2024-08-08T19:42:49,764 Created temporary directory: /tmp/pip-build-tracker-u_5ybcm1 2024-08-08T19:42:49,765 Initialized build tracking at /tmp/pip-build-tracker-u_5ybcm1 2024-08-08T19:42:49,766 Created build tracker: /tmp/pip-build-tracker-u_5ybcm1 2024-08-08T19:42:49,766 Entered build tracker: /tmp/pip-build-tracker-u_5ybcm1 2024-08-08T19:42:49,767 Created temporary directory: /tmp/pip-wheel-9m7bgm4z 2024-08-08T19:42:49,771 Created temporary directory: /tmp/pip-ephem-wheel-cache-uaklgmfu 2024-08-08T19:42:49,801 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-08-08T19:42:49,804 2 location(s) to search for versions of openpathsampling-cli: 2024-08-08T19:42:49,804 * https://pypi.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,804 * https://www.piwheels.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,805 Fetching project page and analyzing links: https://pypi.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,806 Getting page https://pypi.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,807 Found index url https://pypi.org/simple/ 2024-08-08T19:42:49,909 Fetched page https://pypi.org/simple/openpathsampling-cli/ as application/vnd.pypi.simple.v1+json 2024-08-08T19:42:49,914 Found link https://files.pythonhosted.org/packages/39/e8/a919d9e88bdc612d59d9d085bd9f691e15f5e139232c4a2811ced33f1b85/openpathsampling-cli-0.0.1.tar.gz (from https://pypi.org/simple/openpathsampling-cli/), version: 0.0.1 2024-08-08T19:42:49,914 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/01/5b/0359a3e3c7c5a0ba8d68e23139de8100614369610de62d8515ae55039751/openpathsampling_cli-0.0.1-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) 2024-08-08T19:42:49,915 Found link https://files.pythonhosted.org/packages/43/1d/4cc37abb455b204b730ba70ae9d19683ffa923517cdd59bbb3140370d635/openpathsampling-cli-0.0.2.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.0.2 2024-08-08T19:42:49,916 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/9b/ce/76c1f78f67d72a5c82c5a39c23a1c8c4d1f8190121151acfc2e7790e548e/openpathsampling_cli-0.0.2-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,917 Found link https://files.pythonhosted.org/packages/8a/82/79537868c661e8936bbe51392efadeeac69e0e2654c4cdff5f6b319b1546/openpathsampling-cli-0.0.3.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.0.3 2024-08-08T19:42:49,918 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/06/e2/9a5f7a342b59db0a3156e2a9d2b86f80d48d8e596b53a7a569820206e7ae/openpathsampling_cli-0.0.3-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,919 Found link https://files.pythonhosted.org/packages/55/4f/bdb351d43bfc502f876dd5e6e81cd623c7bf1c55a245054928775fd65745/openpathsampling-cli-0.1.0.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.1.0 2024-08-08T19:42:49,920 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/74/75/03998e6818797cc5def8a7d93b33fb51bdddeffcef4b4e447adcd497ac5a/openpathsampling_cli-0.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,921 Found link https://files.pythonhosted.org/packages/fa/8e/83d0d5acff1583627e0d3448f6b042c7089e8a0fcc876af61f99b7f3eed2/openpathsampling-cli-0.1.1.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.1.1 2024-08-08T19:42:49,921 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/1d/78/b20432f8666f56496bfea56ff5ed2e6f901e2adfa178cf95f5aeaa1198f2/openpathsampling_cli-0.1.1-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,922 Found link https://files.pythonhosted.org/packages/7c/3f/b50f7dece7c46f89f524ea485049d54e85a6b5a94570c5880ef54dde87e6/openpathsampling-cli-0.2.0.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.2.0 2024-08-08T19:42:49,923 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/0c/4d/0c7f0b6fbda414d189667cbfd9ff565b221e257e7eb7099a56d10ed61928/openpathsampling_cli-0.2.0-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,924 Found link https://files.pythonhosted.org/packages/7d/4f/b0131fca09f527f7c55e43915639cffba898067158f96af603ff42f4bca9/openpathsampling-cli-0.2.1.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6), version: 0.2.1 2024-08-08T19:42:49,925 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/53/06/16d59f1c5fe94083b7522382328394f26caaf9c3bcb4d911bda18a03180f/openpathsampling_cli-0.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,925 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/3f/ea/8ad800ba6f9b7f27a571841c2c4866503dca1cdaf23fc2352728a6e7d475/openpathsampling_cli-0.3.0-py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.10) 2024-08-08T19:42:49,926 Found link https://files.pythonhosted.org/packages/e3/8b/5bb0151c580037a9560ab5e2995d4b474718803b1c07c4c564487bf79e5b/openpathsampling_cli-0.3.0.