2024-08-07T18:08:38,176 Created temporary directory: /tmp/pip-build-tracker-phxjgu5s
2024-08-07T18:08:38,178 Initialized build tracking at /tmp/pip-build-tracker-phxjgu5s
2024-08-07T18:08:38,178 Created build tracker: /tmp/pip-build-tracker-phxjgu5s
2024-08-07T18:08:38,178 Entered build tracker: /tmp/pip-build-tracker-phxjgu5s
2024-08-07T18:08:38,179 Created temporary directory: /tmp/pip-wheel-uwddf7g1
2024-08-07T18:08:38,183 Created temporary directory: /tmp/pip-ephem-wheel-cache-ksckei65
2024-08-07T18:08:38,212 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-08-07T18:08:38,214 2 location(s) to search for versions of sigprofilermatrixgenerator:
2024-08-07T18:08:38,214 * https://pypi.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,214 * https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,215 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,216 Getting page https://pypi.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,217 Found index url https://pypi.org/simple/
2024-08-07T18:08:38,313 Fetched page https://pypi.org/simple/sigprofilermatrixgenerator/ as application/vnd.pypi.simple.v1+json
2024-08-07T18:08:38,341   Found link https://files.pythonhosted.org/packages/c7/6a/28ddff4162d24d6994148c515057e5bfc71bb0183721f1ca875f6cc3c98a/SigProfilerMatrixGenerator-0.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.1
2024-08-07T18:08:38,342   Found link https://files.pythonhosted.org/packages/09/e0/a27c3a87eaa67985ed16425b07c6d0dbb9f2ed0bb370964a5eea8be9dc91/SigProfilerMatrixGenerator-0.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.2
2024-08-07T18:08:38,343   Found link https://files.pythonhosted.org/packages/bd/dd/b943503008f3dcda163b33e9402f52439b23c6b036cb328bcd37d6e7d010/SigProfilerMatrixGenerator-0.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.3
2024-08-07T18:08:38,343   Found link https://files.pythonhosted.org/packages/18/52/e8df4d5c50b73bee8f9ac77f5b30e1706176258c27c9ef81b20f467e3f60/SigProfilerMatrixGenerator-0.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.4
2024-08-07T18:08:38,344   Found link https://files.pythonhosted.org/packages/17/7b/f57ee232ba6fd2a0c0d49ce3777af69dea21e0ef979664825fbfd6e15d72/SigProfilerMatrixGenerator-0.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.5
2024-08-07T18:08:38,345   Found link https://files.pythonhosted.org/packages/7d/ea/fcb33c23e6653c3c50d6b438eb03cba08321e36d245b0642e4f4f29facd9/SigProfilerMatrixGenerator-0.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.6
2024-08-07T18:08:38,345   Found link https://files.pythonhosted.org/packages/f4/a3/770fcf7b2863289ff8d37137be8acc20995c64664d47dcd110dcaa8eedfb/SigProfilerMatrixGenerator-0.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.7
2024-08-07T18:08:38,346   Found link https://files.pythonhosted.org/packages/a9/0c/ae900daf1713185f851a882aafab8dbdf75cdd979fac87ac8b028ea3228e/SigProfilerMatrixGenerator-0.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.8
2024-08-07T18:08:38,347   Found link https://files.pythonhosted.org/packages/f9/58/915584f3317f44676353a359f2a91956fe9a1b4a7347487c0a6fe557b662/SigProfilerMatrixGenerator-0.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.9
2024-08-07T18:08:38,347   Found link https://files.pythonhosted.org/packages/e6/3a/9de0d7a6d81bcd6cf9386555aa3d0c8d9976927c066c9d05ce90fcc35f49/SigProfilerMatrixGenerator-0.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.10
2024-08-07T18:08:38,348   Found link https://files.pythonhosted.org/packages/a1/1f/2e6637742e6d3ef7aa0c36a946495fa8735826daadb50ae1939c6509bcb8/SigProfilerMatrixGenerator-0.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.11
2024-08-07T18:08:38,349   Found link https://files.pythonhosted.org/packages/9c/b9/5145722e31781332e84eba772a625e97101c77ac297e3f1c61384cee8f93/SigProfilerMatrixGenerator-0.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.12
2024-08-07T18:08:38,350   Found link https://files.pythonhosted.org/packages/56/03/e9e9b0dd8a36620b30677a94c2966d625c077727ab3c7c5ce657b75ddab1/SigProfilerMatrixGenerator-0.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.13
2024-08-07T18:08:38,350   Found link https://files.pythonhosted.org/packages/34/fc/a637b67b91bbc04cddaed487535962978a25e50face12c79da107a72e643/SigProfilerMatrixGenerator-0.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.14
2024-08-07T18:08:38,351   Found link https://files.pythonhosted.org/packages/be/d6/3678d80d2770647ee4ee99d672562fbe83e2ddebe4021ffdbe951410981e/SigProfilerMatrixGenerator-0.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.15
2024-08-07T18:08:38,352   Found link https://files.pythonhosted.org/packages/8f/46/07527d1d65dcad2f18876682b403ee40b8712a876894770519091819a94b/SigProfilerMatrixGenerator-0.1.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.16
2024-08-07T18:08:38,352   Found link https://files.pythonhosted.org/packages/0a/6f/fb786541b30b112da6f35604558b88f29adfd37b322e1bb477ead17ee013/SigProfilerMatrixGenerator-0.1.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.17
2024-08-07T18:08:38,353   Found link https://files.pythonhosted.org/packages/4c/be/499843893df4d02c0bdb5792039b9f550b358513fab7e252dc758fe461ab/SigProfilerMatrixGenerator-0.1.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.18
2024-08-07T18:08:38,353   Found link https://files.pythonhosted.org/packages/ce/31/b2b1bcda58e24b3a8c725477a0e1a6f41b0e9285741103f5deeb69bd0d04/SigProfilerMatrixGenerator-0.1.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.19
2024-08-07T18:08:38,354   Found link https://files.pythonhosted.org/packages/e1/21/fd9805121c089baa2223948e25ec2af1e8fdcde7544e433869740f1c0538/SigProfilerMatrixGenerator-0.1.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.20
2024-08-07T18:08:38,355   Found link https://files.pythonhosted.org/packages/9a/50/979cb4ca33ddd93a69ea767d17e17456f37f4466a7ba8f282ee55168c790/SigProfilerMatrixGenerator-0.1.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.21
2024-08-07T18:08:38,355   Found link https://files.pythonhosted.org/packages/e7/4b/f33f7d0898286be90c3db156863fafcde4e5e8f2ca4aef92e7c6f7424980/SigProfilerMatrixGenerator-0.1.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.22
2024-08-07T18:08:38,356   Found link https://files.pythonhosted.org/packages/c0/19/bfb595b2593be0eb945d196e1689714aade50c5ec43e96a351419579e18d/SigProfilerMatrixGenerator-0.1.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.23
2024-08-07T18:08:38,357   Found link https://files.pythonhosted.org/packages/e8/1c/7efb25df28e11476adad1e8cea8a2d8462d183175c7d4be29415fed872f3/SigProfilerMatrixGenerator-0.1.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.25
2024-08-07T18:08:38,357   Found link https://files.pythonhosted.org/packages/48/ca/6df1d33d4c0325190b09c0b2ff257cd46a97fe2b7136115a4ff5b1bcbb6d/SigProfilerMatrixGenerator-1.0.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.0
2024-08-07T18:08:38,358   Found link https://files.pythonhosted.org/packages/ae/1f/730357fb22484d14eb0cfe72e81962c2cfedf90cca75d94c6e1f88afb7b5/SigProfilerMatrixGenerator-1.0.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.1
2024-08-07T18:08:38,359   Found link https://files.pythonhosted.org/packages/8a/e3/1fc8743ee3078227377531039541b21553ab56fdc9914089aecaad18b218/SigProfilerMatrixGenerator-1.0.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.2
2024-08-07T18:08:38,359   Found link https://files.pythonhosted.org/packages/b3/89/6c10ccc120647b2b8a3ff3be7e12c8f0a7d3bbb648728a30e50a641fc5a2/SigProfilerMatrixGenerator-1.0.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.4
2024-08-07T18:08:38,360   Found link https://files.pythonhosted.org/packages/16/56/3e1fe788f9089baf807f1181061d68c19b0a3b4aa27cadedf86ffada0d6c/SigProfilerMatrixGenerator-1.0.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.5
2024-08-07T18:08:38,361   Found link https://files.pythonhosted.org/packages/31/23/bc67851b0fa5539bdb1528045700da2410ebbd4f771e493f7b5f17155365/SigProfilerMatrixGenerator-1.0.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.6
2024-08-07T18:08:38,362   Found link https://files.pythonhosted.org/packages/37/5e/7930da2d209c5944aae45447a8729c85958682f91ab8c5d2bca18ffcfab8/SigProfilerMatrixGenerator-1.0.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.7
2024-08-07T18:08:38,362   Found link https://files.pythonhosted.org/packages/12/c2/a1f85e85501667941a77de4751cd124173bb7dd6b37e5603d6818fbfa9ba/SigProfilerMatrixGenerator-1.0.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.8
2024-08-07T18:08:38,363   Found link https://files.pythonhosted.org/packages/68/8c/7923d4db4e08bbb467d66495f821f17ab2bed7e25b005b7fc153e2d08540/SigProfilerMatrixGenerator-1.0.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.9
2024-08-07T18:08:38,363   Found link https://files.pythonhosted.org/packages/57/3b/92569f53b63e6556dd46fcc514202e865878d7cb3b73f9481730d683f41c/SigProfilerMatrixGenerator-1.0.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.10
2024-08-07T18:08:38,364   Found link https://files.pythonhosted.org/packages/f7/4e/0d43742effcd43be3c8d865026b32017fa1407a6148bc0011dc4a8683509/SigProfilerMatrixGenerator-1.0.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.11
2024-08-07T18:08:38,365   Found link https://files.pythonhosted.org/packages/21/2e/5b81999306f02c711b74ce4c88a3725efb6502ce87b031a95e7f432715d2/SigProfilerMatrixGenerator-1.0.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.12
2024-08-07T18:08:38,365   Found link https://files.pythonhosted.org/packages/a6/ca/ec6bb5899fb7f42110102afa2636d04710b917e755b6b80fdef21e80c090/SigProfilerMatrixGenerator-1.0.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.13
2024-08-07T18:08:38,366   Found link https://files.pythonhosted.org/packages/aa/5f/9eb3e025425af0a8b4ab4dbd629158b53bdf092ec3ba73d87f5bb5af643a/SigProfilerMatrixGenerator-1.0.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.14
2024-08-07T18:08:38,367   Found link https://files.pythonhosted.org/packages/31/e8/5aacb489a0ad39cf892cbc7b91be93ee873e009a28c2ca0fda6ff210f1c2/SigProfilerMatrixGenerator-1.0.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.15
2024-08-07T18:08:38,367   Found link https://files.pythonhosted.org/packages/30/5a/62a7b4224b255e639b0177e9ddc719dce52ca0db701382e9c02a3267c1b3/SigProfilerMatrixGenerator-1.0.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.16
2024-08-07T18:08:38,368   Found link https://files.pythonhosted.org/packages/25/df/a04f48053469efffed5a2574bfdfd11f2fd6f6250596aebb9207fe5ddbd1/SigProfilerMatrixGenerator-1.0.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.17
2024-08-07T18:08:38,369   Found link https://files.pythonhosted.org/packages/e4/81/6e8a9f2c9b4454d8b7df1a2f889d9bfa20786f368469a0082859f9a226e9/SigProfilerMatrixGenerator-1.0.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.18
2024-08-07T18:08:38,369   Found link https://files.pythonhosted.org/packages/8c/07/d6e05005a349db7a2c6e33a03926a0dad081882cbd82781095070e5e6dd2/SigProfilerMatrixGenerator-1.0.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.19
2024-08-07T18:08:38,370   Found link https://files.pythonhosted.org/packages/e7/20/e149f3195446422925cf948bcc7e5aa8ccd6a89cd673d72aa481b7187e85/SigProfilerMatrixGenerator-1.0.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.20
2024-08-07T18:08:38,371   Found link https://files.pythonhosted.org/packages/dc/3f/3a10507445e03d04dcb132d4cf450a510f14076bb9b17284744cd9647cc6/SigProfilerMatrixGenerator-1.0.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.21
2024-08-07T18:08:38,372   Found link https://files.pythonhosted.org/packages/96/3f/4486e817c70d7d37084e168c33a8c77159c0cb5c931ab2afea1e771d94ed/SigProfilerMatrixGenerator-1.0.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.22
2024-08-07T18:08:38,372   Found link https://files.pythonhosted.org/packages/70/d6/0fb646f64373ff597bfc61020312d9f7ec781718043e5ab9e73348aaa77b/SigProfilerMatrixGenerator-1.0.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.23
2024-08-07T18:08:38,373   Found link https://files.pythonhosted.org/packages/cd/df/b2510bad2f657d52cfb18cab3de62b0de6fb7e7cab29bf7fb495eb97c731/SigProfilerMatrixGenerator-1.0.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.24
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2024-08-07T18:08:38,375   Found link https://files.pythonhosted.org/packages/fe/ea/0c801757b97f261a9e4e1a4853a5b8debfff9570b28658ab842966a50e0f/SigProfilerMatrixGenerator-1.1.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.0
2024-08-07T18:08:38,375   Found link https://files.pythonhosted.org/packages/9f/b3/bfc2353a925e4adbaa27767e37fcf0df31a68fb78deacff8a52cb7fd7563/SigProfilerMatrixGenerator-1.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.1
2024-08-07T18:08:38,376   Found link https://files.pythonhosted.org/packages/f3/66/47c778b0e3eb8e486a92ef9449a94c7ca1ed43ff376c848f943dfde7c596/SigProfilerMatrixGenerator-1.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.2
2024-08-07T18:08:38,377   Found link https://files.pythonhosted.org/packages/d2/b1/9a5769d42d5d513cebb7bce116a823957ee2a49c32e068634c0294cca07c/SigProfilerMatrixGenerator-1.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.3
2024-08-07T18:08:38,377   Found link https://files.pythonhosted.org/packages/71/5d/0f501a5a374e675476177d0731c9e048ea6cc964902b185beb673849d0f0/SigProfilerMatrixGenerator-1.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.4
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2024-08-07T18:08:38,379   Found link https://files.pythonhosted.org/packages/f2/6f/3c38ca097d04587ea2807d6002783f4b5740cadfbb807d23c80b909aff13/SigProfilerMatrixGenerator-1.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.7
2024-08-07T18:08:38,380   Found link https://files.pythonhosted.org/packages/bd/48/84e1963975ceab1231f2913efcc3f7cb8cb48fd162e97c70fc1289c3132c/SigProfilerMatrixGenerator-1.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.8
2024-08-07T18:08:38,380   Found link https://files.pythonhosted.org/packages/23/0d/834403077582d0634f8134dc0356ec1a29901c22fb864cd0c541b1c231ef/SigProfilerMatrixGenerator-1.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.9
2024-08-07T18:08:38,382   Found link https://files.pythonhosted.org/packages/20/d7/3cc96e6bb315ec5dd52b2063a13d279276df7fe44475388c1c48c156c53c/SigProfilerMatrixGenerator-1.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.10
2024-08-07T18:08:38,382   Found link https://files.pythonhosted.org/packages/4d/9a/e833c99f878bf981d6c0a0ee6f2e61ffb700943be9135f777df873802444/SigProfilerMatrixGenerator-1.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.11
2024-08-07T18:08:38,383   Found link https://files.pythonhosted.org/packages/3a/1f/2af2e39b20153ff125e5a5eea041411141ee78935f3e6053be62c33df6e2/SigProfilerMatrixGenerator-1.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.12
2024-08-07T18:08:38,383   Found link https://files.pythonhosted.org/packages/31/09/67b586235317fb7f025b3958092e21cd4ac78a3e4868099147e5bbecb10d/SigProfilerMatrixGenerator-1.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.13
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2024-08-07T18:08:38,439   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/ff/65/26059d79cd6c48ad4388e7813eecc56f77e6e8bb3626414c94d552103fc8/SigProfilerMatrixGenerator-1.2.25-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
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2024-08-07T18:08:38,440   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/a2/90/9f3fb1cdd7c9cace3cfe645e0635f978e9c7ef938301691943e86f2af573/SigProfilerMatrixGenerator-1.2.26-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-08-07T18:08:38,441   Found link https://files.pythonhosted.org/packages/41/60/9933d86ea9e982cd684eff2313cd233fabe06fa9901fa4d16f87c6c9ab92/SigProfilerMatrixGenerator-1.2.26.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.26
2024-08-07T18:08:38,442   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/ea/43/791f7741f152dadd488e30846d986c77bfc1cd37ab989f50d963976c4f29/SigProfilerMatrixGenerator-1.2.27-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-08-07T18:08:38,443   Found link https://files.pythonhosted.org/packages/17/31/d5ab5957d3267c803970d15aea1bb7363fbe61d20a26d24f393beadf665e/SigProfilerMatrixGenerator-1.2.27.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.27
2024-08-07T18:08:38,443   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/ee/d0/fa1fc000174edd008efd67a489cccafdc3ed624c3d08ebc025073e1e5d0e/SigProfilerMatrixGenerator-1.2.28-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-08-07T18:08:38,444   Found link https://files.pythonhosted.org/packages/98/2c/1a80b4b318b0e5dfb758e86907eefc5912e3448fd4cd9f9416a2f406bce5/SigProfilerMatrixGenerator-1.2.28.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.28
2024-08-07T18:08:38,445 Fetching project page and analyzing links: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,446 Getting page https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,447 Found index url https://www.piwheels.org/simple/
2024-08-07T18:08:38,502 Fetched page https://www.piwheels.org/simple/sigprofilermatrixgenerator/ as text/html
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2024-08-07T18:08:38,532   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.25-py3-none-any.whl#sha256=c311b4da14fd50c8af294c6c7c883bf785159551149520b3a7baf2d77ac877ad (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-08-07T18:08:38,533   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.24-py3-none-any.whl#sha256=9e0524d443426fff2bf3ddf5e3fb1f23fe4ded72a05affe5c75f21c650900404 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
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2024-08-07T18:08:38,579   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.21-py3-none-any.whl#sha256=9499c45cc55c74f2611b656cb8c826618e6c5dbf866d411f490f04d0f9426ad6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,579   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.20-py3-none-any.whl#sha256=66a22a8ae93c7fb4e9baad202887e052740893fe0a61880b9f1ec95a09d1c0a0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,580   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.19-py3-none-any.whl#sha256=365cdf3ead6ecb7d2cf9490b1fed6d629726f24d561d7630b30941cb1a29f348 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,580   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.18-py3-none-any.whl#sha256=449947ad34781b25cae1349dcd4b6d4549946ba009835356645bf7595b5c111a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,581   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.17-py3-none-any.whl#sha256=ae0861d72d43dec0054d6516d9076cb80508514b36f46150767ab5341333d148 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,582   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.16-py3-none-any.whl#sha256=1001d7d6c2fa91680ec31c47ce6a079da2a667accc48484e0a7da3d77aac8740 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,582   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.15-py3-none-any.whl#sha256=288504536508f749d994d31930658f022b5401332bc810ded63b3cd0a49cef3e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,583   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.14-py3-none-any.whl#sha256=35fcddd4e462deee7959573e5e45dfa75d3f2b4ffce81939750a96eedac0b49d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,583   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.13-py3-none-any.whl#sha256=fbb27c504c29ed32596c118b00da8aa59f67854e86799b0b330f8a9f2470037a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,584   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.12-py3-none-any.whl#sha256=24992b19ac04769baed3433c1b795f09597f608117d9e33c67bf40e474e99e84 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,584   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.11-py3-none-any.whl#sha256=c3b1761ab13a6dfb85050409e587eff691595bbf3b22248d8e45024792d0873d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,585   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.10-py3-none-any.whl#sha256=ee4542b0f7f955e9ed1a2377647dcdfe279cb2f4abb1c9f82f65331a696466e6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,585   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.9-py3-none-any.whl#sha256=15e07c22774c555e633b3c7365931ec869749f9e93699b316ad8b88b90e98661 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,586   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.8-py3-none-any.whl#sha256=f8f015f2654820e23e139b06dad20b2b070c591cf3804c89728031fd465a1761 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,586   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.7-py3-none-any.whl#sha256=2b7197f9e7546455ecec51a3668c35746722be54000330897cdb3bab16b2846c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,587   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.6-py3-none-any.whl#sha256=9bb77768a94a36b84528c72712dcbab7060347122efa53e72efa67f7db5a4c1d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,587   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.5-py3-none-any.whl#sha256=3bf26507e0f667a2958c8b58caa1307bf15b8dc11912252798fc227e99e98a0b (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,588   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.4-py3-none-any.whl#sha256=68f6f2f696d2ada3a780a59862675d42663d7c9e2e10563337ec01ab3e357dff (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,588   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.3-py3-none-any.whl#sha256=2c8f7184b84f55dd295a9ccbe96ba73b3f8746271bfd3844e25b8204b8df2044 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,589   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.2-py3-none-any.whl#sha256=a77ce882dc149901406d631720a444648a7acde033b8599373cd1cf50ea132b5 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,589   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.1-py3-none-any.whl#sha256=e2a5663dc832700fdb64b22350ca8b0d792920cd1a1ec3cbec1f670ebd911a30 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-08-07T18:08:38,590 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,590 Skipping link: not a file: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-08-07T18:08:38,623 Given no hashes to check 1 links for project 'sigprofilermatrixgenerator': discarding no candidates
2024-08-07T18:08:38,643 Collecting sigprofilermatrixgenerator==1.2.28
2024-08-07T18:08:38,646   Created temporary directory: /tmp/pip-unpack-h2cjpub0
2024-08-07T18:08:38,665   Downloading SigProfilerMatrixGenerator-1.2.28.tar.gz (40.6 MB)
2024-08-07T18:08:49,330   Added sigprofilermatrixgenerator==1.2.28 from https://files.pythonhosted.org/packages/98/2c/1a80b4b318b0e5dfb758e86907eefc5912e3448fd4cd9f9416a2f406bce5/SigProfilerMatrixGenerator-1.2.28.tar.gz to build tracker '/tmp/pip-build-tracker-phxjgu5s'
2024-08-07T18:08:49,332   Running setup.py (path:/tmp/pip-wheel-uwddf7g1/sigprofilermatrixgenerator_5b6051a0ccc44cd799e1dbf329f1c2a4/setup.py) egg_info for package sigprofilermatrixgenerator
2024-08-07T18:08:49,333   Created temporary directory: /tmp/pip-pip-egg-info-nw_nmkg3
2024-08-07T18:08:49,333   Preparing metadata (setup.py): started
2024-08-07T18:08:49,335   Running command python setup.py egg_info
2024-08-07T18:08:50,489   running egg_info
2024-08-07T18:08:50,490   creating /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info
2024-08-07T18:08:50,518   writing /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-08-07T18:08:50,523   writing dependency_links to /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-08-07T18:08:50,525   writing entry points to /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-08-07T18:08:50,528   writing requirements to /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/requires.txt
2024-08-07T18:08:50,529   writing top-level names to /tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-08-07T18:08:50,531   writing manifest file '/tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-08-07T18:08:50,618   reading manifest file '/tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-08-07T18:08:50,620   reading manifest template 'MANIFEST.in'
2024-08-07T18:08:50,947   adding license file 'LICENSE'
2024-08-07T18:08:50,978   writing manifest file '/tmp/pip-pip-egg-info-nw_nmkg3/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-08-07T18:08:51,093   Preparing metadata (setup.py): finished with status 'done'
2024-08-07T18:08:51,097   Source in /tmp/pip-wheel-uwddf7g1/sigprofilermatrixgenerator_5b6051a0ccc44cd799e1dbf329f1c2a4 has version 1.2.28, which satisfies requirement sigprofilermatrixgenerator==1.2.28 from https://files.pythonhosted.org/packages/98/2c/1a80b4b318b0e5dfb758e86907eefc5912e3448fd4cd9f9416a2f406bce5/SigProfilerMatrixGenerator-1.2.28.tar.gz
2024-08-07T18:08:51,098   Removed sigprofilermatrixgenerator==1.2.28 from https://files.pythonhosted.org/packages/98/2c/1a80b4b318b0e5dfb758e86907eefc5912e3448fd4cd9f9416a2f406bce5/SigProfilerMatrixGenerator-1.2.28.tar.gz from build tracker '/tmp/pip-build-tracker-phxjgu5s'
2024-08-07T18:08:51,107 Created temporary directory: /tmp/pip-unpack-audclx1r
2024-08-07T18:08:51,108 Created temporary directory: /tmp/pip-unpack-dp1xsahu
2024-08-07T18:08:51,109 Building wheels for collected packages: sigprofilermatrixgenerator
2024-08-07T18:08:51,113   Created temporary directory: /tmp/pip-wheel-z22dpmcw
2024-08-07T18:08:51,114   Building wheel for sigprofilermatrixgenerator (setup.py): started
2024-08-07T18:08:51,115   Destination directory: /tmp/pip-wheel-z22dpmcw
2024-08-07T18:08:51,116   Running command python setup.py bdist_wheel
2024-08-07T18:08:52,183   running bdist_wheel
2024-08-07T18:08:52,324   running build
2024-08-07T18:08:52,325   running build_py
2024-08-07T18:08:52,354   creating build
2024-08-07T18:08:52,355   creating build/lib
2024-08-07T18:08:52,355   creating build/lib/SigProfilerMatrixGenerator
2024-08-07T18:08:52,356   copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator
2024-08-07T18:08:52,359   copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator
2024-08-07T18:08:52,361   copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator
2024-08-07T18:08:52,363   copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator
2024-08-07T18:08:52,364   running egg_info
2024-08-07T18:08:52,391   writing SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-08-07T18:08:52,395   writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-08-07T18:08:52,397   writing entry points to SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-08-07T18:08:52,399   writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt
2024-08-07T18:08:52,400   writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-08-07T18:08:52,429   reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-08-07T18:08:52,450   reading manifest template 'MANIFEST.in'
2024-08-07T18:08:52,761   adding license file 'LICENSE'
2024-08-07T18:08:52,806   writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-08-07T18:08:52,810   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration.
2024-08-07T18:08:52,811   !!

