2024-07-11T14:17:47,327 Created temporary directory: /tmp/pip-build-tracker-vcuzx4jc 2024-07-11T14:17:47,328 Initialized build tracking at /tmp/pip-build-tracker-vcuzx4jc 2024-07-11T14:17:47,329 Created build tracker: /tmp/pip-build-tracker-vcuzx4jc 2024-07-11T14:17:47,329 Entered build tracker: /tmp/pip-build-tracker-vcuzx4jc 2024-07-11T14:17:47,330 Created temporary directory: /tmp/pip-wheel-cw3sxalp 2024-07-11T14:17:47,334 Created temporary directory: /tmp/pip-ephem-wheel-cache-ot409isc 2024-07-11T14:17:47,358 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-11T14:17:47,361 2 location(s) to search for versions of inspirems: 2024-07-11T14:17:47,361 * https://pypi.org/simple/inspirems/ 2024-07-11T14:17:47,361 * https://www.piwheels.org/simple/inspirems/ 2024-07-11T14:17:47,362 Fetching project page and analyzing links: https://pypi.org/simple/inspirems/ 2024-07-11T14:17:47,363 Getting page https://pypi.org/simple/inspirems/ 2024-07-11T14:17:47,365 Found index url https://pypi.org/simple/ 2024-07-11T14:17:47,593 Fetched page https://pypi.org/simple/inspirems/ as application/vnd.pypi.simple.v1+json 2024-07-11T14:17:47,599 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/21/ed/6d393035e39df20a47456d76b0676af2f2e680df2e14ee316d6b7e91a91c/inspirems-1.0-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,600 Found link https://files.pythonhosted.org/packages/97/b0/27d9b88cc43ac59da36ccc3917fea0e67b15fce32f311a564821e54abf11/inspirems-1.0.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.0 2024-07-11T14:17:47,601 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/02/39/9dc410c73a90b2b49831bdbd0a554db0073698c6e787d8bd634f6531e6bc/inspirems-1.1-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,602 Found link https://files.pythonhosted.org/packages/e2/75/6bff101ea099553981964e3d38fa92c28311a05551d4d926d724c094ad13/inspirems-1.1.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.1 2024-07-11T14:17:47,602 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/84/98/1b895ef7993bd7dd2854f6172423f8a660f86cd514f620b1c9cd188c396f/inspirems-1.2-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,604 Found link https://files.pythonhosted.org/packages/7e/10/2b596194d586edb11c4304547f5004a14315701e48851776547ddb38ee36/inspirems-1.2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.2 2024-07-11T14:17:47,604 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/84/a8/652f6d0c69f3eaeb9c463fe03ccfea8975a2d151601a294127e6691080b7/inspirems-1.3-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,606 Found link https://files.pythonhosted.org/packages/2b/b0/2c786759fd8a978c976a5bb8ffb9c42c40fcd1f7ae0dd832394712bd9c23/inspirems-1.3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.3 2024-07-11T14:17:47,606 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/fc/d7/92a4140347196e70f8600b3386d1d7b71fb3573f601b6d56bfb74fa5214a/inspirems-1.4-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,607 Found link https://files.pythonhosted.org/packages/e1/c2/b10b18d40c2c2546303aa8d122748c6b209b6e980a8e4f7ccd237a6f062c/inspirems-1.4.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.4 2024-07-11T14:17:47,608 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/32/9b/3716e6f093acba536938344fda48b635c7ca12df699dc762625463cd3417/inspirems-1.5-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,609 Found link https://files.pythonhosted.org/packages/63/71/7ba53a8886bc6db90be18e1caad685e4a566551eec5c1e0510309e399dda/inspirems-1.5.