2024-07-18T00:45:12,068 Created temporary directory: /tmp/pip-build-tracker-nud_f4gt 2024-07-18T00:45:12,070 Initialized build tracking at /tmp/pip-build-tracker-nud_f4gt 2024-07-18T00:45:12,070 Created build tracker: /tmp/pip-build-tracker-nud_f4gt 2024-07-18T00:45:12,070 Entered build tracker: /tmp/pip-build-tracker-nud_f4gt 2024-07-18T00:45:12,071 Created temporary directory: /tmp/pip-wheel-zcbo9wrx 2024-07-18T00:45:12,074 Created temporary directory: /tmp/pip-ephem-wheel-cache-kg90wb42 2024-07-18T00:45:12,096 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-18T00:45:12,100 2 location(s) to search for versions of gbigsmiles: 2024-07-18T00:45:12,100 * https://pypi.org/simple/gbigsmiles/ 2024-07-18T00:45:12,100 * https://www.piwheels.org/simple/gbigsmiles/ 2024-07-18T00:45:12,101 Fetching project page and analyzing links: https://pypi.org/simple/gbigsmiles/ 2024-07-18T00:45:12,101 Getting page https://pypi.org/simple/gbigsmiles/ 2024-07-18T00:45:12,103 Found index url https://pypi.org/simple/ 2024-07-18T00:45:12,313 Fetched page https://pypi.org/simple/gbigsmiles/ as application/vnd.pypi.simple.v1+json 2024-07-18T00:45:12,315 Skipping link: No binaries permitted for gbigsmiles: https://files.pythonhosted.org/packages/bc/4b/ab439a39ec4463c029bf0696dd44e674bb446e6feb76286438af9caf74ee/gbigsmiles-0.2.0-py3-none-any.whl (from https://pypi.org/simple/gbigsmiles/) (requires-python:>=3.11) 2024-07-18T00:45:12,316 Found link https://files.pythonhosted.org/packages/c0/a3/28feab908c58604b14b52438b6c1eb5458836d6141b91d3e15dde87379be/gbigsmiles-0.2.0.tar.gz (from https://pypi.org/simple/gbigsmiles/) (requires-python:>=3.11), version: 0.2.0 2024-07-18T00:45:12,316 Fetching project page and analyzing links: https://www.piwheels.org/simple/gbigsmiles/ 2024-07-18T00:45:12,317 Getting page https://www.piwheels.org/simple/gbigsmiles/ 2024-07-18T00:45:12,318 Found index url https://www.piwheels.org/simple/ 2024-07-18T00:45:12,470 Fetched page https://www.piwheels.org/simple/gbigsmiles/ as text/html 2024-07-18T00:45:12,471 Skipping link: not a file: https://www.piwheels.org/simple/gbigsmiles/ 2024-07-18T00:45:12,472 Skipping link: not a file: https://pypi.org/simple/gbigsmiles/ 2024-07-18T00:45:12,492 Given no hashes to check 1 links for project 'gbigsmiles': discarding no candidates 2024-07-18T00:45:12,511 Collecting gbigsmiles==0.2.0 2024-07-18T00:45:12,514 Created temporary directory: /tmp/pip-unpack-t9ljrt1y 2024-07-18T00:45:12,727 Downloading gbigsmiles-0.2.0.tar.gz (578 kB) 2024-07-18T00:45:13,033 Added gbigsmiles==0.2.0 from https://files.pythonhosted.org/packages/c0/a3/28feab908c58604b14b52438b6c1eb5458836d6141b91d3e15dde87379be/gbigsmiles-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-nud_f4gt' 2024-07-18T00:45:13,040 Created temporary directory: /tmp/pip-build-env-2pi_mx8d 2024-07-18T00:45:13,044 Installing build dependencies: started 2024-07-18T00:45:13,046 Running command pip subprocess to install build dependencies 2024-07-18T00:45:14,199 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-07-18T00:45:14,739 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-18T00:45:16,224 Collecting setuptools>=43 2024-07-18T00:45:16,238 Using cached https://www.piwheels.org/simple/setuptools/setuptools-71.0.0-py3-none-any.whl (908 kB) 2024-07-18T00:45:16,467 Collecting wheel 2024-07-18T00:45:16,481 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-07-18T00:45:16,760 Collecting setuptools-scm 2024-07-18T00:45:16,773 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-18T00:45:17,148 Collecting packaging>=20 (from setuptools-scm) 2024-07-18T00:45:17,162 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-18T00:45:19,753 Installing collected packages: wheel, setuptools, packaging, setuptools-scm 2024-07-18T00:45:19,985 Creating /tmp/pip-build-env-2pi_mx8d/overlay/local/bin 2024-07-18T00:45:19,987 changing mode of /tmp/pip-build-env-2pi_mx8d/overlay/local/bin/wheel to 755 2024-07-18T00:45:23,093 Successfully installed packaging-24.1 setuptools-71.0.0 setuptools-scm-8.1.0 wheel-0.43.0 2024-07-18T00:45:23,405 [notice] A new release of pip is available: 24.0 -> 24.1.2 2024-07-18T00:45:23,406 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-18T00:45:23,694 