2024-08-07T18:08:52,812           ********************************************************************************
2024-08-07T18:08:52,813           ############################
2024-08-07T18:08:52,813           # Package would be ignored #
2024-08-07T18:08:52,814           ############################
2024-08-07T18:08:52,814           Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1],
2024-08-07T18:08:52,815           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,816           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,816           package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added
2024-08-07T18:08:52,817           to the `packages` configuration field.

2024-08-07T18:08:52,818           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,818           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,819           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,820           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,821           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,822           If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are
2024-08-07T18:08:52,823           already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via
2024-08-07T18:08:52,823           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,824           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,824           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,825           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,827           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,828           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,828                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,829                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,829                 directory, all directories are treated like packages.
2024-08-07T18:08:52,830           ********************************************************************************

2024-08-07T18:08:52,831   !!
2024-08-07T18:08:52,831     check.warn(importable)
2024-08-07T18:08:52,832   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration.
2024-08-07T18:08:52,832   !!

2024-08-07T18:08:52,833           ********************************************************************************
2024-08-07T18:08:52,833           ############################
2024-08-07T18:08:52,834           # Package would be ignored #
2024-08-07T18:08:52,834           ############################
2024-08-07T18:08:52,835           Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1],
2024-08-07T18:08:52,835           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,836           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,836           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added
2024-08-07T18:08:52,837           to the `packages` configuration field.

2024-08-07T18:08:52,838           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,838           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,839           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,840           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,841           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,842           If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are
2024-08-07T18:08:52,842           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via
2024-08-07T18:08:52,843           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,843           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,844           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,845           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,846           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,848           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,848                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,849                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,850                 directory, all directories are treated like packages.
2024-08-07T18:08:52,850           ********************************************************************************

2024-08-07T18:08:52,851   !!
2024-08-07T18:08:52,852     check.warn(importable)
2024-08-07T18:08:52,852   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration.
2024-08-07T18:08:52,853   !!

2024-08-07T18:08:52,854           ********************************************************************************
2024-08-07T18:08:52,854           ############################
2024-08-07T18:08:52,855           # Package would be ignored #
2024-08-07T18:08:52,856           ############################
2024-08-07T18:08:52,856           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1],
2024-08-07T18:08:52,856           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,857           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,857           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added
2024-08-07T18:08:52,858           to the `packages` configuration field.

2024-08-07T18:08:52,858           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,859           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,859           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,860           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,861           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,862           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are
2024-08-07T18:08:52,862           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via
2024-08-07T18:08:52,863           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,863           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,863           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,864           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,865           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,866           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,867                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,867                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,868                 directory, all directories are treated like packages.
2024-08-07T18:08:52,868           ********************************************************************************

2024-08-07T18:08:52,869   !!
2024-08-07T18:08:52,870     check.warn(importable)
2024-08-07T18:08:52,870   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration.
2024-08-07T18:08:52,871   !!

2024-08-07T18:08:52,871           ********************************************************************************
2024-08-07T18:08:52,872           ############################
2024-08-07T18:08:52,872           # Package would be ignored #
2024-08-07T18:08:52,873           ############################
2024-08-07T18:08:52,873           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1],
2024-08-07T18:08:52,874           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,875           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,875           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added
2024-08-07T18:08:52,876           to the `packages` configuration field.

2024-08-07T18:08:52,876           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,877           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,877           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,878           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,879           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,880           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are
2024-08-07T18:08:52,880           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via
2024-08-07T18:08:52,881           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,881           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,882           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,882           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,883           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,884           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,884                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,885                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,885                 directory, all directories are treated like packages.
2024-08-07T18:08:52,886           ********************************************************************************

2024-08-07T18:08:52,886   !!
2024-08-07T18:08:52,887     check.warn(importable)
2024-08-07T18:08:52,887   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.SV' is absent from the `packages` configuration.
2024-08-07T18:08:52,887   !!

2024-08-07T18:08:52,888           ********************************************************************************
2024-08-07T18:08:52,889           ############################
2024-08-07T18:08:52,889           # Package would be ignored #
2024-08-07T18:08:52,890           ############################
2024-08-07T18:08:52,890           Python recognizes 'SigProfilerMatrixGenerator.references.SV' as an importable package[^1],
2024-08-07T18:08:52,891           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,891           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,892           package, please make sure that 'SigProfilerMatrixGenerator.references.SV' is explicitly added
2024-08-07T18:08:52,892           to the `packages` configuration field.

2024-08-07T18:08:52,893           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,894           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,894           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,895           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,896           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,897           If you don't want 'SigProfilerMatrixGenerator.references.SV' to be distributed and are
2024-08-07T18:08:52,897           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV' via
2024-08-07T18:08:52,898           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,898           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,899           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,900           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,901           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,902           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,903                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,903                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,904                 directory, all directories are treated like packages.
2024-08-07T18:08:52,904           ********************************************************************************

2024-08-07T18:08:52,905   !!
2024-08-07T18:08:52,906     check.warn(importable)
2024-08-07T18:08:52,906   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration.
2024-08-07T18:08:52,906   !!

2024-08-07T18:08:52,907           ********************************************************************************
2024-08-07T18:08:52,907           ############################
2024-08-07T18:08:52,908           # Package would be ignored #
2024-08-07T18:08:52,908           ############################
2024-08-07T18:08:52,909           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1],
2024-08-07T18:08:52,909           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,910           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,910           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added
2024-08-07T18:08:52,910           to the `packages` configuration field.

2024-08-07T18:08:52,911           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,912           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,912           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,913           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,914           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,915           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are
2024-08-07T18:08:52,915           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via
2024-08-07T18:08:52,916           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,916           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,916           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,917           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,918           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,919           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,920                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,920                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,921                 directory, all directories are treated like packages.
2024-08-07T18:08:52,921           ********************************************************************************

2024-08-07T18:08:52,922   !!
2024-08-07T18:08:52,923     check.warn(importable)
2024-08-07T18:08:52,923   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration.
2024-08-07T18:08:52,924   !!

2024-08-07T18:08:52,925           ********************************************************************************
2024-08-07T18:08:52,925           ############################
2024-08-07T18:08:52,926           # Package would be ignored #
2024-08-07T18:08:52,926           ############################
2024-08-07T18:08:52,926           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1],
2024-08-07T18:08:52,927           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,928           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,928           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added
2024-08-07T18:08:52,929           to the `packages` configuration field.

