2024-08-06T17:39:54,810 Created temporary directory: /tmp/pip-build-tracker-3xzk5z05
2024-08-06T17:39:54,811 Initialized build tracking at /tmp/pip-build-tracker-3xzk5z05
2024-08-06T17:39:54,811 Created build tracker: /tmp/pip-build-tracker-3xzk5z05
2024-08-06T17:39:54,812 Entered build tracker: /tmp/pip-build-tracker-3xzk5z05
2024-08-06T17:39:54,813 Created temporary directory: /tmp/pip-wheel-8wrd55rc
2024-08-06T17:39:54,817 Created temporary directory: /tmp/pip-ephem-wheel-cache-rqkyq47t
2024-08-06T17:39:54,844 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-08-06T17:39:54,847 2 location(s) to search for versions of phylodeep-data-bdss:
2024-08-06T17:39:54,847 * https://pypi.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,847 * https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,848 Fetching project page and analyzing links: https://pypi.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,849 Getting page https://pypi.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,850 Found index url https://pypi.org/simple/
2024-08-06T17:39:54,950 Fetched page https://pypi.org/simple/phylodeep-data-bdss/ as application/vnd.pypi.simple.v1+json
2024-08-06T17:39:54,952   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/23/29/c54c11e9b0bb9250c0306a1c976bf2d159ff75d11a1ba17e5565799a9fe7/phylodeep_data_bdss-0.1-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:54,954   Found link https://files.pythonhosted.org/packages/c2/a9/e8731f6a28d40f3bb7c22ab9905896741b848ca8ebceb0451e545f2350f5/phylodeep_data_bdss-0.1.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.1
2024-08-06T17:39:54,955   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/ac/24/088371e8ea70ebc5fae95076c82fd1234d2cd62be66f856bb132d1b89d58/phylodeep_data_bdss-0.2-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:54,955   Found link https://files.pythonhosted.org/packages/9a/8e/9b4c1ba94b7cc3ced970e743cc64d392b883425ca6ec307ae3afaeed7b98/phylodeep_data_bdss-0.2.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.2
2024-08-06T17:39:54,956   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/d4/02/f3e1d2b6c7c2cd999b2c1dc64f3160cdc7a1cf55fc6f68c3f6cd11d87817/phylodeep_data_bdss-0.3-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:54,957   Found link https://files.pythonhosted.org/packages/7b/9d/b3fc6215bed26bd18ea9df3aa0b1f1d39b71901f7a1b281bf1e872b42bb1/phylodeep_data_bdss-0.3.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.3
2024-08-06T17:39:54,958   Skipping link: No binaries permitted for phylodeep-data-bdss: https://files.pythonhosted.org/packages/55/18/e6541bd65257c3c7577b2617399a11c2ce9856f0a0e7fd2a02c2b829388a/phylodeep_data_bdss-0.4-py3-none-any.whl (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:54,959   Found link https://files.pythonhosted.org/packages/3f/53/121bee4699d464496664249e30fdc3f643e72ad7211660fb5c170fde9d71/phylodeep_data_bdss-0.4.tar.gz (from https://pypi.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8), version: 0.4
2024-08-06T17:39:54,959 Fetching project page and analyzing links: https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,960 Getting page https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:54,961 Found index url https://www.piwheels.org/simple/
2024-08-06T17:39:55,010 Fetched page https://www.piwheels.org/simple/phylodeep-data-bdss/ as text/html
2024-08-06T17:39:55,012   Skipping link: No binaries permitted for phylodeep-data-bdss: https://www.piwheels.org/simple/phylodeep-data-bdss/phylodeep_data_bdss-0.3-py3-none-any.whl#sha256=c9bd08a544ca15073e6f2a3eec351c6260a981b8a65c9c4465f8db38695c2f76 (from https://www.piwheels.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:55,013   Skipping link: No binaries permitted for phylodeep-data-bdss: https://www.piwheels.org/simple/phylodeep-data-bdss/phylodeep_data_bdss-0.2-py3-none-any.whl#sha256=b1e59e6476b14d57a19c9f6d7251aaa89f45963db1a4c08bda08f1dc7e5fb6d7 (from https://www.piwheels.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:55,014   Skipping link: No binaries permitted for phylodeep-data-bdss: https://www.piwheels.org/simple/phylodeep-data-bdss/phylodeep_data_bdss-0.1-py3-none-any.whl#sha256=0dce9bea5c608366fde81df751e821ebe0553d60ceac77442902eef26ec05c65 (from https://www.piwheels.org/simple/phylodeep-data-bdss/) (requires-python:>=3.8)
2024-08-06T17:39:55,014 Skipping link: not a file: https://www.piwheels.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:55,015 Skipping link: not a file: https://pypi.org/simple/phylodeep-data-bdss/
