2024-07-19T19:00:59,750 Created temporary directory: /tmp/pip-build-tracker-v8hd91vf
2024-07-19T19:00:59,751 Initialized build tracking at /tmp/pip-build-tracker-v8hd91vf
2024-07-19T19:00:59,752 Created build tracker: /tmp/pip-build-tracker-v8hd91vf
2024-07-19T19:00:59,752 Entered build tracker: /tmp/pip-build-tracker-v8hd91vf
2024-07-19T19:00:59,753 Created temporary directory: /tmp/pip-wheel-5r6k3gu7
2024-07-19T19:00:59,756 Created temporary directory: /tmp/pip-ephem-wheel-cache-9ez87rg6
2024-07-19T19:00:59,778 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-19T19:00:59,781 2 location(s) to search for versions of straindesign:
2024-07-19T19:00:59,781 * https://pypi.org/simple/straindesign/
2024-07-19T19:00:59,781 * https://www.piwheels.org/simple/straindesign/
2024-07-19T19:00:59,782 Fetching project page and analyzing links: https://pypi.org/simple/straindesign/
2024-07-19T19:00:59,783 Getting page https://pypi.org/simple/straindesign/
2024-07-19T19:00:59,784 Found index url https://pypi.org/simple/
2024-07-19T19:01:00,003 Fetched page https://pypi.org/simple/straindesign/ as application/vnd.pypi.simple.v1+json
2024-07-19T19:01:00,009   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/4f/ca/0632774bf16f658c724bcefa47540fafde0665672f24bd621ee49a6bb202/straindesign-0.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,010   Found link https://files.pythonhosted.org/packages/8b/28/eb055298ca2ec120b412ced0e27fda384fd320cb5146bc90f559789b9579/straindesign-0.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 0.1
2024-07-19T19:01:00,011   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a5/88/d071927aa6162799c594ed6e2cd17e412a2f923c088daba35beecbc4fd61/straindesign-0.2-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,012   Found link https://files.pythonhosted.org/packages/a1/44/8eb5efa777c2873bd7d303a2376f6b4a6d9eb28dc2c52f505d6363d59f3b/straindesign-0.2.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 0.2
2024-07-19T19:01:00,012   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/5b/b7/37aff9e54cf2beb24638cba75611b92aad32a26f89f4e9e56f907c60f1be/straindesign-1.0-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,013   Found link https://files.pythonhosted.org/packages/4c/74/cd284247353e42da873daa2bcbbf212283bff6f80c63b8b757c0e6e308a8/straindesign-1.0.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.0
2024-07-19T19:01:00,014   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/24/cf/0e974fff3b245339b2d087859d8ecf18a2227245f88f1ca02c7d8a61dd24/straindesign-1.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,015   Found link https://files.pythonhosted.org/packages/58/43/d543512a33e0ea7cfbb1dc9083bffadb390aed4d06fc02c9493f50ba9d9b/straindesign-1.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.1
2024-07-19T19:01:00,016   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/e8/56/c4a5e9374b3be30232e81bd5963736e48013cf4a6be8bd8216cc12863531/straindesign-1.2-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,017   Found link https://files.pythonhosted.org/packages/e1/31/4aaf57ac3fc2ae320f2d9e8909bc7a9b7cc777cc3e8e293e295dfa05c088/straindesign-1.2.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.2
2024-07-19T19:01:00,017   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/36/d4/9517e96f7d455e1b13260cad32dffd2395c4026be3ead7c48a2689f6a8c5/straindesign-1.3-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,018   Found link https://files.pythonhosted.org/packages/78/0d/558b9cf275d02cce00dd8921cc2083face2cbf9a1e6e43c985279fc72742/straindesign-1.3.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.3
2024-07-19T19:01:00,019   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/df/8e/a94aaaa8f3b70bc43ad1b5e50cbbb73a7b7c5bca30c015b853426ad520e5/straindesign-1.4.1-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,020   Found link https://files.pythonhosted.org/packages/66/85/b7ec43b1d65ce056cbd7f5c8fa853ed4a4cb502cd9edcdfbbb3dcea510ff/straindesign-1.4.1.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.4.1
