2024-07-22T23:12:02,412 Created temporary directory: /tmp/pip-build-tracker-d8v4looc
2024-07-22T23:12:02,413 Initialized build tracking at /tmp/pip-build-tracker-d8v4looc
2024-07-22T23:12:02,413 Created build tracker: /tmp/pip-build-tracker-d8v4looc
2024-07-22T23:12:02,414 Entered build tracker: /tmp/pip-build-tracker-d8v4looc
2024-07-22T23:12:02,414 Created temporary directory: /tmp/pip-wheel-iuvkr86y
2024-07-22T23:12:02,419 Created temporary directory: /tmp/pip-ephem-wheel-cache-_r6jbsbn
2024-07-22T23:12:02,444 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-22T23:12:02,448 2 location(s) to search for versions of aind-mri-utils:
2024-07-22T23:12:02,448 * https://pypi.org/simple/aind-mri-utils/
2024-07-22T23:12:02,448 * https://www.piwheels.org/simple/aind-mri-utils/
2024-07-22T23:12:02,449 Fetching project page and analyzing links: https://pypi.org/simple/aind-mri-utils/
2024-07-22T23:12:02,449 Getting page https://pypi.org/simple/aind-mri-utils/
2024-07-22T23:12:02,451 Found index url https://pypi.org/simple/
2024-07-22T23:12:02,503 Fetched page https://pypi.org/simple/aind-mri-utils/ as application/vnd.pypi.simple.v1+json
2024-07-22T23:12:02,505   Skipping link: No binaries permitted for aind-mri-utils: https://files.pythonhosted.org/packages/55/cc/2efa362cf8e6827439a7d7e27b0abbbf6857fde6f4edfc64c08db52f1f80/aind_mri_utils-0.0.24-py3-none-any.whl (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7)
2024-07-22T23:12:02,506   Found link https://files.pythonhosted.org/packages/49/5b/a04f9d3cbe56d000148934d027122da3dc013954b15374b734dc1fcbb330/aind_mri_utils-0.0.24.tar.gz (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7), version: 0.0.24
2024-07-22T23:12:02,506   Skipping link: No binaries permitted for aind-mri-utils: https://files.pythonhosted.org/packages/ff/8f/a85716968714be99922aefa2f523319faa0d6a324ee20728265db3993b0c/aind_mri_utils-0.0.25-py3-none-any.whl (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7)
2024-07-22T23:12:02,507   Found link https://files.pythonhosted.org/packages/eb/ee/027793ad2c56a832ab45d18f13dd74ac16b93d7dbdcad6e69491f86e6cd7/aind_mri_utils-0.0.25.tar.gz (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7), version: 0.0.25
2024-07-22T23:12:02,507   Skipping link: No binaries permitted for aind-mri-utils: https://files.pythonhosted.org/packages/23/2f/7ea61dc637f7cb42d068823825a6ddc24e2cc4e1f2f06dabb75c6c5f54ff/aind_mri_utils-0.0.26-py3-none-any.whl (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7)
2024-07-22T23:12:02,508   Found link https://files.pythonhosted.org/packages/3f/36/27b62e644e35085f8ae6a59b472298a58b37abbb06a9aedbea610ea3e8ec/aind_mri_utils-0.0.26.tar.gz (from https://pypi.org/simple/aind-mri-utils/) (requires-python:>=3.7), version: 0.0.26
2024-07-22T23:12:02,508 Fetching project page and analyzing links: https://www.piwheels.org/simple/aind-mri-utils/
2024-07-22T23:12:02,508 Getting page https://www.piwheels.org/simple/aind-mri-utils/
2024-07-22T23:12:02,509 Found index url https://www.piwheels.org/simple/
2024-07-22T23:12:02,577 Fetched page https://www.piwheels.org/simple/aind-mri-utils/ as text/html
2024-07-22T23:12:02,578   Skipping link: No binaries permitted for aind-mri-utils: https://www.piwheels.org/simple/aind-mri-utils/aind_mri_utils-0.0.25-py3-none-any.whl#sha256=e806f7d46d41aaebbcf8c1506a11e6085fc4c45f104d210e2778a570d6cadcca (from https://www.piwheels.org/simple/aind-mri-utils/) (requires-python:>=3.7)
2024-07-22T23:12:02,579   Skipping link: No binaries permitted for aind-mri-utils: https://www.piwheels.org/simple/aind-mri-utils/aind_mri_utils-0.0.24-py3-none-any.whl#sha256=366c0e6bbf01cadf6135b0a5a6c410167194cb7fe669429321ef681c99bb4fd1 (from https://www.piwheels.org/simple/aind-mri-utils/) (requires-python:>=3.7)
2024-07-22T23:12:02,579 Skipping link: not a file: https://www.piwheels.org/simple/aind-mri-utils/
2024-07-22T23:12:02,579 Skipping link: not a file: https://pypi.org/simple/aind-mri-utils/
2024-07-22T23:12:02,597 Given no hashes to check 1 links for project 'aind-mri-utils': discarding no candidates
2024-07-22T23:12:02,614 Collecting aind-mri-utils==0.0.26
2024-07-22T23:12:02,616   Created temporary directory: /tmp/pip-unpack-sreh8fpe
2024-07-22T23:12:02,660   Downloading aind_mri_utils-0.0.26.tar.gz (67 kB)