Installing build dependencies: finished with status 'done' 2024-07-18T00:45:23,697 Getting requirements to build wheel: started 2024-07-18T00:45:23,698 Running command Getting requirements to build wheel 2024-07-18T00:45:24,339 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-07-18T00:45:24,340 `src-layout` detected -- analysing ./src 2024-07-18T00:45:24,343 discovered packages -- ['gbigsmiles', 'gbigsmiles.data'] 2024-07-18T00:45:24,344 discovered py_modules -- [] 2024-07-18T00:45:24,561 running egg_info 2024-07-18T00:45:24,567 writing src/gbigsmiles.egg-info/PKG-INFO 2024-07-18T00:45:24,571 writing dependency_links to src/gbigsmiles.egg-info/dependency_links.txt 2024-07-18T00:45:24,573 writing requirements to src/gbigsmiles.egg-info/requires.txt 2024-07-18T00:45:24,574 writing top-level names to src/gbigsmiles.egg-info/top_level.txt 2024-07-18T00:45:24,615 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-18T00:45:24,618 reading manifest file 'src/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:24,622 adding license file 'LICENSE' 2024-07-18T00:45:24,626 writing manifest file 'src/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:24,745 Getting requirements to build wheel: finished with status 'done' 2024-07-18T00:45:24,748 Created temporary directory: /tmp/pip-modern-metadata-elejmwvc 2024-07-18T00:45:24,751 Preparing metadata (pyproject.toml): started 2024-07-18T00:45:24,752 Running command Preparing metadata (pyproject.toml) 2024-07-18T00:45:25,343 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-07-18T00:45:25,343 `src-layout` detected -- analysing ./src 2024-07-18T00:45:25,346 discovered packages -- ['gbigsmiles', 'gbigsmiles.data'] 2024-07-18T00:45:25,346 discovered py_modules -- [] 2024-07-18T00:45:25,555 running dist_info 2024-07-18T00:45:25,561 creating /tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info 2024-07-18T00:45:25,566 writing /tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/PKG-INFO 2024-07-18T00:45:25,570 writing dependency_links to /tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/dependency_links.txt 2024-07-18T00:45:25,572 writing requirements to /tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/requires.txt 2024-07-18T00:45:25,573 writing top-level names to /tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/top_level.txt 2024-07-18T00:45:25,574 writing manifest file '/tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:25,611 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-18T00:45:25,614 reading manifest file '/tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:25,616 adding license file 'LICENSE' 2024-07-18T00:45:25,618 writing manifest file '/tmp/pip-modern-metadata-elejmwvc/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:25,619 creating '/tmp/pip-modern-metadata-elejmwvc/gbigsmiles-0.2.0.dist-info' 2024-07-18T00:45:25,766 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-18T00:45:25,771 Source in /tmp/pip-wheel-zcbo9wrx/gbigsmiles_a1e1fb2ae9394c5aad86a3c10c20d041 has version 0.2.0, which satisfies requirement gbigsmiles==0.2.0 from https://files.pythonhosted.org/packages/c0/a3/28feab908c58604b14b52438b6c1eb5458836d6141b91d3e15dde87379be/gbigsmiles-0.2.0.tar.gz 2024-07-18T00:45:25,772 Removed gbigsmiles==0.2.0 from https://files.pythonhosted.org/packages/c0/a3/28feab908c58604b14b52438b6c1eb5458836d6141b91d3e15dde87379be/gbigsmiles-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-nud_f4gt' 2024-07-18T00:45:25,778 Created temporary directory: /tmp/pip-unpack-i0qua47f 2024-07-18T00:45:25,779 Created temporary directory: /tmp/pip-unpack-x821039g 2024-07-18T00:45:25,788 Building wheels for collected packages: gbigsmiles 2024-07-18T00:45:25,793 Created temporary directory: /tmp/pip-wheel-gdojztve 2024-07-18T00:45:25,793 Destination directory: /tmp/pip-wheel-gdojztve 2024-07-18T00:45:25,795 Building wheel for gbigsmiles (pyproject.toml): started 2024-07-18T00:45:25,796 Running command Building wheel for gbigsmiles (pyproject.toml) 2024-07-18T00:45:26,378 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-07-18T00:45:26,379 `src-layout` detected -- analysing ./src 2024-07-18T00:45:26,381 discovered packages -- ['gbigsmiles', 'gbigsmiles.data'] 2024-07-18T00:45:26,382 discovered py_modules -- [] 2024-07-18T00:45:26,575 running bdist_wheel 2024-07-18T00:45:26,597 running build 2024-07-18T00:45:26,598 running build_py 2024-07-18T00:45:26,603 creating build 2024-07-18T00:45:26,604 creating build/lib 2024-07-18T00:45:26,605 creating build/lib/gbigsmiles 2024-07-18T00:45:26,606 copying src/gbigsmiles/token.