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.8), version: 1.5 2024-07-11T14:17:47,610 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/b7/c9/8b430128e708a0a97c730b3ceb10541675286bcc59ecf44535451ff90d96/inspirems-2.0rc1-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,611 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/89/10/35b4acef4fa55ee787bbeaf84b62302d8fce5ffe70e40e9533de525a9d2c/inspirems-2.0rc2-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,612 Link requires a different Python (3.11.2 not in: '==3.11'): https://files.pythonhosted.org/packages/00/21/634aeb25deb52b0d77a33866501cdf9720f5afb68120c7ba11c9a1685d4b/inspirems-2.0rc2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,613 Skipping link: 2.0rc2 Requires-Python ==3.11: https://files.pythonhosted.org/packages/00/21/634aeb25deb52b0d77a33866501cdf9720f5afb68120c7ba11c9a1685d4b/inspirems-2.0rc2.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,613 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/3a/31/6d2bb08845252409bb48b03ac6bc9810068804d20d28ee6be9df0eb53f07/inspirems-2.0rc3-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,614 Link requires a different Python (3.11.2 not in: '==3.11'): https://files.pythonhosted.org/packages/2e/5a/da1d4af6dad817df01d1bea247675a2ab472309271c1406121662acadb45/inspirems-2.0rc3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,615 Skipping link: 2.0rc3 Requires-Python ==3.11: https://files.pythonhosted.org/packages/2e/5a/da1d4af6dad817df01d1bea247675a2ab472309271c1406121662acadb45/inspirems-2.0rc3.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:==3.11) 2024-07-11T14:17:47,616 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/d6/e1/2fa7dbf0f30c8c502f62e015ba33d58e6fdb509e68a3e7f73bf4875711ba/inspirems-2.0rc4-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,617 Found link https://files.pythonhosted.org/packages/f6/df/8f42597b188ef51107b3b24df4e950804c13a2c4a388107e40e05bbb4317/inspirems-2.0rc4.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc4 2024-07-11T14:17:47,618 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/5f/77/a3098717d8e9132bcc6d55041165da1a429d3b35a180fb6dee3306237dd9/inspirems-2.0rc5-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,619 Found link https://files.pythonhosted.org/packages/cc/88/f1a1919d3f8d5f97b5c0a1ed877da038fa32bc827887f6bb76a4df429d37/inspirems-2.0rc5.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc5 2024-07-11T14:17:47,620 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/e1/9f/6ebb3d62383cdbcf2209d067ff44565ce693e9aeabc0cf942cf01089d8e3/inspirems-2.0rc6-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,621 Found link https://files.pythonhosted.org/packages/76/6e/63365b6b1d721ac032ad662549b02204e5558338a75979db0db714b6a2fd/inspirems-2.0rc6.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc6 2024-07-11T14:17:47,621 Skipping link: No binaries permitted for inspirems: https://files.pythonhosted.org/packages/9c/72/366ba3aa5a387a9fa9b3630b54affdd1d1dc8600e9e8e271b0c384e13d79/inspirems-2.0rc7-py3-none-any.whl (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,622 Found link https://files.pythonhosted.org/packages/75/6f/dc5bca2b116cf12baeeeb66511191afdbba6520d88c7093b6db3ce568801/inspirems-2.0rc7.tar.gz (from https://pypi.org/simple/inspirems/) (requires-python:>=3.11), version: 2.0rc7 2024-07-11T14:17:47,624 Fetching project page and analyzing links: https://www.piwheels.org/simple/inspirems/ 2024-07-11T14:17:47,625 Getting page https://www.piwheels.org/simple/inspirems/ 2024-07-11T14:17:47,626 Found index url https://www.piwheels.org/simple/ 2024-07-11T14:17:47,808 Fetched page https://www.piwheels.org/simple/inspirems/ as text/html 2024-07-11T14:17:47,811 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-2.0rc6-py3-none-any.whl#sha256=d7714b7f1e7b71ea72d5770399eb39a343cb37c889ce0502685c55019191b9c7 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,812 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-2.0rc5-py3-none-any.whl#sha256=8999bacdc062e085a518b47d8efe4dc28c32fb569971abd3b02774e96a11ac00 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,812 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-2.0rc4-py3-none-any.whl#sha256=6e37b2d7faf909b0d795ec91b97f2999b9e52aad2789a6b833fd1f255b1e3897 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.11) 