2024-07-19T19:01:00,021   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/34/a2/7d7be7f9db9c205b5f2802773644bf367cc32b179831eea7c32eb0cf9167/straindesign-1.5-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,021   Found link https://files.pythonhosted.org/packages/ef/3d/06d171bd58416cec3dcea5118ceda84d28dcee9bc192805c845bdc4fa589/straindesign-1.5.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.5
2024-07-19T19:01:00,022   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/48/f6/0ce53b413df493de1dae14ab119d7179d26c58198dbb93ee0f88890cc446/straindesign-1.6-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,023   Found link https://files.pythonhosted.org/packages/75/4a/3f889442f4625b1df37e604efc54ecc7d9937feef99c729e69594ae5cb7b/straindesign-1.6.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.6
2024-07-19T19:01:00,023   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a2/40/95c3b2f15ac8200add9699ef370aa796139086d879ab607af2bfe7dc1265/straindesign-1.7-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,024   Found link https://files.pythonhosted.org/packages/64/0f/629cdcd2618500e95b965f5f1b9bbc33ad535382c3d1acd0db9b5013acce/straindesign-1.7.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.7
2024-07-19T19:01:00,025   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a4/f6/2b11b92cad5df2d1d2a2be3b96ace1652fd29539379bfb6fe71bf124c895/straindesign-1.8-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,026   Found link https://files.pythonhosted.org/packages/26/8d/fb0ecc16109fbf050939d9ed4110cbe6f80cd26ddca221cb3aa91b52473b/straindesign-1.8.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.8
2024-07-19T19:01:00,027   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a4/36/622e5a5af4df05f070009a0acf8e0744f55d4f10faaa1178796ab135ca13/straindesign-1.9-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,027   Found link https://files.pythonhosted.org/packages/63/0e/1099d9ed1bc90df63d09cd2903a72a6c37b4d95e5055a1982cdb9d99e32f/straindesign-1.9.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.9
2024-07-19T19:01:00,028   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/fe/11/0934ccd8e6613e9878738d38535a1a4b7a23dba30b1d6cad255a9d1355a2/straindesign-1.10-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,029   Found link https://files.pythonhosted.org/packages/0d/e1/00cca416f2b14417d4fd0907c54fefb6ba516350111cfd800d34d5d2e101/straindesign-1.10.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.10
2024-07-19T19:01:00,030   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/a1/e1/7f32f9927ad296ecffb15de41661fe3814cc6cb82a38a017982d95925b27/straindesign-1.11-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,031   Found link https://files.pythonhosted.org/packages/e2/a2/a05c0a70706d8eca37718f876b6a72ce90659919318d1d61b166afe07c6e/straindesign-1.11.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.11
2024-07-19T19:01:00,031   Skipping link: No binaries permitted for straindesign: https://files.pythonhosted.org/packages/c9/56/8463d330cf29fcb571627e946fad9bb75aba8b9c542fd75e0d68c98086b0/straindesign-1.12-py3-none-any.whl (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,032   Found link https://files.pythonhosted.org/packages/1e/08/12dfafc66199849d771382604af58a22480fb128fe595b6a91dc32f439cf/straindesign-1.12.tar.gz (from https://pypi.org/simple/straindesign/) (requires-python:>=3.7), version: 1.12
2024-07-19T19:01:00,033 Fetching project page and analyzing links: https://www.piwheels.org/simple/straindesign/
2024-07-19T19:01:00,033 Getting page https://www.piwheels.org/simple/straindesign/
2024-07-19T19:01:00,035 Found index url https://www.piwheels.org/simple/
2024-07-19T19:01:00,203 Fetched page https://www.piwheels.org/simple/straindesign/ as text/html