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.10), version: 0.3.0 2024-08-08T19:42:49,927 Skipping link: No binaries permitted for openpathsampling-cli: https://files.pythonhosted.org/packages/21/1d/fa46b869dc8464fab8327f8cabc4f0cbdedd581496751a3fd0f2daaf1684/openpathsampling_cli-0.3.1-py3-none-any.whl (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.10) 2024-08-08T19:42:49,927 Found link https://files.pythonhosted.org/packages/02/37/d96ab1285670165afe16c49cb6988d784a7f7709cac53dcd3dadbf21db6d/openpathsampling_cli-0.3.1.tar.gz (from https://pypi.org/simple/openpathsampling-cli/) (requires-python:>=3.10), version: 0.3.1 2024-08-08T19:42:49,928 Fetching project page and analyzing links: https://www.piwheels.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,929 Getting page https://www.piwheels.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,931 Found index url https://www.piwheels.org/simple/ 2024-08-08T19:42:49,980 Fetched page https://www.piwheels.org/simple/openpathsampling-cli/ as text/html 2024-08-08T19:42:49,983 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.3.0-py3-none-any.whl#sha256=9dd27d1d1e08381cdbed849837e128f77ac7b6f468aa2013a5632bff3a61ea6f (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.10) 2024-08-08T19:42:49,984 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.2.1-py2.py3-none-any.whl#sha256=59789008c8ee5e1dad5ea37eda0e1002a440451a078deaeefbcf7dffefd80ec8 (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,985 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.2.0-py2.py3-none-any.whl#sha256=f5e90bf6502d52ec5b88f12fa52d19a42f90d8f99e0b257b8aadb1e240022a3b (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,985 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.1.1-py2.py3-none-any.whl#sha256=f25c357775afb869e6444b5c14d2ae8a2746cf09feda619c8d499def6fbc1ea2 (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,986 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.1.0-py2.py3-none-any.whl#sha256=9bed04b703f77c2901f49c994ec5b6c203620011eb26db3cef4f53affb6d5035 (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,987 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.0.3-py2.py3-none-any.whl#sha256=8032fcb323d947519b396ce10d354d22370bd8a94d98025f6f8066d429a0bba0 (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,987 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.0.2-py2.py3-none-any.whl#sha256=b4e559a95608ca0e52f84b79aa25c00bc8f7d80ae4660535c3c3259e5fadc224 (from https://www.piwheels.org/simple/openpathsampling-cli/) (requires-python:>=3.6) 2024-08-08T19:42:49,988 Skipping link: No binaries permitted for openpathsampling-cli: https://www.piwheels.org/simple/openpathsampling-cli/openpathsampling_cli-0.0.1-py2.py3-none-any.whl#sha256=1dad147efe2e5ccf5d66e172bf8b53ef80638c593a5b904214af93f3d89a29e8 (from https://www.piwheels.org/simple/openpathsampling-cli/) 2024-08-08T19:42:49,988 Skipping link: not a file: https://www.piwheels.org/simple/openpathsampling-cli/ 2024-08-08T19:42:49,989 Skipping link: not a file: https://pypi.org/simple/openpathsampling-cli/ 2024-08-08T19:42:50,008 Given no hashes to check 1 links for project 'openpathsampling-cli': discarding no candidates 2024-08-08T19:42:50,026 Collecting openpathsampling-cli==0.3.1 2024-08-08T19:42:50,029 Created temporary directory: /tmp/pip-unpack-6cswjeoe 2024-08-08T19:42:50,126 Downloading openpathsampling_cli-0.3.1.tar.gz (101 kB) 2024-08-08T19:42:50,383 Added openpathsampling-cli==0.3.1 from https://files.pythonhosted.org/packages/02/37/d96ab1285670165afe16c49cb6988d784a7f7709cac53dcd3dadbf21db6d/openpathsampling_cli-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-u_5ybcm1' 2024-08-08T19:42:50,385 Running setup.py (path:/tmp/pip-wheel-9m7bgm4z/openpathsampling-cli_e987f4f6c2fc4a37a1158b004db6fd69/setup.py) egg_info for package openpathsampling-cli 2024-08-08T19:42:50,386 Created temporary directory: /tmp/pip-pip-egg-info-en6dc5cz 2024-08-08T19:42:50,386 Preparing metadata (setup.py): started 2024-08-08T19:42:50,388 Running command python setup.py egg_info 2024-08-08T19:42:50,957 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:458: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-08-08T19:42:50,958 !! 2024-08-08T19:42:50,959 ******************************************************************************** 2024-08-08T19:42:50,959 Usage of dash-separated 'license-file' will not be supported in future 2024-08-08T19:42:50,960 versions. Please use the underscore name 'license_file' instead. 2024-08-08T19:42:50,961 By 2024-Sep-26, you need to update your project and remove deprecated calls 2024-08-08T19:42:50,962 or your builds will no longer be supported. 2024-08-08T19:42:50,963 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-08-08T19:42:50,964 ******************************************************************************** 2024-08-08T19:42:50,965 !! 2024-08-08T19:42:50,966 opt = self.warn_dash_deprecation(opt, section) 2024-08-08T19:42:51,522 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:458: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-08-08T19:42:51,523 !! 