2024-07-11T14:17:47,813 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.5-py3-none-any.whl#sha256=9856deec8e87cbc02e654bb8c1d86d5059df13a78e258a99c874b240d0416101 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,814 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.4-py3-none-any.whl#sha256=4f2a8f0cd2185cd7c8c0e8ab2e0856998880fe818631409510ae3d5e162dd9ef (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,814 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.3-py3-none-any.whl#sha256=cb8c2b1aa253c7afd2225db0cd66568ffe9c19f87e384cdf0e65232302afbbdb (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,815 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.2-py3-none-any.whl#sha256=c8423e9c5476fd5547e2f06739c9f2e1ad3e2b8779cb09d75368bcd794574b39 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,815 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.1-py3-none-any.whl#sha256=98ebaf5ab791e8b8a7f2941f6ffd59e1ebb2c166ef5354c6fdbe6048bc84b6cc (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,816 Skipping link: No binaries permitted for inspirems: https://www.piwheels.org/simple/inspirems/inspirems-1.0-py3-none-any.whl#sha256=93552d309190f792c0a3e08f858aac22aaedbf1db699420fd06205f879684289 (from https://www.piwheels.org/simple/inspirems/) (requires-python:>=3.8) 2024-07-11T14:17:47,817 Skipping link: not a file: https://www.piwheels.org/simple/inspirems/ 2024-07-11T14:17:47,818 Skipping link: not a file: https://pypi.org/simple/inspirems/ 2024-07-11T14:17:47,840 Given no hashes to check 1 links for project 'inspirems': discarding no candidates 2024-07-11T14:17:47,862 Collecting inspirems==2.0rc7 2024-07-11T14:17:47,864 Created temporary directory: /tmp/pip-unpack-o2inz3vj 2024-07-11T14:17:48,084 Downloading inspirems-2.0rc7.tar.gz (129 kB) 2024-07-11T14:17:48,311 Added inspirems==2.0rc7 from https://files.pythonhosted.org/packages/75/6f/dc5bca2b116cf12baeeeb66511191afdbba6520d88c7093b6db3ce568801/inspirems-2.0rc7.tar.gz to build tracker '/tmp/pip-build-tracker-vcuzx4jc' 2024-07-11T14:17:48,313 Running setup.py (path:/tmp/pip-wheel-cw3sxalp/inspirems_8b61164ead6f4a2191998da345448fa8/setup.py) egg_info for package inspirems 2024-07-11T14:17:48,314 Created temporary directory: /tmp/pip-pip-egg-info-esdiwi5u 2024-07-11T14:17:48,316 Preparing metadata (setup.py): started 2024-07-11T14:17:48,317 Running command python setup.py egg_info 2024-07-11T14:17:51,149 running egg_info 2024-07-11T14:17:51,150 creating /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info 2024-07-11T14:17:51,178 writing /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/PKG-INFO 2024-07-11T14:17:51,184 writing dependency_links to /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/dependency_links.txt 2024-07-11T14:17:51,185 writing entry points to /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/entry_points.txt 2024-07-11T14:17:51,188 writing requirements to /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/requires.txt 2024-07-11T14:17:51,189 writing top-level names to /tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/top_level.txt 2024-07-11T14:17:51,191 writing manifest file '/tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/SOURCES.txt' 2024-07-11T14:17:51,255 file inspire.py (for module inspire) not found 2024-07-11T14:17:51,256 file inspire/input.py (for module inspire.input) not found 2024-07-11T14:17:51,256 file inspire/quant.py (for module inspire.quant) not found 2024-07-11T14:17:51,257 file inspire/epitope.py (for module inspire.epitope) not found 2024-07-11T14:17:51,258 file inspire/plot_spectra.py (for module inspire.plot_spectra) not found 2024-07-11T14:17:51,295 reading manifest file '/tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/SOURCES.txt' 2024-07-11T14:17:51,296 adding license file 'LICENSE' 2024-07-11T14:17:51,299 writing manifest file '/tmp/pip-pip-egg-info-esdiwi5u/inspirems.egg-info/SOURCES.txt' 