'
2024-07-08T02:05:55,519   adding 'skbio/io/format/tests/data/qual_blank_lines_between_records'
2024-07-08T02:05:55,520   adding 'skbio/io/format/tests/data/qual_blanks_end_of_file'
2024-07-08T02:05:55,521   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str'
2024-07-08T02:05:55,522   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char'
2024-07-08T02:05:55,523   adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none'
2024-07-08T02:05:55,524   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str'
2024-07-08T02:05:55,526   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char'
2024-07-08T02:05:55,527   adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none'
2024-07-08T02:05:55,528   adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header'
2024-07-08T02:05:55,529   adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq'
2024-07-08T02:05:55,530   adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence'
2024-07-08T02:05:55,531   adding 'skbio/io/format/tests/data/qual_invalid_legacy_format'
2024-07-08T02:05:55,532   adding 'skbio/io/format/tests/data/qual_invalid_missing_header'
2024-07-08T02:05:55,533   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first'
2024-07-08T02:05:55,535   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last'
2024-07-08T02:05:55,536   adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle'
2024-07-08T02:05:55,537   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float'
2024-07-08T02:05:55,538   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative'
2024-07-08T02:05:55,539   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255'
2024-07-08T02:05:55,540   adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string'
2024-07-08T02:05:55,541   adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq'
2024-07-08T02:05:55,543   adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence'
2024-07-08T02:05:55,544   adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header'
2024-07-08T02:05:55,545   adding 'skbio/io/format/tests/data/qual_max_width_1'
2024-07-08T02:05:55,546   adding 'skbio/io/format/tests/data/qual_max_width_5'
2024-07-08T02:05:55,547   adding 'skbio/io/format/tests/data/qual_multi_seq'
2024-07-08T02:05:55,548   adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip'
2024-07-08T02:05:55,549   adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels'
2024-07-08T02:05:55,551   adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults'
2024-07-08T02:05:55,552   adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults'
2024-07-08T02:05:55,553   adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults'
2024-07-08T02:05:55,554   adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults'
2024-07-08T02:05:55,555   adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults'
2024-07-08T02:05:55,556   adding 'skbio/io/format/tests/data/qual_single_seq'
2024-07-08T02:05:55,557   adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type'
2024-07-08T02:05:55,558   adding 'skbio/io/format/tests/data/qual_ws_lines_between_records'
2024-07-08T02:05:55,560   adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file'
2024-07-08T02:05:55,561   adding 'skbio/io/format/tests/data/sample-metadata-comments-comment-char-id.tsv'
2024-07-08T02:05:55,562   adding 'skbio/io/format/tests/data/sample-metadata-comments-mixed-case.tsv'
2024-07-08T02:05:55,563   adding 'skbio/io/format/tests/data/sample-metadata-comments.tsv'
2024-07-08T02:05:55,564   adding 'skbio/io/format/tests/data/sample-metadata-complete-types-directive.tsv'
2024-07-08T02:05:55,566   adding 'skbio/io/format/tests/data/sample-metadata-empty-rows.tsv'
2024-07-08T02:05:55,567   adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace-split-id.tsv'
2024-07-08T02:05:55,568   adding 'skbio/io/format/tests/data/sample-metadata-leading-trailing-whitespace.tsv'