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,608 copying src/gbigsmiles/_version.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,610 copying src/gbigsmiles/chem_resource.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,612 copying src/gbigsmiles/graph_generate.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,614 copying src/gbigsmiles/stochastic_atom_graph.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,616 copying src/gbigsmiles/molecule.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,619 copying src/gbigsmiles/stochastic.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,621 copying src/gbigsmiles/mixture.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,623 copying src/gbigsmiles/mol_prob.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,625 copying src/gbigsmiles/forcefield_helper.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,627 copying src/gbigsmiles/system.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,629 copying src/gbigsmiles/__init__.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,631 copying src/gbigsmiles/bond.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,633 copying src/gbigsmiles/distribution.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,635 copying src/gbigsmiles/atom.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,637 copying src/gbigsmiles/mol_gen.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,639 copying src/gbigsmiles/__main__.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,641 copying src/gbigsmiles/core.py -> build/lib/gbigsmiles 2024-07-18T00:45:26,643 running egg_info 2024-07-18T00:45:26,648 writing src/gbigsmiles.egg-info/PKG-INFO 2024-07-18T00:45:26,651 writing dependency_links to src/gbigsmiles.egg-info/dependency_links.txt 2024-07-18T00:45:26,652 writing requirements to src/gbigsmiles.egg-info/requires.txt 2024-07-18T00:45:26,653 writing top-level names to src/gbigsmiles.egg-info/top_level.txt 2024-07-18T00:45:26,681 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-18T00:45:26,684 reading manifest file 'src/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:26,687 adding license file 'LICENSE' 2024-07-18T00:45:26,690 writing manifest file 'src/gbigsmiles.egg-info/SOURCES.txt' 2024-07-18T00:45:26,694 copying src/gbigsmiles/.gitignore -> build/lib/gbigsmiles 2024-07-18T00:45:26,696 creating build/lib/gbigsmiles/data 2024-07-18T00:45:26,697 copying src/gbigsmiles/data/ffbonded.itp -> build/lib/gbigsmiles/data 2024-07-18T00:45:26,703 copying src/gbigsmiles/data/ffnonbonded.itp -> build/lib/gbigsmiles/data 2024-07-18T00:45:26,707 copying src/gbigsmiles/data/opls.par -> build/lib/gbigsmiles/data 2024-07-18T00:45:26,721 installing to build/bdist.linux-armv7l/wheel 2024-07-18T00:45:26,722 running install 2024-07-18T00:45:26,746 running install_lib 2024-07-18T00:45:26,751 creating build/bdist.linux-armv7l 2024-07-18T00:45:26,752 creating build/bdist.linux-armv7l/wheel 2024-07-18T00:45:26,753 creating build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,754 copying build/lib/gbigsmiles/token.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,757 copying build/lib/gbigsmiles/.gitignore -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,758 copying build/lib/gbigsmiles/_version.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,760 creating build/bdist.linux-armv7l/wheel/gbigsmiles/data 2024-07-18T00:45:26,761 copying build/lib/gbigsmiles/data/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/gbigsmiles/data 2024-07-18T00:45:26,764 copying build/lib/gbigsmiles/data/ffbonded.itp -> build/bdist.linux-armv7l/wheel/gbigsmiles/data 2024-07-18T00:45:26,770 copying build/lib/gbigsmiles/data/opls.par -> build/bdist.linux-armv7l/wheel/gbigsmiles/data 2024-07-18T00:45:26,773 copying build/lib/gbigsmiles/chem_resource.