2024-07-11T14:17:51,431 Preparing metadata (setup.py): finished with status 'done' 2024-07-11T14:17:51,437 Source in /tmp/pip-wheel-cw3sxalp/inspirems_8b61164ead6f4a2191998da345448fa8 has version 2.0rc7, which satisfies requirement inspirems==2.0rc7 from https://files.pythonhosted.org/packages/75/6f/dc5bca2b116cf12baeeeb66511191afdbba6520d88c7093b6db3ce568801/inspirems-2.0rc7.tar.gz 2024-07-11T14:17:51,438 Removed inspirems==2.0rc7 from https://files.pythonhosted.org/packages/75/6f/dc5bca2b116cf12baeeeb66511191afdbba6520d88c7093b6db3ce568801/inspirems-2.0rc7.tar.gz from build tracker '/tmp/pip-build-tracker-vcuzx4jc' 2024-07-11T14:17:51,448 Created temporary directory: /tmp/pip-unpack-ufm48vki 2024-07-11T14:17:51,449 Created temporary directory: /tmp/pip-unpack-f71eguye 2024-07-11T14:17:51,537 Building wheels for collected packages: inspirems 2024-07-11T14:17:51,542 Created temporary directory: /tmp/pip-wheel-m6_n62kh 2024-07-11T14:17:51,542 Building wheel for inspirems (setup.py): started 2024-07-11T14:17:51,544 Destination directory: /tmp/pip-wheel-m6_n62kh 2024-07-11T14:17:51,544 Running command python setup.py bdist_wheel 2024-07-11T14:17:52,727 running bdist_wheel 2024-07-11T14:17:52,837 running build 2024-07-11T14:17:52,838 running build_py 2024-07-11T14:17:52,867 file inspire.py (for module inspire) not found 2024-07-11T14:17:52,868 file inspire/input.py (for module inspire.input) not found 2024-07-11T14:17:52,868 file inspire/quant.py (for module inspire.quant) not found 2024-07-11T14:17:52,869 file inspire/epitope.py (for module inspire.epitope) not found 2024-07-11T14:17:52,869 file inspire/plot_spectra.py (for module inspire.plot_spectra) not found 2024-07-11T14:17:52,870 creating build 2024-07-11T14:17:52,871 creating build/lib 2024-07-11T14:17:52,871 creating build/lib/inspire 2024-07-11T14:17:52,872 copying inspire/__init__.py -> build/lib/inspire 2024-07-11T14:17:52,875 copying inspire/constants.py -> build/lib/inspire 2024-07-11T14:17:52,878 copying inspire/spectral_features.py -> build/lib/inspire 2024-07-11T14:17:52,881 copying inspire/calibration.py -> build/lib/inspire 2024-07-11T14:17:52,883 copying inspire/validate.py -> build/lib/inspire 2024-07-11T14:17:52,886 copying inspire/prepare.py -> build/lib/inspire 2024-07-11T14:17:52,888 copying inspire/logo_plot_utils.py -> build/lib/inspire 2024-07-11T14:17:52,891 copying inspire/prosit.py -> build/lib/inspire 2024-07-11T14:17:52,893 copying inspire/accession.py -> build/lib/inspire 2024-07-11T14:17:52,896 copying inspire/rescore.py -> build/lib/inspire 2024-07-11T14:17:52,898 copying inspire/basic_features.py -> build/lib/inspire 2024-07-11T14:17:52,900 copying inspire/run.py -> build/lib/inspire 2024-07-11T14:17:52,902 copying inspire/config.py -> build/lib/inspire 2024-07-11T14:17:52,905 copying inspire/convert.py -> build/lib/inspire 2024-07-11T14:17:52,907 copying inspire/utils.py -> build/lib/inspire 2024-07-11T14:17:52,909 copying inspire/figures.py -> build/lib/inspire 2024-07-11T14:17:52,911 copying inspire/feature_selection.py -> build/lib/inspire 2024-07-11T14:17:52,914 copying inspire/predict_binding.py -> build/lib/inspire 2024-07-11T14:17:52,916 copying inspire/feature_creation.py -> build/lib/inspire 2024-07-11T14:17:52,918 copying inspire/get_spectral_angle.py -> build/lib/inspire 2024-07-11T14:17:52,921 copying inspire/execute_msfragger.py -> build/lib/inspire 2024-07-11T14:17:52,923 copying inspire/retention_time.py -> build/lib/inspire 2024-07-11T14:17:52,925 copying inspire/mz_match.py -> build/lib/inspire 2024-07-11T14:17:52,928 copying inspire/prosit_delta.py -> build/lib/inspire 2024-07-11T14:17:52,931 copying inspire/report.py -> build/lib/inspire 2024-07-11T14:17:52,933 copying inspire/html_template.py -> build/lib/inspire 2024-07-11T14:17:52,936 copying inspire/custom_logo.py -> build/lib/inspire 2024-07-11T14:17:52,938 copying inspire/predict_spectra.py -> build/lib/inspire 2024-07-11T14:17:52,940 copying inspire/download.py -> build/lib/inspire 2024-07-11T14:17:52,943 creating build/lib/inspire/input 2024-07-11T14:17:52,944 copying inspire/input/mgf.py -> build/lib/inspire/input 2024-07-11T14:17:52,946 copying inspire/input/peaks.py -> build/lib/inspire/input 2024-07-11T14:17:52,948 copying inspire/input/maxquant.py -> build/lib/inspire/input 2024-07-11T14:17:52,951 copying inspire/input/search_results.py -> build/lib/inspire/input 2024-07-11T14:17:52,952 copying inspire/input/mhcpan.py -> build/lib/inspire/input 2024-07-11T14:17:52,955 copying inspire/input/msfragger.py -> build/lib/inspire/input 2024-07-11T14:17:52,957 copying inspire/input/ssl.py -> build/lib/inspire/input 2024-07-11T14:17:52,959 copying inspire/input/mzml.py -> build/lib/inspire/input 2024-07-11T14:17:52,961 copying inspire/input/__init__.py -> build/lib/inspire/input 2024-07-11T14:17:52,962 copying inspire/input/mascot.py -> build/lib/inspire/input 2024-07-11T14:17:52,965 copying inspire/input/msp.py -> build/lib/inspire/input 2024-07-11T14:17:52,968 creating build/lib/inspire/quant 2024-07-11T14:17:52,969 copying inspire/quant/execute.py -> build/lib/inspire/quant 2024-07-11T14:17:52,972 copying inspire/quant/report_template.py -> build/lib/inspire/quant 2024-07-11T14:17:52,974 copying inspire/quant/utils.py -> build/lib/inspire/quant 2024-07-11T14:17:52,977 copying inspire/quant/normalise.py -> build/lib/inspire/quant 2024-07-11T14:17:52,979 copying inspire/quant/__init__.py -> build/lib/inspire/quant 2024-07-11T14:17:52,980 copying inspire/quant/de_analysis.py -> build/lib/inspire/quant 2024-07-11T14:17:52,983 creating build/lib/inspire/epitope 2024-07-11T14:17:52,984 copying inspire/epitope/extract_candidates.py -> build/lib/inspire/epitope 2024-07-11T14:17:52,987 copying inspire/epitope/report_template.py -> build/lib/inspire/epitope 2024-07-11T14:17:52,989 copying inspire/epitope/plot_utils.py -> build/lib/inspire/epitope 2024-07-11T14:17:52,992 copying inspire/epitope/__init__.py -> build/lib/inspire/epitope 2024-07-11T14:17:52,993 copying inspire/epitope/proteome_mapping.py -> build/lib/inspire/epitope 2024-07-11T14:17:52,996 creating build/lib/inspire/plot_spectra 2024-07-11T14:17:52,997 copying inspire/plot_spectra/plot_isobars.py -> build/lib/inspire/plot_spectra 2024-07-11T14:17:52,999 copying inspire/plot_spectra/plot_spectra.py -> build/lib/inspire/plot_spectra 2024-07-11T14:17:53,002 copying inspire/plot_spectra/__init__.py -> build/lib/inspire/plot_spectra 2024-07-11T14:17:53,003 copying inspire/plot_spectra/plot_spec_utils.py -> build/lib/inspire/plot_spectra 2024-07-11T14:17:53,008 file inspire.py (for module inspire) not found 2024-07-11T14:17:53,009 file inspire/input.py (for module inspire.input) not found 2024-07-11T14:17:53,009 file inspire/quant.py (for module inspire.quant) not found 2024-07-11T14:17:53,010 file inspire/epitope.py (for module inspire.epitope) not found 2024-07-11T14:17:53,010 file inspire/plot_spectra.py (for module inspire.plot_spectra) not found 2024-07-11T14:17:53,040 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-07-11T14:17:53,041 !! 2024-07-11T14:17:53,042 ******************************************************************************** 2024-07-11T14:17:53,042 Please avoid running ``setup.py`` directly. 2024-07-11T14:17:53,043 Instead, use pypa/build, pypa/installer or other 2024-07-11T14:17:53,043 standards-based tools. 2024-07-11T14:17:53,045 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-07-11T14:17:53,045 ******************************************************************************** 2024-07-11T14:17:53,046 !! 