2024-07-08T02:05:55,569   adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq'
2024-07-08T02:05:55,570   adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq'
2024-07-08T02:05:55,571   adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq'
2024-07-08T02:05:55,573   adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq'
2024-07-08T02:05:55,574   adding 'skbio/io/format/tests/data/stockholm_all_data_types'
2024-07-08T02:05:55,575   adding 'skbio/io/format/tests/data/stockholm_blank_lines'
2024-07-08T02:05:55,576   adding 'skbio/io/format/tests/data/stockholm_data_only'
2024-07-08T02:05:55,577   adding 'skbio/io/format/tests/data/stockholm_different_padding'
2024-07-08T02:05:55,579   adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length'
2024-07-08T02:05:55,580   adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length'
2024-07-08T02:05:55,581   adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths'
2024-07-08T02:05:55,582   adding 'skbio/io/format/tests/data/stockholm_duplicate_gc'
2024-07-08T02:05:55,583   adding 'skbio/io/format/tests/data/stockholm_duplicate_gr'
2024-07-08T02:05:55,584   adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names'
2024-07-08T02:05:55,585   adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids'
2024-07-08T02:05:55,587   adding 'skbio/io/format/tests/data/stockholm_extensive'
2024-07-08T02:05:55,588   adding 'skbio/io/format/tests/data/stockholm_extensive_mixed'
2024-07-08T02:05:55,589   adding 'skbio/io/format/tests/data/stockholm_invalid_data_type'
2024-07-08T02:05:55,590   adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr'
2024-07-08T02:05:55,591   adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs'
2024-07-08T02:05:55,593   adding 'skbio/io/format/tests/data/stockholm_malformed_data_line'
2024-07-08T02:05:55,594   adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line'
2024-07-08T02:05:55,595   adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line'
2024-07-08T02:05:55,596   adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line'
2024-07-08T02:05:55,597   adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line'
2024-07-08T02:05:55,598   adding 'skbio/io/format/tests/data/stockholm_metadata_only'
2024-07-08T02:05:55,599   adding 'skbio/io/format/tests/data/stockholm_minimal'
2024-07-08T02:05:55,600   adding 'skbio/io/format/tests/data/stockholm_missing_footer'
2024-07-08T02:05:55,601   adding 'skbio/io/format/tests/data/stockholm_missing_header'
2024-07-08T02:05:55,603   adding 'skbio/io/format/tests/data/stockholm_missing_reference_items'
2024-07-08T02:05:55,604   adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag'
2024-07-08T02:05:55,605   adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id'
2024-07-08T02:05:55,606   adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id'
2024-07-08T02:05:55,607   adding 'skbio/io/format/tests/data/stockholm_multiple_msa'
2024-07-08T02:05:55,608   adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees'
2024-07-08T02:05:55,609   adding 'skbio/io/format/tests/data/stockholm_multiple_references'
2024-07-08T02:05:55,610   adding 'skbio/io/format/tests/data/stockholm_multiple_trees'
2024-07-08T02:05:55,612   adding 'skbio/io/format/tests/data/stockholm_no_data'
2024-07-08T02:05:55,613   adding 'skbio/io/format/tests/data/stockholm_nonstring_labels'
2024-07-08T02:05:55,614   adding 'skbio/io/format/tests/data/stockholm_rna'
2024-07-08T02:05:55,615   adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace'
2024-07-08T02:05:55,616   adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace'
2024-07-08T02:05:55,617   adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace'
2024-07-08T02:05:55,619   adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace'
2024-07-08T02:05:55,620   adding 'skbio/io/format/tests/data/stockholm_runon_references'
2024-07-08T02:05:55,621   adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed'