2024-08-06T17:39:55,035 Given no hashes to check 1 links for project 'phylodeep-data-bdss': discarding no candidates
2024-08-06T17:39:55,055 Collecting phylodeep-data-bdss==0.4
2024-08-06T17:39:55,057   Created temporary directory: /tmp/pip-unpack-9149x4yn
2024-08-06T17:39:55,075   Downloading phylodeep_data_bdss-0.4.tar.gz (76.6 MB)
2024-08-06T17:40:00,986   Added phylodeep-data-bdss==0.4 from https://files.pythonhosted.org/packages/3f/53/121bee4699d464496664249e30fdc3f643e72ad7211660fb5c170fde9d71/phylodeep_data_bdss-0.4.tar.gz to build tracker '/tmp/pip-build-tracker-3xzk5z05'
2024-08-06T17:40:00,988   Running setup.py (path:/tmp/pip-wheel-8wrd55rc/phylodeep-data-bdss_457027e94b2c435da5196e526d998e3c/setup.py) egg_info for package phylodeep-data-bdss
2024-08-06T17:40:00,989   Created temporary directory: /tmp/pip-pip-egg-info-szl9ww2b
2024-08-06T17:40:00,990   Preparing metadata (setup.py): started
2024-08-06T17:40:00,991   Running command python setup.py egg_info
2024-08-06T17:40:02,092   running egg_info
2024-08-06T17:40:02,093   creating /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info
2024-08-06T17:40:02,121   writing /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/PKG-INFO
2024-08-06T17:40:02,124   writing dependency_links to /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/dependency_links.txt
2024-08-06T17:40:02,125   writing entry points to /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/entry_points.txt
2024-08-06T17:40:02,127   writing requirements to /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/requires.txt
2024-08-06T17:40:02,128   writing top-level names to /tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/top_level.txt
2024-08-06T17:40:02,130   writing manifest file '/tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-06T17:40:02,217   reading manifest file '/tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-06T17:40:02,219   adding license file 'LICENSE'
2024-08-06T17:40:02,220   writing manifest file '/tmp/pip-pip-egg-info-szl9ww2b/phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-06T17:40:02,332   Preparing metadata (setup.py): finished with status 'done'
2024-08-06T17:40:02,336   Source in /tmp/pip-wheel-8wrd55rc/phylodeep-data-bdss_457027e94b2c435da5196e526d998e3c has version 0.4, which satisfies requirement phylodeep-data-bdss==0.4 from https://files.pythonhosted.org/packages/3f/53/121bee4699d464496664249e30fdc3f643e72ad7211660fb5c170fde9d71/phylodeep_data_bdss-0.4.tar.gz
2024-08-06T17:40:02,337   Removed phylodeep-data-bdss==0.4 from https://files.pythonhosted.org/packages/3f/53/121bee4699d464496664249e30fdc3f643e72ad7211660fb5c170fde9d71/phylodeep_data_bdss-0.4.tar.gz from build tracker '/tmp/pip-build-tracker-3xzk5z05'
2024-08-06T17:40:02,342 Created temporary directory: /tmp/pip-unpack-ljueax4q
2024-08-06T17:40:02,344 Created temporary directory: /tmp/pip-unpack-zre_7ubn
2024-08-06T17:40:02,344 Building wheels for collected packages: phylodeep-data-bdss
2024-08-06T17:40:02,348   Created temporary directory: /tmp/pip-wheel-51j1cgfn
2024-08-06T17:40:02,349   Building wheel for phylodeep-data-bdss (setup.py): started
2024-08-06T17:40:02,351   Destination directory: /tmp/pip-wheel-51j1cgfn
2024-08-06T17:40:02,351   Running command python setup.py bdist_wheel
2024-08-06T17:40:03,416   running bdist_wheel
2024-08-06T17:40:03,560   running build
2024-08-06T17:40:03,561   running build_py
2024-08-06T17:40:03,591   creating build
2024-08-06T17:40:03,591   creating build/lib
2024-08-06T17:40:03,592   creating build/lib/phylodeep_data_bdss
2024-08-06T17:40:03,593   copying phylodeep_data_bdss/__init__.py -> build/lib/phylodeep_data_bdss
2024-08-06T17:40:03,595   running egg_info
2024-08-06T17:40:03,622   writing phylodeep_data_bdss.egg-info/PKG-INFO
2024-08-06T17:40:03,625   writing dependency_links to phylodeep_data_bdss.egg-info/dependency_links.txt
2024-08-06T17:40:03,626   writing entry points to phylodeep_data_bdss.egg-info/entry_points.txt
2024-08-06T17:40:03,627   writing requirements to phylodeep_data_bdss.egg-info/requires.txt
2024-08-06T17:40:03,628   writing top-level names to phylodeep_data_bdss.egg-info/top_level.txt
2024-08-06T17:40:03,659   reading manifest file 'phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-06T17:40:03,661   adding license file 'LICENSE'
2024-08-06T17:40:03,663   writing manifest file 'phylodeep_data_bdss.egg-info/SOURCES.txt'
2024-08-06T17:40:03,665   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'phylodeep_data_bdss.large' is absent from the `packages` configuration.
2024-08-06T17:40:03,666   !!