2024-07-11T14:17:53,047 self.initialize_options() 2024-07-11T14:17:53,069 installing to build/bdist.linux-armv7l/wheel 2024-07-11T14:17:53,069 running install 2024-07-11T14:17:53,094 running install_lib 2024-07-11T14:17:53,122 creating build/bdist.linux-armv7l 2024-07-11T14:17:53,123 creating build/bdist.linux-armv7l/wheel 2024-07-11T14:17:53,125 creating build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,127 creating build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,128 copying build/lib/inspire/input/mgf.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,130 copying build/lib/inspire/input/peaks.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,132 copying build/lib/inspire/input/maxquant.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,135 copying build/lib/inspire/input/search_results.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,137 copying build/lib/inspire/input/mhcpan.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,139 copying build/lib/inspire/input/msfragger.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,142 copying build/lib/inspire/input/ssl.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,144 copying build/lib/inspire/input/mzml.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,146 copying build/lib/inspire/input/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,147 copying build/lib/inspire/input/mascot.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,150 copying build/lib/inspire/input/msp.py -> build/bdist.linux-armv7l/wheel/inspire/input 2024-07-11T14:17:53,153 creating build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,154 copying build/lib/inspire/epitope/extract_candidates.py -> build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,157 copying build/lib/inspire/epitope/report_template.py -> build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,159 copying build/lib/inspire/epitope/plot_utils.py -> build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,162 copying build/lib/inspire/epitope/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,163 copying build/lib/inspire/epitope/proteome_mapping.py -> build/bdist.linux-armv7l/wheel/inspire/epitope 2024-07-11T14:17:53,166 copying build/lib/inspire/constants.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,169 copying build/lib/inspire/spectral_features.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,172 copying build/lib/inspire/calibration.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,175 copying build/lib/inspire/validate.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,178 copying build/lib/inspire/prepare.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,180 copying build/lib/inspire/logo_plot_utils.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,182 copying build/lib/inspire/prosit.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,184 copying build/lib/inspire/accession.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,187 copying build/lib/inspire/rescore.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,189 copying build/lib/inspire/basic_features.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,191 copying build/lib/inspire/run.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,194 copying build/lib/inspire/config.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,196 copying build/lib/inspire/convert.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,198 copying build/lib/inspire/utils.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,201 copying build/lib/inspire/figures.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,203 copying build/lib/inspire/feature_selection.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,205 copying build/lib/inspire/predict_binding.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,207 copying build/lib/inspire/feature_creation.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,211 creating build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,212 copying build/lib/inspire/quant/execute.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,214 copying build/lib/inspire/quant/report_template.