2024-07-29T19:20:10,136 Created temporary directory: /tmp/pip-build-tracker-hrt_1v02 2024-07-29T19:20:10,137 Initialized build tracking at /tmp/pip-build-tracker-hrt_1v02 2024-07-29T19:20:10,138 Created build tracker: /tmp/pip-build-tracker-hrt_1v02 2024-07-29T19:20:10,138 Entered build tracker: /tmp/pip-build-tracker-hrt_1v02 2024-07-29T19:20:10,139 Created temporary directory: /tmp/pip-wheel-wl0u7_0f 2024-07-29T19:20:10,143 Created temporary directory: /tmp/pip-ephem-wheel-cache-0umoip1p 2024-07-29T19:20:10,173 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-07-29T19:20:10,176 2 location(s) to search for versions of pyhmmsearch: 2024-07-29T19:20:10,176 * https://pypi.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,176 * https://www.piwheels.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,177 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,178 Getting page https://pypi.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,179 Found index url https://pypi.org/simple/ 2024-07-29T19:20:10,276 Fetched page https://pypi.org/simple/pyhmmsearch/ as application/vnd.pypi.simple.v1+json 2024-07-29T19:20:10,278 Found link https://files.pythonhosted.org/packages/7c/cd/98e7487244f17f47d7a59a6a51cb8cb802bc528f21fbb62eb7ed2dda2452/pyhmmsearch-2024.4.25.tar.gz (from https://pypi.org/simple/pyhmmsearch/), version: 2024.4.25 2024-07-29T19:20:10,279 Found link https://files.pythonhosted.org/packages/34/bf/bc47f02347063541a81bd46209fb17b6875ab825d8cf68b9c816b8cf3cef/pyhmmsearch-2024.6.6.tar.gz (from https://pypi.org/simple/pyhmmsearch/), version: 2024.6.6 2024-07-29T19:20:10,279 Found link https://files.pythonhosted.org/packages/c6/d7/463abf0dfa0f0a9b16ac48c227f3d01f1f508a5c2c4585e7a646e61674bf/pyhmmsearch-2024.6.7.tar.gz (from https://pypi.org/simple/pyhmmsearch/), version: 2024.6.7 2024-07-29T19:20:10,280 Found link https://files.pythonhosted.org/packages/57/74/322d4c5a5b7be11bef316d94eca10dbda1c119538ad59a9862934d486086/pyhmmsearch-2024.6.8.tar.gz (from https://pypi.org/simple/pyhmmsearch/), version: 2024.6.8 2024-07-29T19:20:10,281 Found link https://files.pythonhosted.org/packages/10/73/e68e753b30def427e22ffb413e813263a9e3e633dcbd0492e18a2e2f49ed/pyhmmsearch-2024.7.29.tar.gz (from https://pypi.org/simple/pyhmmsearch/), version: 2024.7.29 2024-07-29T19:20:10,281 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,282 Getting page https://www.piwheels.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,283 Found index url https://www.piwheels.org/simple/ 2024-07-29T19:20:10,333 Fetched page https://www.piwheels.org/simple/pyhmmsearch/ as text/html 2024-07-29T19:20:10,335 Skipping link: No binaries permitted for pyhmmsearch: https://www.piwheels.org/simple/pyhmmsearch/pyhmmsearch-2024.6.8-py3-none-any.whl#sha256=2aa87c32caa940ba9258c008b0068c85476ac26751885c44e8e88dd68d9b9a69 (from https://www.piwheels.org/simple/pyhmmsearch/) 2024-07-29T19:20:10,336 Skipping link: No binaries permitted for pyhmmsearch: https://www.piwheels.org/simple/pyhmmsearch/pyhmmsearch-2024.6.7-py3-none-any.whl#sha256=73b2ec6860fddad0f9486a3b2f37c53deec4318fa9e24e8e359c45258faf6749 (from https://www.piwheels.org/simple/pyhmmsearch/) 2024-07-29T19:20:10,337 Skipping link: No binaries permitted for pyhmmsearch: https://www.piwheels.org/simple/pyhmmsearch/pyhmmsearch-2024.6.6-py3-none-any.whl#sha256=879f7399d9f7a37b49e15a398ec51a93dd4a3685b0767a3d86f62fc23f4e5269 (from https://www.piwheels.org/simple/pyhmmsearch/) 2024-07-29T19:20:10,337 Skipping link: No binaries permitted for pyhmmsearch: https://www.piwheels.org/simple/pyhmmsearch/pyhmmsearch-2024.4.25-py3-none-any.whl#sha256=a394d806d600287765c3dd15b625b7f3e7b6c6d78c1155da6441060ceb803f6f (from https://www.piwheels.org/simple/pyhmmsearch/) 2024-07-29T19:20:10,338 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,338 Skipping link: not a file: https://pypi.org/simple/pyhmmsearch/ 2024-07-29T19:20:10,357 Given no hashes to check 1 links for project 'pyhmmsearch': discarding no candidates 2024-07-29T19:20:10,376 Collecting pyhmmsearch==2024.7.29 2024-07-29T19:20:10,378 Created temporary directory: /tmp/pip-unpack-i2g46xi7 2024-07-29T19:20:10,473 Downloading pyhmmsearch-2024.7.29.tar.gz (8.7 kB) 2024-07-29T19:20:10,508 Added pyhmmsearch==2024.7.29 from https://files.pythonhosted.org/packages/10/73/e68e753b30def427e22ffb413e813263a9e3e633dcbd0492e18a2e2f49ed/pyhmmsearch-2024.7.29.tar.gz to build tracker '/tmp/pip-build-tracker-hrt_1v02' 2024-07-29T19:20:10,510 Running setup.py (path:/tmp/pip-wheel-wl0u7_0f/pyhmmsearch_359d9eac057f4e9ea2a10d0daab44099/setup.py) egg_info for package pyhmmsearch 2024-07-29T19:20:10,511 Created temporary directory: /tmp/pip-pip-egg-info-uqddgyb5 2024-07-29T19:20:10,511 Preparing metadata (setup.py): started 2024-07-29T19:20:10,513 Running command python setup.py egg_info 2024-07-29T19:20:11,667 running egg_info 2024-07-29T19:20:11,668 creating /tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info 2024-07-29T19:20:11,696 writing /tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/PKG-INFO 2024-07-29T19:20:11,699 writing dependency_links to /tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/dependency_links.txt 2024-07-29T19:20:11,701 writing requirements to /tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/requires.txt 2024-07-29T19:20:11,702 writing top-level names to /tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/top_level.txt 2024-07-29T19:20:11,703 writing manifest file '/tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/SOURCES.txt' 2024-07-29T19:20:11,818 reading manifest file '/tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/SOURCES.txt' 2024-07-29T19:20:11,820 adding license file 'LICENSE' 2024-07-29T19:20:11,822 writing manifest file '/tmp/pip-pip-egg-info-uqddgyb5/pyhmmsearch.egg-info/SOURCES.txt' 2024-07-29T19:20:11,935 Preparing metadata (setup.py): finished with status 'done' 2024-07-29T19:20:11,939 Source in /tmp/pip-wheel-wl0u7_0f/pyhmmsearch_359d9eac057f4e9ea2a10d0daab44099 has version 2024.7.29, which satisfies requirement pyhmmsearch==2024.7.29 from https://files.pythonhosted.org/packages/10/73/e68e753b30def427e22ffb413e813263a9e3e633dcbd0492e18a2e2f49ed/pyhmmsearch-2024.7.29.tar.gz 2024-07-29T19:20:11,940 Removed pyhmmsearch==2024.7.29 from https://files.pythonhosted.org/packages/10/73/e68e753b30def427e22ffb413e813263a9e3e633dcbd0492e18a2e2f49ed/pyhmmsearch-2024.7.29.tar.gz from build tracker '/tmp/pip-build-tracker-hrt_1v02' 2024-07-29T19:20:11,945 Created temporary directory: /tmp/pip-unpack-0bxncgd0 2024-07-29T19:20:11,946 Created temporary directory: /tmp/pip-unpack-ig5v3wb4 2024-07-29T19:20:11,947 Building wheels