2024-08-06T17:40:03,667           ********************************************************************************
2024-08-06T17:40:03,667           ############################
2024-08-06T17:40:03,668           # Package would be ignored #
2024-08-06T17:40:03,668           ############################
2024-08-06T17:40:03,669           Python recognizes 'phylodeep_data_bdss.large' as an importable package[^1],
2024-08-06T17:40:03,669           but it is absent from setuptools' `packages` configuration.

2024-08-06T17:40:03,670           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-06T17:40:03,671           package, please make sure that 'phylodeep_data_bdss.large' is explicitly added
2024-08-06T17:40:03,671           to the `packages` configuration field.

2024-08-06T17:40:03,672           Alternatively, you can also rely on setuptools' discovery methods
2024-08-06T17:40:03,673           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-06T17:40:03,673           instead of `find_packages(...)`/`find:`).

2024-08-06T17:40:03,674           You can read more about "package discovery" on setuptools documentation page:

2024-08-06T17:40:03,675           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-06T17:40:03,677           If you don't want 'phylodeep_data_bdss.large' to be distributed and are
2024-08-06T17:40:03,677           already explicitly excluding 'phylodeep_data_bdss.large' via
2024-08-06T17:40:03,678           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-06T17:40:03,678           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-06T17:40:03,679           combination with a more fine grained `package-data` configuration.

2024-08-06T17:40:03,680           You can read more about "package data files" on setuptools documentation page:

2024-08-06T17:40:03,681           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-06T17:40:03,682           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-06T17:40:03,683                 even if it does not contain any `.py` files.
2024-08-06T17:40:03,683                 On the other hand, currently there is no concept of package data
2024-08-06T17:40:03,684                 directory, all directories are treated like packages.
2024-08-06T17:40:03,685           ********************************************************************************

2024-08-06T17:40:03,686   !!
2024-08-06T17:40:03,687     check.warn(importable)
2024-08-06T17:40:03,687   copying phylodeep_data_bdss/../README.md -> build/lib/phylodeep_data_bdss/..
2024-08-06T17:40:03,687   creating build/lib/phylodeep_data_bdss/large
2024-08-06T17:40:03,688   copying phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-06T17:40:03,902   copying phylodeep_data_bdss/large/FFNN_SUMSTATS.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-06T17:40:04,150   copying phylodeep_data_bdss/large/target.csv.xz -> build/lib/phylodeep_data_bdss/large
2024-08-06T17:40:06,821   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-08-06T17:40:06,821   !!