2024-08-07T18:08:52,929           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,930           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,930           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,931           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,931           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,932           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are
2024-08-07T18:08:52,932           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via
2024-08-07T18:08:52,933           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,933           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,934           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,935           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,935           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,936           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,937                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,937                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,938                 directory, all directories are treated like packages.
2024-08-07T18:08:52,938           ********************************************************************************

2024-08-07T18:08:52,939   !!
2024-08-07T18:08:52,939     check.warn(importable)
2024-08-07T18:08:52,940   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is absent from the `packages` configuration.
2024-08-07T18:08:52,940   !!

2024-08-07T18:08:52,941           ********************************************************************************
2024-08-07T18:08:52,942           ############################
2024-08-07T18:08:52,942           # Package would be ignored #
2024-08-07T18:08:52,943           ############################
2024-08-07T18:08:52,943           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' as an importable package[^1],
2024-08-07T18:08:52,943           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,944           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,945           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' is explicitly added
2024-08-07T18:08:52,945           to the `packages` configuration field.

2024-08-07T18:08:52,946           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,947           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,947           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,948           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,949           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,950           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' to be distributed and are
2024-08-07T18:08:52,951           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.VCF' via
2024-08-07T18:08:52,951           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,952           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,952           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,953           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,954           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,955           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,955                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,955                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,956                 directory, all directories are treated like packages.
2024-08-07T18:08:52,956           ********************************************************************************

2024-08-07T18:08:52,957   !!
2024-08-07T18:08:52,957     check.warn(importable)
2024-08-07T18:08:52,958   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration.
2024-08-07T18:08:52,958   !!

2024-08-07T18:08:52,959           ********************************************************************************
2024-08-07T18:08:52,959           ############################
2024-08-07T18:08:52,960           # Package would be ignored #
2024-08-07T18:08:52,960           ############################
2024-08-07T18:08:52,960           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1],
2024-08-07T18:08:52,961           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,962           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,962           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added
2024-08-07T18:08:52,963           to the `packages` configuration field.

2024-08-07T18:08:52,964           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,964           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,965           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,966           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,967           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,968           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are
2024-08-07T18:08:52,968           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via
2024-08-07T18:08:52,969           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,969           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,970           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,971           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,972           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,973           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,973                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,974                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,974                 directory, all directories are treated like packages.
2024-08-07T18:08:52,975           ********************************************************************************

2024-08-07T18:08:52,976   !!
2024-08-07T18:08:52,976     check.warn(importable)
2024-08-07T18:08:52,977   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration.
2024-08-07T18:08:52,977   !!

2024-08-07T18:08:52,978           ********************************************************************************
2024-08-07T18:08:52,978           ############################
2024-08-07T18:08:52,979           # Package would be ignored #
2024-08-07T18:08:52,979           ############################
2024-08-07T18:08:52,979           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1],
2024-08-07T18:08:52,980           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,980           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,981           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added
2024-08-07T18:08:52,981           to the `packages` configuration field.

2024-08-07T18:08:52,982           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:52,982           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:52,983           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:52,984           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:52,984           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:52,985           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are
2024-08-07T18:08:52,986           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via
2024-08-07T18:08:52,986           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:52,986           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:52,987           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:52,988           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:52,989           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:52,990           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:52,990                 even if it does not contain any `.py` files.
2024-08-07T18:08:52,991                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:52,991                 directory, all directories are treated like packages.
2024-08-07T18:08:52,992           ********************************************************************************

2024-08-07T18:08:52,992   !!
2024-08-07T18:08:52,993     check.warn(importable)
2024-08-07T18:08:52,993   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration.
2024-08-07T18:08:52,994   !!

2024-08-07T18:08:52,995           ********************************************************************************
2024-08-07T18:08:52,995           ############################
2024-08-07T18:08:52,995           # Package would be ignored #
2024-08-07T18:08:52,996           ############################
2024-08-07T18:08:52,996           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1],
2024-08-07T18:08:52,997           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:52,998           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:52,998           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added
2024-08-07T18:08:52,999           to the `packages` configuration field.

2024-08-07T18:08:53,000           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,000           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,000           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,001           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,002           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,002           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are
2024-08-07T18:08:53,003           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via
2024-08-07T18:08:53,003           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,003           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,004           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,004           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,005           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,006           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,007                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,007                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,007                 directory, all directories are treated like packages.
2024-08-07T18:08:53,008           ********************************************************************************

2024-08-07T18:08:53,009   !!
2024-08-07T18:08:53,009     check.warn(importable)
2024-08-07T18:08:53,010   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration.
2024-08-07T18:08:53,010   !!

2024-08-07T18:08:53,011           ********************************************************************************
2024-08-07T18:08:53,011           ############################
2024-08-07T18:08:53,012           # Package would be ignored #
2024-08-07T18:08:53,012           ############################
2024-08-07T18:08:53,012           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1],
2024-08-07T18:08:53,013           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,014           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,014           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added
2024-08-07T18:08:53,015           to the `packages` configuration field.

2024-08-07T18:08:53,016           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,016           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,016           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,017           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,018           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,019           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are
2024-08-07T18:08:53,019           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via
2024-08-07T18:08:53,020           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,021           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,021           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,022           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,022           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,023           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,024                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,024                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,025                 directory, all directories are treated like packages.
2024-08-07T18:08:53,025           ********************************************************************************

2024-08-07T18:08:53,026   !!
2024-08-07T18:08:53,026     check.warn(importable)
2024-08-07T18:08:53,026   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration.
2024-08-07T18:08:53,027   !!

2024-08-07T18:08:53,028           ********************************************************************************
2024-08-07T18:08:53,028           ############################
2024-08-07T18:08:53,029           # Package would be ignored #
2024-08-07T18:08:53,029           ############################
2024-08-07T18:08:53,030           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1],
2024-08-07T18:08:53,030           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,031           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,032           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added
2024-08-07T18:08:53,032           to the `packages` configuration field.

2024-08-07T18:08:53,033           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,034           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,035           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,036           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,036           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,038           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are
2024-08-07T18:08:53,038           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via
2024-08-07T18:08:53,038           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,039           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,039           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,040           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,041           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,043           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,043                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,044                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,044                 directory, all directories are treated like packages.
2024-08-07T18:08:53,044           ********************************************************************************

2024-08-07T18:08:53,046   !!
2024-08-07T18:08:53,046     check.warn(importable)
2024-08-07T18:08:53,046   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration.
2024-08-07T18:08:53,047   !!

2024-08-07T18:08:53,047           ********************************************************************************
2024-08-07T18:08:53,048           ############################
2024-08-07T18:08:53,048           # Package would be ignored #
2024-08-07T18:08:53,048           ############################
2024-08-07T18:08:53,049           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1],
2024-08-07T18:08:53,049           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,050           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,050           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added
2024-08-07T18:08:53,051           to the `packages` configuration field.

2024-08-07T18:08:53,051           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,052           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,052           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,053           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,054           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,055           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are
2024-08-07T18:08:53,055           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via
2024-08-07T18:08:53,056           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,056           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,057           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,058           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,058           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,060           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,060                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,060                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,061                 directory, all directories are treated like packages.
2024-08-07T18:08:53,061           ********************************************************************************

2024-08-07T18:08:53,062   !!
2024-08-07T18:08:53,063     check.warn(importable)
2024-08-07T18:08:53,063   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration.
2024-08-07T18:08:53,064   !!

2024-08-07T18:08:53,065           ********************************************************************************
2024-08-07T18:08:53,065           ############################
2024-08-07T18:08:53,066           # Package would be ignored #
2024-08-07T18:08:53,066           ############################
2024-08-07T18:08:53,067           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1],
2024-08-07T18:08:53,067           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,068           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,068           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added
2024-08-07T18:08:53,069           to the `packages` configuration field.

2024-08-07T18:08:53,070           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,070           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,071           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,071           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,072           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,073           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are
2024-08-07T18:08:53,073           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via
2024-08-07T18:08:53,074           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,074           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,074           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,075           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,076           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,077           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,078                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,078                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,078                 directory, all directories are treated like packages.
2024-08-07T18:08:53,079           ********************************************************************************

2024-08-07T18:08:53,080   !!
2024-08-07T18:08:53,080     check.warn(importable)
2024-08-07T18:08:53,080   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration.
2024-08-07T18:08:53,081   !!

2024-08-07T18:08:53,082           ********************************************************************************
2024-08-07T18:08:53,082           ############################
2024-08-07T18:08:53,082           # Package would be ignored #
2024-08-07T18:08:53,083           ############################
2024-08-07T18:08:53,083           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1],
2024-08-07T18:08:53,084           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,085           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,085           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added
2024-08-07T18:08:53,086           to the `packages` configuration field.

2024-08-07T18:08:53,087           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,087           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,087           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,088           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,089           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,090           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are
2024-08-07T18:08:53,091           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via
2024-08-07T18:08:53,091           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,092           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,092           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,093           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,094           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,096           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,096                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,096                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,097                 directory, all directories are treated like packages.
2024-08-07T18:08:53,097           ********************************************************************************

2024-08-07T18:08:53,098   !!
2024-08-07T18:08:53,099     check.warn(importable)
2024-08-07T18:08:53,099   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration.
2024-08-07T18:08:53,099   !!

2024-08-07T18:08:53,100           ********************************************************************************
2024-08-07T18:08:53,101           ############################
2024-08-07T18:08:53,101           # Package would be ignored #
2024-08-07T18:08:53,102           ############################
2024-08-07T18:08:53,102           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1],
2024-08-07T18:08:53,102           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,103           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,104           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added
2024-08-07T18:08:53,104           to the `packages` configuration field.

2024-08-07T18:08:53,105           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,106           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,106           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,107           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,108           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,109           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are
2024-08-07T18:08:53,109           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via
2024-08-07T18:08:53,110           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,110           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,110           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,111           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,112           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,114           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,115                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,115                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,116                 directory, all directories are treated like packages.
2024-08-07T18:08:53,116           ********************************************************************************

2024-08-07T18:08:53,117   !!
2024-08-07T18:08:53,118     check.warn(importable)
2024-08-07T18:08:53,118   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration.
2024-08-07T18:08:53,119   !!

2024-08-07T18:08:53,120           ********************************************************************************
2024-08-07T18:08:53,120           ############################
2024-08-07T18:08:53,120           # Package would be ignored #
2024-08-07T18:08:53,121           ############################
2024-08-07T18:08:53,121           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1],
2024-08-07T18:08:53,122           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,122           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,123           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added
2024-08-07T18:08:53,123           to the `packages` configuration field.

2024-08-07T18:08:53,124           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,124           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,124           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,125           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,126           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,127           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are
2024-08-07T18:08:53,127           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via
2024-08-07T18:08:53,127           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,128           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,128           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,129           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,130           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,131           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,132                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,132                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,133                 directory, all directories are treated like packages.
2024-08-07T18:08:53,133           ********************************************************************************

2024-08-07T18:08:53,134   !!
2024-08-07T18:08:53,134     check.warn(importable)
2024-08-07T18:08:53,135   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration.
2024-08-07T18:08:53,135   !!

2024-08-07T18:08:53,136           ********************************************************************************
2024-08-07T18:08:53,136           ############################
2024-08-07T18:08:53,137           # Package would be ignored #
2024-08-07T18:08:53,137           ############################
2024-08-07T18:08:53,138           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1],
2024-08-07T18:08:53,138           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,139           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,139           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added
2024-08-07T18:08:53,140           to the `packages` configuration field.

2024-08-07T18:08:53,141           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,141           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,142           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,142           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,143           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,144           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are
2024-08-07T18:08:53,144           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via
2024-08-07T18:08:53,145           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,145           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,145           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,146           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,147           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,148           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,148                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,149                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,149                 directory, all directories are treated like packages.
2024-08-07T18:08:53,150           ********************************************************************************

2024-08-07T18:08:53,150   !!
2024-08-07T18:08:53,151     check.warn(importable)
2024-08-07T18:08:53,151   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration.
2024-08-07T18:08:53,152   !!

2024-08-07T18:08:53,153           ********************************************************************************
2024-08-07T18:08:53,153           ############################
2024-08-07T18:08:53,153           # Package would be ignored #
2024-08-07T18:08:53,154           ############################
2024-08-07T18:08:53,154           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1],
2024-08-07T18:08:53,155           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,156           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,156           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added
2024-08-07T18:08:53,157           to the `packages` configuration field.

2024-08-07T18:08:53,158           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,158           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,159           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,160           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,161           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,162           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are
2024-08-07T18:08:53,162           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via
2024-08-07T18:08:53,163           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,163           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,164           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,165           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,166           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,167           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,167                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,167                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,168                 directory, all directories are treated like packages.
2024-08-07T18:08:53,168           ********************************************************************************

2024-08-07T18:08:53,169   !!
2024-08-07T18:08:53,169     check.warn(importable)
2024-08-07T18:08:53,170   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration.
2024-08-07T18:08:53,170   !!

2024-08-07T18:08:53,171           ********************************************************************************
2024-08-07T18:08:53,171           ############################
2024-08-07T18:08:53,171           # Package would be ignored #
2024-08-07T18:08:53,172           ############################
2024-08-07T18:08:53,172           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1],
2024-08-07T18:08:53,173           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,174           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,174           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added
2024-08-07T18:08:53,175           to the `packages` configuration field.

2024-08-07T18:08:53,175           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,176           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,176           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,177           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,178           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,179           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are
2024-08-07T18:08:53,179           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via
2024-08-07T18:08:53,180           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,180           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,181           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,182           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,183           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,184           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,184                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,185                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,185                 directory, all directories are treated like packages.
2024-08-07T18:08:53,186           ********************************************************************************

2024-08-07T18:08:53,187   !!
2024-08-07T18:08:53,187     check.warn(importable)
2024-08-07T18:08:53,187   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration.
2024-08-07T18:08:53,188   !!

2024-08-07T18:08:53,189           ********************************************************************************
2024-08-07T18:08:53,189           ############################
2024-08-07T18:08:53,190           # Package would be ignored #
2024-08-07T18:08:53,190           ############################
2024-08-07T18:08:53,190           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1],
2024-08-07T18:08:53,191           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,191           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,192           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added
2024-08-07T18:08:53,192           to the `packages` configuration field.

2024-08-07T18:08:53,193           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,193           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,194           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,194           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,195           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,196           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are
2024-08-07T18:08:53,196           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via
2024-08-07T18:08:53,197           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,197           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,198           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,199           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,199           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,201           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,201                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,202                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,202                 directory, all directories are treated like packages.
2024-08-07T18:08:53,203           ********************************************************************************

2024-08-07T18:08:53,204   !!
2024-08-07T18:08:53,204     check.warn(importable)
2024-08-07T18:08:53,205   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration.
2024-08-07T18:08:53,205   !!

2024-08-07T18:08:53,206           ********************************************************************************
2024-08-07T18:08:53,207           ############################
2024-08-07T18:08:53,207           # Package would be ignored #
2024-08-07T18:08:53,208           ############################
2024-08-07T18:08:53,208           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1],
2024-08-07T18:08:53,208           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,209           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,210           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added
2024-08-07T18:08:53,210           to the `packages` configuration field.

2024-08-07T18:08:53,211           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,212           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,213           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,214           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,214           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,215           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are
2024-08-07T18:08:53,216           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via
2024-08-07T18:08:53,216           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,217           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,217           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,218           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,219           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,221           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,221                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,222                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,222                 directory, all directories are treated like packages.
2024-08-07T18:08:53,223           ********************************************************************************

2024-08-07T18:08:53,224   !!
2024-08-07T18:08:53,225     check.warn(importable)
2024-08-07T18:08:53,226   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration.
2024-08-07T18:08:53,226   !!

2024-08-07T18:08:53,227           ********************************************************************************
2024-08-07T18:08:53,228           ############################
2024-08-07T18:08:53,229           # Package would be ignored #
2024-08-07T18:08:53,229           ############################
2024-08-07T18:08:53,230           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1],
2024-08-07T18:08:53,230           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,232           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,232           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added
2024-08-07T18:08:53,233           to the `packages` configuration field.