2024-07-19T19:01:00,209   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.11-py3-none-any.whl#sha256=fa8d372cd593f306675fc2beb45e44181836e519f36f2892291c9164de844d01 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,209   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.10-py3-none-any.whl#sha256=10c84be708032d3c6c2b1de111df679942e0ed752791570d1a59bb0cd45f6c05 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,210   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.9-py3-none-any.whl#sha256=827a3eaf69170ec5db9f02e4163c2e6f844fca2744d5da0f7d031584090c960f (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,211   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.8-py3-none-any.whl#sha256=2e72152dec6745a0a5468a5a5b0590e95c053e79e1a55f00f54365d7fc547c11 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,211   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.7-py3-none-any.whl#sha256=652b29208da576e86b5eb0dbaafd63da2b681485116007eb6339e31f273cf9ca (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,212   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.6-py3-none-any.whl#sha256=b76affbd9dc29b7ecde012f72c84e2294775a5395908ef1a6d62573cecaa5f1e (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,212   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.5-py3-none-any.whl#sha256=51c84ac7b8a5d9ca57f62ada3ae9fbde1c52c5a09b4579491ff90545237a112a (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,213   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.4.1-py3-none-any.whl#sha256=e1f4c8053ded340fe7cb80716b46d19041c9e9f70bea245e052e3ba7a0e954d0 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,214   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.3-py3-none-any.whl#sha256=934cfbb9fdd8d9e77268112390d4813818bb345af3858e50223229f72bb38aa4 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,214   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.2-py3-none-any.whl#sha256=9ef7d7da824fcb6a8b9f697e8680284eb11240087991788ffd560a4f8bcee123 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,215   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.1-py3-none-any.whl#sha256=bbd2e1331957941be51c3fe329f71ad5be6d7de5b04efd399ed905aa10810fab (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,216   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-1.0-py3-none-any.whl#sha256=927577542ed49e36db661b99af1883c84b7a8d3ba6e50844bc5b1e1d7809141d (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,216   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-0.2-py3-none-any.whl#sha256=c29f957858865c736cfd17ad90f552e06f9edbe2ff98672fa136b296cf64c3a7 (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,216   Skipping link: No binaries permitted for straindesign: https://www.piwheels.org/simple/straindesign/straindesign-0.1-py3-none-any.whl#sha256=2b4ae128601ffddfc38397e08e900f50d782984a3b9bae71da4d09b27b45054b (from https://www.piwheels.org/simple/straindesign/) (requires-python:>=3.7)
2024-07-19T19:01:00,217 Skipping link: not a file: https://www.piwheels.org/simple/straindesign/
2024-07-19T19:01:00,218 Skipping link: not a file: https://pypi.org/simple/straindesign/
2024-07-19T19:01:00,239 Given no hashes to check 1 links for project 'straindesign': discarding no candidates
2024-07-19T19:01:00,260 Collecting straindesign==1.12
2024-07-19T19:01:00,262   Created temporary directory: /tmp/pip-unpack-6x9u_hxd
2024-07-19T19:01:00,484   Downloading straindesign-1.12.tar.gz (2.2 MB)
2024-07-19T19:01:01,014   Added straindesign==1.12 from https://files.pythonhosted.org/packages/1e/08/12dfafc66199849d771382604af58a22480fb128fe595b6a91dc32f439cf/straindesign-1.12.tar.gz to build tracker '/tmp/pip-build-tracker-v8hd91vf'
2024-07-19T19:01:01,017   Running setup.py (path:/tmp/pip-wheel-5r6k3gu7/straindesign_2cc4edcf9fda488a803599d7199e2110/setup.py) egg_info for package straindesign
2024-07-19T19:01:01,018   Created temporary directory: /tmp/pip-pip-egg-info-0rhbmsb3
2024-07-19T19:01:01,019   Preparing metadata (setup.py): started
2024-07-19T19:01:01,020   Running command python setup.py egg_info
2024-07-19T19:01:02,134   running egg_info
2024-07-19T19:01:02,135   creating /tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info
2024-07-19T19:01:02,161   writing /tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/PKG-INFO
2024-07-19T19:01:02,165   writing dependency_links to /tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/dependency_links.txt
2024-07-19T19:01:02,167   writing requirements to /tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/requires.txt
2024-07-19T19:01:02,168   writing top-level names to /tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/top_level.txt
2024-07-19T19:01:02,169   writing manifest file '/tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/SOURCES.txt'