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,217 copying build/lib/inspire/quant/utils.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,219 copying build/lib/inspire/quant/normalise.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,222 copying build/lib/inspire/quant/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,223 copying build/lib/inspire/quant/de_analysis.py -> build/bdist.linux-armv7l/wheel/inspire/quant 2024-07-11T14:17:53,226 copying build/lib/inspire/get_spectral_angle.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,229 copying build/lib/inspire/__init__.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,230 copying build/lib/inspire/execute_msfragger.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,233 copying build/lib/inspire/retention_time.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,235 copying build/lib/inspire/mz_match.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,238 creating build/bdist.linux-armv7l/wheel/inspire/plot_spectra 2024-07-11T14:17:53,239 copying build/lib/inspire/plot_spectra/plot_isobars.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra 2024-07-11T14:17:53,241 copying build/lib/inspire/plot_spectra/plot_spectra.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra 2024-07-11T14:17:53,244 copying build/lib/inspire/plot_spectra/__init__.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra 2024-07-11T14:17:53,246 copying build/lib/inspire/plot_spectra/plot_spec_utils.py -> build/bdist.linux-armv7l/wheel/inspire/plot_spectra 2024-07-11T14:17:53,248 copying build/lib/inspire/prosit_delta.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,251 copying build/lib/inspire/report.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,254 copying build/lib/inspire/html_template.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,256 copying build/lib/inspire/custom_logo.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,259 copying build/lib/inspire/predict_spectra.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,260 copying build/lib/inspire/download.py -> build/bdist.linux-armv7l/wheel/inspire 2024-07-11T14:17:53,263 running install_egg_info 2024-07-11T14:17:53,335 running egg_info 2024-07-11T14:17:53,363 writing inspirems.egg-info/PKG-INFO 2024-07-11T14:17:53,368 writing dependency_links to inspirems.egg-info/dependency_links.txt 2024-07-11T14:17:53,369 writing entry points to inspirems.egg-info/entry_points.txt 2024-07-11T14:17:53,372 writing requirements to inspirems.egg-info/requires.txt 2024-07-11T14:17:53,373 writing top-level names to inspirems.egg-info/top_level.txt 2024-07-11T14:17:53,376 file inspire.py (for module inspire) not found 2024-07-11T14:17:53,376 file inspire/input.py (for module inspire.input) not found 2024-07-11T14:17:53,377 file inspire/quant.py (for module inspire.quant) not found 2024-07-11T14:17:53,377 file inspire/epitope.py (for module inspire.epitope) not found 2024-07-11T14:17:53,378 file inspire/plot_spectra.py (for module inspire.plot_spectra) not found 2024-07-11T14:17:53,409 reading manifest file 'inspirems.egg-info/SOURCES.txt' 2024-07-11T14:17:53,413 adding license file 'LICENSE' 2024-07-11T14:17:53,416 writing manifest file 'inspirems.egg-info/SOURCES.txt' 2024-07-11T14:17:53,418 Copying inspirems.egg-info to build/bdist.linux-armv7l/wheel/inspirems-2.0rc7-py3.11.egg-info 2024-07-11T14:17:53,430 running install_scripts 2024-07-11T14:17:53,470 creating build/bdist.linux-armv7l/wheel/inspirems-2.0rc7.dist-info/WHEEL 2024-07-11T14:17:53,472 creating '/tmp/pip-wheel-m6_n62kh/inspirems-2.0rc7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-11T14:17:53,475 adding 'inspire/__init__.py' 2024-07-11T14:17:53,477 adding 'inspire/accession.py' 2024-07-11T14:17:53,478 adding 'inspire/basic_features.py' 2024-07-11T14:17:53,480 adding 'inspire/calibration.py' 2024-07-11T14:17:53,482 adding 'inspire/config.py' 2024-07-11T14:17:53,484 adding 'inspire/constants.py' 