2024-07-22T21:33:26,517 Created temporary directory: /tmp/pip-build-tracker-1c9zwujz 2024-07-22T21:33:26,518 Initialized build tracking at /tmp/pip-build-tracker-1c9zwujz 2024-07-22T21:33:26,518 Created build tracker: /tmp/pip-build-tracker-1c9zwujz 2024-07-22T21:33:26,518 Entered build tracker: /tmp/pip-build-tracker-1c9zwujz 2024-07-22T21:33:26,519 Created temporary directory: /tmp/pip-wheel-ze9gsx9c 2024-07-22T21:33:26,523 Created temporary directory: /tmp/pip-ephem-wheel-cache-wcksn8ca 2024-07-22T21:33:26,547 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-22T21:33:26,551 2 location(s) to search for versions of aind-mri-utils: 2024-07-22T21:33:26,551 * https://pypi.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,551 * https://www.piwheels.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,552 Fetching project page and analyzing links: https://pypi.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,552 Getting page https://pypi.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,554 Found index url https://pypi.org/simple/ 2024-07-22T21:33:26,606 Fetched page https://pypi.org/simple/aind-mri-utils/ as application/vnd.pypi.simple.v1+json 2024-07-22T21:33:26,607 Skipping link: No binaries permitted for aind-mri-utils: https://files.pythonhosted.org/packages/55/cc/2efa362cf8e6827439a7d7e27b0abbbf6857fde6f4edfc64c08db52f1f80/aind_mri_utils-0.0.24-py3-none-any.whl (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7) 2024-07-22T21:33:26,608 Found link https://files.pythonhosted.org/packages/49/5b/a04f9d3cbe56d000148934d027122da3dc013954b15374b734dc1fcbb330/aind_mri_utils-0.0.24.tar.gz (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7), version: 0.0.24 2024-07-22T21:33:26,608 Skipping link: No binaries permitted for aind-mri-utils: https://files.pythonhosted.org/packages/ff/8f/a85716968714be99922aefa2f523319faa0d6a324ee20728265db3993b0c/aind_mri_utils-0.0.25-py3-none-any.whl (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7) 2024-07-22T21:33:26,609 Found link https://files.pythonhosted.org/packages/eb/ee/027793ad2c56a832ab45d18f13dd74ac16b93d7dbdcad6e69491f86e6cd7/aind_mri_utils-0.0.25.tar.gz (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7), version: 0.0.25 2024-07-22T21:33:26,609 Fetching project page and analyzing links: https://www.piwheels.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,610 Getting page https://www.piwheels.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,611 Found index url https://www.piwheels.org/simple/ 2024-07-22T21:33:26,677 Fetched page https://www.piwheels.org/simple/aind-mri-utils/ as text/html 2024-07-22T21:33:26,678 Skipping link: No binaries permitted for aind-mri-utils: https://www.piwheels.org/simple/aind-mri-utils/aind_mri_utils-0.0.24-py3-none-any.whl#sha256=366c0e6bbf01cadf6135b0a5a6c410167194cb7fe669429321ef681c99bb4fd1 (from https://www.piwheels.org/simple/aind-mri-utils/) (requires-python:>=3.7) 2024-07-22T21:33:26,678 Skipping link: not a file: https://www.piwheels.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,678 Skipping link: not a file: https://pypi.org/simple/aind-mri-utils/ 2024-07-22T21:33:26,696 Given no hashes to check 1 links for project 'aind-mri-utils': discarding no candidates 2024-07-22T21:33:26,712 Collecting aind-mri-utils==0.0.25 2024-07-22T21:33:26,715 Created temporary directory: /tmp/pip-unpack-gn8lak80 2024-07-22T21:33:26,759 Downloading aind_mri_utils-0.0.25.tar.gz (67 kB) 2024-07-22T21:33:26,905 Added aind-mri-utils==0.0.25 from https://files.pythonhosted.org/packages/eb/ee/027793ad2c56a832ab45d18f13dd74ac16b93d7dbdcad6e69491f86e6cd7/aind_mri_utils-0.0.25.tar.gz to build tracker '/tmp/pip-build-tracker-1c9zwujz' 2024-07-22T21:33:26,911 Created temporary directory: /tmp/pip-build-env-mjgexww8 2024-07-22T21:33:26,921 Installing build dependencies: started 2024-07-22T21:33:26,922 Running command pip subprocess to install build dependencies 2024-07-22T21:33:28,079 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-07-22T21:33:28,595 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-22T21:33:30,082 