2024-07-10T18:43:43,366 Created temporary directory: /tmp/pip-build-tracker-tgnan1dd 2024-07-10T18:43:43,367 Initialized build tracking at /tmp/pip-build-tracker-tgnan1dd 2024-07-10T18:43:43,367 Created build tracker: /tmp/pip-build-tracker-tgnan1dd 2024-07-10T18:43:43,368 Entered build tracker: /tmp/pip-build-tracker-tgnan1dd 2024-07-10T18:43:43,368 Created temporary directory: /tmp/pip-wheel-nrlcn04z 2024-07-10T18:43:43,372 Created temporary directory: /tmp/pip-ephem-wheel-cache-3s0v3etw 2024-07-10T18:43:43,393 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-10T18:43:43,396 2 location(s) to search for versions of nextflow: 2024-07-10T18:43:43,396 * https://pypi.org/simple/nextflow/ 2024-07-10T18:43:43,396 * https://www.piwheels.org/simple/nextflow/ 2024-07-10T18:43:43,397 Fetching project page and analyzing links: https://pypi.org/simple/nextflow/ 2024-07-10T18:43:43,398 Getting page https://pypi.org/simple/nextflow/ 2024-07-10T18:43:43,399 Found index url https://pypi.org/simple/ 2024-07-10T18:43:43,611 Fetched page https://pypi.org/simple/nextflow/ as application/vnd.pypi.simple.v1+json 2024-07-10T18:43:43,615 Found link https://files.pythonhosted.org/packages/d9/3d/162f93ee2c674b19e07782850b8e1044168c3615a9e3e3a9a2d75ad45e8a/nextflow-22.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.1 2024-07-10T18:43:43,615 Found link https://files.pythonhosted.org/packages/0b/00/f6d3c8d84864605147aa79ec17f763fd394f9cfaded672101e3d07bc0345/nextflow-22.10.6.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.6 2024-07-10T18:43:43,616 Found link https://files.pythonhosted.org/packages/f5/e8/e0882a1aad0b30b3ac760ae69914ffe986706f12d6539a1c0a08759d0e2b/nextflow-22.10.7.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.7 2024-07-10T18:43:43,617 Found link https://files.pythonhosted.org/packages/d5/eb/d7cd6b33724ea6c37f8dfd4ed4354a06ed66e8a87bb6c50cca26afa3d210/nextflow-23.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.1 2024-07-10T18:43:43,617 Found link https://files.pythonhosted.org/packages/77/eb/6f5e7d09188ac1fedc1b20c5bb3c679302cda22398c49682f8f3213565db/nextflow-23.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.2 2024-07-10T18:43:43,618 Found link https://files.pythonhosted.org/packages/37/0f/cd4e2d76402ebd60994753df846a4581fe1cd2c5c8ecfad4a0758328edf9/nextflow-23.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.3 2024-07-10T18:43:43,618 Found link https://files.pythonhosted.org/packages/7f/a1/ef4e714fdc8de1cf27f285565feea47eec4c85b96fc9063a07fe8215ef83/nextflow-23.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.4 2024-07-10T18:43:43,619 Found link https://files.pythonhosted.org/packages/5d/28/eb02b1a65c49e3b2dffd9d42e711e0544ee9db637cd4ca43b0c1a64e0eb4/nextflow-23.10.0.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.0 2024-07-10T18:43:43,620 Found link https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.1 2024-07-10T18:43:43,620 Found link https://files.pythonhosted.org/packages/c4/9b/9cfb11bf3e9f51644b177c1ef2c635b11e96aedea5a40fd5839d197de7bd/nextflow-24.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.1 2024-07-10T18:43:43,621 Found link https://files.pythonhosted.org/packages/e3/bd/c2bbb7c09b5c88d1521f40025c5ddec825b5c789f374242afbffba08c84b/nextflow-24.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.2 2024-07-10T18:43:43,622 Found link https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.3 2024-07-10T18:43:43,622 Fetching project page and analyzing links: https://www.piwheels.org/simple/nextflow/ 2024-07-10T18:43:43,623 Getting page https://www.piwheels.org/simple/nextflow/ 2024-07-10T18:43:43,625 Found index url https://www.piwheels.org/simple/ 2024-07-10T18:43:43,795 Fetched page https://www.piwheels.org/simple/nextflow/ as text/html 2024-07-10T18:43:43,799 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.2-py3-none-any.whl#sha256=e7fec3dff6b4f186a445cb5cfc249c17ac0391558a134e26af1ff85c0e55d3ba (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,799 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.1-py3-none-any.whl#sha256=de56fffc2db65488a1756d1230de2fdf75ce97d44ab44bd42e5dcd0587b13987 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,800 