2024-07-14T00:06:57,865 Created temporary directory: /tmp/pip-build-tracker-vbxtceik 2024-07-14T00:06:57,867 Initialized build tracking at /tmp/pip-build-tracker-vbxtceik 2024-07-14T00:06:57,867 Created build tracker: /tmp/pip-build-tracker-vbxtceik 2024-07-14T00:06:57,867 Entered build tracker: /tmp/pip-build-tracker-vbxtceik 2024-07-14T00:06:57,868 Created temporary directory: /tmp/pip-wheel-n6ue_vik 2024-07-14T00:06:57,872 Created temporary directory: /tmp/pip-ephem-wheel-cache-7eh44o0y 2024-07-14T00:06:57,896 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-14T00:06:57,899 2 location(s) to search for versions of pyalfe: 2024-07-14T00:06:57,899 * https://pypi.org/simple/pyalfe/ 2024-07-14T00:06:57,899 * https://www.piwheels.org/simple/pyalfe/ 2024-07-14T00:06:57,899 Fetching project page and analyzing links: https://pypi.org/simple/pyalfe/ 2024-07-14T00:06:57,900 Getting page https://pypi.org/simple/pyalfe/ 2024-07-14T00:06:57,902 Found index url https://pypi.org/simple/ 2024-07-14T00:06:57,952 Fetched page https://pypi.org/simple/pyalfe/ as application/vnd.pypi.simple.v1+json 2024-07-14T00:06:57,953 Skipping link: No binaries permitted for pyalfe: https://files.pythonhosted.org/packages/dc/95/93a771de946cd23815f5eaf1389d2600c2e260580cda4a903985a9c31563/pyalfe-0.1.0-py3-none-any.whl (from https://pypi.org/simple/pyalfe/) 2024-07-14T00:06:57,953 Found link https://files.pythonhosted.org/packages/49/fd/482d8639875156002af5cab5a82ae7eee92e75704cc8eeecbb2c9681cb82/pyalfe-0.1.0.tar.gz (from https://pypi.org/simple/pyalfe/), version: 0.1.0 2024-07-14T00:06:57,954 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyalfe/ 2024-07-14T00:06:57,954 Getting page https://www.piwheels.org/simple/pyalfe/ 2024-07-14T00:06:57,955 Found index url https://www.piwheels.org/simple/ 2024-07-14T00:06:58,023 Fetched page https://www.piwheels.org/simple/pyalfe/ as text/html 2024-07-14T00:06:58,024 Skipping link: not a file: https://www.piwheels.org/simple/pyalfe/ 2024-07-14T00:06:58,024 Skipping link: not a file: https://pypi.org/simple/pyalfe/ 2024-07-14T00:06:58,041 Given no hashes to check 1 links for project 'pyalfe': discarding no candidates 2024-07-14T00:06:58,058 Collecting pyalfe==0.1.0 2024-07-14T00:06:58,060 Created temporary directory: /tmp/pip-unpack-yvhaoiha 2024-07-14T00:06:58,103 Downloading pyalfe-0.1.0.tar.gz (37 kB) 2024-07-14T00:06:58,196 Added pyalfe==0.1.0 from https://files.pythonhosted.org/packages/49/fd/482d8639875156002af5cab5a82ae7eee92e75704cc8eeecbb2c9681cb82/pyalfe-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-vbxtceik' 2024-07-14T00:06:58,201 Created temporary directory: /tmp/pip-build-env-o1o5wtwz 2024-07-14T00:06:58,211 Installing build dependencies: started 2024-07-14T00:06:58,212 Running command pip subprocess to install build dependencies 2024-07-14T00:06:59,400 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-07-14T00:06:59,922 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-14T00:07:01,414 Collecting setuptools>=58.0.1 2024-07-14T00:07:01,432 Using cached https://www.piwheels.org/simple/setuptools/setuptools-70.3.0-py3-none-any.whl (931 kB) 2024-07-14T00:07:03,175 Installing collected packages: setuptools 2024-07-14T00:07:05,561 Successfully installed setuptools-70.3.0 2024-07-14T00:07:05,739 [notice] A new release of pip is available: 24.0 -> 24.1.2 2024-07-14T00:07:05,740 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-14T00:07:06,001 Installing build dependencies: finished with status 'done' 2024-07-14T00:07:06,006 Getting requirements to build