2024-07-08T02:05:55,622   adding 'skbio/io/format/tests/data/stockholm_single_reference'
2024-07-08T02:05:55,623   adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id'
2024-07-08T02:05:55,624   adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id'
2024-07-08T02:05:55,626   adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata'
2024-07-08T02:05:55,627   adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines'
2024-07-08T02:05:55,628   adding 'skbio/io/format/tests/data/taxdump_names.dmp'
2024-07-08T02:05:55,629   adding 'skbio/io/format/tests/data/taxdump_nodes.dmp'
2024-07-08T02:05:55,630   adding 'skbio/io/format/tests/data/tsv_10_fields'
2024-07-08T02:05:55,631   adding 'skbio/io/format/tests/data/tsv_8_fields'
2024-07-08T02:05:55,633   adding 'skbio/io/format/tests/data/whitespace_only'
2024-07-08T02:05:55,634   adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq'
2024-07-08T02:05:55,635   adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq'
2024-07-08T02:05:55,636   adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq'
2024-07-08T02:05:55,638   adding 'skbio/io/tests/__init__.py'
2024-07-08T02:05:55,639   adding 'skbio/io/tests/test_iosources.py'
2024-07-08T02:05:55,644   adding 'skbio/io/tests/test_registry.py'
2024-07-08T02:05:55,647   adding 'skbio/io/tests/test_util.py'
2024-07-08T02:05:55,649   adding 'skbio/io/tests/data/big5_file'
2024-07-08T02:05:55,650   adding 'skbio/io/tests/data/big5_file.bz2'
2024-07-08T02:05:55,651   adding 'skbio/io/tests/data/big5_file.gz'
2024-07-08T02:05:55,652   adding 'skbio/io/tests/data/example_file'
2024-07-08T02:05:55,653   adding 'skbio/io/tests/data/example_file.bz2'
2024-07-08T02:05:55,654   adding 'skbio/io/tests/data/example_file.gz'
2024-07-08T02:05:55,656   adding 'skbio/io/tests/data/real_file'
2024-07-08T02:05:55,657   adding 'skbio/io/tests/data/real_file_2'
2024-07-08T02:05:55,659   adding 'skbio/metadata/__init__.py'
2024-07-08T02:05:55,660   adding 'skbio/metadata/_enan.py'
2024-07-08T02:05:55,817   adding 'skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so'
2024-07-08T02:05:55,827   adding 'skbio/metadata/_interval.py'
2024-07-08T02:05:55,832   adding 'skbio/metadata/_metadata.py'
2024-07-08T02:05:55,835   adding 'skbio/metadata/_mixin.py'
2024-07-08T02:05:55,836   adding 'skbio/metadata/_repr.py'
2024-07-08T02:05:55,840   adding 'skbio/metadata/_testing.py'
2024-07-08T02:05:55,842   adding 'skbio/metadata/base.py'
2024-07-08T02:05:55,845   adding 'skbio/metadata/io.py'
2024-07-08T02:05:55,846   adding 'skbio/metadata/missing.py'
2024-07-08T02:05:55,848   adding 'skbio/metadata/tests/__init__.py'
2024-07-08T02:05:55,849   adding 'skbio/metadata/tests/test_enan.py'
2024-07-08T02:05:55,851   adding 'skbio/metadata/tests/test_intersection.py'
2024-07-08T02:05:55,854   adding 'skbio/metadata/tests/test_interval.py'
2024-07-08T02:05:55,858   adding 'skbio/metadata/tests/test_io.py'
2024-07-08T02:05:55,862   adding 'skbio/metadata/tests/test_metadata.py'
2024-07-08T02:05:55,865   adding 'skbio/metadata/tests/test_metadata_column.py'
2024-07-08T02:05:55,866   adding 'skbio/metadata/tests/test_missing.py'
2024-07-08T02:05:55,868   adding 'skbio/metadata/tests/test_mixin.py'
2024-07-08T02:05:55,870   adding 'skbio/metadata/tests/data/invalid/column-name-conflicts-with-id-header.tsv'
2024-07-08T02:05:55,871   adding 'skbio/metadata/tests/data/invalid/comments-and-empty-rows-only.tsv'
2024-07-08T02:05:55,872   adding 'skbio/metadata/tests/data/invalid/data-longer-than-header.tsv'
2024-07-08T02:05:55,873   adding 'skbio/metadata/tests/data/invalid/directive-after-directives-section.tsv'
2024-07-08T02:05:55,875   adding 'skbio/metadata/tests/data/invalid/directive-before-header.tsv'
2024-07-08T02:05:55,876   adding 'skbio/metadata/tests/data/invalid/directive-longer-than-header.tsv'