2024-08-07T18:08:53,234           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,235           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,235           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,237           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,238           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,239           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are
2024-08-07T18:08:53,239           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via
2024-08-07T18:08:53,240           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,241           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,241           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,243           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,244           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,245           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,246                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,246                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,247                 directory, all directories are treated like packages.
2024-08-07T18:08:53,248           ********************************************************************************

2024-08-07T18:08:53,248   !!
2024-08-07T18:08:53,249     check.warn(importable)
2024-08-07T18:08:53,250   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration.
2024-08-07T18:08:53,250   !!

2024-08-07T18:08:53,251           ********************************************************************************
2024-08-07T18:08:53,252           ############################
2024-08-07T18:08:53,252           # Package would be ignored #
2024-08-07T18:08:53,253           ############################
2024-08-07T18:08:53,253           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1],
2024-08-07T18:08:53,254           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,255           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,256           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added
2024-08-07T18:08:53,256           to the `packages` configuration field.

2024-08-07T18:08:53,257           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,258           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,259           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,260           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,261           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,262           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are
2024-08-07T18:08:53,262           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via
2024-08-07T18:08:53,263           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,263           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,264           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,265           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,266           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,268           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,268                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,269                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,270                 directory, all directories are treated like packages.
2024-08-07T18:08:53,270           ********************************************************************************

2024-08-07T18:08:53,271   !!
2024-08-07T18:08:53,272     check.warn(importable)
2024-08-07T18:08:53,272   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration.
2024-08-07T18:08:53,273   !!

2024-08-07T18:08:53,275           ********************************************************************************
2024-08-07T18:08:53,275           ############################
2024-08-07T18:08:53,276           # Package would be ignored #
2024-08-07T18:08:53,276           ############################
2024-08-07T18:08:53,277           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1],
2024-08-07T18:08:53,277           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,278           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,278           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added
2024-08-07T18:08:53,279           to the `packages` configuration field.

2024-08-07T18:08:53,280           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,280           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,281           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,282           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,283           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,284           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are
2024-08-07T18:08:53,284           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via
2024-08-07T18:08:53,285           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,286           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,286           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,287           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,289           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,290           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,291                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,291                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,292                 directory, all directories are treated like packages.
2024-08-07T18:08:53,293           ********************************************************************************

2024-08-07T18:08:53,294   !!
2024-08-07T18:08:53,295     check.warn(importable)
2024-08-07T18:08:53,295   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration.
2024-08-07T18:08:53,296   !!

2024-08-07T18:08:53,298           ********************************************************************************
2024-08-07T18:08:53,298           ############################
2024-08-07T18:08:53,299           # Package would be ignored #
2024-08-07T18:08:53,300           ############################
2024-08-07T18:08:53,301           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1],
2024-08-07T18:08:53,302           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,303           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,303           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added
2024-08-07T18:08:53,304           to the `packages` configuration field.

2024-08-07T18:08:53,305           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,306           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,307           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,308           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,309           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,310           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are
2024-08-07T18:08:53,311           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via
2024-08-07T18:08:53,312           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,312           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,313           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,314           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,315           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,317           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,317                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,318                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,318                 directory, all directories are treated like packages.
2024-08-07T18:08:53,318           ********************************************************************************

2024-08-07T18:08:53,319   !!
2024-08-07T18:08:53,320     check.warn(importable)
2024-08-07T18:08:53,320   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration.
2024-08-07T18:08:53,320   !!

2024-08-07T18:08:53,321           ********************************************************************************
2024-08-07T18:08:53,322           ############################
2024-08-07T18:08:53,322           # Package would be ignored #
2024-08-07T18:08:53,323           ############################
2024-08-07T18:08:53,323           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1],
2024-08-07T18:08:53,324           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,324           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,325           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added
2024-08-07T18:08:53,325           to the `packages` configuration field.

2024-08-07T18:08:53,326           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,327           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,327           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,328           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,329           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,330           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are
2024-08-07T18:08:53,330           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via
2024-08-07T18:08:53,331           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,331           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,332           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,333           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,334           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,335           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,335                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,335                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,336                 directory, all directories are treated like packages.
2024-08-07T18:08:53,336           ********************************************************************************

2024-08-07T18:08:53,337   !!
2024-08-07T18:08:53,337     check.warn(importable)
2024-08-07T18:08:53,338   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration.
2024-08-07T18:08:53,338   !!

2024-08-07T18:08:53,339           ********************************************************************************
2024-08-07T18:08:53,339           ############################
2024-08-07T18:08:53,339           # Package would be ignored #
2024-08-07T18:08:53,340           ############################
2024-08-07T18:08:53,340           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1],
2024-08-07T18:08:53,341           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,341           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,342           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added
2024-08-07T18:08:53,342           to the `packages` configuration field.

2024-08-07T18:08:53,343           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,344           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,344           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,345           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,346           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,347           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are
2024-08-07T18:08:53,347           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via
2024-08-07T18:08:53,347           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,348           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,348           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,349           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,350           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,351           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,352                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,352                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,353                 directory, all directories are treated like packages.
2024-08-07T18:08:53,353           ********************************************************************************

2024-08-07T18:08:53,354   !!
2024-08-07T18:08:53,355     check.warn(importable)
2024-08-07T18:08:53,355   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration.
2024-08-07T18:08:53,356   !!

2024-08-07T18:08:53,357           ********************************************************************************
2024-08-07T18:08:53,357           ############################
2024-08-07T18:08:53,358           # Package would be ignored #
2024-08-07T18:08:53,358           ############################
2024-08-07T18:08:53,359           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1],
2024-08-07T18:08:53,359           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,360           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,360           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added
2024-08-07T18:08:53,361           to the `packages` configuration field.

2024-08-07T18:08:53,362           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,362           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,363           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,364           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,364           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,365           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are
2024-08-07T18:08:53,366           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via
2024-08-07T18:08:53,366           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,367           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,367           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,368           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,369           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,370           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,371                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,371                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,372                 directory, all directories are treated like packages.
2024-08-07T18:08:53,372           ********************************************************************************

2024-08-07T18:08:53,373   !!
2024-08-07T18:08:53,374     check.warn(importable)
2024-08-07T18:08:53,374   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is absent from the `packages` configuration.
2024-08-07T18:08:53,375   !!

2024-08-07T18:08:53,376           ********************************************************************************
2024-08-07T18:08:53,376           ############################
2024-08-07T18:08:53,377           # Package would be ignored #
2024-08-07T18:08:53,379           ############################
2024-08-07T18:08:53,383           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' as an importable package[^1],
2024-08-07T18:08:53,386           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,387           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,388           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is explicitly added
2024-08-07T18:08:53,388           to the `packages` configuration field.

2024-08-07T18:08:53,389           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,390           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,390           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,394           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,396           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,397           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' to be distributed and are
2024-08-07T18:08:53,397           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' via
2024-08-07T18:08:53,398           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,398           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,398           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,399           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,400           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,402           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,402                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,402                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,403                 directory, all directories are treated like packages.
2024-08-07T18:08:53,403           ********************************************************************************

2024-08-07T18:08:53,404   !!
2024-08-07T18:08:53,405     check.warn(importable)
2024-08-07T18:08:53,405   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration.
2024-08-07T18:08:53,406   !!

2024-08-07T18:08:53,407           ********************************************************************************
2024-08-07T18:08:53,407           ############################
2024-08-07T18:08:53,408           # Package would be ignored #
2024-08-07T18:08:53,408           ############################
2024-08-07T18:08:53,409           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1],
2024-08-07T18:08:53,409           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,410           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,411           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added
2024-08-07T18:08:53,412           to the `packages` configuration field.

2024-08-07T18:08:53,412           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,413           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,413           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,415           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,416           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,416           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are
2024-08-07T18:08:53,417           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via
2024-08-07T18:08:53,417           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,418           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,418           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,420           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,420           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,422           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,422                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,423                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,423                 directory, all directories are treated like packages.
2024-08-07T18:08:53,423           ********************************************************************************

2024-08-07T18:08:53,424   !!
2024-08-07T18:08:53,425     check.warn(importable)
2024-08-07T18:08:53,425   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration.
2024-08-07T18:08:53,426   !!

2024-08-07T18:08:53,426           ********************************************************************************
2024-08-07T18:08:53,427           ############################
2024-08-07T18:08:53,427           # Package would be ignored #
2024-08-07T18:08:53,428           ############################
2024-08-07T18:08:53,428           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1],
2024-08-07T18:08:53,429           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,430           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,430           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added
2024-08-07T18:08:53,431           to the `packages` configuration field.

2024-08-07T18:08:53,432           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,432           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,433           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,433           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,435           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,436           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are
2024-08-07T18:08:53,436           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via
2024-08-07T18:08:53,437           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,437           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,437           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,438           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,439           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,441           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,441                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,442                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,443                 directory, all directories are treated like packages.
2024-08-07T18:08:53,443           ********************************************************************************

2024-08-07T18:08:53,444   !!
2024-08-07T18:08:53,445     check.warn(importable)
2024-08-07T18:08:53,446   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration.
2024-08-07T18:08:53,446   !!

2024-08-07T18:08:53,447           ********************************************************************************
2024-08-07T18:08:53,448           ############################
2024-08-07T18:08:53,448           # Package would be ignored #
2024-08-07T18:08:53,449           ############################
2024-08-07T18:08:53,449           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1],
2024-08-07T18:08:53,450           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,451           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,451           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added
2024-08-07T18:08:53,451           to the `packages` configuration field.

2024-08-07T18:08:53,452           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,453           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,453           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,454           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,455           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,456           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are
2024-08-07T18:08:53,456           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via
2024-08-07T18:08:53,457           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,457           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,457           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,458           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,459           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,461           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,461                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,462                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,462                 directory, all directories are treated like packages.
2024-08-07T18:08:53,463           ********************************************************************************

2024-08-07T18:08:53,464   !!
2024-08-07T18:08:53,464     check.warn(importable)
2024-08-07T18:08:53,465   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration.
2024-08-07T18:08:53,465   !!

2024-08-07T18:08:53,466           ********************************************************************************
2024-08-07T18:08:53,467           ############################
2024-08-07T18:08:53,467           # Package would be ignored #
2024-08-07T18:08:53,468           ############################
2024-08-07T18:08:53,468           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1],
2024-08-07T18:08:53,469           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,470           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,470           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added
2024-08-07T18:08:53,471           to the `packages` configuration field.

2024-08-07T18:08:53,472           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,472           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,473           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,474           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,475           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,476           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are
2024-08-07T18:08:53,476           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via
2024-08-07T18:08:53,477           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,477           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,478           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,478           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,479           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,481           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,481                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,482                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,482                 directory, all directories are treated like packages.
2024-08-07T18:08:53,483           ********************************************************************************

2024-08-07T18:08:53,483   !!
2024-08-07T18:08:53,484     check.warn(importable)
2024-08-07T18:08:53,484   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration.
2024-08-07T18:08:53,485   !!

2024-08-07T18:08:53,486           ********************************************************************************
2024-08-07T18:08:53,486           ############################
2024-08-07T18:08:53,487           # Package would be ignored #
2024-08-07T18:08:53,487           ############################
2024-08-07T18:08:53,488           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1],
2024-08-07T18:08:53,488           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,489           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,490           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added
2024-08-07T18:08:53,490           to the `packages` configuration field.

2024-08-07T18:08:53,491           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,492           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,492           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,493           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,494           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,495           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are
2024-08-07T18:08:53,496           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via
2024-08-07T18:08:53,496           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,497           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,497           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,498           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,500           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,501           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,502                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,502                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,502                 directory, all directories are treated like packages.
2024-08-07T18:08:53,503           ********************************************************************************

2024-08-07T18:08:53,504   !!
2024-08-07T18:08:53,504     check.warn(importable)
2024-08-07T18:08:53,505   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration.
2024-08-07T18:08:53,505   !!

2024-08-07T18:08:53,506           ********************************************************************************
2024-08-07T18:08:53,506           ############################
2024-08-07T18:08:53,507           # Package would be ignored #
2024-08-07T18:08:53,507           ############################
2024-08-07T18:08:53,508           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1],
2024-08-07T18:08:53,508           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,509           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,510           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added
2024-08-07T18:08:53,510           to the `packages` configuration field.

2024-08-07T18:08:53,511           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,511           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,512           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,513           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,514           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,515           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are
2024-08-07T18:08:53,515           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via
2024-08-07T18:08:53,516           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,517           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,517           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,518           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,519           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,520           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,521                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,521                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,522                 directory, all directories are treated like packages.
2024-08-07T18:08:53,523           ********************************************************************************

2024-08-07T18:08:53,524   !!
2024-08-07T18:08:53,524     check.warn(importable)
2024-08-07T18:08:53,525   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration.
2024-08-07T18:08:53,525   !!

2024-08-07T18:08:53,526           ********************************************************************************
2024-08-07T18:08:53,527           ############################
2024-08-07T18:08:53,528           # Package would be ignored #
2024-08-07T18:08:53,528           ############################
2024-08-07T18:08:53,528           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1],
2024-08-07T18:08:53,529           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,530           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,530           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added
2024-08-07T18:08:53,531           to the `packages` configuration field.

2024-08-07T18:08:53,532           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,532           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,533           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,534           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,534           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,535           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are
2024-08-07T18:08:53,536           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via
2024-08-07T18:08:53,536           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,537           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,537           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,538           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,539           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,541           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,541                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,542                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,542                 directory, all directories are treated like packages.
2024-08-07T18:08:53,543           ********************************************************************************

2024-08-07T18:08:53,544   !!
2024-08-07T18:08:53,544     check.warn(importable)
2024-08-07T18:08:53,545   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration.
2024-08-07T18:08:53,545   !!

2024-08-07T18:08:53,546           ********************************************************************************
2024-08-07T18:08:53,546           ############################
2024-08-07T18:08:53,547           # Package would be ignored #
2024-08-07T18:08:53,547           ############################
2024-08-07T18:08:53,548           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1],
2024-08-07T18:08:53,548           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,549           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,550           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added
2024-08-07T18:08:53,551           to the `packages` configuration field.

2024-08-07T18:08:53,551           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,552           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,552           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,554           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,554           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,555           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are
2024-08-07T18:08:53,556           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via
2024-08-07T18:08:53,556           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,557           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,557           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,558           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,559           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,560           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,560                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,561                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,561                 directory, all directories are treated like packages.
2024-08-07T18:08:53,562           ********************************************************************************

2024-08-07T18:08:53,563   !!
2024-08-07T18:08:53,563     check.warn(importable)
2024-08-07T18:08:53,564   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration.
2024-08-07T18:08:53,564   !!

2024-08-07T18:08:53,565           ********************************************************************************
2024-08-07T18:08:53,566           ############################
2024-08-07T18:08:53,566           # Package would be ignored #
2024-08-07T18:08:53,567           ############################
2024-08-07T18:08:53,567           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1],
2024-08-07T18:08:53,568           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,569           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,569           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added
2024-08-07T18:08:53,569           to the `packages` configuration field.

2024-08-07T18:08:53,570           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,571           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,571           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,572           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,573           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,574           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are
2024-08-07T18:08:53,575           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via
2024-08-07T18:08:53,575           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,576           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,576           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,577           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,578           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,580           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,580                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,581                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,581                 directory, all directories are treated like packages.
2024-08-07T18:08:53,582           ********************************************************************************

2024-08-07T18:08:53,583   !!
2024-08-07T18:08:53,583     check.warn(importable)
2024-08-07T18:08:53,583   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration.
2024-08-07T18:08:53,584   !!

2024-08-07T18:08:53,585           ********************************************************************************
2024-08-07T18:08:53,585           ############################
2024-08-07T18:08:53,586           # Package would be ignored #
2024-08-07T18:08:53,586           ############################
2024-08-07T18:08:53,587           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1],
2024-08-07T18:08:53,587           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,588           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,588           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added
2024-08-07T18:08:53,589           to the `packages` configuration field.

2024-08-07T18:08:53,590           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,590           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,591           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,592           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,593           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,594           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are
2024-08-07T18:08:53,594           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via
2024-08-07T18:08:53,595           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,595           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,596           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,597           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,598           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,600           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,600                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,601                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,601                 directory, all directories are treated like packages.
2024-08-07T18:08:53,602           ********************************************************************************

2024-08-07T18:08:53,603   !!
2024-08-07T18:08:53,604     check.warn(importable)
2024-08-07T18:08:53,604   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is absent from the `packages` configuration.
2024-08-07T18:08:53,604   !!