for collected packages: pyhmmsearch 2024-07-29T19:20:11,952 Created temporary directory: /tmp/pip-wheel-5mexjd46 2024-07-29T19:20:11,953 Building wheel for pyhmmsearch (setup.py): started 2024-07-29T19:20:11,954 Destination directory: /tmp/pip-wheel-5mexjd46 2024-07-29T19:20:11,955 Running command python setup.py bdist_wheel 2024-07-29T19:20:13,023 running bdist_wheel 2024-07-29T19:20:13,166 running build 2024-07-29T19:20:13,167 running build_py 2024-07-29T19:20:13,196 creating build 2024-07-29T19:20:13,197 creating build/lib 2024-07-29T19:20:13,198 creating build/lib/pyhmmsearch 2024-07-29T19:20:13,199 copying pyhmmsearch/pyhmmsearch.py -> build/lib/pyhmmsearch 2024-07-29T19:20:13,201 copying pyhmmsearch/reformat_pyhmmsearch.py -> build/lib/pyhmmsearch 2024-07-29T19:20:13,203 copying pyhmmsearch/serialize_hmm_models.py -> build/lib/pyhmmsearch 2024-07-29T19:20:13,205 copying pyhmmsearch/__init__.py -> build/lib/pyhmmsearch 2024-07-29T19:20:13,208 running build_scripts 2024-07-29T19:20:13,209 creating build/scripts-3.11 2024-07-29T19:20:13,209 copying and adjusting pyhmmsearch/pyhmmsearch.py -> build/scripts-3.11 2024-07-29T19:20:13,212 copying and adjusting pyhmmsearch/reformat_pyhmmsearch.py -> build/scripts-3.11 2024-07-29T19:20:13,213 copying and adjusting pyhmmsearch/serialize_hmm_models.py -> build/scripts-3.11 2024-07-29T19:20:13,215 changing mode of build/scripts-3.11/pyhmmsearch.py from 644 to 755 2024-07-29T19:20:13,216 changing mode of build/scripts-3.11/reformat_pyhmmsearch.py from 644 to 755 2024-07-29T19:20:13,217 changing mode of build/scripts-3.11/serialize_hmm_models.py from 644 to 755 2024-07-29T19:20:13,246 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-07-29T19:20:13,247 !! 2024-07-29T19:20:13,248 ******************************************************************************** 2024-07-29T19:20:13,249 Please avoid running ``setup.py`` directly. 2024-07-29T19:20:13,249 Instead, use pypa/build, pypa/installer or other 2024-07-29T19:20:13,250 standards-based tools. 2024-07-29T19:20:13,251 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-07-29T19:20:13,252 ******************************************************************************** 2024-07-29T19:20:13,253 !! 2024-07-29T19:20:13,253 self.initialize_options() 2024-07-29T19:20:13,275 installing to build/bdist.linux-armv7l/wheel 2024-07-29T19:20:13,275 running install 2024-07-29T19:20:13,300 running install_lib 2024-07-29T19:20:13,326 creating build/bdist.linux-armv7l 2024-07-29T19:20:13,327 creating build/bdist.linux-armv7l/wheel 2024-07-29T19:20:13,328 creating build/bdist.linux-armv7l/wheel/pyhmmsearch 2024-07-29T19:20:13,329 copying build/lib/pyhmmsearch/pyhmmsearch.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch 2024-07-29T19:20:13,332 copying build/lib/pyhmmsearch/reformat_pyhmmsearch.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch 2024-07-29T19:20:13,333 copying build/lib/pyhmmsearch/serialize_hmm_models.