2024-07-08T02:05:55,877   adding 'skbio/metadata/tests/data/invalid/duplicate-column-names-with-whitespace.tsv'
2024-07-08T02:05:55,878   adding 'skbio/metadata/tests/data/invalid/duplicate-column-names.tsv'
2024-07-08T02:05:55,879   adding 'skbio/metadata/tests/data/invalid/duplicate-directives.tsv'
2024-07-08T02:05:55,880   adding 'skbio/metadata/tests/data/invalid/duplicate-ids-with-whitespace.tsv'
2024-07-08T02:05:55,881   adding 'skbio/metadata/tests/data/invalid/duplicate-ids.tsv'
2024-07-08T02:05:55,882   adding 'skbio/metadata/tests/data/invalid/empty-column-name.tsv'
2024-07-08T02:05:55,883   adding 'skbio/metadata/tests/data/invalid/empty-file'
2024-07-08T02:05:55,885   adding 'skbio/metadata/tests/data/invalid/empty-id.tsv'
2024-07-08T02:05:55,886   adding 'skbio/metadata/tests/data/invalid/header-only-with-comments-and-empty-rows.tsv'
2024-07-08T02:05:55,887   adding 'skbio/metadata/tests/data/invalid/header-only.tsv'
2024-07-08T02:05:55,888   adding 'skbio/metadata/tests/data/invalid/id-conflicts-with-id-header.tsv'
2024-07-08T02:05:55,890   adding 'skbio/metadata/tests/data/invalid/invalid-header.tsv'
2024-07-08T02:05:55,891   adding 'skbio/metadata/tests/data/invalid/missing-unknown-scheme.tsv'
2024-07-08T02:05:55,892   adding 'skbio/metadata/tests/data/invalid/non-utf-8.tsv'
2024-07-08T02:05:55,893   adding 'skbio/metadata/tests/data/invalid/qiime1-empty.tsv'
2024-07-08T02:05:55,894   adding 'skbio/metadata/tests/data/invalid/simple-utf-16be.txt'
2024-07-08T02:05:55,895   adding 'skbio/metadata/tests/data/invalid/simple-utf-16le.txt'
2024-07-08T02:05:55,896   adding 'skbio/metadata/tests/data/invalid/types-directive-non-numeric.tsv'
2024-07-08T02:05:55,898   adding 'skbio/metadata/tests/data/invalid/unrecognized-column-type.tsv'
2024-07-08T02:05:55,899   adding 'skbio/metadata/tests/data/invalid/unrecognized-directive.tsv'
2024-07-08T02:05:55,900   adding 'skbio/metadata/tests/data/invalid/whitespace-only-column-name.tsv'
2024-07-08T02:05:55,901   adding 'skbio/metadata/tests/data/invalid/whitespace-only-id.tsv'
2024-07-08T02:05:55,903   adding 'skbio/metadata/tests/data/valid/BOM-simple.txt'
2024-07-08T02:05:55,904   adding 'skbio/metadata/tests/data/valid/all-cells-padded.tsv'
2024-07-08T02:05:55,905   adding 'skbio/metadata/tests/data/valid/biom-observation-metadata.tsv'
2024-07-08T02:05:55,907   adding 'skbio/metadata/tests/data/valid/case-insensitive-types-directive.tsv'
2024-07-08T02:05:55,908   adding 'skbio/metadata/tests/data/valid/column-order.tsv'
2024-07-08T02:05:55,909   adding 'skbio/metadata/tests/data/valid/comments.tsv'
2024-07-08T02:05:55,910   adding 'skbio/metadata/tests/data/valid/complete-types-directive.tsv'
2024-07-08T02:05:55,912   adding 'skbio/metadata/tests/data/valid/complete-types-directive_w_sk.tsv'
2024-07-08T02:05:55,913   adding 'skbio/metadata/tests/data/valid/empty-rows.tsv'
2024-07-08T02:05:55,914   adding 'skbio/metadata/tests/data/valid/empty-types-directive.tsv'
2024-07-08T02:05:55,915   adding 'skbio/metadata/tests/data/valid/jagged-trailing-columns.tsv'
2024-07-08T02:05:55,916   adding 'skbio/metadata/tests/data/valid/jagged.tsv'
2024-07-08T02:05:55,917   adding 'skbio/metadata/tests/data/valid/leading-trailing-whitespace.tsv'
2024-07-08T02:05:55,918   adding 'skbio/metadata/tests/data/valid/mac-line-endings.tsv'
2024-07-08T02:05:55,920   adding 'skbio/metadata/tests/data/valid/minimal.tsv'
2024-07-08T02:05:55,921   adding 'skbio/metadata/tests/data/valid/missing-data.tsv'
2024-07-08T02:05:55,922   adding 'skbio/metadata/tests/data/valid/missing-insdc-no-directive.tsv'
2024-07-08T02:05:55,923   adding 'skbio/metadata/tests/data/valid/missing-insdc.tsv'
2024-07-08T02:05:55,924   adding 'skbio/metadata/tests/data/valid/no-columns.tsv'
2024-07-08T02:05:55,925   adding 'skbio/metadata/tests/data/valid/no-id-or-column-name-type-cast.tsv'
2024-07-08T02:05:55,926   adding 'skbio/metadata/tests/data/valid/no-newline-at-eof.tsv'