Collecting setuptools 2024-07-22T21:33:30,083 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/51/a0/ee460cc54e68afcf33190d198299c9579a5eafeadef0016ae8563237ccb6/setuptools-71.1.0-py3-none-any.whl.metadata 2024-07-22T21:33:30,090 Using cached setuptools-71.1.0-py3-none-any.whl.metadata (6.6 kB) 2024-07-22T21:33:30,397 Collecting setuptools-scm 2024-07-22T21:33:30,413 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-07-22T21:33:30,826 Collecting packaging>=20 (from setuptools-scm) 2024-07-22T21:33:30,842 Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB) 2024-07-22T21:33:30,988 Collecting typing-extensions (from setuptools-scm) 2024-07-22T21:33:31,003 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.12.2-py3-none-any.whl (37 kB) 2024-07-22T21:33:31,114 Collecting tomli>=1 (from setuptools-scm) 2024-07-22T21:33:31,129 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2024-07-22T21:33:31,155 Using cached setuptools-71.1.0-py3-none-any.whl (2.3 MB) 2024-07-22T21:33:32,955 Installing collected packages: typing-extensions, tomli, setuptools, packaging, setuptools-scm 2024-07-22T21:33:37,395 Successfully installed packaging-24.1 setuptools-71.1.0 setuptools-scm-8.1.0 tomli-2.0.1 typing-extensions-4.12.2 2024-07-22T21:33:37,576 [notice] A new release of pip is available: 24.0 -> 24.1.2 2024-07-22T21:33:37,576 [notice] To update, run: python3 -m pip install --upgrade pip 2024-07-22T21:33:37,873 Installing build dependencies: finished with status 'done' 2024-07-22T21:33:37,877 Getting requirements to build wheel: started 2024-07-22T21:33:37,878 Running command Getting requirements to build wheel 2024-07-22T21:33:38,795 running egg_info 2024-07-22T21:33:38,803 writing src/aind_mri_utils.egg-info/PKG-INFO 2024-07-22T21:33:38,810 writing dependency_links to src/aind_mri_utils.egg-info/dependency_links.txt 2024-07-22T21:33:38,813 writing requirements to src/aind_mri_utils.egg-info/requires.txt 2024-07-22T21:33:38,815 writing top-level names to src/aind_mri_utils.egg-info/top_level.txt 2024-07-22T21:33:38,875 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-22T21:33:38,884 reading manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:38,888 adding license file 'LICENSE' 2024-07-22T21:33:38,893 writing manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:39,003 Getting requirements to build wheel: finished with status 'done' 2024-07-22T21:33:39,007 Created temporary directory: /tmp/pip-modern-metadata-xkgu9hjr 2024-07-22T21:33:39,010 Preparing metadata (pyproject.toml): started 2024-07-22T21:33:39,011 Running command Preparing metadata (pyproject.toml) 2024-07-22T21:33:39,883 running dist_info 2024-07-22T21:33:39,892 creating /tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info 2024-07-22T21:33:39,900 writing /tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/PKG-INFO 2024-07-22T21:33:39,907 writing dependency_links to /tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/dependency_links.txt 2024-07-22T21:33:39,910 writing requirements to /tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/requires.txt 2024-07-22T21:33:39,911 writing top-level names to /tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/top_level.txt 2024-07-22T21:33:39,913 writing manifest file '/tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:39,968 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-22T21:33:39,977 reading manifest file '/tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:39,980 adding license file 'LICENSE' 2024-07-22T21:33:39,983 writing manifest file '/tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:39,984 creating '/tmp/pip-modern-metadata-xkgu9hjr/aind_mri_utils-0.0.25.dist-info' 2024-07-22T21:33:40,127 Preparing metadata (pyproject.toml): finished with status 'done' 2024-07-22T21:33:40,133 Source in /tmp/pip-wheel-ze9gsx9c/aind-mri-utils_5d4bd274c37a4ad38d5bd5ef8102202b has version 0.0.25, which satisfies requirement aind-mri-utils==0.0.25 from https://files.pythonhosted.org/packages/eb/ee/027793ad2c56a832ab45d18f13dd74ac16b93d7dbdcad6e69491f86e6cd7/aind_mri_utils-0.0.25.tar.gz 