2024-08-01T16:08:42,382 Created temporary directory: /tmp/pip-build-tracker-zacn7j2z
2024-08-01T16:08:42,383 Initialized build tracking at /tmp/pip-build-tracker-zacn7j2z
2024-08-01T16:08:42,384 Created build tracker: /tmp/pip-build-tracker-zacn7j2z
2024-08-01T16:08:42,384 Entered build tracker: /tmp/pip-build-tracker-zacn7j2z
2024-08-01T16:08:42,385 Created temporary directory: /tmp/pip-wheel-hqxsf2zm
2024-08-01T16:08:42,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-uj37ug9_
2024-08-01T16:08:42,417 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-08-01T16:08:42,420 2 location(s) to search for versions of phylodeep-data-bdss:
2024-08-01T16:08:42,420 * https://pypi.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,420 * https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,421 Fetching project page and analyzing links: https://pypi.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,422 Getting page https://pypi.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,423 Found index url https://pypi.org/simple/
2024-08-01T16:08:42,443 Fetched page https://pypi.org/simple/phylodeep-data-bdss/ as application/vnd.pypi.simple.v1+json
2024-08-01T16:08:42,445   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/23/29/c54c11e9b0bb9250c0306a1c976bf2d159ff75d11a1ba17e5565799a9fe7/phylodeep_data_bdss-0.1-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-01T16:08:42,446   Found link https://files.pythonhosted.org/packages/c2/a9/e8731f6a28d40f3bb7c22ab9905896741b848ca8ebceb0451e545f2350f5/phylodeep_data_bdss-0.1.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.1
2024-08-01T16:08:42,447   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/ac/24/088371e8ea70ebc5fae95076c82fd1234d2cd62be66f856bb132d1b89d58/phylodeep_data_bdss-0.2-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-01T16:08:42,448   Found link https://files.pythonhosted.org/packages/9a/8e/9b4c1ba94b7cc3ced970e743cc64d392b883425ca6ec307ae3afaeed7b98/phylodeep_data_bdss-0.2.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.2
2024-08-01T16:08:42,448   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/d4/02/f3e1d2b6c7c2cd999b2c1dc64f3160cdc7a1cf55fc6f68c3f6cd11d87817/phylodeep_data_bdss-0.3-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-01T16:08:42,449   Found link https://files.pythonhosted.org/packages/7b/9d/b3fc6215bed26bd18ea9df3aa0b1f1d39b71901f7a1b281bf1e872b42bb1/phylodeep_data_bdss-0.3.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.3
2024-08-01T16:08:42,450 Fetching project page and analyzing links: https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,451 Getting page https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,453 Found index url https://www.piwheels.org/simple/
2024-08-01T16:08:42,489 Fetched page https://www.piwheels.org/simple/phylodeep-data-bdss/ as text/html
2024-08-01T16:08:42,490   Skipping link: No binaries permitted for phylodeep-data-bdss: https://www.piwheels.org/simple/phylodeep-data-bdss/phylodeep_data_bdss-0.1-py3-none-any.whl#sha256=0dce9bea5c608366fde81df751e821ebe0553d60ceac77442902eef26ec05c65 (from https://www.piwheels.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-01T16:08:42,491 Skipping link: not a file: https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,492 Skipping link: not a file: https://pypi.org/simple/phylodeep-data-bdss/
2024-08-01T16:08:42,511 Given no hashes to check 1 links for project 'phylodeep-data-bdss': discarding no candidates
2024-08-01T16:08:42,529 Collecting phylodeep-data-bdss==0.2
2024-08-01T16:08:42,532   Created temporary directory: /tmp/pip-unpack-q3xfjc_0
2024-08-01T16:08:42,831   Downloading phylodeep_data_bdss-0.2.tar.gz (76.6 MB)
2024-08-01T16:08:55,601   Added phylodeep-data-bdss==0.2 from https://files.pythonhosted.org/packages/9a/8e/9b4c1ba94b7cc3ced970e743cc64d392b883425ca6ec307ae3afaeed7b98/phylodeep_data_bdss-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-zacn7j2z'
2024-08-01T16:08:55,602   Running setup.py (path:/tmp/pip-wheel-hqxsf2zm/phylodeep-data-bdss_76910c58694e4610bb3e9612c910cebd/setup.py) egg_info for package phylodeep-data-bdss
2024-08-01T16:08:55,603   Created temporary directory: /tmp/pip-pip-egg-info-ihncftun
2024-08-01T16:08:55,604   Preparing metadata (setup.py): started
2024-08-01T16:08:55,605   Running command python setup.py egg_info
2024-08-01T16:08:56,712   running egg_info
2024-08-01T16:08:56,713   creating /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info
2024-08-01T16:08:56,741   writing /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/PKG-INFO
2024-08-01T16:08:56,745   writing dependency_links to /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/dependency_links.txt
2024-08-01T16:08:56,746   writing entry points to /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/entry_points.txt
2024-08-01T16:08:56,747   writing requirements to /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/requires.txt
2024-08-01T16:08:56,749   writing top-level names to /tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/top_level.txt
2024-08-01T16:08:56,750   writing manifest file '/tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-01T16:08:56,839   reading manifest file '/tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-01T16:08:56,841   adding license file 'LICENSE'
2024-08-01T16:08:56,843   writing manifest file '/tmp/pip-pip-egg-info-ihncftun/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-01T16:08:56,955   Preparing metadata (setup.py): finished with status 'done'
2024-08-01T16:08:56,958   Source in /tmp/pip-wheel-hqxsf2zm/phylodeep-data-bdss_76910c58694e4610bb3e9612c910cebd has version 0.2, which satisfies requirement phylodeep-data-bdss==0.2 from https://files.pythonhosted.org/packages/9a/8e/9b4c1ba94b7cc3ced970e743cc64d392b883425ca6ec307ae3afaeed7b98/phylodeep_data_bdss-0.2.tar.gz
2024-08-01T16:08:56,960   Removed phylodeep-data-bdss==0.2 from https://files.pythonhosted.org/packages/9a/8e/9b4c1ba94b7cc3ced970e743cc64d392b883425ca6ec307ae3afaeed7b98/phylodeep_data_bdss-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-zacn7j2z'
2024-08-01T16:08:56,965 Created temporary directory: /tmp/pip-unpack-8b7z3o3u
2024-08-01T16:08:56,966 Created temporary directory: /tmp/pip-unpack-r24bu4ed
2024-08-01T16:08:56,967 Building wheels for collected packages: phylodeep-data-bdss
2024-08-01T16:08:56,971   Created temporary directory: /tmp/pip-wheel-3vejvn81
2024-08-01T16:08:56,972   Building wheel for phylodeep-data-bdss (setup.py): started
2024-08-01T16:08:56,973   Destination directory: /tmp/pip-wheel-3vejvn81
2024-08-01T16:08:56,973   Running command python setup.py bdist_wheel
2024-08-01T16:08:58,033   running bdist_wheel
2024-08-01T16:08:58,177   running build
2024-08-01T16:08:58,178   running build_py
2024-08-01T16:08:58,207   creating build
2024-08-01T16:08:58,208   creating build/lib
2024-08-01T16:08:58,209   creating build/lib/phylodeep_data_bdss
2024-08-01T16:08:58,210   copying phylodeep_data_bdss/__init__.py -> build/lib/phylodeep_data_bdss
2024-08-01T16:08:58,212   running egg_info
2024-08-01T16:08:58,238   writing phylodeep_data_bdss.egg-info/PKG-INFO
2024-08-01T16:08:58,241   writing dependency_links to phylodeep_data_bdss.egg-info/dependency_links.txt
2024-08-01T16:08:58,243   writing entry points to phylodeep_data_bdss.egg-info/entry_points.txt
2024-08-01T16:08:58,244   writing requirements to phylodeep_data_bdss.egg-info/requires.txt
2024-08-01T16:08:58,245   writing top-level names to phylodeep_data_bdss.egg-info/top_level.txt
2024-08-01T16:08:58,276   reading manifest file 'phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-01T16:08:58,278   adding license file 'LICENSE'
2024-08-01T16:08:58,280   writing manifest file 'phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-01T16:08:58,282   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'phylodeep_data_bdss.large' is absent from the `packages` configuration.
2024-08-01T16:08:58,283   !!