2024-07-19T19:01:02,252   reading manifest file '/tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/SOURCES.txt'
2024-07-19T19:01:02,253   adding license file 'LICENSE'
2024-07-19T19:01:02,256   writing manifest file '/tmp/pip-pip-egg-info-0rhbmsb3/straindesign.egg-info/SOURCES.txt'
2024-07-19T19:01:02,373   Preparing metadata (setup.py): finished with status 'done'
2024-07-19T19:01:02,377   Source in /tmp/pip-wheel-5r6k3gu7/straindesign_2cc4edcf9fda488a803599d7199e2110 has version 1.12, which satisfies requirement straindesign==1.12 from https://files.pythonhosted.org/packages/1e/08/12dfafc66199849d771382604af58a22480fb128fe595b6a91dc32f439cf/straindesign-1.12.tar.gz
2024-07-19T19:01:02,378   Removed straindesign==1.12 from https://files.pythonhosted.org/packages/1e/08/12dfafc66199849d771382604af58a22480fb128fe595b6a91dc32f439cf/straindesign-1.12.tar.gz from build tracker '/tmp/pip-build-tracker-v8hd91vf'
2024-07-19T19:01:02,384 Created temporary directory: /tmp/pip-unpack-i8o8y4ab
2024-07-19T19:01:02,385 Created temporary directory: /tmp/pip-unpack-u3lr_c18
2024-07-19T19:01:02,392 Building wheels for collected packages: straindesign
2024-07-19T19:01:02,396   Created temporary directory: /tmp/pip-wheel-aket_i4u
2024-07-19T19:01:02,396   Building wheel for straindesign (setup.py): started
2024-07-19T19:01:02,398   Destination directory: /tmp/pip-wheel-aket_i4u
2024-07-19T19:01:02,398   Running command python setup.py bdist_wheel
2024-07-19T19:01:03,460   running bdist_wheel
2024-07-19T19:01:03,556   running build
2024-07-19T19:01:03,557   running build_py
2024-07-19T19:01:03,584   creating build
2024-07-19T19:01:03,584   creating build/lib
2024-07-19T19:01:03,585   creating build/lib/tests
2024-07-19T19:01:03,586   copying tests/test_02_lp_optimization.py -> build/lib/tests
2024-07-19T19:01:03,588   copying tests/test_05_straindesign.py -> build/lib/tests
2024-07-19T19:01:03,590   copying tests/__init__.py -> build/lib/tests
2024-07-19T19:01:03,591   copying tests/custom.py -> build/lib/tests
2024-07-19T19:01:03,593   copying tests/conftest.py -> build/lib/tests
2024-07-19T19:01:03,594   copying tests/test_03_plots.py -> build/lib/tests
2024-07-19T19:01:03,596   copying tests/test_04_preprocessing.py -> build/lib/tests
2024-07-19T19:01:03,598   copying tests/test_01_load_models_and_solvers.py -> build/lib/tests
2024-07-19T19:01:03,600   creating build/lib/straindesign
2024-07-19T19:01:03,601   copying straindesign/scip_interface.py -> build/lib/straindesign
2024-07-19T19:01:03,604   copying straindesign/cplex_interface.py -> build/lib/straindesign
2024-07-19T19:01:03,606   copying straindesign/gurobi_interface.py -> build/lib/straindesign
2024-07-19T19:01:03,608   copying straindesign/glpk_interface.py -> build/lib/straindesign
2024-07-19T19:01:03,611   copying straindesign/strainDesignMILP.py -> build/lib/straindesign
2024-07-19T19:01:03,613   copying straindesign/networktools.py -> build/lib/straindesign
2024-07-19T19:01:03,616   copying straindesign/compute_strain_designs.py -> build/lib/straindesign
2024-07-19T19:01:03,618   copying straindesign/efmtool.py -> build/lib/straindesign
2024-07-19T19:01:03,621   copying straindesign/parse_constr.py -> build/lib/straindesign
2024-07-19T19:01:03,623   copying straindesign/indicatorConstraints.py -> build/lib/straindesign
2024-07-19T19:01:03,625   copying straindesign/strainDesignModule.py -> build/lib/straindesign
2024-07-19T19:01:03,627   copying straindesign/__init__.py -> build/lib/straindesign
2024-07-19T19:01:03,629   copying straindesign/lptools.py -> build/lib/straindesign
2024-07-19T19:01:03,631   copying straindesign/strainDesignProblem.py -> build/lib/straindesign
2024-07-19T19:01:03,634   copying straindesign/names.py -> build/lib/straindesign
2024-07-19T19:01:03,636   copying straindesign/strainDesignSolutions.py -> build/lib/straindesign
2024-07-19T19:01:03,638   copying straindesign/solver_interface.py -> build/lib/straindesign
2024-07-19T19:01:03,641   copying straindesign/pool.py -> build/lib/straindesign
2024-07-19T19:01:03,644   copying straindesign/efmtool.jar -> build/lib/straindesign
2024-07-19T19:01:03,706   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-07-19T19:01:03,707   !!