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.1-py3-none-any.whl#sha256=81573f00e62309b377e56977d79c506407a4283adeb34ab3ccf025ee1b840b79 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,800 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.0-py3-none-any.whl#sha256=7d68961906a1c33d39660746da229605ecefc580b066c8458ebebf96e563549d (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,801 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.4-py3-none-any.whl#sha256=07d049d85a7b1f1772982e66a45e970378c1b3e4a0aa11e94bff54eea2facfaf (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,801 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.3-py3-none-any.whl#sha256=1d2114b09aec49a7701bb1480ca7ce83e23acd47cdb495a709384efc2a525948 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,802 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.2-py3-none-any.whl#sha256=2056f24035f07ee610923e7a8ec19e52b141789365e337ccf71e27a365a68ce6 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,802 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.1-py3-none-any.whl#sha256=c07e0059e657c9519b9cc0b41d127157c166bf9116bacb750aa5fbf8ef9e9a55 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,803 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.7-py3-none-any.whl#sha256=bd32f54d735936e85cc14b26070f88d5b86f2fda68079680e58d5dcd6472ecdd (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,803 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.6-py3-none-any.whl#sha256=10d80820a116271df8dd0c21f0373823dbf31f40715ebb305d3b85d49f39ad72 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,804 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.1-py3-none-any.whl#sha256=746fe26a0a4083913632e05683071cc2fe41d7780835714a38c1d44116ff9073 (from https://www.piwheels.org/simple/nextflow/) 2024-07-10T18:43:43,805 Skipping link: not a file: https://www.piwheels.org/simple/nextflow/ 2024-07-10T18:43:43,805 Skipping link: not a file: https://pypi.org/simple/nextflow/ 2024-07-10T18:43:43,826 Given no hashes to check 1 links for project 'nextflow': discarding no candidates 2024-07-10T18:43:43,846 Collecting nextflow==24.4.3 2024-07-10T18:43:43,848 Created temporary directory: /tmp/pip-unpack-307_v6_7 2024-07-10T18:43:44,061 Downloading nextflow-24.4.3.tar.gz (7.3 kB) 2024-07-10T18:43:44,086 Added nextflow==24.4.3 from https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz to build tracker '/tmp/pip-build-tracker-tgnan1dd' 2024-07-10T18:43:44,089 Running setup.py (path:/tmp/pip-wheel-nrlcn04z/nextflow_7884a5bca65f4abf9ac5cf99312b251c/setup.py) egg_info for package nextflow 2024-07-10T18:43:44,089 Created temporary directory: /tmp/pip-pip-egg-info-4y8js9tp 2024-07-10T18:43:44,090 Preparing metadata (setup.py): started 2024-07-10T18:43:44,092 Running command python setup.py egg_info 2024-07-10T18:43:45,194 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:318: InformationOnly: Normalizing '24.04.3' to '24.4.3' 2024-07-10T18:43:45,194 self.metadata.version = self._normalize_version(self.metadata.version) 2024-07-10T18:43:45,234 running egg_info 2024-07-10T18:43:45,235 creating /tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info 2024-07-10T18:43:45,259 writing /tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/PKG-INFO 2024-07-10T18:43:45,262 writing dependency_links to /tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/dependency_links.txt 2024-07-10T18:43:45,264 writing top-level names to /tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/top_level.txt 2024-07-10T18:43:45,266 writing manifest file '/tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/SOURCES.txt' 2024-07-10T18:43:45,341 reading manifest file '/tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/SOURCES.txt' 2024-07-10T18:43:45,344 writing manifest file '/tmp/pip-pip-egg-info-4y8js9tp/nextflow.egg-info/SOURCES.txt' 2024-07-10T18:43:45,467 Preparing metadata (setup.py): finished with status 'done' 2024-07-10T18:43:45,471 Source in /tmp/pip-wheel-nrlcn04z/nextflow_7884a5bca65f4abf9ac5cf99312b251c has version 24.4.3, which satisfies requirement nextflow==24.4.3 from https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz 2024-07-10T18:43:45,472 Removed nextflow==24.4.3 