2024-08-08T19:42:51,524 ******************************************************************************** 2024-08-08T19:42:51,525 Usage of dash-separated 'license-file' will not be supported in future 2024-08-08T19:42:51,525 versions. Please use the underscore name 'license_file' instead. 2024-08-08T19:42:51,527 By 2024-Sep-26, you need to update your project and remove deprecated calls 2024-08-08T19:42:51,527 or your builds will no longer be supported. 2024-08-08T19:42:51,528 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-08-08T19:42:51,528 ******************************************************************************** 2024-08-08T19:42:51,529 !! 2024-08-08T19:42:51,530 opt = self.warn_dash_deprecation(opt, section) 2024-08-08T19:42:51,578 running egg_info 2024-08-08T19:42:51,580 creating /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info 2024-08-08T19:42:51,607 writing /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/PKG-INFO 2024-08-08T19:42:51,610 writing dependency_links to /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/dependency_links.txt 2024-08-08T19:42:51,612 writing entry points to /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/entry_points.txt 2024-08-08T19:42:51,613 writing requirements to /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/requires.txt 2024-08-08T19:42:51,614 writing top-level names to /tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/top_level.txt 2024-08-08T19:42:51,616 writing manifest file '/tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/SOURCES.txt' 2024-08-08T19:42:51,712 reading manifest file '/tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/SOURCES.txt' 2024-08-08T19:42:51,714 adding license file 'LICENSE' 2024-08-08T19:42:51,719 writing manifest file '/tmp/pip-pip-egg-info-en6dc5cz/openpathsampling_cli.egg-info/SOURCES.txt' 2024-08-08T19:42:51,835 Preparing metadata (setup.py): finished with status 'done' 2024-08-08T19:42:51,839 Source in /tmp/pip-wheel-9m7bgm4z/openpathsampling-cli_e987f4f6c2fc4a37a1158b004db6fd69 has version 0.3.1, which satisfies requirement openpathsampling-cli==0.3.1 from https://files.pythonhosted.org/packages/02/37/d96ab1285670165afe16c49cb6988d784a7f7709cac53dcd3dadbf21db6d/openpathsampling_cli-0.3.1.tar.gz 2024-08-08T19:42:51,840 Removed openpathsampling-cli==0.3.1 from https://files.pythonhosted.org/packages/02/37/d96ab1285670165afe16c49cb6988d784a7f7709cac53dcd3dadbf21db6d/openpathsampling_cli-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-u_5ybcm1' 2024-08-08T19:42:51,846 Created temporary directory: /tmp/pip-unpack-3xyy3dk7 2024-08-08T19:42:51,847 Created temporary directory: /tmp/pip-unpack-xatmeidk 2024-08-08T19:42:51,848 Building wheels for collected packages: openpathsampling-cli 2024-08-08T19:42:51,852 Created temporary directory: /tmp/pip-wheel-r_ot5l_f 2024-08-08T19:42:51,852 Building wheel for openpathsampling-cli (setup.py): started 2024-08-08T19:42:51,854 Destination directory: /tmp/pip-wheel-r_ot5l_f 2024-08-08T19:42:51,854 Running command python setup.py bdist_wheel 2024-08-08T19:42:52,420 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:458: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-08-08T19:42:52,420 !! 2024-08-08T19:42:52,422 ******************************************************************************** 2024-08-08T19:42:52,422 Usage of dash-separated 'license-file' will not be supported in future 2024-08-08T19:42:52,423 versions. Please use the underscore name 'license_file' instead. 2024-08-08T19:42:52,424 By 2024-Sep-26, you need to update your project and remove deprecated calls 2024-08-08T19:42:52,424 or your builds will no longer be supported. 2024-08-08T19:42:52,425 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-08-08T19:42:52,426 ******************************************************************************** 2024-08-08T19:42:52,427 !! 2024-08-08T19:42:52,428 opt = self.warn_dash_deprecation(opt, section) 2024-08-08T19:42:52,987 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:458: SetuptoolsDeprecationWarning: Invalid dash-separated options 2024-08-08T19:42:52,988 !! 2024-08-08T19:42:52,989 ******************************************************************************** 2024-08-08T19:42:52,990 Usage of dash-separated 'license-file' will not be supported in future 2024-08-08T19:42:52,990 versions. Please use the underscore name 'license_file' instead. 2024-08-08T19:42:52,991 By 2024-Sep-26, you need to update your project and remove deprecated calls 2024-08-08T19:42:52,991 or your builds will no longer be supported. 2024-08-08T19:42:52,992 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2024-08-08T19:42:52,993 ******************************************************************************** 2024-08-08T19:42:52,993 !! 