2024-07-19T19:01:03,708           ********************************************************************************
2024-07-19T19:01:03,708           Please avoid running ``setup.py`` directly.
2024-07-19T19:01:03,709           Instead, use pypa/build, pypa/installer or other
2024-07-19T19:01:03,710           standards-based tools.

2024-07-19T19:01:03,711           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-07-19T19:01:03,712           ********************************************************************************

2024-07-19T19:01:03,713   !!
2024-07-19T19:01:03,713     self.initialize_options()
2024-07-19T19:01:03,736   installing to build/bdist.linux-armv7l/wheel
2024-07-19T19:01:03,737   running install
2024-07-19T19:01:03,761   running install_lib
2024-07-19T19:01:03,787   creating build/bdist.linux-armv7l
2024-07-19T19:01:03,788   creating build/bdist.linux-armv7l/wheel
2024-07-19T19:01:03,790   creating build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,791   copying build/lib/tests/test_02_lp_optimization.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,794   copying build/lib/tests/test_05_straindesign.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,796   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,798   copying build/lib/tests/custom.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,800   copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,802   copying build/lib/tests/test_03_plots.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,805   copying build/lib/tests/test_04_preprocessing.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,807   copying build/lib/tests/test_01_load_models_and_solvers.py -> build/bdist.linux-armv7l/wheel/tests
2024-07-19T19:01:03,810   creating build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,811   copying build/lib/straindesign/scip_interface.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,814   copying build/lib/straindesign/cplex_interface.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,816   copying build/lib/straindesign/gurobi_interface.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,819   copying build/lib/straindesign/glpk_interface.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,821   copying build/lib/straindesign/strainDesignMILP.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,824   copying build/lib/straindesign/networktools.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,827   copying build/lib/straindesign/compute_strain_designs.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,830   copying build/lib/straindesign/efmtool.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,832   copying build/lib/straindesign/parse_constr.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,834   copying build/lib/straindesign/indicatorConstraints.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,837   copying build/lib/straindesign/strainDesignModule.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,839   copying build/lib/straindesign/__init__.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,844   copying build/lib/straindesign/lptools.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,848   copying build/lib/straindesign/strainDesignProblem.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,851   copying build/lib/straindesign/names.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,853   copying build/lib/straindesign/strainDesignSolutions.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,856   copying build/lib/straindesign/solver_interface.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,858   copying build/lib/straindesign/efmtool.jar -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,893   copying build/lib/straindesign/pool.py -> build/bdist.linux-armv7l/wheel/straindesign