wheel: started 2024-07-14T00:07:06,007 Running command Getting requirements to build wheel 2024-07-14T00:07:06,816 running egg_info 2024-07-14T00:07:06,821 writing pyalfe.egg-info/PKG-INFO 2024-07-14T00:07:06,827 writing dependency_links to pyalfe.egg-info/dependency_links.txt 2024-07-14T00:07:06,830 writing entry points to pyalfe.egg-info/entry_points.txt 2024-07-14T00:07:06,833 writing requirements to pyalfe.egg-info/requires.txt 2024-07-14T00:07:06,834 writing top-level names to pyalfe.egg-info/top_level.txt 2024-07-14T00:07:06,858 reading manifest file 'pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:06,861 reading manifest template 'MANIFEST.in' 2024-07-14T00:07:06,862 warning: no files found matching 'templates/oasis/*.nii.gz' 2024-07-14T00:07:06,862 adding license file 'LICENSE' 2024-07-14T00:07:06,866 writing manifest file 'pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:06,964 Getting requirements to build wheel: finished with status 'done' 2024-07-14T00:07:06,968 Created temporary directory: /tmp/pip-modern-metadata-gmbe2ect 2024-07-14T00:07:06,971 Preparing metadata (pyproject.toml): started 2024-07-14T00:07:06,972 Running command Preparing metadata (pyproject.toml) 2024-07-14T00:07:07,735 running dist_info 2024-07-14T00:07:07,741 creating /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info 2024-07-14T00:07:07,745 writing /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/PKG-INFO 2024-07-14T00:07:07,750 writing dependency_links to /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/dependency_links.txt 2024-07-14T00:07:07,752 writing entry points to /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/entry_points.txt 2024-07-14T00:07:07,755 writing requirements to /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/requires.txt 2024-07-14T00:07:07,756 writing top-level names to /tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/top_level.txt 2024-07-14T00:07:07,757 writing manifest file '/tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:07,776 reading manifest file '/tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:07,778 reading manifest template 'MANIFEST.in' 2024-07-14T00:07:07,778 warning: no files found matching 'templates/oasis/*.nii.gz' 2024-07-14T00:07:07,779 adding license file 'LICENSE' 2024-07-14T00:07:07,782 writing manifest file '/tmp/pip-modern-metadata-gmbe2ect/pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:07,783 creating '/tmp/pip-modern-metadata-gmbe2ect/pyalfe-0.1.0.dist-info' 2024-07-14T00:07:07,916 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-14T00:07:07,923 Source in /tmp/pip-wheel-n6ue_vik/pyalfe_1f16a96996af4e65adcce443b245d648 has version 0.1.0, which satisfies requirement pyalfe==0.1.0 from https://files.pythonhosted.org/packages/49/fd/482d8639875156002af5cab5a82ae7eee92e75704cc8eeecbb2c9681cb82/pyalfe-0.1.0.tar.gz 2024-07-14T00:07:07,924 Removed pyalfe==0.1.0 from https://files.pythonhosted.org/packages/49/fd/482d8639875156002af5cab5a82ae7eee92e75704cc8eeecbb2c9681cb82/pyalfe-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-vbxtceik' 2024-07-14T00:07:07,929 Created temporary directory: /tmp/pip-unpack-5kca2mcy 2024-07-14T00:07:07,930 Created temporary directory: /tmp/pip-unpack-fnior3rn 2024-07-14T00:07:07,961 Building wheels for collected packages: pyalfe 2024-07-14T00:07:07,965 Created temporary directory: /tmp/pip-wheel-rdh4e86z 2024-07-14T00:07:07,966 Destination directory: /tmp/pip-wheel-rdh4e86z 2024-07-14T00:07:07,968 Building wheel for pyalfe (pyproject.toml): started 