2024-07-22T23:12:02,808   Added aind-mri-utils==0.0.26 from https://files.pythonhosted.org/packages/3f/36/27b62e644e35085f8ae6a59b472298a58b37abbb06a9aedbea610ea3e8ec/aind_mri_utils-0.0.26.tar.gz to build tracker '/tmp/pip-build-tracker-d8v4looc'
2024-07-22T23:12:02,813   Created temporary directory: /tmp/pip-build-env-2h1hkyvv
2024-07-22T23:12:02,823   Installing build dependencies: started
2024-07-22T23:12:02,824   Running command pip subprocess to install build dependencies
2024-07-22T23:12:03,988   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-07-22T23:12:04,514   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-07-22T23:12:06,006   Collecting setuptools
2024-07-22T23:12:06,007     Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/51/a0/ee460cc54e68afcf33190d198299c9579a5eafeadef0016ae8563237ccb6/setuptools-71.1.0-py3-none-any.whl.metadata
2024-07-22T23:12:06,014     Using cached setuptools-71.1.0-py3-none-any.whl.metadata (6.6 kB)
2024-07-22T23:12:06,322   Collecting setuptools-scm
2024-07-22T23:12:06,339     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.1.0-py3-none-any.whl (43 kB)
2024-07-22T23:12:06,757   Collecting packaging>=20 (from setuptools-scm)
2024-07-22T23:12:06,774     Using cached https://www.piwheels.org/simple/packaging/packaging-24.1-py3-none-any.whl (53 kB)
2024-07-22T23:12:06,919   Collecting typing-extensions (from setuptools-scm)
2024-07-22T23:12:06,938     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.12.2-py3-none-any.whl (37 kB)
2024-07-22T23:12:07,053   Collecting tomli>=1 (from setuptools-scm)
2024-07-22T23:12:07,069     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2024-07-22T23:12:07,095   Using cached setuptools-71.1.0-py3-none-any.whl (2.3 MB)
2024-07-22T23:12:08,884   Installing collected packages: typing-extensions, tomli, setuptools, packaging, setuptools-scm
2024-07-22T23:12:13,368   Successfully installed packaging-24.1 setuptools-71.1.0 setuptools-scm-8.1.0 tomli-2.0.1 typing-extensions-4.12.2

2024-07-22T23:12:13,549   [notice] A new release of pip is available: 24.0 -> 24.1.2
2024-07-22T23:12:13,549   [notice] To update, run: python3 -m pip install --upgrade pip
2024-07-22T23:12:13,841   Installing build dependencies: finished with status 'done'
2024-07-22T23:12:13,846   Getting requirements to build wheel: started
2024-07-22T23:12:13,848   Running command Getting requirements to build wheel
2024-07-22T23:12:14,790   running egg_info
2024-07-22T23:12:14,799   writing src/aind_mri_utils.egg-info/PKG-INFO
2024-07-22T23:12:14,806   writing dependency_links to src/aind_mri_utils.egg-info/dependency_links.txt
2024-07-22T23:12:14,809   writing requirements to src/aind_mri_utils.egg-info/requires.txt
2024-07-22T23:12:14,811   writing top-level names to src/aind_mri_utils.egg-info/top_level.txt
2024-07-22T23:12:14,871   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-07-22T23:12:14,881   reading manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:14,885   adding license file 'LICENSE'
2024-07-22T23:12:14,890   writing manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:14,998   Getting requirements to build wheel: finished with status 'done'
2024-07-22T23:12:15,002   Created temporary directory: /tmp/pip-modern-metadata-439qtiun
2024-07-22T23:12:15,005   Preparing metadata (pyproject.toml): started
2024-07-22T23:12:15,006   Running command Preparing metadata (pyproject.toml)
2024-07-22T23:12:15,875   running dist_info
2024-07-22T23:12:15,885   creating /tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info
2024-07-22T23:12:15,893   writing /tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/PKG-INFO
2024-07-22T23:12:15,900   writing dependency_links to /tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/dependency_links.txt
2024-07-22T23:12:15,904   writing requirements to /tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/requires.txt
2024-07-22T23:12:15,905   writing top-level names to /tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/top_level.txt
2024-07-22T23:12:15,906   writing manifest file '/tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:15,963   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-07-22T23:12:15,971   reading manifest file '/tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:15,974   adding license file 'LICENSE'
2024-07-22T23:12:15,977   writing manifest file '/tmp/pip-modern-metadata-439qtiun/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:15,978   creating '/tmp/pip-modern-metadata-439qtiun/aind_mri_utils-0.0.26.dist-info'