2024-07-08T02:05:55,928   adding 'skbio/metadata/tests/data/valid/non-standard-characters.tsv'
2024-07-08T02:05:55,929   adding 'skbio/metadata/tests/data/valid/numeric-column.tsv'
2024-07-08T02:05:55,930   adding 'skbio/metadata/tests/data/valid/override-insdc.tsv'
2024-07-08T02:05:55,931   adding 'skbio/metadata/tests/data/valid/partial-types-directive.tsv'
2024-07-08T02:05:55,932   adding 'skbio/metadata/tests/data/valid/qiime1.tsv'
2024-07-08T02:05:55,933   adding 'skbio/metadata/tests/data/valid/qiita-preparation-information.tsv'
2024-07-08T02:05:55,934   adding 'skbio/metadata/tests/data/valid/qiita-sample-information.tsv'
2024-07-08T02:05:55,936   adding 'skbio/metadata/tests/data/valid/recommended-ids.tsv'
2024-07-08T02:05:55,937   adding 'skbio/metadata/tests/data/valid/rows-shorter-than-header.tsv'
2024-07-08T02:05:55,938   adding 'skbio/metadata/tests/data/valid/simple-with-directive.tsv'
2024-07-08T02:05:55,939   adding 'skbio/metadata/tests/data/valid/simple.tsv'
2024-07-08T02:05:55,940   adding 'skbio/metadata/tests/data/valid/simple.txt'
2024-07-08T02:05:55,941   adding 'skbio/metadata/tests/data/valid/single-column.tsv'
2024-07-08T02:05:55,942   adding 'skbio/metadata/tests/data/valid/single-id.tsv'
2024-07-08T02:05:55,943   adding 'skbio/metadata/tests/data/valid/trailing-columns.tsv'
2024-07-08T02:05:55,944   adding 'skbio/metadata/tests/data/valid/unix-line-endings.tsv'
2024-07-08T02:05:55,945   adding 'skbio/metadata/tests/data/valid/windows-line-endings.tsv'
2024-07-08T02:05:55,948   adding 'skbio/sequence/__init__.py'
2024-07-08T02:05:55,950   adding 'skbio/sequence/_alphabet.py'
2024-07-08T02:05:55,952   adding 'skbio/sequence/_dna.py'
2024-07-08T02:05:55,955   adding 'skbio/sequence/_genetic_code.py'
2024-07-08T02:05:55,958   adding 'skbio/sequence/_grammared_sequence.py'
2024-07-08T02:05:55,960   adding 'skbio/sequence/_nucleotide_mixin.py'
2024-07-08T02:05:55,962   adding 'skbio/sequence/_protein.py'
2024-07-08T02:05:55,964   adding 'skbio/sequence/_repr.py'
2024-07-08T02:05:55,966   adding 'skbio/sequence/_rna.py'
2024-07-08T02:05:55,975   adding 'skbio/sequence/_sequence.py'
2024-07-08T02:05:55,979   adding 'skbio/sequence/_substitution.py'
2024-07-08T02:05:55,981   adding 'skbio/sequence/distance.py'
2024-07-08T02:05:55,983   adding 'skbio/sequence/tests/__init__.py'
2024-07-08T02:05:55,984   adding 'skbio/sequence/tests/test_alphabet.py'
2024-07-08T02:05:55,986   adding 'skbio/sequence/tests/test_distance.py'
2024-07-08T02:05:55,987   adding 'skbio/sequence/tests/test_dna.py'
2024-07-08T02:05:55,989   adding 'skbio/sequence/tests/test_genetic_code.py'
2024-07-08T02:05:55,992   adding 'skbio/sequence/tests/test_grammared_sequence.py'
2024-07-08T02:05:55,995   adding 'skbio/sequence/tests/test_nucleotide_sequences.py'
2024-07-08T02:05:55,996   adding 'skbio/sequence/tests/test_protein.py'
2024-07-08T02:05:55,998   adding 'skbio/sequence/tests/test_rna.py'
2024-07-08T02:05:56,007   adding 'skbio/sequence/tests/test_sequence.py'
2024-07-08T02:05:56,009   adding 'skbio/sequence/tests/test_substitution.py'
2024-07-08T02:05:56,011   adding 'skbio/stats/__init__.py'
2024-07-08T02:05:56,012   adding 'skbio/stats/_misc.py'
2024-07-08T02:05:56,014   adding 'skbio/stats/_subsample.py'
2024-07-08T02:05:56,022   adding 'skbio/stats/composition.py'
2024-07-08T02:05:56,026   adding 'skbio/stats/gradient.py'
2024-07-08T02:05:56,032   adding 'skbio/stats/power.py'
2024-07-08T02:05:56,035   adding 'skbio/stats/distance/__init__.py'
2024-07-08T02:05:56,036   adding 'skbio/stats/distance/_anosim.py'
2024-07-08T02:05:56,042   adding 'skbio/stats/distance/_base.py'
2024-07-08T02:05:56,044   adding 'skbio/stats/distance/_bioenv.py'
2024-07-08T02:05:56,403   adding 'skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so'
2024-07-08T02:05:56,418   adding 'skbio/stats/distance/_mantel.py'