2024-07-14T00:07:07,969 Running command Building wheel for pyalfe (pyproject.toml) 2024-07-14T00:07:08,718 running bdist_wheel 2024-07-14T00:07:08,734 running build 2024-07-14T00:07:08,734 running build_py 2024-07-14T00:07:08,739 creating build 2024-07-14T00:07:08,739 creating build/lib 2024-07-14T00:07:08,740 creating build/lib/pyalfe 2024-07-14T00:07:08,741 copying pyalfe/image_registration.py -> build/lib/pyalfe 2024-07-14T00:07:08,744 copying pyalfe/inference.py -> build/lib/pyalfe 2024-07-14T00:07:08,745 copying pyalfe/containers.py -> build/lib/pyalfe 2024-07-14T00:07:08,747 copying pyalfe/data_structure.py -> build/lib/pyalfe 2024-07-14T00:07:08,750 copying pyalfe/roi.py -> build/lib/pyalfe 2024-07-14T00:07:08,751 copying pyalfe/main.py -> build/lib/pyalfe 2024-07-14T00:07:08,753 copying pyalfe/__init__.py -> build/lib/pyalfe 2024-07-14T00:07:08,755 copying pyalfe/image_processing.py -> build/lib/pyalfe 2024-07-14T00:07:08,757 copying pyalfe/pipeline.py -> build/lib/pyalfe 2024-07-14T00:07:08,759 creating build/lib/pyalfe/interfaces 2024-07-14T00:07:08,760 copying pyalfe/interfaces/__init__.py -> build/lib/pyalfe/interfaces 2024-07-14T00:07:08,762 copying pyalfe/interfaces/c3d.py -> build/lib/pyalfe/interfaces 2024-07-14T00:07:08,763 copying pyalfe/interfaces/greedy.py -> build/lib/pyalfe/interfaces 2024-07-14T00:07:08,765 creating build/lib/pyalfe/models 2024-07-14T00:07:08,766 copying pyalfe/models/__init__.py -> build/lib/pyalfe/models 2024-07-14T00:07:08,769 creating build/lib/pyalfe/tasks 2024-07-14T00:07:08,770 copying pyalfe/tasks/segmentation.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,772 copying pyalfe/tasks/quantification.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,774 copying pyalfe/tasks/initialization.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,776 copying pyalfe/tasks/dicom_processing.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,778 copying pyalfe/tasks/__init__.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,780 copying pyalfe/tasks/t1_postprocessing.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,781 copying pyalfe/tasks/skullstripping.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,783 copying pyalfe/tasks/registration.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,785 copying pyalfe/tasks/t1_preprocessing.py -> build/lib/pyalfe/tasks 2024-07-14T00:07:08,787 creating build/lib/pyalfe/tools 2024-07-14T00:07:08,788 copying pyalfe/tools/__init__.py -> build/lib/pyalfe/tools 2024-07-14T00:07:08,790 creating build/lib/pyalfe/utils 2024-07-14T00:07:08,791 copying pyalfe/utils/technique.py -> build/lib/pyalfe/utils 2024-07-14T00:07:08,793 copying pyalfe/utils/archive.py -> build/lib/pyalfe/utils 2024-07-14T00:07:08,795 copying pyalfe/utils/__init__.py -> build/lib/pyalfe/utils 2024-07-14T00:07:08,796 copying pyalfe/utils/download.py -> build/lib/pyalfe/utils 2024-07-14T00:07:08,798 copying pyalfe/utils/dicom.py -> build/lib/pyalfe/utils 2024-07-14T00:07:08,800 running egg_info 2024-07-14T00:07:08,803 writing pyalfe.egg-info/PKG-INFO 2024-07-14T00:07:08,808 writing dependency_links to pyalfe.egg-info/dependency_links.txt 2024-07-14T00:07:08,810 writing entry points to pyalfe.egg-info/entry_points.txt 2024-07-14T00:07:08,813 writing requirements to pyalfe.egg-info/requires.txt 2024-07-14T00:07:08,814 writing top-level names to pyalfe.egg-info/top_level.txt 2024-07-14T00:07:08,826 reading manifest file 'pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:08,828 reading manifest template 'MANIFEST.in' 2024-07-14T00:07:08,829 