2024-08-07T18:08:53,606           ********************************************************************************
2024-08-07T18:08:53,606           ############################
2024-08-07T18:08:53,607           # Package would be ignored #
2024-08-07T18:08:53,608           ############################
2024-08-07T18:08:53,608           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' as an importable package[^1],
2024-08-07T18:08:53,609           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,610           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,610           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is explicitly added
2024-08-07T18:08:53,611           to the `packages` configuration field.

2024-08-07T18:08:53,611           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,612           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,612           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,613           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,614           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,616           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' to be distributed and are
2024-08-07T18:08:53,616           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' via
2024-08-07T18:08:53,617           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,617           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,618           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,619           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,620           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,622           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,622                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,623                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,624                 directory, all directories are treated like packages.
2024-08-07T18:08:53,624           ********************************************************************************

2024-08-07T18:08:53,626   !!
2024-08-07T18:08:53,627     check.warn(importable)
2024-08-07T18:08:53,628   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration.
2024-08-07T18:08:53,629   !!

2024-08-07T18:08:53,631           ********************************************************************************
2024-08-07T18:08:53,632           ############################
2024-08-07T18:08:53,632           # Package would be ignored #
2024-08-07T18:08:53,633           ############################
2024-08-07T18:08:53,634           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1],
2024-08-07T18:08:53,635           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,636           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,637           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added
2024-08-07T18:08:53,637           to the `packages` configuration field.

2024-08-07T18:08:53,638           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,639           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,640           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,641           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,642           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,643           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are
2024-08-07T18:08:53,644           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via
2024-08-07T18:08:53,644           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,644           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,645           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,646           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,647           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,648           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,648                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,649                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,649                 directory, all directories are treated like packages.
2024-08-07T18:08:53,650           ********************************************************************************

2024-08-07T18:08:53,651   !!
2024-08-07T18:08:53,651     check.warn(importable)
2024-08-07T18:08:53,652   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration.
2024-08-07T18:08:53,652   !!

2024-08-07T18:08:53,654           ********************************************************************************
2024-08-07T18:08:53,654           ############################
2024-08-07T18:08:53,655           # Package would be ignored #
2024-08-07T18:08:53,655           ############################
2024-08-07T18:08:53,656           Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1],
2024-08-07T18:08:53,656           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,658           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,658           package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added
2024-08-07T18:08:53,659           to the `packages` configuration field.

2024-08-07T18:08:53,660           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,660           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,661           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,662           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,664           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,665           If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are
2024-08-07T18:08:53,665           already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via
2024-08-07T18:08:53,666           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,666           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,667           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,668           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,670           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,672           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,672                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,673                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,674                 directory, all directories are treated like packages.
2024-08-07T18:08:53,674           ********************************************************************************

2024-08-07T18:08:53,675   !!
2024-08-07T18:08:53,676     check.warn(importable)
2024-08-07T18:08:53,676   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration.
2024-08-07T18:08:53,677   !!

2024-08-07T18:08:53,677           ********************************************************************************
2024-08-07T18:08:53,678           ############################
2024-08-07T18:08:53,678           # Package would be ignored #
2024-08-07T18:08:53,679           ############################
2024-08-07T18:08:53,679           Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1],
2024-08-07T18:08:53,680           but it is absent from setuptools' `packages` configuration.

2024-08-07T18:08:53,681           This leads to an ambiguous overall configuration. If you want to distribute this
2024-08-07T18:08:53,681           package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added
2024-08-07T18:08:53,682           to the `packages` configuration field.

2024-08-07T18:08:53,683           Alternatively, you can also rely on setuptools' discovery methods
2024-08-07T18:08:53,683           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-08-07T18:08:53,684           instead of `find_packages(...)`/`find:`).

2024-08-07T18:08:53,685           You can read more about "package discovery" on setuptools documentation page:

2024-08-07T18:08:53,686           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-08-07T18:08:53,687           If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are
2024-08-07T18:08:53,687           already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via
2024-08-07T18:08:53,688           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-08-07T18:08:53,689           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-08-07T18:08:53,689           combination with a more fine grained `package-data` configuration.

2024-08-07T18:08:53,690           You can read more about "package data files" on setuptools documentation page:

2024-08-07T18:08:53,691           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-08-07T18:08:53,693           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-08-07T18:08:53,694                 even if it does not contain any `.py` files.
2024-08-07T18:08:53,694                 On the other hand, currently there is no concept of package data
2024-08-07T18:08:53,695                 directory, all directories are treated like packages.
2024-08-07T18:08:53,696           ********************************************************************************

2024-08-07T18:08:53,696   !!
2024-08-07T18:08:53,697     check.warn(importable)
2024-08-07T18:08:53,698   creating build/lib/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:53,698   copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:53,699   copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:53,699   creating build/lib/SigProfilerMatrixGenerator/references
2024-08-07T18:08:53,700   creating build/lib/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:08:53,701   copying SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:08:53,701   copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:08:53,702   copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:08:53,703   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:08:53,703   copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:08:53,704   copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:08:53,704   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-08-07T18:08:53,705   copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-08-07T18:08:53,705   creating build/lib/SigProfilerMatrixGenerator/references/SV
2024-08-07T18:08:53,706   copying SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV
2024-08-07T18:08:53,706   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-08-07T18:08:53,706   copying SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-08-07T18:08:53,707   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,707   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,708   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,709   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,709   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,711   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,712   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,713   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,714   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,714   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,715   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,715   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,717   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,720   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,721   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,721   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,722   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,722   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,722   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,723   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,723   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,724   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,724   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,725   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,726   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,726   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,726   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,727   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,728   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,728   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,729   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,730   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,730   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,731   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,731   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,731   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,732   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,732   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,733   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,733   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,734   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,734   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,735   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,735   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,736   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,737   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,737   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,738   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,738   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,739   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,740   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:53,740   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,740   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,741   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,741   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,742   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,742   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,743   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,743   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,744   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,749   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,760   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,766   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,766   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,767   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,767   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,768   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,768   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,769   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,769   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,770   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,771   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,771   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,772   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,772   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,773   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,773   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,774   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,774   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,775   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,775   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,776   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,776   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,777   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,777   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,778   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,778   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,779   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,779   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,780   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,780   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,781   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,784   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,789   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,796   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,804   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,806   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,807   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,808   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,808   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,809   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,809   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:53,810   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,810   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,811   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,811   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,812   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,812   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,813   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,813   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,814   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,814   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,815   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,816   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,818   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,820   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,827   copying SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:53,830   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes
2024-08-07T18:08:53,830   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,832   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,836   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,840   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,842   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,844   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,847   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,850   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,852   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,860   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,866   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,869   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,871   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,874   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,876   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,879   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,882   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,884   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,889   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,893   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,895   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,898   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,901   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,904   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,906   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,913   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,919   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,921   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,924   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,927   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,929   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,932   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,935   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,937   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,941   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,946   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,948   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,950   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,953   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,956   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,959   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,967   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,974   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,976   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,979   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,982   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,984   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,987   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,989   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,992   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:53,996   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,000   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,003   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,005   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,008   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,010   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,012   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,018   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,024   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,027   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,029   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,031   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,033   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,035   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,037   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,039   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,043   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,046   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,048   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,050   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,053   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,055   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,057   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,063   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,071   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,072   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,075   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,077   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,080   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,083   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,085   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,087   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,089   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,094   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,097   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,099   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,101   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,106   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,110   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,116   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,123   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,125   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,127   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,129   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,131   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,134   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,137   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,140   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,144   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,159   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,170   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,195   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,214   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,216   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,218   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,220   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,222   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,224   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,227   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,230   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,232   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,235   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,238   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,240   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,243   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,245   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,247   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,250   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,252   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,255   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,259   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,266   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,272   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,280   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,282   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,285   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,287   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,289   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,293   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,296   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,300   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,304   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,316   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,328   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,345   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,369   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,371   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,373   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,375   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,377   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,380   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,383   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,386   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,388   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,391   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,394   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,396   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,399   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,401   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,403   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,406   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,408   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,413   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,418   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,423   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,430   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,432   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,435   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,437   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,440   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,444   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,447   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,451   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,455   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,469   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,479   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,495   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,510   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,512   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,514   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,516   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,519   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,522   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,525   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,528   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,530   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,533   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,536   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,538   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,540   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,542   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,545   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,547   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,552   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,556   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,564   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,571   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,576   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,578   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,580   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,583   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,587   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,590   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,593   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,603   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,612   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,634   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,651   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,653   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,655   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,658   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,659   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,662   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,665   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,667   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,670   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,673   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,676   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,679   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,682   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,684   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,686   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,689   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,691   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,696   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,700   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,705   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,709   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,711   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,714   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,716   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,719   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,722   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,725   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,729   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,733   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,750   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,764   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,780   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,795   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,798   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,800   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,803   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,805   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,808   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,812   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,815   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,818   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,822   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,828   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,831   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,834   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,837   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,850   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,852   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,855   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,858   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:54,860   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-08-07T18:08:54,861   copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-08-07T18:08:54,863   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-08-07T18:08:54,864   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-08-07T18:08:55,116   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-08-07T18:08:55,117   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-08-07T18:08:55,189   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-08-07T18:08:55,190   copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-08-07T18:08:55,376   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-08-07T18:08:55,377   copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-08-07T18:08:55,449   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:08:55,450   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:08:55,452   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:08:55,455   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:08:55,458   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-08-07T18:08:55,459   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-08-07T18:08:55,530   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-08-07T18:08:55,532   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-08-07T18:08:55,610   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-08-07T18:08:55,611   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-08-07T18:08:55,683   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-08-07T18:08:55,684   copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-08-07T18:08:56,046   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-08-07T18:08:56,047   copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-08-07T18:08:56,053   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-08-07T18:08:56,054   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-08-07T18:08:56,056   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,057   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,063   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,071   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,079   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,083   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,089   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,095   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,102   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,111   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,115   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,124   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,136   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,142   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,146   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,152   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,164   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,175   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,183   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,191   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,200   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,209   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,216   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,222   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,224   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,230   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:56,232   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,233   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,239   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,249   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,258   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,262   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,267   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,273   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,282   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,293   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,299   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,311   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,326   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,331   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,335   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,341   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,350   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,358   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,363   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,371   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,378   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,391   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,397   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,399   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,405   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:56,407   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,408   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,416   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,427   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,437   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,446   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,448   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,459   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:56,469   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,470   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,474   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,478   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,482   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,486   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,490   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,494   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,497   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,502   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,505   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,508   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,513   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,517   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,521   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,524   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,527   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,531   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,534   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,538   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,542   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,546   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,549   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,553   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,557   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,560   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,563   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,566   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,570   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,573   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,576   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,579   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,582   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,586   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,590   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,595   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,599   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,603   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,607   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,613   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:56,617   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-08-07T18:08:56,618   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-08-07T18:08:56,621   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,623   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,629   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,637   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,641   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,647   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,652   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,657   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,662   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,668   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,672   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,676   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,683   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,691   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,697   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,704   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,711   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,718   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,728   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,734   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,741   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,743   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,748   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:56,751   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,752   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,759   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,766   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,771   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,778   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,783   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,788   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,793   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,799   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,804   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,809   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,815   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,824   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,830   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,837   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,843   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,850   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,863   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,870   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,878   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,884   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:56,887   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,888   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,896   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,913   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,919   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,926   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,934   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,942   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,952   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,966   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,974   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,983   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:56,997   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,015   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,025   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,039   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,049   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,058   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,070   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,076   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,085   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,087   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,095   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:57,097   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,098   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,104   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,108   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,113   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,117   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,122   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,126   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,130   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,134   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,137   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,141   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,149   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,153   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,158   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,163   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,168   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,174   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,178   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,184   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,189   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,193   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,195   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,199   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:57,200   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,201   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,210   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,214   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,219   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,224   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,230   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,234   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,239   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,244   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,248   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,252   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,263   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,267   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,274   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,282   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,292   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,299   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,304   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,313   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,319   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,325   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,327   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,333   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:57,335   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,336   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,339   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,342   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,346   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,348   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,351   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,353   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,356   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,360   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,362   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,365   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,368   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,372   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,375   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,378   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,381   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:57,387   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-08-07T18:08:57,388   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-08-07T18:08:57,390   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,391   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,394   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,398   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,401   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,404   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,407   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,410   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,414   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,417   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,420   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,424   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,427   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,430   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,433   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,436   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,439   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,442   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,446   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,449   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,452   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,455   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,458   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,461   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,464   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:08:57,466   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,467   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,470   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,474   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,477   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,480   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,483   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,486   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,490   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,493   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,496   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,499   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,503   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,506   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,509   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,511   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,515   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,518   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,521   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,524   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,528   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,531   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,534   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,537   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,540   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:08:57,542   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,543   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,548   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,552   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,558   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,563   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,565   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,570   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:08:57,574   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,575   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,578   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,581   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,584   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,587   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,590   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,593   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,596   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,599   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,602   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,604   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,608   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,611   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,614   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,617   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,620   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,623   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,626   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,629   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,632   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,635   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,637   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,640   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,643   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,645   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,648   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,651   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,653   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,656   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,659   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,663   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,666   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,669   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,672   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,675   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,679   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,682   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,685   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,688   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:08:57,691   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,692   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,696   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,700   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,703   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,706   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,710   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,714   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,717   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,720   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,723   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,726   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,730   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,734   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,737   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,741   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,744   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,748   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,752   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,757   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,761   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,766   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:08:57,769   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,771   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,775   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,781   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,785   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,796   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,800   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,805   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,810   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,815   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,819   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,824   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,830   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,837   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,842   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,848   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,853   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,857   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,861   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,865   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,870   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,873   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:08:57,876   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,878   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,882   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,887   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,890   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,894   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,898   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,902   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,905   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,908   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,911   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,914   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,918   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,922   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,926   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,930   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,934   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,937   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,942   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,946   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,949   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,952   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:08:57,955   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,956   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,960   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,963   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,966   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,969   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,972   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,975   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,978   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,981   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,985   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,988   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,992   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,995   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:57,999   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,004   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,008   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,012   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,016   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,019   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,023   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,026   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,028   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,031   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:08:58,033   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,035   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,039   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,042   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,046   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,049   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,052   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,056   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,060   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,063   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,066   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,069   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,074   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,077   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,082   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,086   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,090   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,094   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,098   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,102   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,106   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,110   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,112   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,115   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:08:58,117   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,118   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,121   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,124   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,127   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,130   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,132   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,135   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,138   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,140   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,143   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,146   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,149   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,152   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,155   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,158   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,161   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:08:58,163   creating build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,164   copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,168   copying SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,174   copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,178   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,182   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,184   copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,186   copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,189   copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,192   copying SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,195   copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,198   copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,200   copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,203   copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,206   copying SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-08-07T18:08:58,208   creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,209   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,214   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,216   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,220   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,222   copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,224   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,228   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,230   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,235   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:08:58,265   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-08-07T18:08:58,266   !!

2024-08-07T18:08:58,267           ********************************************************************************
2024-08-07T18:08:58,268           Please avoid running ``setup.py`` directly.
2024-08-07T18:08:58,268           Instead, use pypa/build, pypa/installer or other
2024-08-07T18:08:58,269           standards-based tools.