2024-08-08T19:42:52,994 opt = self.warn_dash_deprecation(opt, section) 2024-08-08T19:42:53,014 running bdist_wheel 2024-08-08T19:42:53,154 running build 2024-08-08T19:42:53,155 running build_py 2024-08-08T19:42:53,184 creating build 2024-08-08T19:42:53,185 creating build/lib 2024-08-08T19:42:53,186 creating build/lib/paths_cli 2024-08-08T19:42:53,187 copying paths_cli/errors.py -> build/lib/paths_cli 2024-08-08T19:42:53,189 copying paths_cli/parameters.py -> build/lib/paths_cli 2024-08-08T19:42:53,191 copying paths_cli/param_core.py -> build/lib/paths_cli 2024-08-08T19:42:53,193 copying paths_cli/plugin_management.py -> build/lib/paths_cli 2024-08-08T19:42:53,195 copying paths_cli/file_copying.py -> build/lib/paths_cli 2024-08-08T19:42:53,196 copying paths_cli/version.py -> build/lib/paths_cli 2024-08-08T19:42:53,198 copying paths_cli/_installed_version.py -> build/lib/paths_cli 2024-08-08T19:42:53,200 copying paths_cli/__init__.py -> build/lib/paths_cli 2024-08-08T19:42:53,201 copying paths_cli/utils.py -> build/lib/paths_cli 2024-08-08T19:42:53,203 copying paths_cli/cli.py -> build/lib/paths_cli 2024-08-08T19:42:53,205 creating build/lib/paths_cli/commands 2024-08-08T19:42:53,206 copying paths_cli/commands/wizard.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,208 copying paths_cli/commands/compile.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,210 copying paths_cli/commands/contents.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,212 copying paths_cli/commands/md.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,214 copying paths_cli/commands/visit_all.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,216 copying paths_cli/commands/append.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,218 copying paths_cli/commands/__init__.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,219 copying paths_cli/commands/equilibrate.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,221 copying paths_cli/commands/pathsampling.py -> build/lib/paths_cli/commands 2024-08-08T19:42:53,223 creating build/lib/paths_cli/compat 2024-08-08T19:42:53,224 copying paths_cli/compat/openmm.py -> build/lib/paths_cli/compat 2024-08-08T19:42:53,226 copying paths_cli/compat/__init__.py -> build/lib/paths_cli/compat 2024-08-08T19:42:53,228 creating build/lib/paths_cli/tests 2024-08-08T19:42:53,229 copying paths_cli/tests/test_file_copying.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,231 copying paths_cli/tests/conftest.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,233 copying paths_cli/tests/null_command.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,235 copying paths_cli/tests/test_cli.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,237 copying paths_cli/tests/test_utils.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,238 copying paths_cli/tests/__init__.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,240 copying paths_cli/tests/test_parameters.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,242 copying paths_cli/tests/utils.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,244 copying paths_cli/tests/test_plugin_management.py -> build/lib/paths_cli/tests 2024-08-08T19:42:53,246 creating build/lib/paths_cli/compiling 2024-08-08T19:42:53,247 copying paths_cli/compiling/errors.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,249 copying paths_cli/compiling/volumes.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,251 copying paths_cli/compiling/plugins.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,252 copying paths_cli/compiling/schemes.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,254 copying paths_cli/compiling/root_compiler.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,256 copying paths_cli/compiling/engines.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,258 copying paths_cli/compiling/gendocs.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,260 copying paths_cli/compiling/json_type.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,261 copying paths_cli/compiling/tools.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,263 copying paths_cli/compiling/shooting.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,264 copying paths_cli/compiling/strategies.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,266 copying paths_cli/compiling/__init__.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,268 copying paths_cli/compiling/networks.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,270 copying paths_cli/compiling/topology.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,271 copying paths_cli/compiling/cvs.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,273 copying paths_cli/compiling/core.py -> build/lib/paths_cli/compiling 2024-08-08T19:42:53,276 creating build/lib/paths_cli/wizard 2024-08-08T19:42:53,277 copying paths_cli/wizard/errors.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,279 copying paths_cli/wizard/parameters.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,282 copying paths_cli/wizard/volumes.