warning: no files found matching 'templates/oasis/*.nii.gz' 2024-07-14T00:07:08,829 adding license file 'LICENSE' 2024-07-14T00:07:08,833 writing manifest file 'pyalfe.egg-info/SOURCES.txt' 2024-07-14T00:07:08,837 copying pyalfe/config.ini -> build/lib/pyalfe 2024-07-14T00:07:08,848 installing to build/bdist.linux-armv7l/wheel 2024-07-14T00:07:08,848 running install 2024-07-14T00:07:08,874 running install_lib 2024-07-14T00:07:08,878 creating build/bdist.linux-armv7l 2024-07-14T00:07:08,879 creating build/bdist.linux-armv7l/wheel 2024-07-14T00:07:08,880 creating build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,881 copying build/lib/pyalfe/image_registration.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,884 copying build/lib/pyalfe/inference.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,886 copying build/lib/pyalfe/containers.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,888 copying build/lib/pyalfe/data_structure.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,891 copying build/lib/pyalfe/roi.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,894 creating build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,894 copying build/lib/pyalfe/tasks/segmentation.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,897 copying build/lib/pyalfe/tasks/quantification.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,899 copying build/lib/pyalfe/tasks/initialization.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,901 copying build/lib/pyalfe/tasks/dicom_processing.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,903 copying build/lib/pyalfe/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,905 copying build/lib/pyalfe/tasks/t1_postprocessing.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,907 copying build/lib/pyalfe/tasks/skullstripping.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,909 copying build/lib/pyalfe/tasks/registration.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,911 copying build/lib/pyalfe/tasks/t1_preprocessing.py -> build/bdist.linux-armv7l/wheel/pyalfe/tasks 2024-07-14T00:07:08,913 creating build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,914 copying build/lib/pyalfe/utils/technique.py -> build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,916 copying build/lib/pyalfe/utils/archive.py -> build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,918 copying build/lib/pyalfe/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,919 copying build/lib/pyalfe/utils/download.py -> build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,921 copying build/lib/pyalfe/utils/dicom.py -> build/bdist.linux-armv7l/wheel/pyalfe/utils 2024-07-14T00:07:08,923 copying build/lib/pyalfe/main.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,926 creating build/bdist.linux-armv7l/wheel/pyalfe/interfaces 2024-07-14T00:07:08,926 copying build/lib/pyalfe/interfaces/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe/interfaces 2024-07-14T00:07:08,928 copying build/lib/pyalfe/interfaces/c3d.py -> build/bdist.linux-armv7l/wheel/pyalfe/interfaces 2024-07-14T00:07:08,930 copying build/lib/pyalfe/interfaces/greedy.py -> build/bdist.linux-armv7l/wheel/pyalfe/interfaces 2024-07-14T00:07:08,932 copying build/lib/pyalfe/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,933 copying build/lib/pyalfe/config.ini -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,935 creating build/bdist.linux-armv7l/wheel/pyalfe/models 2024-07-14T00:07:08,936 copying build/lib/pyalfe/models/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe/models 2024-07-14T00:07:08,938 copying build/lib/pyalfe/image_processing.