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,775 copying build/lib/gbigsmiles/graph_generate.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,777 copying build/lib/gbigsmiles/stochastic_atom_graph.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,779 copying build/lib/gbigsmiles/molecule.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,781 copying build/lib/gbigsmiles/stochastic.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,783 copying build/lib/gbigsmiles/mixture.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,785 copying build/lib/gbigsmiles/mol_prob.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,788 copying build/lib/gbigsmiles/forcefield_helper.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,790 copying build/lib/gbigsmiles/system.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,792 copying build/lib/gbigsmiles/__init__.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,794 copying build/lib/gbigsmiles/bond.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,796 copying build/lib/gbigsmiles/distribution.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,798 copying build/lib/gbigsmiles/atom.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,800 copying build/lib/gbigsmiles/mol_gen.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,802 copying build/lib/gbigsmiles/__main__.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,804 copying build/lib/gbigsmiles/core.py -> build/bdist.linux-armv7l/wheel/gbigsmiles 2024-07-18T00:45:26,806 running install_egg_info 2024-07-18T00:45:26,811 Copying src/gbigsmiles.egg-info to build/bdist.linux-armv7l/wheel/gbigsmiles-0.2.0-py3.11.egg-info 2024-07-18T00:45:26,821 running install_scripts 2024-07-18T00:45:26,837 creating build/bdist.linux-armv7l/wheel/gbigsmiles-0.2.0.dist-info/WHEEL 2024-07-18T00:45:26,839 creating '/tmp/pip-wheel-gdojztve/.tmp-7_knwrp7/gbigsmiles-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-18T00:45:26,841 adding 'gbigsmiles/.gitignore' 2024-07-18T00:45:26,843 adding 'gbigsmiles/__init__.py' 2024-07-18T00:45:26,844 adding 'gbigsmiles/__main__.py' 2024-07-18T00:45:26,845 adding 'gbigsmiles/_version.py' 2024-07-18T00:45:26,847 adding 'gbigsmiles/atom.py' 2024-07-18T00:45:26,848 adding 'gbigsmiles/bond.py' 2024-07-18T00:45:26,850 adding 'gbigsmiles/chem_resource.py' 2024-07-18T00:45:26,852 adding 'gbigsmiles/core.py' 2024-07-18T00:45:26,854 adding 'gbigsmiles/distribution.py' 2024-07-18T00:45:26,856 adding 'gbigsmiles/forcefield_helper.py' 2024-07-18T00:45:26,859 adding 'gbigsmiles/graph_generate.py' 2024-07-18T00:45:26,860 adding 'gbigsmiles/mixture.py' 2024-07-18T00:45:26,862 adding 'gbigsmiles/mol_gen.py' 2024-07-18T00:45:26,864 adding 'gbigsmiles/mol_prob.py' 2024-07-18T00:45:26,867 adding 'gbigsmiles/molecule.py' 2024-07-18T00:45:26,869 adding 'gbigsmiles/stochastic.py' 2024-07-18T00:45:26,872 adding 'gbigsmiles/stochastic_atom_graph.py' 2024-07-18T00:45:26,874 adding 'gbigsmiles/system.py' 2024-07-18T00:45:26,876 adding 'gbigsmiles/token.py' 2024-07-18T00:45:26,894 adding 'gbigsmiles/data/ffbonded.itp' 2024-07-18T00:45:26,902 adding 'gbigsmiles/data/ffnonbonded.itp' 2024-07-18T00:45:26,908 adding 'gbigsmiles/data/opls.par' 2024-07-18T00:45:26,915 adding 'gbigsmiles-0.2.0.dist-info/LICENSE' 2024-07-18T00:45:26,918 adding 'gbigsmiles-0.2.0.dist-info/METADATA' 2024-07-18T00:45:26,920 adding 'gbigsmiles-0.2.0.dist-info/WHEEL' 2024-07-18T00:45:26,921 adding 'gbigsmiles-0.2.0.dist-info/top_level.txt' 2024-07-18T00:45:26,922 adding 'gbigsmiles-0.2.0.dist-info/RECORD' 2024-07-18T00:45:26,925 removing build/bdist.linux-armv7l/wheel 2024-07-18T00:45:27,051 Building wheel for gbigsmiles (pyproject.toml): finished with status 'done' 2024-07-18T00:45:27,058 Created wheel for gbigsmiles: filename=gbigsmiles-0.2.0-py3-none-any.whl size=98903 sha256=1b09002e47b0508eb0fd651092c2b1d4ff2339d69ee59de8c8d05033fb509676 2024-07-18T00:45:27,059 Stored in directory: /tmp/pip-ephem-wheel-cache-kg90wb42/wheels/a8/9f/45/274d66447b9c31810774e39d11cbcd7c128a8d3cd773fea2e2 2024-07-18T00:45:27,072 Successfully built gbigsmiles 2024-07-18T00:45:27,077 Removed build tracker: '/tmp/pip-build-tracker-nud_f4gt'