2024-08-01T16:08:58,284           ********************************************************************************
2024-08-01T16:08:58,284           ############################
2024-08-01T16:08:58,285           # Package would be ignored #
2024-08-01T16:08:58,285           ############################
2024-08-01T16:08:58,286           Python recognizes 'phylodeep_data_bdss.large' as an importable package[^1],
2024-08-01T16:08:58,286           but it is absent from setuptools' `packages` configuration.

2024-08-01T16:08:58,287           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-01T16:08:58,287           package, please make sure that 'phylodeep_data_bdss.large' is explicitly added
2024-08-01T16:08:58,288           to the `packages` configuration field.

2024-08-01T16:08:58,289           Alternatively, you can also rely on setuptools' discovery methods
2024-08-01T16:08:58,289           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-01T16:08:58,290           instead of `find_packages(...)`/`find:`).

2024-08-01T16:08:58,290           You can read more about "package discovery" on setuptools documentation page:

2024-08-01T16:08:58,291           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-01T16:08:58,292           If you don't want 'phylodeep_data_bdss.large' to be distributed and are
2024-08-01T16:08:58,293           already explicitly excluding 'phylodeep_data_bdss.large' via
2024-08-01T16:08:58,294           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-01T16:08:58,294           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-01T16:08:58,295           combination with a more fine grained `package-data` configuration.