2024-07-19T19:01:03,895   running install_egg_info
2024-07-19T19:01:03,958   running egg_info
2024-07-19T19:01:03,984   writing straindesign.egg-info/PKG-INFO
2024-07-19T19:01:03,986   writing dependency_links to straindesign.egg-info/dependency_links.txt
2024-07-19T19:01:03,988   writing requirements to straindesign.egg-info/requires.txt
2024-07-19T19:01:03,989   writing top-level names to straindesign.egg-info/top_level.txt
2024-07-19T19:01:04,018   reading manifest file 'straindesign.egg-info/SOURCES.txt'
2024-07-19T19:01:04,021   adding license file 'LICENSE'
2024-07-19T19:01:04,023   writing manifest file 'straindesign.egg-info/SOURCES.txt'
2024-07-19T19:01:04,025   Copying straindesign.egg-info to build/bdist.linux-armv7l/wheel/straindesign-1.12-py3.11.egg-info
2024-07-19T19:01:04,036   running install_scripts
2024-07-19T19:01:04,049   creating build/bdist.linux-armv7l/wheel/straindesign-1.12.dist-info/WHEEL
2024-07-19T19:01:04,052   creating '/tmp/pip-wheel-aket_i4u/straindesign-1.12-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-07-19T19:01:04,054   adding 'straindesign/__init__.py'
2024-07-19T19:01:04,057   adding 'straindesign/compute_strain_designs.py'
2024-07-19T19:01:04,060   adding 'straindesign/cplex_interface.py'
2024-07-19T19:01:04,326   adding 'straindesign/efmtool.jar'
2024-07-19T19:01:04,342   adding 'straindesign/efmtool.py'
2024-07-19T19:01:04,345   adding 'straindesign/glpk_interface.py'
2024-07-19T19:01:04,348   adding 'straindesign/gurobi_interface.py'
2024-07-19T19:01:04,349   adding 'straindesign/indicatorConstraints.py'
2024-07-19T19:01:04,354   adding 'straindesign/lptools.py'
2024-07-19T19:01:04,356   adding 'straindesign/names.py'
2024-07-19T19:01:04,362   adding 'straindesign/networktools.py'
2024-07-19T19:01:04,364   adding 'straindesign/parse_constr.py'
2024-07-19T19:01:04,366   adding 'straindesign/pool.py'
2024-07-19T19:01:04,369   adding 'straindesign/scip_interface.py'
2024-07-19T19:01:04,371   adding 'straindesign/solver_interface.py'
2024-07-19T19:01:04,374   adding 'straindesign/strainDesignMILP.py'
2024-07-19T19:01:04,377   adding 'straindesign/strainDesignModule.py'
2024-07-19T19:01:04,384   adding 'straindesign/strainDesignProblem.py'
2024-07-19T19:01:04,386   adding 'straindesign/strainDesignSolutions.py'
2024-07-19T19:01:04,389   adding 'tests/__init__.py'
2024-07-19T19:01:04,390   adding 'tests/conftest.py'
2024-07-19T19:01:04,391   adding 'tests/custom.py'
2024-07-19T19:01:04,393   adding 'tests/test_01_load_models_and_solvers.py'
2024-07-19T19:01:04,394   adding 'tests/test_02_lp_optimization.py'
2024-07-19T19:01:04,395   adding 'tests/test_03_plots.py'
2024-07-19T19:01:04,397   adding 'tests/test_04_preprocessing.py'
2024-07-19T19:01:04,398   adding 'tests/test_05_straindesign.py'
2024-07-19T19:01:04,400   adding 'straindesign-1.12.dist-info/LICENSE'
2024-07-19T19:01:04,402   adding 'straindesign-1.12.dist-info/METADATA'
2024-07-19T19:01:04,402   adding 'straindesign-1.12.dist-info/WHEEL'
2024-07-19T19:01:04,403   adding 'straindesign-1.12.dist-info/top_level.txt'
2024-07-19T19:01:04,404   adding 'straindesign-1.12.dist-info/RECORD'
2024-07-19T19:01:04,430   removing build/bdist.linux-armv7l/wheel
2024-07-19T19:01:04,559   Building wheel for straindesign (setup.py): finished with status 'done'
2024-07-19T19:01:04,583   Created wheel for straindesign: filename=straindesign-1.12-py3-none-any.whl size=2199022 sha256=d3748342f46ddea629d3f1bff51edf456270079d767860032a40467f0880452b
2024-07-19T19:01:04,584   Stored in directory: /tmp/pip-ephem-wheel-cache-9ez87rg6/wheels/25/06/5b/6a3d169af58220d4aa8ad9b26f2cdc3092dac4f4ebea131c73
2024-07-19T19:01:04,596 Successfully built straindesign
2024-07-19T19:01:04,659 Removed build tracker: '/tmp/pip-build-tracker-v8hd91vf'