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,284 copying paths_cli/wizard/openmm.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,285 copying paths_cli/wizard/two_state_tps.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,287 copying paths_cli/wizard/plugin_registration.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,289 copying paths_cli/wizard/plugin_classes.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,291 copying paths_cli/wizard/run_module.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,293 copying paths_cli/wizard/standard_categories.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,295 copying paths_cli/wizard/wizard.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,297 copying paths_cli/wizard/pause.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,299 copying paths_cli/wizard/helper.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,301 copying paths_cli/wizard/engines.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,303 copying paths_cli/wizard/tools.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,304 copying paths_cli/wizard/shooting.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,306 copying paths_cli/wizard/steps.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,308 copying paths_cli/wizard/__init__.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,309 copying paths_cli/wizard/joke.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,311 copying paths_cli/wizard/load_from_ops.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,313 copying paths_cli/wizard/tps.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,314 copying paths_cli/wizard/cvs.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,316 copying paths_cli/wizard/core.py -> build/lib/paths_cli/wizard 2024-08-08T19:42:53,319 creating build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,320 copying paths_cli/tests/commands/conftest.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,321 copying paths_cli/tests/commands/test_md.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,324 copying paths_cli/tests/commands/test_contents.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,326 copying paths_cli/tests/commands/test_append.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,327 copying paths_cli/tests/commands/test_equilibrate.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,329 copying paths_cli/tests/commands/test_compile.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,330 copying paths_cli/tests/commands/test_visit_all.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,332 copying paths_cli/tests/commands/test_pathsampling.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,333 copying paths_cli/tests/commands/__init__.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,335 copying paths_cli/tests/commands/utils.py -> build/lib/paths_cli/tests/commands 2024-08-08T19:42:53,337 creating build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,338 copying paths_cli/tests/compiling/test_tools.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,339 copying paths_cli/tests/compiling/test_topology.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,341 copying paths_cli/tests/compiling/test_gendocs.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,343 copying paths_cli/tests/compiling/test_cvs.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,344 copying paths_cli/tests/compiling/test_core.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,346 copying paths_cli/tests/compiling/test_volumes.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,348 copying paths_cli/tests/compiling/test_root_compiler.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,351 copying paths_cli/tests/compiling/test_plugins.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,352 copying paths_cli/tests/compiling/test_networks.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,354 copying paths_cli/tests/compiling/test_shooting.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,355 copying paths_cli/tests/compiling/__init__.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,357 copying paths_cli/tests/compiling/test_schemes.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,359 copying paths_cli/tests/compiling/utils.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,360 copying paths_cli/tests/compiling/test_engines.py -> build/lib/paths_cli/tests/compiling 2024-08-08T19:42:53,363 creating build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,364 copying paths_cli/tests/wizard/test_plugin_registration.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,366 copying paths_cli/tests/wizard/test_tools.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,367 copying paths_cli/tests/wizard/test_standard_categories.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,369 copying paths_cli/tests/wizard/conftest.