2024-08-01T16:08:58,296           You can read more about "package data files" on setuptools documentation page:

2024-08-01T16:08:58,298           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-01T16:08:58,300           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-01T16:08:58,300                 even if it does not contain any `.py` files.
2024-08-01T16:08:58,301                 On the other hand, currently there is no concept of package data
2024-08-01T16:08:58,302                 directory, all directories are treated like packages.
2024-08-01T16:08:58,302           ********************************************************************************

2024-08-01T16:08:58,303   !!
2024-08-01T16:08:58,304     check.warn(importable)
2024-08-01T16:08:58,305   copying phylodeep_data_bdss/../README.md -> build/lib/phylodeep_data_bdss/..
2024-08-01T16:08:58,305   creating build/lib/phylodeep_data_bdss/large
2024-08-01T16:08:58,306   copying phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-01T16:08:58,547   copying phylodeep_data_bdss/large/FNN_SUMSTATS.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-01T16:08:59,279   copying phylodeep_data_bdss/large/target.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-01T16:09:00,003   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-08-01T16:09:00,004   !!

2024-08-01T16:09:00,005           ********************************************************************************
2024-08-01T16:09:00,006           Please avoid running ``setup.py`` directly.
2024-08-01T16:09:00,007           Instead, use pypa/build, pypa/installer or other
2024-08-01T16:09:00,007           standards-based tools.

2024-08-01T16:09:00,009           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-08-01T16:09:00,009           ********************************************************************************

2024-08-01T16:09:00,011   !!
2024-08-01T16:09:00,011     self.initialize_options()
2024-08-01T16:09:00,032   installing to build/bdist.linux-armv7l/wheel
2024-08-01T16:09:00,033   running install
2024-08-01T16:09:00,057   running install_lib
2024-08-01T16:09:00,084   creating build/bdist.linux-armv7l
2024-08-01T16:09:00,085   creating build/bdist.linux-armv7l/wheel
2024-08-01T16:09:00,086   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss
2024-08-01T16:09:00,088   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-01T16:09:00,088   copying build/lib/phylodeep_data_bdss/large/FNN_SUMSTATS.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-01T16:09:00,329   copying build/lib/phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-01T16:09:00,577   copying build/lib/phylodeep_data_bdss/large/target.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-01T16:09:01,915   copying build/lib/phylodeep_data_bdss/__init__.py -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss
2024-08-01T16:09:01,917   copying build/lib/README.md -> build/bdist.linux-armv7l/wheel
2024-08-01T16:09:01,919   running install_egg_info
2024-08-01T16:09:01,953   Copying phylodeep_data_bdss.egg-info to build/bdist.linux-armv7l/wheel/phylodeep_data_bdss-0.2-py3.11.egg-info
2024-08-01T16:09:01,967   running install_scripts
2024-08-01T16:09:01,986   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss-0.2.dist-info/WHEEL
2024-08-01T16:09:01,990   creating '/tmp/pip-wheel-3vejvn81/phylodeep_data_bdss-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-08-01T16:09:01,991   adding 'README.md'
2024-08-01T16:09:01,994   adding 'phylodeep_data_bdss/__init__.py'
2024-08-01T16:09:03,838   adding 'phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz'
2024-08-01T16:09:05,778   adding 'phylodeep_data_bdss/large/FNN_SUMSTATS.csv.xz'
2024-08-01T16:09:10,649   adding 'phylodeep_data_bdss/large/target.csv.xz'
2024-08-01T16:09:10,960   adding 'phylodeep_data_bdss-0.2.dist-info/LICENSE'
2024-08-01T16:09:10,961   adding 'phylodeep_data_bdss-0.2.dist-info/METADATA'
2024-08-01T16:09:10,962   adding 'phylodeep_data_bdss-0.2.dist-info/WHEEL'
2024-08-01T16:09:10,963   adding 'phylodeep_data_bdss-0.2.dist-info/entry_points.txt'
2024-08-01T16:09:10,965   adding 'phylodeep_data_bdss-0.2.dist-info/top_level.txt'
2024-08-01T16:09:10,965   adding 'phylodeep_data_bdss-0.2.dist-info/RECORD'
2024-08-01T16:09:11,364   removing build/bdist.linux-armv7l/wheel
2024-08-01T16:09:11,511   Building wheel for phylodeep-data-bdss (setup.py): finished with status 'done'
2024-08-01T16:09:13,163   Created wheel for phylodeep-data-bdss: filename=phylodeep_data_bdss-0.2-py3-none-any.whl size=76561411 sha256=b1e59e6476b14d57a19c9f6d7251aaa89f45963db1a4c08bda08f1dc7e5fb6d7
2024-08-01T16:09:13,164   Stored in directory: /tmp/pip-ephem-wheel-cache-uj37ug9_/wheels/81/e0/88/20195f9f57715b9f8d59ba681c2d54dd7c90a9d660a4464565
2024-08-01T16:09:13,200 Successfully built phylodeep-data-bdss
2024-08-01T16:09:15,121 Removed build tracker: '/tmp/pip-build-tracker-zacn7j2z'