2024-07-22T21:33:40,134 Removed aind-mri-utils==0.0.25 from https://files.pythonhosted.org/packages/eb/ee/027793ad2c56a832ab45d18f13dd74ac16b93d7dbdcad6e69491f86e6cd7/aind_mri_utils-0.0.25.tar.gz from build tracker '/tmp/pip-build-tracker-1c9zwujz' 2024-07-22T21:33:40,140 Created temporary directory: /tmp/pip-unpack-tf_rnnfd 2024-07-22T21:33:40,141 Created temporary directory: /tmp/pip-unpack-i9jz34ac 2024-07-22T21:33:40,176 Building wheels for collected packages: aind-mri-utils 2024-07-22T21:33:40,181 Created temporary directory: /tmp/pip-wheel-s08hcy3u 2024-07-22T21:33:40,181 Destination directory: /tmp/pip-wheel-s08hcy3u 2024-07-22T21:33:40,183 Building wheel for aind-mri-utils (pyproject.toml): started 2024-07-22T21:33:40,184 Running command Building wheel for aind-mri-utils (pyproject.toml) 2024-07-22T21:33:41,012 running bdist_wheel 2024-07-22T21:33:41,050 running build 2024-07-22T21:33:41,050 running build_py 2024-07-22T21:33:41,059 creating build 2024-07-22T21:33:41,060 creating build/lib 2024-07-22T21:33:41,060 creating build/lib/aind_mri_utils 2024-07-22T21:33:41,061 copying src/aind_mri_utils/plots.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,063 copying src/aind_mri_utils/optimization.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,065 copying src/aind_mri_utils/__init__.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,067 copying src/aind_mri_utils/coordinate_systems.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,069 copying src/aind_mri_utils/reticle_calibrations.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,071 copying src/aind_mri_utils/headframe_rotation.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,074 copying src/aind_mri_utils/manual_keypoints.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,075 copying src/aind_mri_utils/measurement.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,077 copying src/aind_mri_utils/sitk_volume.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,079 copying src/aind_mri_utils/utils.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,081 copying src/aind_mri_utils/rotations.py -> build/lib/aind_mri_utils 2024-07-22T21:33:41,084 creating build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,085 copying src/aind_mri_utils/file_io/slicer_files.py -> build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,087 copying src/aind_mri_utils/file_io/__init__.py -> build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,088 copying src/aind_mri_utils/file_io/obj_files.py -> build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,090 copying src/aind_mri_utils/file_io/simpleitk.py -> build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,092 copying src/aind_mri_utils/file_io/image_files.py -> build/lib/aind_mri_utils/file_io 2024-07-22T21:33:41,093 running egg_info 2024-07-22T21:33:41,101 writing src/aind_mri_utils.egg-info/PKG-INFO 2024-07-22T21:33:41,107 writing dependency_links to src/aind_mri_utils.egg-info/dependency_links.txt 2024-07-22T21:33:41,110 writing requirements to src/aind_mri_utils.egg-info/requires.txt 2024-07-22T21:33:41,111 writing top-level names to src/aind_mri_utils.egg-info/top_level.txt 2024-07-22T21:33:41,152 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-07-22T21:33:41,160 reading manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:41,163 adding license file 'LICENSE' 2024-07-22T21:33:41,168 writing manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt' 2024-07-22T21:33:41,189 installing to build/bdist.linux-armv7l/wheel 2024-07-22T21:33:41,189 running install 2024-07-22T21:33:41,215 running install_lib 2024-07-22T21:33:41,224 creating build/bdist.linux-armv7l 2024-07-22T21:33:41,224 creating build/bdist.linux-armv7l/wheel 2024-07-22T21:33:41,226 creating build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,227 copying build/lib/aind_mri_utils/plots.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,229 copying build/lib/aind_mri_utils/optimization.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,231 copying build/lib/aind_mri_utils/__init__.