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch 2024-07-29T19:20:13,335 copying build/lib/pyhmmsearch/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch 2024-07-29T19:20:13,337 running install_egg_info 2024-07-29T19:20:13,370 running egg_info 2024-07-29T19:20:13,397 writing pyhmmsearch.egg-info/PKG-INFO 2024-07-29T19:20:13,399 writing dependency_links to pyhmmsearch.egg-info/dependency_links.txt 2024-07-29T19:20:13,401 writing requirements to pyhmmsearch.egg-info/requires.txt 2024-07-29T19:20:13,402 writing top-level names to pyhmmsearch.egg-info/top_level.txt 2024-07-29T19:20:13,431 reading manifest file 'pyhmmsearch.egg-info/SOURCES.txt' 2024-07-29T19:20:13,433 adding license file 'LICENSE' 2024-07-29T19:20:13,435 writing manifest file 'pyhmmsearch.egg-info/SOURCES.txt' 2024-07-29T19:20:13,437 Copying pyhmmsearch.egg-info to build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29-py3.11.egg-info 2024-07-29T19:20:13,446 running install_scripts 2024-07-29T19:20:13,447 creating build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data 2024-07-29T19:20:13,447 creating build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts 2024-07-29T19:20:13,448 copying build/scripts-3.11/pyhmmsearch.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts 2024-07-29T19:20:13,451 copying build/scripts-3.11/reformat_pyhmmsearch.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts 2024-07-29T19:20:13,453 copying build/scripts-3.11/serialize_hmm_models.py -> build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts 2024-07-29T19:20:13,455 changing mode of build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts/pyhmmsearch.py to 755 2024-07-29T19:20:13,456 changing mode of build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts/reformat_pyhmmsearch.py to 755 2024-07-29T19:20:13,456 changing mode of build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.data/scripts/serialize_hmm_models.py to 755 2024-07-29T19:20:13,471 creating build/bdist.linux-armv7l/wheel/pyhmmsearch-2024.7.29.dist-info/WHEEL 2024-07-29T19:20:13,474 creating '/tmp/pip-wheel-5mexjd46/pyhmmsearch-2024.7.29-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-07-29T19:20:13,476 adding 'pyhmmsearch/__init__.py' 2024-07-29T19:20:13,478 adding 'pyhmmsearch/pyhmmsearch.py' 2024-07-29T19:20:13,479 adding 'pyhmmsearch/reformat_pyhmmsearch.py' 2024-07-29T19:20:13,481 adding 'pyhmmsearch/serialize_hmm_models.py' 2024-07-29T19:20:13,484 adding 'pyhmmsearch-2024.7.29.data/scripts/pyhmmsearch.py' 2024-07-29T19:20:13,485 adding 'pyhmmsearch-2024.7.29.data/scripts/reformat_pyhmmsearch.py' 2024-07-29T19:20:13,486 adding 'pyhmmsearch-2024.7.29.data/scripts/serialize_hmm_models.py' 2024-07-29T19:20:13,489 adding 'pyhmmsearch-2024.7.29.dist-info/LICENSE' 2024-07-29T19:20:13,490 adding 'pyhmmsearch-2024.7.29.dist-info/METADATA' 2024-07-29T19:20:13,491 adding 'pyhmmsearch-2024.7.29.dist-info/WHEEL' 2024-07-29T19:20:13,492 adding 'pyhmmsearch-2024.7.29.dist-info/top_level.txt' 2024-07-29T19:20:13,493 adding 'pyhmmsearch-2024.7.29.dist-info/RECORD' 2024-07-29T19:20:13,494 removing build/bdist.linux-armv7l/wheel 2024-07-29T19:20:13,615 Building wheel for pyhmmsearch (setup.py): finished with status 'done' 2024-07-29T19:20:13,618 Created wheel for pyhmmsearch: filename=pyhmmsearch-2024.7.29-py3-none-any.whl size=14362 sha256=9d6e4f612bc54c2b8544ba0736d3ecd4077ad1903a240d3a3b21f1109023b5be 2024-07-29T19:20:13,619 Stored in directory: /tmp/pip-ephem-wheel-cache-0umoip1p/wheels/6a/1b/0f/dc793d71c8dd36124208e0aaa9c7c6d76700a682d37a0127a8 2024-07-29T19:20:13,628 Successfully built pyhmmsearch 2024-07-29T19:20:13,632 Removed build tracker: '/tmp/pip-build-tracker-hrt_1v02'