2024-07-08T02:05:56,420   adding 'skbio/stats/distance/_permanova.py'
2024-07-08T02:05:56,422   adding 'skbio/stats/distance/_permdisp.py'
2024-07-08T02:05:56,424   adding 'skbio/stats/distance/_utils.py'
2024-07-08T02:05:56,426   adding 'skbio/stats/distance/tests/__init__.py'
2024-07-08T02:05:56,427   adding 'skbio/stats/distance/tests/test_anosim.py'
2024-07-08T02:05:56,432   adding 'skbio/stats/distance/tests/test_base.py'
2024-07-08T02:05:56,434   adding 'skbio/stats/distance/tests/test_bioenv.py'
2024-07-08T02:05:56,437   adding 'skbio/stats/distance/tests/test_mantel.py'
2024-07-08T02:05:56,439   adding 'skbio/stats/distance/tests/test_permanova.py'
2024-07-08T02:05:56,441   adding 'skbio/stats/distance/tests/test_permdisp.py'
2024-07-08T02:05:56,443   adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt'
2024-07-08T02:05:56,445   adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt'
2024-07-08T02:05:56,446   adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt'
2024-07-08T02:05:56,447   adding 'skbio/stats/distance/tests/data/df.txt'
2024-07-08T02:05:56,448   adding 'skbio/stats/distance/tests/data/df_extra_column.txt'
2024-07-08T02:05:56,450   adding 'skbio/stats/distance/tests/data/dm.txt'
2024-07-08T02:05:56,451   adding 'skbio/stats/distance/tests/data/dm2.txt'
2024-07-08T02:05:56,452   adding 'skbio/stats/distance/tests/data/dm3.txt'
2024-07-08T02:05:56,453   adding 'skbio/stats/distance/tests/data/dm4.txt'
2024-07-08T02:05:56,454   adding 'skbio/stats/distance/tests/data/dm_reordered.txt'
2024-07-08T02:05:56,456   adding 'skbio/stats/distance/tests/data/exp_results.txt'
2024-07-08T02:05:56,457   adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt'
2024-07-08T02:05:56,458   adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt'
2024-07-08T02:05:56,463   adding 'skbio/stats/distance/tests/data/frameSeries_dm.tsv'
2024-07-08T02:05:56,464   adding 'skbio/stats/distance/tests/data/frameSeries_grouping.tsv'
2024-07-08T02:05:56,466   adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt'
2024-07-08T02:05:56,468   adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt'
2024-07-08T02:05:56,471   adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv'
2024-07-08T02:05:56,473   adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv'
2024-07-08T02:05:56,474   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt'
2024-07-08T02:05:56,475   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt'
2024-07-08T02:05:56,476   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt'
2024-07-08T02:05:56,477   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt'
2024-07-08T02:05:56,478   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt'
2024-07-08T02:05:56,480   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt'
2024-07-08T02:05:56,481   adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt'
2024-07-08T02:05:56,483   adding 'skbio/stats/evolve/__init__.py'
2024-07-08T02:05:56,485   adding 'skbio/stats/evolve/_hommola.py'
2024-07-08T02:05:56,487   adding 'skbio/stats/evolve/tests/__init__.py'
2024-07-08T02:05:56,489   adding 'skbio/stats/evolve/tests/test_hommola.py'
2024-07-08T02:05:56,491   adding 'skbio/stats/ordination/__init__.py'
2024-07-08T02:05:56,493   adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py'
2024-07-08T02:05:56,495   adding 'skbio/stats/ordination/_correspondence_analysis.py'
2024-07-08T02:05:56,767   adding 'skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so'
2024-07-08T02:05:56,779   adding 'skbio/stats/ordination/_ordination_results.py'
2024-07-08T02:05:56,781   adding 'skbio/stats/ordination/_principal_coordinate_analysis.py'
2024-07-08T02:05:56,783   adding 'skbio/stats/ordination/_redundancy_analysis.py'
2024-07-08T02:05:56,785   adding 'skbio/stats/ordination/_utils.py'
2024-07-08T02:05:56,787   adding 'skbio/stats/ordination/tests/__init__.py'