2024-08-06T17:40:06,822           ********************************************************************************
2024-08-06T17:40:06,823           Please avoid running ``setup.py`` directly.
2024-08-06T17:40:06,823           Instead, use pypa/build, pypa/installer or other
2024-08-06T17:40:06,824           standards-based tools.

2024-08-06T17:40:06,825           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-08-06T17:40:06,825           ********************************************************************************

2024-08-06T17:40:06,826   !!
2024-08-06T17:40:06,826     self.initialize_options()
2024-08-06T17:40:06,853   installing to build/bdist.linux-armv7l/wheel
2024-08-06T17:40:06,853   running install
2024-08-06T17:40:06,879   running install_lib
2024-08-06T17:40:06,907   creating build/bdist.linux-armv7l
2024-08-06T17:40:06,907   creating build/bdist.linux-armv7l/wheel
2024-08-06T17:40:06,909   copying build/lib/README.md -> build/bdist.linux-armv7l/wheel
2024-08-06T17:40:06,911   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss
2024-08-06T17:40:06,913   copying build/lib/phylodeep_data_bdss/__init__.py -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss
2024-08-06T17:40:06,916   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-06T17:40:06,917   copying build/lib/phylodeep_data_bdss/large/FFNN_SUMSTATS.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-06T17:40:07,204   copying build/lib/phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-06T17:40:07,952   copying build/lib/phylodeep_data_bdss/large/target.csv.xz -> build/bdist.linux-armv7l/wheel/phylodeep_data_bdss/large
2024-08-06T17:40:09,273   running install_egg_info
2024-08-06T17:40:09,316   Copying phylodeep_data_bdss.egg-info to build/bdist.linux-armv7l/wheel/phylodeep_data_bdss-0.4-py3.11.egg-info
2024-08-06T17:40:09,348   running install_scripts
2024-08-06T17:40:09,371   creating build/bdist.linux-armv7l/wheel/phylodeep_data_bdss-0.4.dist-info/WHEEL
2024-08-06T17:40:09,377   creating '/tmp/pip-wheel-51j1cgfn/phylodeep_data_bdss-0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-08-06T17:40:09,380   adding 'README.md'
2024-08-06T17:40:09,382   adding 'phylodeep_data_bdss/__init__.py'
2024-08-06T17:40:11,256   adding 'phylodeep_data_bdss/large/CNN_FULL_TREE.csv.xz'
2024-08-06T17:40:13,200   adding 'phylodeep_data_bdss/large/FFNN_SUMSTATS.csv.xz'
2024-08-06T17:40:18,225   adding 'phylodeep_data_bdss/large/target.csv.xz'
2024-08-06T17:40:18,496   adding 'phylodeep_data_bdss-0.4.dist-info/LICENSE'
2024-08-06T17:40:18,497   adding 'phylodeep_data_bdss-0.4.dist-info/METADATA'
2024-08-06T17:40:18,498   adding 'phylodeep_data_bdss-0.4.dist-info/WHEEL'
2024-08-06T17:40:18,499   adding 'phylodeep_data_bdss-0.4.dist-info/entry_points.txt'
2024-08-06T17:40:18,500   adding 'phylodeep_data_bdss-0.4.dist-info/top_level.txt'
2024-08-06T17:40:18,501   adding 'phylodeep_data_bdss-0.4.dist-info/RECORD'
2024-08-06T17:40:18,918   removing build/bdist.linux-armv7l/wheel
2024-08-06T17:40:19,065   Building wheel for phylodeep-data-bdss (setup.py): finished with status 'done'
2024-08-06T17:40:20,704   Created wheel for phylodeep-data-bdss: filename=phylodeep_data_bdss-0.4-py3-none-any.whl size=76561416 sha256=4acfb9d99c386e208638197d13aa5fdd7c095aa2b9a2c430b0e45d82937b2479
2024-08-06T17:40:20,706   Stored in directory: /tmp/pip-ephem-wheel-cache-rqkyq47t/wheels/8a/6f/76/33c9bc1c48857211642e6446db10a614ab21056d8a738d705d
2024-08-06T17:40:20,741 Successfully built phylodeep-data-bdss
2024-08-06T17:40:22,523 Removed build tracker: '/tmp/pip-build-tracker-3xzk5z05'