2024-08-07T18:08:58,270           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-08-07T18:08:58,271           ********************************************************************************

2024-08-07T18:08:58,272   !!
2024-08-07T18:08:58,272     self.initialize_options()
2024-08-07T18:08:58,294   installing to build/bdist.linux-armv7l/wheel
2024-08-07T18:08:58,295   running install
2024-08-07T18:08:58,319   running install_lib
2024-08-07T18:08:58,346   creating build/bdist.linux-armv7l
2024-08-07T18:08:58,346   creating build/bdist.linux-armv7l/wheel
2024-08-07T18:08:58,348   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-08-07T18:08:58,349   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:58,351   copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:58,352   copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-08-07T18:08:58,355   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references
2024-08-07T18:08:58,357   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-08-07T18:08:58,357   copying build/lib/SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-08-07T18:08:58,360   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-08-07T18:08:58,361   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-08-07T18:08:58,365   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,365   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,368   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,369   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,371   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,373   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,375   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,377   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,380   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,382   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,384   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,387   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,390   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,391   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,395   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,397   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,400   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,402   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,404   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,406   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,408   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,410   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,411   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,413   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,415   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,418   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,420   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,422   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,424   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,426   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,429   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,431   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,432   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,434   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,437   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,439   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,442   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,444   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,447   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,450   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,453   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,455   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,457   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,459   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,462   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,464   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,466   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,468   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,471   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,472   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,474   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-08-07T18:08:58,477   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,478   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,481   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,483   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,486   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,487   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,489   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,491   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,494   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,496   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,498   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,500   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,502   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,503   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,506   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,508   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,510   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,512   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,514   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,517   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,519   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,521   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,524   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,526   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,528   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,531   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,533   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,535   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,538   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,539   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,541   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,544   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,546   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,548   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,550   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,553   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,555   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,558   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,559   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,561   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,563   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,565   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,567   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,569   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,571   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,573   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,575   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,578   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,580   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,582   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,584   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-08-07T18:08:58,587   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,588   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,590   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,591   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,618   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,621   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,627   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,629   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,631   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,637   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,639   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,672   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,674   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,676   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,679   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/VCF
2024-08-07T18:08:58,681   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes
2024-08-07T18:08:58,683   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-08-07T18:08:58,685   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,702   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,711   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,716   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,724   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,736   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,747   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,753   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,756   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,761   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,770   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,776   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,786   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,791   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,797   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,810   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,815   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-08-07T18:08:58,819   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,820   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,830   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,836   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,849   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,856   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,882   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,887   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,894   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,904   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,909   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,920   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,922   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,929   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,936   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,946   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,952   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,957   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,970   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,978   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-08-07T18:08:58,984   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:58,986   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:58,994   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,001   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,013   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,027   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,045   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,052   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,056   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,062   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,073   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,076   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,086   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,094   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,096   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,101   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,112   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,116   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,124   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,130   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,139   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,145   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,150   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,159   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-08-07T18:08:59,164   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,165   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,172   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,184   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,195   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,198   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,206   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,215   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,220   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,225   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,226   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,231   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,237   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,246   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,257   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,289   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-08-07T18:08:59,303   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,304   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,312   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,315   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,319   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,327   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,330   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,334   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,340   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,344   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,346   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,350   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,353   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,361   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-08-07T18:08:59,365   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,366   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,375   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,381   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,392   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,395   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,404   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,408   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,413   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,416   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,422   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,428   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,431   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,436   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,440   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,443   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,447   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,451   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,455   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,458   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-08-07T18:08:59,463   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,476   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,484   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,491   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,504   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,515   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,520   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,526   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,533   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,542   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,550   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,556   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,560   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,565   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-08-07T18:08:59,588   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-08-07T18:08:59,589   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-08-07T18:08:59,592   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,593   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,603   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,619   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,629   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,631   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,640   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-08-07T18:08:59,653   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,654   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,658   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,661   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,664   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,678   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,688   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,691   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,698   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,701   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,704   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,708   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,712   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,716   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,722   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,726   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,728   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,731   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,737   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,743   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,749   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,756   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,759   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,767   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,770   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,773   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,777   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,782   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-08-07T18:08:59,788   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-08-07T18:08:59,790   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,791   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,797   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,803   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,811   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,822   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,830   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,841   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,845   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,851   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,861   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,869   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,876   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,878   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,883   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,891   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,896   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,903   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,919   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,925   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,930   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,934   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,939   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-08-07T18:08:59,948   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,949   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,951   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,953   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,955   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,958   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,960   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,969   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,971   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,976   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,978   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,982   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,984   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,986   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,988   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,991   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,992   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,994   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:08:59,997   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,000   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,012   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,014   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,025   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,030   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,032   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,034   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,036   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,040   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,042   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,044   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,062   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,087   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,089   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,091   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,095   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,098   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,106   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,111   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,131   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,159   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,170   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,172   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,175   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,185   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,190   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,192   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,195   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,207   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,213   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,229   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,231   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,240   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,244   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,272   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,275   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,280   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,286   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,295   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,297   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,302   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,305   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,310   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,312   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,315   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,324   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,334   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,340   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,347   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,352   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,355   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,361   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,364   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,387   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,389   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,395   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,397   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,403   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,408   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,410   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,412   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,415   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,420   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,424   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,432   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,434   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,435   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,439   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,446   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,450   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,452   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,454   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,457   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,460   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,466   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,468   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,487   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,489   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,501   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,503   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,507   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,514   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,516   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,521   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,524   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,536   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,541   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,543   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,552   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,557   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,561   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,586   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,588   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,591   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,609   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,613   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,620   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,622   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,624   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,630   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,632   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,637   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,639   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,642   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,644   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,647   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,649   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,651   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,653   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,656   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,661   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,665   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,670   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,671   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,680   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,682   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,686   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,691   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,698   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,700   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,703   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,705   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,707   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,709   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,725   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,727   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,733   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,749   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,754   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,758   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,760   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,765   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,767   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,769   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,771   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,774   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,776   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,782   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,784   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,787   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,790   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,792   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,796   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,798   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,800   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,804   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,818   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,820   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,824   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,827   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,829   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,834   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,851   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,853   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,855   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,857   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,862   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,864   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,872   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,877   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,879   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,882   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,884   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,888   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,891   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,894   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,897   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-08-07T18:09:00,900   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-08-07T18:09:00,902   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,904   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,908   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,912   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,916   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,919   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,923   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,927   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,932   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,936   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,940   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,943   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,947   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,951   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,955   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,959   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,962   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,967   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,971   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,975   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,978   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,982   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-08-07T18:09:00,987   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:00,988   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:00,992   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:00,994   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:00,998   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,002   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,005   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,009   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,014   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,018   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,021   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,024   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,028   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,031   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,034   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,042   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,045   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,049   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,053   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,057   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,061   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-08-07T18:09:01,066   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,067   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,071   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,073   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,076   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,080   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,084   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,087   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,094   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,097   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,101   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,104   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,111   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,118   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,121   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,124   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,127   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,131   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,134   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,138   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,141   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,144   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-08-07T18:09:01,148   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,150   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,156   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,160   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,162   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,173   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,178   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,186   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,190   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,193   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,196   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,200   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,203   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,206   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,213   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,218   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,222   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,226   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,229   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-08-07T18:09:01,238   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,253   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,259   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,270   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,273   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,276   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,279   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,282   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-08-07T18:09:01,286   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,287   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,290   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,292   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,295   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,300   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,304   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,335   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,341   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-08-07T18:09:01,358   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,359   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,365   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,368   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,374   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,378   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,388   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,391   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,394   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,399   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,402   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,406   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,408   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,412   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,415   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,421   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-08-07T18:09:01,425   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,431   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,435   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,439   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,444   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,449   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,453   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-08-07T18:09:01,456   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,457   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,460   