from https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz from build tracker '/tmp/pip-build-tracker-tgnan1dd' 2024-07-10T18:43:45,475 Created temporary directory: /tmp/pip-unpack-ycbpyo07 2024-07-10T18:43:45,476 Created temporary directory: /tmp/pip-unpack-1m4dcif2 2024-07-10T18:43:45,479 Building wheels for collected packages: nextflow 2024-07-10T18:43:45,483 Created temporary directory: /tmp/pip-wheel-omee7dpi 2024-07-10T18:43:45,483 Building wheel for nextflow (setup.py): started 2024-07-10T18:43:45,485 Destination directory: /tmp/pip-wheel-omee7dpi 2024-07-10T18:43:45,485 Running command python setup.py bdist_wheel 2024-07-10T18:43:46,552 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:318: InformationOnly: Normalizing '24.04.3' to '24.4.3' 2024-07-10T18:43:46,552 self.metadata.version = self._normalize_version(self.metadata.version) 2024-07-10T18:43:46,584 running bdist_wheel 2024-07-10T18:43:46,681 running build 2024-07-10T18:43:46,682 running build_scripts 2024-07-10T18:43:46,682 creating build 2024-07-10T18:43:46,683 creating build/scripts-3.11 2024-07-10T18:43:46,684 copying launcher/nextflow -> build/scripts-3.11 2024-07-10T18:43:46,686 changing mode of build/scripts-3.11/nextflow from 644 to 755 2024-07-10T18:43:46,712 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-07-10T18:43:46,713 !! 2024-07-10T18:43:46,714 ******************************************************************************** 2024-07-10T18:43:46,714 Please avoid running ``setup.py`` directly. 2024-07-10T18:43:46,715 Instead, use pypa/build, pypa/installer or other 2024-07-10T18:43:46,716 standards-based tools. 2024-07-10T18:43:46,717 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-07-10T18:43:46,717 ******************************************************************************** 2024-07-10T18:43:46,718 !! 2024-07-10T18:43:46,719 self.initialize_options() 2024-07-10T18:43:46,738 installing to build/bdist.linux-armv7l/wheel 2024-07-10T18:43:46,739 running install 2024-07-10T18:43:46,763 running install_egg_info 2024-07-10T18:43:46,853 running egg_info 2024-07-10T18:43:46,877 writing nextflow.egg-info/PKG-INFO 2024-07-10T18:43:46,880 writing dependency_links to nextflow.egg-info/dependency_links.txt 2024-07-10T18:43:46,882 writing top-level names to nextflow.egg-info/top_level.txt 2024-07-10T18:43:46,908 reading manifest file 'nextflow.egg-info/SOURCES.txt' 2024-07-10T18:43:46,911 writing manifest file 'nextflow.egg-info/SOURCES.txt' 2024-07-10T18:43:46,913 Copying nextflow.egg-info to build/bdist.linux-armv7l/wheel/nextflow-24.4.3-py3.11.egg-info 2024-07-10T18:43:46,921 running install_scripts 2024-07-10T18:43:46,922 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.3.data 2024-07-10T18:43:46,922 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.3.data/scripts 2024-07-10T18:43:46,923 copying build/scripts-3.11/nextflow -> build/bdist.linux-armv7l/wheel/nextflow-24.4.3.data/scripts 2024-07-10T18:43:46,925 changing mode of build/bdist.linux-armv7l/wheel/nextflow-24.4.3.data/scripts/nextflow to 755 2024-07-10T18:43:46,935 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.3.dist-info/WHEEL 2024-07-10T18:43:46,937 creating '/tmp/pip-wheel-omee7dpi/nextflow-24.4.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-10T18:43:46,940 adding 'nextflow-24.4.3.data/scripts/nextflow' 2024-07-10T18:43:46,943 adding 'nextflow-24.4.3.dist-info/METADATA' 2024-07-10T18:43:46,944 adding 'nextflow-24.4.3.dist-info/WHEEL' 2024-07-10T18:43:46,944 adding 'nextflow-24.4.3.dist-info/top_level.txt' 2024-07-10T18:43:46,945 adding 'nextflow-24.4.3.dist-info/RECORD' 2024-07-10T18:43:46,946 removing build/bdist.linux-armv7l/wheel 2024-07-10T18:43:47,069 Building wheel for nextflow (setup.py): finished with status 'done' 2024-07-10T18:43:47,071 Created wheel for nextflow: filename=nextflow-24.4.3-py3-none-any.whl size=7414 sha256=939e5cec991c7e0aa855382e5080b22a5a6d4e29ea2fe78489bc82c8efd54618 2024-07-10T18:43:47,073 Stored in directory: /tmp/pip-ephem-wheel-cache-3s0v3etw/wheels/ac/55/b8/df7d5a185010ea4daf653415535f671588055e00b5e76b92df 2024-07-10T18:43:47,081 Successfully built nextflow 2024-07-10T18:43:47,084 Removed build tracker: '/tmp/pip-build-tracker-tgnan1dd'