2024-07-22T23:12:16,121   Preparing metadata (pyproject.toml): finished with status 'done'
2024-07-22T23:12:16,128   Source in /tmp/pip-wheel-iuvkr86y/aind-mri-utils_5a70792ff727475aa0cfe100fdf8f160 has version 0.0.26, which satisfies requirement aind-mri-utils==0.0.26 from https://files.pythonhosted.org/packages/3f/36/27b62e644e35085f8ae6a59b472298a58b37abbb06a9aedbea610ea3e8ec/aind_mri_utils-0.0.26.tar.gz
2024-07-22T23:12:16,129   Removed aind-mri-utils==0.0.26 from https://files.pythonhosted.org/packages/3f/36/27b62e644e35085f8ae6a59b472298a58b37abbb06a9aedbea610ea3e8ec/aind_mri_utils-0.0.26.tar.gz from build tracker '/tmp/pip-build-tracker-d8v4looc'
2024-07-22T23:12:16,135 Created temporary directory: /tmp/pip-unpack-wsodj_yx
2024-07-22T23:12:16,135 Created temporary directory: /tmp/pip-unpack-70x37_rq
2024-07-22T23:12:16,170 Building wheels for collected packages: aind-mri-utils
2024-07-22T23:12:16,174   Created temporary directory: /tmp/pip-wheel-404bqgd2
2024-07-22T23:12:16,175   Destination directory: /tmp/pip-wheel-404bqgd2
2024-07-22T23:12:16,177   Building wheel for aind-mri-utils (pyproject.toml): started
2024-07-22T23:12:16,178   Running command Building wheel for aind-mri-utils (pyproject.toml)
2024-07-22T23:12:17,045   running bdist_wheel
2024-07-22T23:12:17,083   running build
2024-07-22T23:12:17,083   running build_py
2024-07-22T23:12:17,092   creating build
2024-07-22T23:12:17,093   creating build/lib
2024-07-22T23:12:17,094   creating build/lib/aind_mri_utils
2024-07-22T23:12:17,095   copying src/aind_mri_utils/measurement.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,097   copying src/aind_mri_utils/rotations.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,099   copying src/aind_mri_utils/sitk_volume.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,101   copying src/aind_mri_utils/headframe_rotation.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,104   copying src/aind_mri_utils/__init__.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,106   copying src/aind_mri_utils/utils.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,107   copying src/aind_mri_utils/reticle_calibrations.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,109   copying src/aind_mri_utils/coordinate_systems.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,112   copying src/aind_mri_utils/plots.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,113   copying src/aind_mri_utils/optimization.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,116   copying src/aind_mri_utils/manual_keypoints.py -> build/lib/aind_mri_utils
2024-07-22T23:12:17,118   creating build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,119   copying src/aind_mri_utils/file_io/simpleitk.py -> build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,121   copying src/aind_mri_utils/file_io/obj_files.py -> build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,123   copying src/aind_mri_utils/file_io/image_files.py -> build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,125   copying src/aind_mri_utils/file_io/__init__.py -> build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,126   copying src/aind_mri_utils/file_io/slicer_files.py -> build/lib/aind_mri_utils/file_io
2024-07-22T23:12:17,128   running egg_info
2024-07-22T23:12:17,136   writing src/aind_mri_utils.egg-info/PKG-INFO
2024-07-22T23:12:17,142   writing dependency_links to src/aind_mri_utils.egg-info/dependency_links.txt
2024-07-22T23:12:17,145   writing requirements to src/aind_mri_utils.egg-info/requires.txt
2024-07-22T23:12:17,147   writing top-level names to src/aind_mri_utils.egg-info/top_level.txt
2024-07-22T23:12:17,187   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-07-22T23:12:17,195   reading manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:17,198   adding license file 'LICENSE'
2024-07-22T23:12:17,203   writing manifest file 'src/aind_mri_utils.egg-info/SOURCES.txt'
2024-07-22T23:12:17,225   installing to build/bdist.linux-armv7l/wheel
2024-07-22T23:12:17,225   running install
2024-07-22T23:12:17,250   running install_lib
2024-07-22T23:12:17,259   creating build/bdist.linux-armv7l
2024-07-22T23:12:17,259   creating build/bdist.linux-armv7l/wheel