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,465   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,468   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,470   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,472   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,476   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,479   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,481   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,484   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,487   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,489   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,492   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,494   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,497   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,499   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,501   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,504   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,506   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,511   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,514   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,519   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,522   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,525   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,527   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,530   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,533   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,536   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,538   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,544   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,546   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,549   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,551   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,554   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,556   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-08-07T18:09:01,559   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-08-07T18:09:01,561   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,566   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,568   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,571   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,578   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,587   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,590   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,593   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,599   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,602   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,604   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,608   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,610   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,613   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,616   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,620   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,630   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-08-07T18:09:01,637   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-08-07T18:09:01,639   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-08-07T18:09:01,640   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-08-07T18:09:01,719   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-08-07T18:09:01,720   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-08-07T18:09:01,798   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-08-07T18:09:01,799   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-08-07T18:09:01,876   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-08-07T18:09:01,877   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-08-07T18:09:01,883   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-08-07T18:09:01,885   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-08-07T18:09:02,455   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-08-07T18:09:02,456   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-08-07T18:09:02,523   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:09:02,524   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:09:02,527   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:09:02,531   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-08-07T18:09:02,533   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-08-07T18:09:02,535   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-08-07T18:09:02,874   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-08-07T18:09:02,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-08-07T18:09:02,939   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-08-07T18:09:02,941   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-08-07T18:09:02,943   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-08-07T18:09:04,760   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:09:04,762   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-08-07T18:09:04,763   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-08-07T18:09:04,766   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:09:04,768   copying build/lib/SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:09:04,772   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:09:04,774   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:09:04,783   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-08-07T18:09:04,797   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-08-07T18:09:04,799   copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-08-07T18:09:04,802   copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-08-07T18:09:04,804   copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-08-07T18:09:04,807   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,808   copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,811   copying build/lib/SigProfilerMatrixGenerator/scripts/vcfToBedpe.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,814   copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,816   copying build/lib/SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,821   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,825   copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,827   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,830   copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,833   copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,836   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,839   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,841   copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,844   copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,846   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,848   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,852   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,854   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,856   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,860   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,864   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,866   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,868   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,870   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-08-07T18:09:04,874   copying build/lib/SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-08-07T18:09:04,877   copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-08-07T18:09:04,879   running install_egg_info
2024-08-07T18:09:04,914   Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.28-py3.11.egg-info
2024-08-07T18:09:04,930   running install_scripts
2024-08-07T18:09:04,950   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.28.dist-info/WHEEL
2024-08-07T18:09:04,954   creating '/tmp/pip-wheel-z22dpmcw/SigProfilerMatrixGenerator-1.2.28-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-08-07T18:09:04,956   adding 'SigProfilerMatrixGenerator/__init__.py'
2024-08-07T18:09:04,959   adding 'SigProfilerMatrixGenerator/install.py'
2024-08-07T18:09:04,961   adding 'SigProfilerMatrixGenerator/test_helpers.py'
2024-08-07T18:09:04,962   adding 'SigProfilerMatrixGenerator/version.py'
2024-08-07T18:09:04,964   adding 'SigProfilerMatrixGenerator/controllers/__init__.py'
2024-08-07T18:09:04,966   adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py'
2024-08-07T18:09:04,969   adding 'SigProfilerMatrixGenerator/references/CNV/.DS_Store'
2024-08-07T18:09:04,970   adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv'
2024-08-07T18:09:04,972   adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt'
2024-08-07T18:09:05,103   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv'
2024-08-07T18:09:05,173   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv'
2024-08-07T18:09:05,179   adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv'
2024-08-07T18:09:05,181   adding 'SigProfilerMatrixGenerator/references/SV/.DS_Store'
2024-08-07T18:09:05,183   adding 'SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store'
2024-08-07T18:09:05,189   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,191   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,193   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,194   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,196   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,198   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,199   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,202   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,204   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,208   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,210   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,213   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,216   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,218   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,220   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,222   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,223   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,224   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,226   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,228   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,230   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,232   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,234   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,236   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,238   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,240   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,245   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,247   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,251   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,252   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,254   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,256   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,259   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,261   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,263   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,267   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,269   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,272   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,276   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,278   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,283   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,285   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,289   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,291   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,293   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,295   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,296   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,298   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,299   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,301   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv'
2024-08-07T18:09:05,304   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv'
2024-08-07T18:09:05,306   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv'
2024-08-07T18:09:05,308   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv'
2024-08-07T18:09:05,310   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv'
2024-08-07T18:09:05,311   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv'
2024-08-07T18:09:05,312   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv'
2024-08-07T18:09:05,314   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv'
2024-08-07T18:09:05,315   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv'
2024-08-07T18:09:05,317   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv'
2024-08-07T18:09:05,319   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv'
2024-08-07T18:09:05,320   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv'
2024-08-07T18:09:05,323   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv'
2024-08-07T18:09:05,326   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv'
2024-08-07T18:09:05,328   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv'
2024-08-07T18:09:05,331   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv'
2024-08-07T18:09:05,334   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv'
2024-08-07T18:09:05,336   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv'
2024-08-07T18:09:05,339   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv'
2024-08-07T18:09:05,340   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv'
2024-08-07T18:09:05,343   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv'
2024-08-07T18:09:05,345   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv'
2024-08-07T18:09:05,347   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv'
2024-08-07T18:09:05,348   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv'
2024-08-07T18:09:05,350   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv'
2024-08-07T18:09:05,353   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv'
2024-08-07T18:09:05,356   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv'
2024-08-07T18:09:05,360   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv'
2024-08-07T18:09:05,364   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv'
2024-08-07T18:09:05,366   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv'
2024-08-07T18:09:05,367   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv'
2024-08-07T18:09:05,369   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv'
2024-08-07T18:09:05,370   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv'
2024-08-07T18:09:05,372   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv'
2024-08-07T18:09:05,374   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv'
2024-08-07T18:09:05,376   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv'
2024-08-07T18:09:05,379   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv'
2024-08-07T18:09:05,380   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv'
2024-08-07T18:09:05,389   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv'
2024-08-07T18:09:05,391   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv'
2024-08-07T18:09:05,392   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv'
2024-08-07T18:09:05,394   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv'
2024-08-07T18:09:05,396   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv'
2024-08-07T18:09:05,398   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv'
2024-08-07T18:09:05,399   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv'
2024-08-07T18:09:05,400   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv'
2024-08-07T18:09:05,401   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv'
2024-08-07T18:09:05,403   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv'
2024-08-07T18:09:05,406   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv'
2024-08-07T18:09:05,407   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv'
2024-08-07T18:09:05,408   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv'
2024-08-07T18:09:05,431   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.bedpe.tsv'
2024-08-07T18:09:05,458   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/COLO829v003T.purple.sv.vcf'
2024-08-07T18:09:05,461   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe'
2024-08-07T18:09:05,462   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.bedpe.tsv'
2024-08-07T18:09:05,464   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/delly.vcf'
2024-08-07T18:09:05,465   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe'
2024-08-07T18:09:05,612   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.bedpe.tsv'
2024-08-07T18:09:05,781   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/gnomad.vcf'
2024-08-07T18:09:05,795   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe'
2024-08-07T18:09:05,796   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.bedpe.tsv'
2024-08-07T18:09:05,798   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/lumpy.vcf'
2024-08-07T18:09:05,799   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe'
2024-08-07T18:09:05,800   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.bedpe.tsv'
2024-08-07T18:09:05,802   adding 'SigProfilerMatrixGenerator/references/SV/example_input/VCF/manta.vcf'
2024-08-07T18:09:05,833   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv'
2024-08-07T18:09:05,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv'
2024-08-07T18:09:05,858   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv'
2024-08-07T18:09:05,859   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv'
2024-08-07T18:09:05,863   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv'
2024-08-07T18:09:05,867   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv'
2024-08-07T18:09:05,868   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv'
2024-08-07T18:09:05,974   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv'
2024-08-07T18:09:06,077   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv'
2024-08-07T18:09:06,079   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv'
2024-08-07T18:09:06,081   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv'
2024-08-07T18:09:06,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv'
2024-08-07T18:09:06,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv'
2024-08-07T18:09:06,085   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv'
2024-08-07T18:09:06,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv'
2024-08-07T18:09:06,087   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv'
2024-08-07T18:09:06,113   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv'
2024-08-07T18:09:06,135   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv'
2024-08-07T18:09:06,137   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv'
2024-08-07T18:09:06,138   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv'
2024-08-07T18:09:06,142   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv'
2024-08-07T18:09:06,146   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv'
2024-08-07T18:09:06,147   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv'
2024-08-07T18:09:06,251   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv'
2024-08-07T18:09:06,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv'
2024-08-07T18:09:06,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv'
2024-08-07T18:09:06,361   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv'
2024-08-07T18:09:06,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv'
2024-08-07T18:09:06,364   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv'
2024-08-07T18:09:06,365   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv'
2024-08-07T18:09:06,366   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv'
2024-08-07T18:09:06,368   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv'
2024-08-07T18:09:06,391   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv'
2024-08-07T18:09:06,409   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv'
2024-08-07T18:09:06,411   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv'
2024-08-07T18:09:06,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv'
2024-08-07T18:09:06,416   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv'
2024-08-07T18:09:06,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv'
2024-08-07T18:09:06,421   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv'
2024-08-07T18:09:06,510   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv'
2024-08-07T18:09:06,599   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv'
2024-08-07T18:09:06,602   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv'
2024-08-07T18:09:06,603   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv'
2024-08-07T18:09:06,605   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv'
2024-08-07T18:09:06,606   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv'
2024-08-07T18:09:06,607   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv'
2024-08-07T18:09:06,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv'
2024-08-07T18:09:06,610   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv'
2024-08-07T18:09:06,632   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv'
2024-08-07T18:09:06,651   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv'
2024-08-07T18:09:06,653   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv'
2024-08-07T18:09:06,654   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv'
2024-08-07T18:09:06,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv'
2024-08-07T18:09:06,660   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv'
2024-08-07T18:09:06,662   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv'
2024-08-07T18:09:06,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv'
2024-08-07T18:09:06,841   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv'
2024-08-07T18:09:06,843   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv'
2024-08-07T18:09:06,845   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv'
2024-08-07T18:09:06,846   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv'
2024-08-07T18:09:06,847   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv'
2024-08-07T18:09:06,849   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv'
2024-08-07T18:09:06,850   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv'
2024-08-07T18:09:06,852   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv'
2024-08-07T18:09:06,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv'
2024-08-07T18:09:06,895   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv'
2024-08-07T18:09:06,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv'
2024-08-07T18:09:06,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv'
2024-08-07T18:09:06,901   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv'
2024-08-07T18:09:06,905   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv'
2024-08-07T18:09:06,906   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv'
2024-08-07T18:09:07,002   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv'
2024-08-07T18:09:07,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv'
2024-08-07T18:09:07,098   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv'
2024-08-07T18:09:07,099   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv'
2024-08-07T18:09:07,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv'
2024-08-07T18:09:07,113   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv'
2024-08-07T18:09:07,115   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv'
2024-08-07T18:09:07,116   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv'
2024-08-07T18:09:07,119   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv'
2024-08-07T18:09:07,120   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv'
2024-08-07T18:09:07,182   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv'
2024-08-07T18:09:07,184   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv'
2024-08-07T18:09:07,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv'
2024-08-07T18:09:07,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv'
2024-08-07T18:09:07,222   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv'
2024-08-07T18:09:07,259   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv'
2024-08-07T18:09:07,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv'
2024-08-07T18:09:07,391   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv'
2024-08-07T18:09:07,394   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv'
2024-08-07T18:09:07,395   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv'
2024-08-07T18:09:07,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv'
2024-08-07T18:09:07,399   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv'
2024-08-07T18:09:07,406   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv'
2024-08-07T18:09:07,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv'
2024-08-07T18:09:07,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv'
2024-08-07T18:09:07,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv'
2024-08-07T18:09:07,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv'
2024-08-07T18:09:07,738   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv'
2024-08-07T18:09:08,009   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv'
2024-08-07T18:09:08,261   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv'
2024-08-07T18:09:08,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv'
2024-08-07T18:09:08,270   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv'
2024-08-07T18:09:08,271   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv'
2024-08-07T18:09:08,272   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv'
2024-08-07T18:09:08,275   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv'
2024-08-07T18:09:08,277   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv'
2024-08-07T18:09:08,280   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv'
2024-08-07T18:09:08,283   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv'
2024-08-07T18:09:08,286   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv'
2024-08-07T18:09:08,288   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv'
2024-08-07T18:09:08,290   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv'
2024-08-07T18:09:08,293   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv'
2024-08-07T18:09:08,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv'
2024-08-07T18:09:08,296   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv'
2024-08-07T18:09:08,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv'
2024-08-07T18:09:08,300   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv'
2024-08-07T18:09:08,301   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv'
2024-08-07T18:09:08,337   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv'
2024-08-07T18:09:08,405   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv'
2024-08-07T18:09:08,471   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv'
2024-08-07T18:09:08,537   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv'
2024-08-07T18:09:08,540   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv'
2024-08-07T18:09:08,541   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv'
2024-08-07T18:09:08,543   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv'
2024-08-07T18:09:08,545   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv'
2024-08-07T18:09:08,553   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv'
2024-08-07T18:09:08,568   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv'
2024-08-07T18:09:08,583   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv'
2024-08-07T18:09:08,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv'
2024-08-07T18:09:08,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv'
2024-08-07T18:09:08,887   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv'
2024-08-07T18:09:09,155   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv'
2024-08-07T18:09:09,410   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv'
2024-08-07T18:09:09,418   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv'
2024-08-07T18:09:09,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv'
2024-08-07T18:09:09,420   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv'
2024-08-07T18:09:09,422   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv'
2024-08-07T18:09:09,424   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv'
2024-08-07T18:09:09,427   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv'
2024-08-07T18:09:09,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv'
2024-08-07T18:09:09,433   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv'
2024-08-07T18:09:09,436   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv'
2024-08-07T18:09:09,439   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv'
2024-08-07T18:09:09,441   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv'
2024-08-07T18:09:09,444   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv'
2024-08-07T18:09:09,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv'
2024-08-07T18:09:09,447   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv'
2024-08-07T18:09:09,448   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv'
2024-08-07T18:09:09,450   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv'
2024-08-07T18:09:09,481   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv'
2024-08-07T18:09:09,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv'
2024-08-07T18:09:09,568   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv'
2024-08-07T18:09:09,625   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv'
2024-08-07T18:09:09,628   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv'
2024-08-07T18:09:09,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv'
2024-08-07T18:09:09,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv'
2024-08-07T18:09:09,632   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv'
2024-08-07T18:09:09,639   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv'
2024-08-07T18:09:09,646   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv'
2024-08-07T18:09:09,658   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv'
2024-08-07T18:09:09,665   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv'
2024-08-07T18:09:09,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv'
2024-08-07T18:09:09,920   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv'
2024-08-07T18:09:10,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv'
2024-08-07T18:09:10,375   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv'
2024-08-07T18:09:10,382   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv'
2024-08-07T18:09:10,384   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv'
2024-08-07T18:09:10,385   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv'
2024-08-07T18:09:10,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv'
2024-08-07T18:09:10,389   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv'
2024-08-07T18:09:10,392   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv'
2024-08-07T18:09:10,395   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv'
2024-08-07T18:09:10,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv'
2024-08-07T18:09:10,399   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv'
2024-08-07T18:09:10,401   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv'
2024-08-07T18:09:10,403   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv'
2024-08-07T18:09:10,405   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv'
2024-08-07T18:09:10,406   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv'
2024-08-07T18:09:10,408   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv'
2024-08-07T18:09:10,409   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv'
2024-08-07T18:09:10,440   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv'
2024-08-07T18:09:10,470   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv'
2024-08-07T18:09:10,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv'
2024-08-07T18:09:10,584   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv'
2024-08-07T18:09:10,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv'
2024-08-07T18:09:10,588   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv'
2024-08-07T18:09:10,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv'
2024-08-07T18:09:10,591   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv'
2024-08-07T18:09:10,598   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv'
2024-08-07T18:09:10,605   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv'
2024-08-07T18:09:10,617   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv'
2024-08-07T18:09:10,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv'
2024-08-07T18:09:10,752   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv'
2024-08-07T18:09:10,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv'
2024-08-07T18:09:11,111   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv'
2024-08-07T18:09:11,333   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv'
2024-08-07T18:09:11,340   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv'
2024-08-07T18:09:11,341   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv'
2024-08-07T18:09:11,342   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv'
2024-08-07T18:09:11,343   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv'
2024-08-07T18:09:11,345   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv'
2024-08-07T18:09:11,347   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv'
2024-08-07T18:09:11,350   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv'
2024-08-07T18:09:11,353   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv'
2024-08-07T18:09:11,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv'
2024-08-07T18:09:11,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv'
2024-08-07T18:09:11,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv'
2024-08-07T18:09:11,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv'
2024-08-07T18:09:11,363   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv'
2024-08-07T18:09:11,365   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv'
2024-08-07T18:09:11,366   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv'
2024-08-07T18:09:11,368   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv'
2024-08-07T18:09:11,399   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv'
2024-08-07T18:09:11,432   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv'
2024-08-07T18:09:11,465   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv'
2024-08-07T18:09:11,499   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv'
2024-08-07T18:09:11,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv'
2024-08-07T18:09:11,502   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv'
2024-08-07T18:09:11,504   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv'
2024-08-07T18:09:11,505   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv'
2024-08-07T18:09:11,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv'
2024-08-07T18:09:11,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv'
2024-08-07T18:09:11,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv'
2024-08-07T18:09:11,535   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv'
2024-08-07T18:09:11,664   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv'
2024-08-07T18:09:11,802   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv'
2024-08-07T18:09:11,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv'
2024-08-07T18:09:12,087   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv'
2024-08-07T18:09:12,092   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv'
2024-08-07T18:09:12,093   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv'
2024-08-07T18:09:12,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv'
2024-08-07T18:09:12,096   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv'
2024-08-07T18:09:12,098   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv'
2024-08-07T18:09:12,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv'
2024-08-07T18:09:12,103   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv'
2024-08-07T18:09:12,106   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv'
2024-08-07T18:09:12,113   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt'
2024-08-07T18:09:12,159   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv'
2024-08-07T18:09:12,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv'
2024-08-07T18:09:12,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv'
2024-08-07T18:09:12,178   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv'
2024-08-07T18:09:12,345   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv'
2024-08-07T18:09:12,351   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv'
2024-08-07T18:09:12,353   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv'
2024-08-07T18:09:12,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv'
2024-08-07T18:09:12,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv'
2024-08-07T18:09:12,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py'
2024-08-07T18:09:15,115   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list'
2024-08-07T18:09:16,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list'
2024-08-07T18:09:17,473   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list'
2024-08-07T18:09:18,372   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list'
2024-08-07T18:09:18,402   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list'
2024-08-07T18:09:18,404   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt'
2024-08-07T18:09:18,407   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv'
2024-08-07T18:09:19,287   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list'
2024-08-07T18:09:20,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list'
2024-08-07T18:09:21,104   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list'
2024-08-07T18:09:23,438   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list'
2024-08-07T18:09:23,636   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list'
2024-08-07T18:09:23,640   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py'
2024-08-07T18:09:23,662   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt'
2024-08-07T18:09:23,705   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt'
2024-08-07T18:09:23,747   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt'
2024-08-07T18:09:23,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt'