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,940 copying build/lib/pyalfe/pipeline.py -> build/bdist.linux-armv7l/wheel/pyalfe 2024-07-14T00:07:08,942 creating build/bdist.linux-armv7l/wheel/pyalfe/tools 2024-07-14T00:07:08,943 copying build/lib/pyalfe/tools/__init__.py -> build/bdist.linux-armv7l/wheel/pyalfe/tools 2024-07-14T00:07:08,945 running install_egg_info 2024-07-14T00:07:08,949 Copying pyalfe.egg-info to build/bdist.linux-armv7l/wheel/pyalfe-0.1.0-py3.9.egg-info 2024-07-14T00:07:08,960 running install_scripts 2024-07-14T00:07:08,980 creating build/bdist.linux-armv7l/wheel/pyalfe-0.1.0.dist-info/WHEEL 2024-07-14T00:07:08,982 creating '/tmp/pip-wheel-rdh4e86z/.tmp-5zbkidus/pyalfe-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-14T00:07:08,984 adding 'pyalfe/__init__.py' 2024-07-14T00:07:08,986 adding 'pyalfe/config.ini' 2024-07-14T00:07:08,987 adding 'pyalfe/containers.py' 2024-07-14T00:07:08,990 adding 'pyalfe/data_structure.py' 2024-07-14T00:07:08,992 adding 'pyalfe/image_processing.py' 2024-07-14T00:07:08,994 adding 'pyalfe/image_registration.py' 2024-07-14T00:07:08,995 adding 'pyalfe/inference.py' 2024-07-14T00:07:08,997 adding 'pyalfe/main.py' 2024-07-14T00:07:08,998 adding 'pyalfe/pipeline.py' 2024-07-14T00:07:08,999 adding 'pyalfe/roi.py' 2024-07-14T00:07:09,001 adding 'pyalfe/interfaces/__init__.py' 2024-07-14T00:07:09,002 adding 'pyalfe/interfaces/c3d.py' 2024-07-14T00:07:09,003 adding 'pyalfe/interfaces/greedy.py' 2024-07-14T00:07:09,005 adding 'pyalfe/models/__init__.py' 2024-07-14T00:07:09,007 adding 'pyalfe/tasks/__init__.py' 2024-07-14T00:07:09,008 adding 'pyalfe/tasks/dicom_processing.py' 2024-07-14T00:07:09,010 adding 'pyalfe/tasks/initialization.py' 2024-07-14T00:07:09,012 adding 'pyalfe/tasks/quantification.py' 2024-07-14T00:07:09,014 adding 'pyalfe/tasks/registration.py' 2024-07-14T00:07:09,015 adding 'pyalfe/tasks/segmentation.py' 2024-07-14T00:07:09,017 adding 'pyalfe/tasks/skullstripping.py' 2024-07-14T00:07:09,018 adding 'pyalfe/tasks/t1_postprocessing.py' 2024-07-14T00:07:09,020 adding 'pyalfe/tasks/t1_preprocessing.py' 2024-07-14T00:07:09,021 adding 'pyalfe/tools/__init__.py' 2024-07-14T00:07:09,023 adding 'pyalfe/utils/__init__.py' 2024-07-14T00:07:09,024 adding 'pyalfe/utils/archive.py' 2024-07-14T00:07:09,026 adding 'pyalfe/utils/dicom.py' 2024-07-14T00:07:09,027 adding 'pyalfe/utils/download.py' 2024-07-14T00:07:09,028 adding 'pyalfe/utils/technique.py' 2024-07-14T00:07:09,030 adding 'pyalfe-0.1.0.dist-info/LICENSE' 2024-07-14T00:07:09,032 adding 'pyalfe-0.1.0.dist-info/METADATA' 2024-07-14T00:07:09,033 adding 'pyalfe-0.1.0.dist-info/WHEEL' 2024-07-14T00:07:09,034 adding 'pyalfe-0.1.0.dist-info/entry_points.txt' 2024-07-14T00:07:09,035 adding 'pyalfe-0.1.0.dist-info/top_level.txt' 2024-07-14T00:07:09,036 adding 'pyalfe-0.1.0.dist-info/RECORD' 2024-07-14T00:07:09,038 removing build/bdist.linux-armv7l/wheel 2024-07-14T00:07:09,151 Building wheel for pyalfe (pyproject.toml): finished with status 'done' 2024-07-14T00:07:09,157 Created wheel for pyalfe: filename=pyalfe-0.1.0-py3-none-any.whl size=42800 sha256=ad7c8dba91374d640c9ead44637c2cc662ab2bf0efcc903afb7e9bc6c13da7d7 2024-07-14T00:07:09,158 Stored in directory: /tmp/pip-ephem-wheel-cache-7eh44o0y/wheels/b5/5b/0c/2f86cdb914fac385a9b6749e7f4e9db837548e1a0aa3ed78fb 2024-07-14T00:07:09,171 Successfully built pyalfe 2024-07-14T00:07:09,175 Removed build tracker: '/tmp/pip-build-tracker-vbxtceik'