2024-07-22T23:12:17,261   creating build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,262   copying build/lib/aind_mri_utils/measurement.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,265   copying build/lib/aind_mri_utils/rotations.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,267   creating build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,268   copying build/lib/aind_mri_utils/file_io/simpleitk.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,271   copying build/lib/aind_mri_utils/file_io/obj_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,273   copying build/lib/aind_mri_utils/file_io/image_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,275   copying build/lib/aind_mri_utils/file_io/__init__.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,277   copying build/lib/aind_mri_utils/file_io/slicer_files.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils/file_io
2024-07-22T23:12:17,279   copying build/lib/aind_mri_utils/sitk_volume.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,281   copying build/lib/aind_mri_utils/headframe_rotation.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,284   copying build/lib/aind_mri_utils/__init__.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,285   copying build/lib/aind_mri_utils/utils.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,288   copying build/lib/aind_mri_utils/reticle_calibrations.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,291   copying build/lib/aind_mri_utils/coordinate_systems.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,293   copying build/lib/aind_mri_utils/plots.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,295   copying build/lib/aind_mri_utils/optimization.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,297   copying build/lib/aind_mri_utils/manual_keypoints.py -> build/bdist.linux-armv7l/wheel/aind_mri_utils
2024-07-22T23:12:17,299   running install_egg_info
2024-07-22T23:12:17,307   Copying src/aind_mri_utils.egg-info to build/bdist.linux-armv7l/wheel/aind_mri_utils-0.0.26-py3.9.egg-info
2024-07-22T23:12:17,317   running install_scripts
2024-07-22T23:12:17,335   creating build/bdist.linux-armv7l/wheel/aind_mri_utils-0.0.26.dist-info/WHEEL
2024-07-22T23:12:17,338   creating '/tmp/pip-wheel-404bqgd2/.tmp-t4dt1g54/aind_mri_utils-0.0.26-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-07-22T23:12:17,341   adding 'aind_mri_utils/__init__.py'
2024-07-22T23:12:17,342   adding 'aind_mri_utils/coordinate_systems.py'
2024-07-22T23:12:17,345   adding 'aind_mri_utils/headframe_rotation.py'
2024-07-22T23:12:17,347   adding 'aind_mri_utils/manual_keypoints.py'
2024-07-22T23:12:17,348   adding 'aind_mri_utils/measurement.py'
2024-07-22T23:12:17,351   adding 'aind_mri_utils/optimization.py'
2024-07-22T23:12:17,352   adding 'aind_mri_utils/plots.py'
2024-07-22T23:12:17,354   adding 'aind_mri_utils/reticle_calibrations.py'
2024-07-22T23:12:17,356   adding 'aind_mri_utils/rotations.py'
2024-07-22T23:12:17,358   adding 'aind_mri_utils/sitk_volume.py'
2024-07-22T23:12:17,359   adding 'aind_mri_utils/utils.py'
2024-07-22T23:12:17,361   adding 'aind_mri_utils/file_io/__init__.py'
2024-07-22T23:12:17,362   adding 'aind_mri_utils/file_io/image_files.py'
2024-07-22T23:12:17,363   adding 'aind_mri_utils/file_io/obj_files.py'
2024-07-22T23:12:17,365   adding 'aind_mri_utils/file_io/simpleitk.py'
2024-07-22T23:12:17,367   adding 'aind_mri_utils/file_io/slicer_files.py'
2024-07-22T23:12:17,369   adding 'aind_mri_utils-0.0.26.dist-info/LICENSE'
2024-07-22T23:12:17,371   adding 'aind_mri_utils-0.0.26.dist-info/METADATA'
2024-07-22T23:12:17,372   adding 'aind_mri_utils-0.0.26.dist-info/WHEEL'
2024-07-22T23:12:17,373   adding 'aind_mri_utils-0.0.26.dist-info/top_level.txt'
2024-07-22T23:12:17,374   adding 'aind_mri_utils-0.0.26.dist-info/RECORD'
2024-07-22T23:12:17,375   removing build/bdist.linux-armv7l/wheel
2024-07-22T23:12:17,490   Building wheel for aind-mri-utils (pyproject.toml): finished with status 'done'
2024-07-22T23:12:17,497   Created wheel for aind-mri-utils: filename=aind_mri_utils-0.0.26-py3-none-any.whl size=34311 sha256=0998329b52f371ba905f5051d092a84b9a8075df605d2843412025c3e656c9a7
2024-07-22T23:12:17,498   Stored in directory: /tmp/pip-ephem-wheel-cache-_r6jbsbn/wheels/b6/a9/b4/253c35c2b23568324d951a3c8f19b4e13b1dbb314e1e7cd39e
2024-07-22T23:12:17,511 Successfully built aind-mri-utils
2024-07-22T23:12:17,515 Removed build tracker: '/tmp/pip-build-tracker-d8v4looc'