2024-08-07T18:09:23,782   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt'
2024-08-07T18:09:23,804   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt'
2024-08-07T18:09:23,835   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt'
2024-08-07T18:09:23,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt'
2024-08-07T18:09:23,892   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt'
2024-08-07T18:09:23,942   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt'
2024-08-07T18:09:24,005   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt'
2024-08-07T18:09:24,025   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt'
2024-08-07T18:09:24,033   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt'
2024-08-07T18:09:24,048   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt'
2024-08-07T18:09:24,093   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt'
2024-08-07T18:09:24,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt'
2024-08-07T18:09:24,161   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt'
2024-08-07T18:09:24,190   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt'
2024-08-07T18:09:24,222   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt'
2024-08-07T18:09:24,253   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt'
2024-08-07T18:09:24,278   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt'
2024-08-07T18:09:24,302   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt'
2024-08-07T18:09:24,305   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt'
2024-08-07T18:09:24,327   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt'
2024-08-07T18:09:24,330   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt'
2024-08-07T18:09:24,353   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt'
2024-08-07T18:09:24,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt'
2024-08-07T18:09:24,438   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt'
2024-08-07T18:09:24,450   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt'
2024-08-07T18:09:24,474   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt'
2024-08-07T18:09:24,496   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt'
2024-08-07T18:09:24,528   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt'
2024-08-07T18:09:24,571   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt'
2024-08-07T18:09:24,584   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt'
2024-08-07T18:09:24,635   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt'
2024-08-07T18:09:24,697   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt'
2024-08-07T18:09:24,716   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt'
2024-08-07T18:09:24,724   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt'
2024-08-07T18:09:24,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt'
2024-08-07T18:09:24,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt'
2024-08-07T18:09:24,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt'
2024-08-07T18:09:24,853   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt'
2024-08-07T18:09:24,884   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt'
2024-08-07T18:09:24,916   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt'
2024-08-07T18:09:24,948   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt'
2024-08-07T18:09:24,974   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt'
2024-08-07T18:09:24,998   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt'
2024-08-07T18:09:25,001   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt'
2024-08-07T18:09:25,024   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt'
2024-08-07T18:09:25,028   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt'
2024-08-07T18:09:25,062   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt'
2024-08-07T18:09:25,105   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt'
2024-08-07T18:09:25,151   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt'
2024-08-07T18:09:25,190   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt'
2024-08-07T18:09:25,194   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt'
2024-08-07T18:09:25,252   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt'
2024-08-07T18:09:25,289   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt'
2024-08-07T18:09:25,300   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt'
2024-08-07T18:09:25,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt'
2024-08-07T18:09:25,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt'
2024-08-07T18:09:25,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt'
2024-08-07T18:09:25,322   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt'
2024-08-07T18:09:25,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt'
2024-08-07T18:09:25,333   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt'
2024-08-07T18:09:25,340   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt'
2024-08-07T18:09:25,349   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt'
2024-08-07T18:09:25,352   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt'
2024-08-07T18:09:25,366   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt'
2024-08-07T18:09:25,377   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt'
2024-08-07T18:09:25,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt'
2024-08-07T18:09:25,386   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt'
2024-08-07T18:09:25,390   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt'
2024-08-07T18:09:25,396   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt'
2024-08-07T18:09:25,401   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt'
2024-08-07T18:09:25,406   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt'
2024-08-07T18:09:25,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt'
2024-08-07T18:09:25,417   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt'
2024-08-07T18:09:25,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt'
2024-08-07T18:09:25,427   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt'
2024-08-07T18:09:25,433   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt'
2024-08-07T18:09:25,436   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt'
2024-08-07T18:09:25,438   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt'
2024-08-07T18:09:25,441   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt'
2024-08-07T18:09:25,444   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt'
2024-08-07T18:09:25,447   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt'
2024-08-07T18:09:25,449   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt'
2024-08-07T18:09:25,452   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt'
2024-08-07T18:09:25,455   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt'
2024-08-07T18:09:25,460   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt'
2024-08-07T18:09:25,466   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt'
2024-08-07T18:09:25,477   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt'
2024-08-07T18:09:25,487   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt'
2024-08-07T18:09:25,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt'
2024-08-07T18:09:25,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt'
2024-08-07T18:09:25,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt'
2024-08-07T18:09:25,523   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt'
2024-08-07T18:09:25,526   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt'
2024-08-07T18:09:25,549   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt'
2024-08-07T18:09:25,585   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt'
2024-08-07T18:09:25,602   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt'
2024-08-07T18:09:25,620   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt'
2024-08-07T18:09:25,639   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt'
2024-08-07T18:09:25,658   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt'
2024-08-07T18:09:25,674   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt'
2024-08-07T18:09:25,697   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt'
2024-08-07T18:09:25,708   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt'
2024-08-07T18:09:25,722   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt'
2024-08-07T18:09:25,750   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt'
2024-08-07T18:09:25,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt'
2024-08-07T18:09:25,818   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt'
2024-08-07T18:09:25,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt'
2024-08-07T18:09:25,880   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt'
2024-08-07T18:09:25,907   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt'
2024-08-07T18:09:25,955   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt'
2024-08-07T18:09:25,980   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt'
2024-08-07T18:09:26,010   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt'
2024-08-07T18:09:26,012   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt'
2024-08-07T18:09:26,031   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt'
2024-08-07T18:09:26,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt'
2024-08-07T18:09:26,058   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt'
2024-08-07T18:09:26,094   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt'
2024-08-07T18:09:26,111   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt'
2024-08-07T18:09:26,129   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt'
2024-08-07T18:09:26,148   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt'
2024-08-07T18:09:26,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt'
2024-08-07T18:09:26,182   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt'
2024-08-07T18:09:26,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt'
2024-08-07T18:09:26,221   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt'
2024-08-07T18:09:26,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt'
2024-08-07T18:09:26,265   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt'
2024-08-07T18:09:26,308   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt'
2024-08-07T18:09:26,334   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt'
2024-08-07T18:09:26,364   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt'
2024-08-07T18:09:26,396   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt'
2024-08-07T18:09:26,424   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt'
2024-08-07T18:09:26,472   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt'
2024-08-07T18:09:26,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt'
2024-08-07T18:09:26,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt'
2024-08-07T18:09:26,547   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt'
2024-08-07T18:09:26,551   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt'
2024-08-07T18:09:26,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt'
2024-08-07T18:09:26,637   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt'
2024-08-07T18:09:26,658   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt'
2024-08-07T18:09:26,678   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt'
2024-08-07T18:09:26,700   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt'
2024-08-07T18:09:26,721   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt'
2024-08-07T18:09:26,743   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt'
2024-08-07T18:09:26,774   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt'
2024-08-07T18:09:26,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt'
2024-08-07T18:09:26,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt'
2024-08-07T18:09:26,841   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt'
2024-08-07T18:09:26,909   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt'
2024-08-07T18:09:26,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt'
2024-08-07T18:09:26,994   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt'
2024-08-07T18:09:27,040   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt'
2024-08-07T18:09:27,077   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt'
2024-08-07T18:09:27,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt'
2024-08-07T18:09:27,165   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt'
2024-08-07T18:09:27,198   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt'
2024-08-07T18:09:27,201   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt'
2024-08-07T18:09:27,226   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt'
2024-08-07T18:09:27,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt'
2024-08-07T18:09:27,250   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt'
2024-08-07T18:09:27,258   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt'
2024-08-07T18:09:27,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt'
2024-08-07T18:09:27,274   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt'
2024-08-07T18:09:27,282   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt'
2024-08-07T18:09:27,291   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt'
2024-08-07T18:09:27,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt'
2024-08-07T18:09:27,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt'
2024-08-07T18:09:27,312   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt'
2024-08-07T18:09:27,319   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt'
2024-08-07T18:09:27,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt'
2024-08-07T18:09:27,364   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt'
2024-08-07T18:09:27,382   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt'
2024-08-07T18:09:27,404   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt'
2024-08-07T18:09:27,422   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt'
2024-08-07T18:09:27,439   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt'
2024-08-07T18:09:27,452   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt'
2024-08-07T18:09:27,468   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt'
2024-08-07T18:09:27,484   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt'
2024-08-07T18:09:27,496   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt'
2024-08-07T18:09:27,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt'
2024-08-07T18:09:27,508   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt'
2024-08-07T18:09:27,510   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt'
2024-08-07T18:09:27,543   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt'
2024-08-07T18:09:27,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt'
2024-08-07T18:09:27,572   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt'
2024-08-07T18:09:27,586   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt'
2024-08-07T18:09:27,602   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt'
2024-08-07T18:09:27,618   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt'
2024-08-07T18:09:27,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt'
2024-08-07T18:09:27,645   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt'
2024-08-07T18:09:27,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt'
2024-08-07T18:09:27,669   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt'
2024-08-07T18:09:27,729   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt'
2024-08-07T18:09:27,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt'
2024-08-07T18:09:27,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt'
2024-08-07T18:09:27,815   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt'
2024-08-07T18:09:27,846   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt'
2024-08-07T18:09:27,876   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt'
2024-08-07T18:09:27,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt'
2024-08-07T18:09:27,927   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt'
2024-08-07T18:09:27,953   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt'
2024-08-07T18:09:27,972   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt'
2024-08-07T18:09:27,974   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt'
2024-08-07T18:09:27,993   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt'
2024-08-07T18:09:27,996   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt'
2024-08-07T18:09:27,998   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt'
2024-08-07T18:09:28,002   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt'
2024-08-07T18:09:28,009   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt'
2024-08-07T18:09:28,011   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt'
2024-08-07T18:09:28,013   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt'
2024-08-07T18:09:28,014   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt'
2024-08-07T18:09:28,017   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt'
2024-08-07T18:09:28,021   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt'
2024-08-07T18:09:28,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt'
2024-08-07T18:09:28,026   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt'
2024-08-07T18:09:28,030   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt'
2024-08-07T18:09:28,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt'
2024-08-07T18:09:28,038   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt'
2024-08-07T18:09:28,041   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt'
2024-08-07T18:09:28,045   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt'
2024-08-07T18:09:28,050   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt'
2024-08-07T18:09:28,053   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt'
2024-08-07T18:09:28,055   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py'
2024-08-07T18:09:28,062   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt'
2024-08-07T18:09:28,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt'
2024-08-07T18:09:28,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt'
2024-08-07T18:09:28,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt'
2024-08-07T18:09:28,090   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt'
2024-08-07T18:09:28,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt'
2024-08-07T18:09:28,102   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt'
2024-08-07T18:09:28,111   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt'
2024-08-07T18:09:28,114   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt'
2024-08-07T18:09:28,125   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt'
2024-08-07T18:09:28,147   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt'
2024-08-07T18:09:28,151   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt'
2024-08-07T18:09:28,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt'
2024-08-07T18:09:28,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt'
2024-08-07T18:09:28,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt'
2024-08-07T18:09:28,180   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt'
2024-08-07T18:09:28,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt'
2024-08-07T18:09:28,195   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt'
2024-08-07T18:09:28,205   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt'
2024-08-07T18:09:28,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt'
2024-08-07T18:09:28,219   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt'
2024-08-07T18:09:28,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt'
2024-08-07T18:09:28,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt'
2024-08-07T18:09:28,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt'
2024-08-07T18:09:28,242   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt'
2024-08-07T18:09:28,253   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt'
2024-08-07T18:09:28,262   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt'
2024-08-07T18:09:28,264   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt'
2024-08-07T18:09:28,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt'
2024-08-07T18:09:28,273   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt'
2024-08-07T18:09:28,280   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt'
2024-08-07T18:09:28,289   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt'
2024-08-07T18:09:28,291   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt'
2024-08-07T18:09:28,303   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt'
2024-08-07T18:09:28,324   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt'
2024-08-07T18:09:28,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt'
2024-08-07T18:09:28,330   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt'
2024-08-07T18:09:28,334   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt'
2024-08-07T18:09:28,346   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt'
2024-08-07T18:09:28,356   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt'
2024-08-07T18:09:28,363   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt'
2024-08-07T18:09:28,371   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt'
2024-08-07T18:09:28,380   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt'
2024-08-07T18:09:28,389   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt'
2024-08-07T18:09:28,395   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt'
2024-08-07T18:09:28,402   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt'
2024-08-07T18:09:28,410   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt'
2024-08-07T18:09:28,411   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt'
2024-08-07T18:09:28,434   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt'
2024-08-07T18:09:28,465   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt'
2024-08-07T18:09:28,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt'
2024-08-07T18:09:28,522   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt'
2024-08-07T18:09:28,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt'
2024-08-07T18:09:28,573   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt'
2024-08-07T18:09:28,600   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt'
2024-08-07T18:09:28,607   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt'
2024-08-07T18:09:28,611   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt'
2024-08-07T18:09:28,615   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt'
2024-08-07T18:09:28,618   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt'
2024-08-07T18:09:28,621   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt'
2024-08-07T18:09:28,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt'
2024-08-07T18:09:28,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt'
2024-08-07T18:09:28,632   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt'
2024-08-07T18:09:28,638   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt'
2024-08-07T18:09:28,640   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt'
2024-08-07T18:09:28,651   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt'
2024-08-07T18:09:28,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt'
2024-08-07T18:09:28,663   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt'
2024-08-07T18:09:28,665   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt'
2024-08-07T18:09:28,668   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt'
2024-08-07T18:09:28,672   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt'
2024-08-07T18:09:28,675   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt'
2024-08-07T18:09:28,679   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt'
2024-08-07T18:09:28,683   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt'
2024-08-07T18:09:28,686   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt'
2024-08-07T18:09:28,688   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt'
2024-08-07T18:09:28,693   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt'
2024-08-07T18:09:28,696   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt'
2024-08-07T18:09:28,699   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt'
2024-08-07T18:09:28,701   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt'
2024-08-07T18:09:28,703   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt'
2024-08-07T18:09:28,705   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt'
2024-08-07T18:09:28,707   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt'
2024-08-07T18:09:28,709   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt'
2024-08-07T18:09:28,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt'
2024-08-07T18:09:28,713   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt'
2024-08-07T18:09:28,717   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt'
2024-08-07T18:09:28,721   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt'
2024-08-07T18:09:28,729   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt'
2024-08-07T18:09:28,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt'
2024-08-07T18:09:28,742   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt'
2024-08-07T18:09:28,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt'
2024-08-07T18:09:28,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt'
2024-08-07T18:09:28,763   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt'
2024-08-07T18:09:28,772   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt'
2024-08-07T18:09:28,787   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt'
2024-08-07T18:09:28,792   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt'
2024-08-07T18:09:28,799   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt'
2024-08-07T18:09:28,806   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt'
2024-08-07T18:09:28,812   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt'
2024-08-07T18:09:28,817   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt'
2024-08-07T18:09:28,826   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt'
2024-08-07T18:09:28,830   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt'
2024-08-07T18:09:28,835   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt'
2024-08-07T18:09:28,847   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt'
2024-08-07T18:09:28,866   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt'
2024-08-07T18:09:28,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt'
2024-08-07T18:09:28,889   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt'
2024-08-07T18:09:28,901   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt'
2024-08-07T18:09:28,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt'
2024-08-07T18:09:28,931   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt'
2024-08-07T18:09:28,940   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt'
2024-08-07T18:09:28,951   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt'
2024-08-07T18:09:28,960   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt'
2024-08-07T18:09:28,962   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt'
2024-08-07T18:09:28,972   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt'
2024-08-07T18:09:28,986   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt'
2024-08-07T18:09:28,992   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt'
2024-08-07T18:09:28,998   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt'
2024-08-07T18:09:29,006   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt'
2024-08-07T18:09:29,012   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt'
2024-08-07T18:09:29,017   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt'
2024-08-07T18:09:29,026   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt'
2024-08-07T18:09:29,029   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt'
2024-08-07T18:09:29,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt'
2024-08-07T18:09:29,046   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt'
2024-08-07T18:09:29,065   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt'
2024-08-07T18:09:29,075   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt'
2024-08-07T18:09:29,088   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt'
2024-08-07T18:09:29,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt'
2024-08-07T18:09:29,111   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt'
2024-08-07T18:09:29,131   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt'
2024-08-07T18:09:29,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt'
2024-08-07T18:09:29,151   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt'
2024-08-07T18:09:29,160   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt'
2024-08-07T18:09:29,162   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt'
2024-08-07T18:09:29,171   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt'
2024-08-07T18:09:29,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt'
2024-08-07T18:09:29,192   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt'
2024-08-07T18:09:29,199   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt'
2024-08-07T18:09:29,206   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt'
2024-08-07T18:09:29,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt'
2024-08-07T18:09:29,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt'
2024-08-07T18:09:29,227   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt'
2024-08-07T18:09:29,231   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt'
2024-08-07T18:09:29,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt'
2024-08-07T18:09:29,248   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt'
2024-08-07T18:09:29,268   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt'
2024-08-07T18:09:29,278   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt'
2024-08-07T18:09:29,292   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt'
2024-08-07T18:09:29,305   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt'
2024-08-07T18:09:29,316   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt'
2024-08-07T18:09:29,337   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt'
2024-08-07T18:09:29,347   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt'
2024-08-07T18:09:29,358   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt'
2024-08-07T18:09:29,367   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt'
2024-08-07T18:09:29,368   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt'
2024-08-07T18:09:29,384   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt'
2024-08-07T18:09:29,389   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt'
2024-08-07T18:09:29,394   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt'
2024-08-07T18:09:29,399   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt'
2024-08-07T18:09:29,404   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt'
2024-08-07T18:09:29,410   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt'
2024-08-07T18:09:29,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt'
2024-08-07T18:09:29,420   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt'
2024-08-07T18:09:29,423   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt'
2024-08-07T18:09:29,428   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt'
2024-08-07T18:09:29,460   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt'
2024-08-07T18:09:29,465   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt'
2024-08-07T18:09:29,479   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt'
2024-08-07T18:09:29,498   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt'
2024-08-07T18:09:29,512   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt'
2024-08-07T18:09:29,526   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt'
2024-08-07T18:09:29,535   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt'
2024-08-07T18:09:29,547   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt'
2024-08-07T18:09:29,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt'
2024-08-07T18:09:29,566   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt'
2024-08-07T18:09:29,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt'
2024-08-07T18:09:29,575   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt'
2024-08-07T18:09:29,576   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt'
2024-08-07T18:09:29,595   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt'
2024-08-07T18:09:29,602   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt'
2024-08-07T18:09:29,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt'
2024-08-07T18:09:29,616   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt'
2024-08-07T18:09:29,624   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt'
2024-08-07T18:09:29,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt'
2024-08-07T18:09:29,638   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt'
2024-08-07T18:09:29,645   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt'
2024-08-07T18:09:29,650   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt'
2024-08-07T18:09:29,656   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt'
2024-08-07T18:09:29,697   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt'
2024-08-07T18:09:29,704   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt'
2024-08-07T18:09:29,725   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt'
2024-08-07T18:09:29,748   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt'
2024-08-07T18:09:29,768   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt'
2024-08-07T18:09:29,786   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt'
2024-08-07T18:09:29,800   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt'
2024-08-07T18:09:29,817   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt'
2024-08-07T18:09:29,831   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt'
2024-08-07T18:09:29,841   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt'
2024-08-07T18:09:29,843   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt'
2024-08-07T18:09:29,855   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt'
2024-08-07T18:09:29,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt'
2024-08-07T18:09:29,859   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt'
2024-08-07T18:09:29,861   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt'
2024-08-07T18:09:29,868   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt'
2024-08-07T18:09:29,870   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt'
2024-08-07T18:09:29,872   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt'
2024-08-07T18:09:29,874   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt'
2024-08-07T18:09:29,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt'
2024-08-07T18:09:29,879   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt'
2024-08-07T18:09:29,882   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt'
2024-08-07T18:09:29,885   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt'
2024-08-07T18:09:29,889   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt'
2024-08-07T18:09:29,892   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt'
2024-08-07T18:09:29,895   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt'
2024-08-07T18:09:29,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt'
2024-08-07T18:09:29,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt'
2024-08-07T18:09:29,905   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt'
2024-08-07T18:09:29,908   adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py'
2024-08-07T18:09:29,919   adding 'SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py'
2024-08-07T18:09:29,925   adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py'
2024-08-07T18:09:29,930   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py'
2024-08-07T18:09:29,932   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py'
2024-08-07T18:09:29,933   adding 'SigProfilerMatrixGenerator/scripts/__init__.py'
2024-08-07T18:09:29,936   adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py'
2024-08-07T18:09:29,937   adding 'SigProfilerMatrixGenerator/scripts/ref_install.py'
2024-08-07T18:09:29,940   adding 'SigProfilerMatrixGenerator/scripts/reference_genome_manager.py'
2024-08-07T18:09:29,942   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py'
2024-08-07T18:09:29,943   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py'
2024-08-07T18:09:29,946   adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py'
2024-08-07T18:09:29,948   adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py'
2024-08-07T18:09:29,950   adding 'SigProfilerMatrixGenerator/scripts/vcfToBedpe.py'
2024-08-07T18:09:29,969   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt'
2024-08-07T18:09:29,971   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt'
2024-08-07T18:09:29,991   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt'
2024-08-07T18:09:29,992   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt'
2024-08-07T18:09:29,993   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py'
2024-08-07T18:09:30,013   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt'
2024-08-07T18:09:30,015   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt'
2024-08-07T18:09:30,034   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt'
2024-08-07T18:09:30,036   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt'
2024-08-07T18:09:30,038   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/LICENSE'
2024-08-07T18:09:30,040   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/METADATA'
2024-08-07T18:09:30,041   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/WHEEL'
2024-08-07T18:09:30,042   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/entry_points.txt'
2024-08-07T18:09:30,043   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/top_level.txt'
2024-08-07T18:09:30,059   adding 'SigProfilerMatrixGenerator-1.2.28.dist-info/RECORD'
2024-08-07T18:09:30,499   removing build/bdist.linux-armv7l/wheel
2024-08-07T18:09:30,862   Building wheel for sigprofilermatrixgenerator (setup.py): finished with status 'done'
2024-08-07T18:09:31,271   Created wheel for sigprofilermatrixgenerator: filename=SigProfilerMatrixGenerator-1.2.28-py3-none-any.whl size=41423702 sha256=9b0f53c7482ce7e2ea84890a29ea4f693dad061abdad802ad95d7f154a7a607b
2024-08-07T18:09:31,272   Stored in directory: /tmp/pip-ephem-wheel-cache-ksckei65/wheels/35/34/e7/4d6ee77608d38e7d3a05a1bb57b25daede6241da998643c870
2024-08-07T18:09:31,357 Successfully built sigprofilermatrixgenerator
2024-08-07T18:09:32,312 Removed build tracker: '/tmp/pip-build-tracker-phxjgu5s'