2024-07-08T02:05:56,788   adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py'
2024-07-08T02:05:56,790   adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py'
2024-07-08T02:05:56,792   adding 'skbio/stats/ordination/tests/test_ordination_results.py'
2024-07-08T02:05:56,794   adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py'
2024-07-08T02:05:56,796   adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py'
2024-07-08T02:05:56,802   adding 'skbio/stats/ordination/tests/test_util.py'
2024-07-08T02:05:56,804   adding 'skbio/stats/ordination/tests/data/L&L_CA_data'
2024-07-08T02:05:56,805   adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors'
2024-07-08T02:05:56,806   adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors'
2024-07-08T02:05:56,808   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data'
2024-07-08T02:05:56,809   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim'
2024-07-08T02:05:56,810   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2'
2024-07-08T02:05:56,812   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3'
2024-07-08T02:05:56,813   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim'
2024-07-08T02:05:56,814   adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim'
2024-07-08T02:05:56,816   adding 'skbio/stats/ordination/tests/data/PCoA_skbio'
2024-07-08T02:05:56,817   adding 'skbio/stats/ordination/tests/data/example2_X'
2024-07-08T02:05:56,818   adding 'skbio/stats/ordination/tests/data/example2_Y'
2024-07-08T02:05:56,819   adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1'
2024-07-08T02:05:56,820   adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2'
2024-07-08T02:05:56,822   adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1'
2024-07-08T02:05:56,823   adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2'
2024-07-08T02:05:56,824   adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan'
2024-07-08T02:05:56,825   adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan'
2024-07-08T02:05:56,826   adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan'
2024-07-08T02:05:56,827   adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan'
2024-07-08T02:05:56,829   adding 'skbio/stats/ordination/tests/data/example3_X'
2024-07-08T02:05:56,830   adding 'skbio/stats/ordination/tests/data/example3_Y'
2024-07-08T02:05:56,831   adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1'
2024-07-08T02:05:56,832   adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2'
2024-07-08T02:05:56,834   adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1'
2024-07-08T02:05:56,835   adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2'
2024-07-08T02:05:56,836   adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan'
2024-07-08T02:05:56,837   adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan'
2024-07-08T02:05:56,839   adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan'
2024-07-08T02:05:56,840   adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan'
2024-07-08T02:05:56,841   adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site'
2024-07-08T02:05:56,843   adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site'
2024-07-08T02:05:56,844   adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv'
2024-07-08T02:05:56,845   adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv'
2024-07-08T02:05:56,847   adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv'
2024-07-08T02:05:56,848   adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv'
2024-07-08T02:05:56,849   adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv'
2024-07-08T02:05:56,851   adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv'
2024-07-08T02:05:56,852   adding 'skbio/stats/ordination/tests/data/varechem.csv'
2024-07-08T02:05:56,854   adding 'skbio/stats/ordination/tests/data/varespec.csv'
2024-07-08T02:05:56,856   adding 'skbio/stats/tests/__init__.py'