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,233 copying build/lib/aind_mri_utils/coordinate_systems.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,235 copying build/lib/aind_mri_utils/reticle_calibrations.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,237 copying build/lib/aind_mri_utils/headframe_rotation.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,240 copying build/lib/aind_mri_utils/manual_keypoints.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,242 copying build/lib/aind_mri_utils/measurement.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,244 copying build/lib/aind_mri_utils/sitk_volume.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,246 creating build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,247 copying build/lib/aind_mri_utils/file_io/slicer_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,249 copying build/lib/aind_mri_utils/file_io/__init__.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,251 copying build/lib/aind_mri_utils/file_io/obj_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,253 copying build/lib/aind_mri_utils/file_io/simpleitk.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,255 copying build/lib/aind_mri_utils/file_io/image_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io 2024-07-22T21:33:41,257 copying build/lib/aind_mri_utils/utils.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,259 copying build/lib/aind_mri_utils/rotations.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils 2024-07-22T21:33:41,261 running install_egg_info 2024-07-22T21:33:41,269 Copying src/aind_mri_utils.egg-info to build/bdist.linux-armv7l/wheel/aind_mri_utils-0.0.25-py3.9.egg-info 2024-07-22T21:33:41,278 running install_scripts 2024-07-22T21:33:41,296 creating build/bdist.linux-armv7l/wheel/aind_mri_utils-0.0.25.dist-info/WHEEL 2024-07-22T21:33:41,298 creating '/tmp/pip-wheel-s08hcy3u/.tmp-gmrl6b6r/aind_mri_utils-0.0.25-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-22T21:33:41,300 adding 'aind_mri_utils/__init__.py' 2024-07-22T21:33:41,302 adding 'aind_mri_utils/coordinate_systems.py' 2024-07-22T21:33:41,305 adding 'aind_mri_utils/headframe_rotation.py' 2024-07-22T21:33:41,307 adding 'aind_mri_utils/manual_keypoints.py' 2024-07-22T21:33:41,308 adding 'aind_mri_utils/measurement.py' 2024-07-22T21:33:41,310 adding 'aind_mri_utils/optimization.py' 2024-07-22T21:33:41,312 adding 'aind_mri_utils/plots.py' 2024-07-22T21:33:41,314 adding 'aind_mri_utils/reticle_calibrations.py' 2024-07-22T21:33:41,315 adding 'aind_mri_utils/rotations.py' 2024-07-22T21:33:41,317 adding 'aind_mri_utils/sitk_volume.py' 2024-07-22T21:33:41,318 adding 'aind_mri_utils/utils.py' 2024-07-22T21:33:41,320 adding 'aind_mri_utils/file_io/__init__.py' 2024-07-22T21:33:41,321 adding 'aind_mri_utils/file_io/image_files.py' 2024-07-22T21:33:41,323 adding 'aind_mri_utils/file_io/obj_files.py' 2024-07-22T21:33:41,324 adding 'aind_mri_utils/file_io/simpleitk.py' 2024-07-22T21:33:41,326 adding 'aind_mri_utils/file_io/slicer_files.py' 2024-07-22T21:33:41,328 adding 'aind_mri_utils-0.0.25.dist-info/LICENSE' 2024-07-22T21:33:41,329 adding 'aind_mri_utils-0.0.25.dist-info/METADATA' 2024-07-22T21:33:41,330 adding 'aind_mri_utils-0.0.25.dist-info/WHEEL' 2024-07-22T21:33:41,331 adding 'aind_mri_utils-0.0.25.dist-info/top_level.txt' 2024-07-22T21:33:41,332 adding 'aind_mri_utils-0.0.25.dist-info/RECORD' 2024-07-22T21:33:41,334 removing build/bdist.linux-armv7l/wheel 2024-07-22T21:33:41,447 Building wheel for aind-mri-utils (pyproject.toml): finished with status 'done' 2024-07-22T21:33:41,453 Created wheel for aind-mri-utils: filename=aind_mri_utils-0.0.25-py3-none-any.whl size=34312 sha256=e806f7d46d41aaebbcf8c1506a11e6085fc4c45f104d210e2778a570d6cadcca 2024-07-22T21:33:41,454 Stored in directory: /tmp/pip-ephem-wheel-cache-wcksn8ca/wheels/3a/4e/40/1df19cb1ae5d117f59bcb773231a739603b1157e06476e0fc3 2024-07-22T21:33:41,466 Successfully built aind-mri-utils 2024-07-22T21:33:41,471 Removed build tracker: '/tmp/pip-build-tracker-1c9zwujz'