2024-07-11T14:17:53,486 adding 'inspire/convert.py' 2024-07-11T14:17:53,488 adding 'inspire/custom_logo.py' 2024-07-11T14:17:53,489 adding 'inspire/download.py' 2024-07-11T14:17:53,491 adding 'inspire/execute_msfragger.py' 2024-07-11T14:17:53,493 adding 'inspire/feature_creation.py' 2024-07-11T14:17:53,495 adding 'inspire/feature_selection.py' 2024-07-11T14:17:53,497 adding 'inspire/figures.py' 2024-07-11T14:17:53,499 adding 'inspire/get_spectral_angle.py' 2024-07-11T14:17:53,500 adding 'inspire/html_template.py' 2024-07-11T14:17:53,502 adding 'inspire/logo_plot_utils.py' 2024-07-11T14:17:53,504 adding 'inspire/mz_match.py' 2024-07-11T14:17:53,505 adding 'inspire/predict_binding.py' 2024-07-11T14:17:53,506 adding 'inspire/predict_spectra.py' 2024-07-11T14:17:53,508 adding 'inspire/prepare.py' 2024-07-11T14:17:53,511 adding 'inspire/prosit.py' 2024-07-11T14:17:53,513 adding 'inspire/prosit_delta.py' 2024-07-11T14:17:53,516 adding 'inspire/report.py' 2024-07-11T14:17:53,518 adding 'inspire/rescore.py' 2024-07-11T14:17:53,520 adding 'inspire/retention_time.py' 2024-07-11T14:17:53,522 adding 'inspire/run.py' 2024-07-11T14:17:53,525 adding 'inspire/spectral_features.py' 2024-07-11T14:17:53,528 adding 'inspire/utils.py' 2024-07-11T14:17:53,530 adding 'inspire/validate.py' 2024-07-11T14:17:53,532 adding 'inspire/epitope/__init__.py' 2024-07-11T14:17:53,534 adding 'inspire/epitope/extract_candidates.py' 2024-07-11T14:17:53,537 adding 'inspire/epitope/plot_utils.py' 2024-07-11T14:17:53,539 adding 'inspire/epitope/proteome_mapping.py' 2024-07-11T14:17:53,541 adding 'inspire/epitope/report_template.py' 2024-07-11T14:17:53,543 adding 'inspire/input/__init__.py' 2024-07-11T14:17:53,546 adding 'inspire/input/mascot.py' 2024-07-11T14:17:53,548 adding 'inspire/input/maxquant.py' 2024-07-11T14:17:53,549 adding 'inspire/input/mgf.py' 2024-07-11T14:17:53,551 adding 'inspire/input/mhcpan.py' 2024-07-11T14:17:53,554 adding 'inspire/input/msfragger.py' 2024-07-11T14:17:53,556 adding 'inspire/input/msp.py' 2024-07-11T14:17:53,558 adding 'inspire/input/mzml.py' 2024-07-11T14:17:53,560 adding 'inspire/input/peaks.py' 2024-07-11T14:17:53,561 adding 'inspire/input/search_results.py' 2024-07-11T14:17:53,562 adding 'inspire/input/ssl.py' 2024-07-11T14:17:53,564 adding 'inspire/plot_spectra/__init__.py' 2024-07-11T14:17:53,566 adding 'inspire/plot_spectra/plot_isobars.py' 2024-07-11T14:17:53,568 adding 'inspire/plot_spectra/plot_spec_utils.py' 2024-07-11T14:17:53,570 adding 'inspire/plot_spectra/plot_spectra.py' 2024-07-11T14:17:53,572 adding 'inspire/quant/__init__.py' 2024-07-11T14:17:53,574 adding 'inspire/quant/de_analysis.py' 2024-07-11T14:17:53,576 adding 'inspire/quant/execute.py' 2024-07-11T14:17:53,578 adding 'inspire/quant/normalise.py' 2024-07-11T14:17:53,580 adding 'inspire/quant/report_template.py' 2024-07-11T14:17:53,582 adding 'inspire/quant/utils.py' 2024-07-11T14:17:53,586 adding 'inspirems-2.0rc7.dist-info/LICENSE' 2024-07-11T14:17:53,588 adding 'inspirems-2.0rc7.dist-info/METADATA' 2024-07-11T14:17:53,589 adding 'inspirems-2.0rc7.dist-info/WHEEL' 2024-07-11T14:17:53,591 adding 'inspirems-2.0rc7.dist-info/entry_points.txt' 2024-07-11T14:17:53,592 adding 'inspirems-2.0rc7.dist-info/top_level.txt' 2024-07-11T14:17:53,593 adding 'inspirems-2.0rc7.dist-info/RECORD' 2024-07-11T14:17:53,597 removing build/bdist.linux-armv7l/wheel 2024-07-11T14:17:53,746 Building wheel for inspirems (setup.py): finished with status 'done' 2024-07-11T14:17:53,750 Created wheel for inspirems: filename=inspirems-2.0rc7-py3-none-any.whl size=149470 sha256=e035b147f009af56d3a32be43f56422398df4e341858ac1cc52b6bee0951d682 2024-07-11T14:17:53,752 Stored in directory: /tmp/pip-ephem-wheel-cache-ot409isc/wheels/55/a0/cf/ba9e5aabf56f7ce69cef2a265e09d4e5baa100d93f729d0faa 2024-07-11T14:17:53,770 Successfully built inspirems 2024-07-11T14:17:53,778 Removed build tracker: '/tmp/pip-build-tracker-vcuzx4jc'