2024-07-08T02:05:56,861   adding 'skbio/stats/tests/test_composition.py'
2024-07-08T02:05:56,865   adding 'skbio/stats/tests/test_gradient.py'
2024-07-08T02:05:56,866   adding 'skbio/stats/tests/test_misc.py'
2024-07-08T02:05:56,869   adding 'skbio/stats/tests/test_power.py'
2024-07-08T02:05:56,870   adding 'skbio/stats/tests/test_subsample.py'
2024-07-08T02:05:56,872   adding 'skbio/stats/tests/data/cr_data_out'
2024-07-08T02:05:56,873   adding 'skbio/stats/tests/data/cr_data_raw'
2024-07-08T02:05:56,874   adding 'skbio/stats/tests/data/cr_no_data_out'
2024-07-08T02:05:56,876   adding 'skbio/stats/tests/data/cr_no_data_raw'
2024-07-08T02:05:56,877   adding 'skbio/stats/tests/data/gr_w_msg_out'
2024-07-08T02:05:56,878   adding 'skbio/stats/tests/data/gr_w_msg_raw'
2024-07-08T02:05:56,879   adding 'skbio/stats/tests/data/gr_wo_msg_out'
2024-07-08T02:05:56,880   adding 'skbio/stats/tests/data/gr_wo_msg_raw'
2024-07-08T02:05:56,882   adding 'skbio/stats/tests/data/vr_out'
2024-07-08T02:05:56,883   adding 'skbio/stats/tests/data/vr_raw'
2024-07-08T02:05:56,884   adding 'skbio/stats/tests/data/vr_real_out'
2024-07-08T02:05:56,885   adding 'skbio/stats/tests/data/vr_real_raw'
2024-07-08T02:05:56,887   adding 'skbio/table/__init__.py'
2024-07-08T02:05:56,888   adding 'skbio/table/_base.py'
2024-07-08T02:05:56,890   adding 'skbio/table/tests/__init__.py'
2024-07-08T02:05:56,891   adding 'skbio/table/tests/test_base.py'
2024-07-08T02:05:56,893   adding 'skbio/tests/__init__.py'
2024-07-08T02:05:56,894   adding 'skbio/tests/test_base.py'
2024-07-08T02:05:56,896   adding 'skbio/tests/test_workflow.py'
2024-07-08T02:05:56,898   adding 'skbio/tree/__init__.py'
2024-07-08T02:05:56,899   adding 'skbio/tree/_exception.py'
2024-07-08T02:05:56,901   adding 'skbio/tree/_majority_rule.py'
2024-07-08T02:05:56,905   adding 'skbio/tree/_nj.py'
2024-07-08T02:05:56,919   adding 'skbio/tree/_tree.py'
2024-07-08T02:05:56,922   adding 'skbio/tree/tests/__init__.py'
2024-07-08T02:05:56,923   adding 'skbio/tree/tests/test_majority_rule.py'
2024-07-08T02:05:56,926   adding 'skbio/tree/tests/test_nj.py'
2024-07-08T02:05:56,933   adding 'skbio/tree/tests/test_tree.py'
2024-07-08T02:05:56,936   adding 'skbio/util/__init__.py'
2024-07-08T02:05:56,937   adding 'skbio/util/_decorator.py'
2024-07-08T02:05:56,938   adding 'skbio/util/_exception.py'
2024-07-08T02:05:56,940   adding 'skbio/util/_misc.py'
2024-07-08T02:05:56,941   adding 'skbio/util/_plotting.py'
2024-07-08T02:05:56,944   adding 'skbio/util/_testing.py'
2024-07-08T02:05:56,945   adding 'skbio/util/_warning.py'
2024-07-08T02:05:56,947   adding 'skbio/util/tests/__init__.py'
2024-07-08T02:05:56,948   adding 'skbio/util/tests/test_decorator.py'
2024-07-08T02:05:56,950   adding 'skbio/util/tests/test_misc.py'
2024-07-08T02:05:56,951   adding 'skbio/util/tests/test_plotting.py'
2024-07-08T02:05:56,953   adding 'skbio/util/tests/test_testing.py'
2024-07-08T02:05:56,954   adding 'scikit_bio-0.6.2.dist-info/LICENSE.txt'
2024-07-08T02:05:56,956   adding 'scikit_bio-0.6.2.dist-info/METADATA'
2024-07-08T02:05:56,957   adding 'scikit_bio-0.6.2.dist-info/WHEEL'
2024-07-08T02:05:56,958   adding 'scikit_bio-0.6.2.dist-info/top_level.txt'
2024-07-08T02:05:56,971   adding 'scikit_bio-0.6.2.dist-info/RECORD'
2024-07-08T02:05:57,036   removing build/bdist.linux-armv7l/wheel
2024-07-08T02:05:58,126   Building wheel for scikit-bio (pyproject.toml): finished with status 'done'
2024-07-08T02:05:58,207   Created wheel for scikit-bio: filename=scikit_bio-0.6.2-cp39-cp39-linux_armv7l.whl size=3966387 sha256=c11cd14b1aa68524f23fa412af6d5139f3023ac63212057c53649ce6a63da7b8
2024-07-08T02:05:58,208   Stored in directory: /tmp/pip-ephem-wheel-cache-ds4xyqno/wheels/77/aa/10/57e5692dc539802da5df5fa39b3b217e7f4d77feccb12f37b9
2024-07-08T02:05:58,245 Successfully built scikit-bio
2024-07-08T02:05:58,353 Removed build tracker: '/tmp/pip-build-tracker-016ky9xm'