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,371 copying paths_cli/tests/wizard/test_openmm.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,372 copying paths_cli/tests/wizard/test_errors.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,374 copying paths_cli/tests/wizard/test_cvs.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,376 copying paths_cli/tests/wizard/test_wizard.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,378 copying paths_cli/tests/wizard/test_core.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,379 copying paths_cli/tests/wizard/test_volumes.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,381 copying paths_cli/tests/wizard/test_pause.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,383 copying paths_cli/tests/wizard/mock_wizard.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,385 copying paths_cli/tests/wizard/test_two_state_tps.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,387 copying paths_cli/tests/wizard/test_plugin_classes.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,389 copying paths_cli/tests/wizard/test_load_from_ops.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,391 copying paths_cli/tests/wizard/test_shooting.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,392 copying paths_cli/tests/wizard/test_tps.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,394 copying paths_cli/tests/wizard/__init__.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,395 copying paths_cli/tests/wizard/test_parameters.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,397 copying paths_cli/tests/wizard/test_helper.py -> build/lib/paths_cli/tests/wizard 2024-08-08T19:42:53,399 creating build/lib/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,400 copying paths_cli/compiling/_gendocs/config_handler.py -> build/lib/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,402 copying paths_cli/compiling/_gendocs/json_type_handlers.py -> build/lib/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,404 copying paths_cli/compiling/_gendocs/__init__.py -> build/lib/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,406 copying paths_cli/compiling/_gendocs/docs_generator.py -> build/lib/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,446 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-08-08T19:42:53,446 !! 2024-08-08T19:42:53,447 ******************************************************************************** 2024-08-08T19:42:53,448 Please avoid running ``setup.py`` directly. 2024-08-08T19:42:53,448 Instead, use pypa/build, pypa/installer or other 2024-08-08T19:42:53,449 standards-based tools. 2024-08-08T19:42:53,450 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-08-08T19:42:53,450 ******************************************************************************** 2024-08-08T19:42:53,451 !! 2024-08-08T19:42:53,452 self.initialize_options() 2024-08-08T19:42:53,474 installing to build/bdist.linux-armv7l/wheel 2024-08-08T19:42:53,474 running install 2024-08-08T19:42:53,499 running install_lib 2024-08-08T19:42:53,527 creating build/bdist.linux-armv7l 2024-08-08T19:42:53,527 creating build/bdist.linux-armv7l/wheel 2024-08-08T19:42:53,529 creating build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,530 copying build/lib/paths_cli/errors.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,532 copying build/lib/paths_cli/parameters.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,534 copying build/lib/paths_cli/param_core.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,536 copying build/lib/paths_cli/plugin_management.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,539 creating build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,539 copying build/lib/paths_cli/commands/wizard.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,541 copying build/lib/paths_cli/commands/compile.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,543 copying build/lib/paths_cli/commands/contents.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,545 copying build/lib/paths_cli/commands/md.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,547 copying build/lib/paths_cli/commands/visit_all.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,549 copying build/lib/paths_cli/commands/append.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,551 copying build/lib/paths_cli/commands/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,553 copying build/lib/paths_cli/commands/equilibrate.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,554 copying build/lib/paths_cli/commands/pathsampling.py -> build/bdist.linux-armv7l/wheel/paths_cli/commands 2024-08-08T19:42:53,557 creating build/bdist.linux-armv7l/wheel/paths_cli/compat 2024-08-08T19:42:53,558 copying build/lib/paths_cli/compat/openmm.py -> build/bdist.linux-armv7l/wheel/paths_cli/compat 2024-08-08T19:42:53,559 copying build/lib/paths_cli/compat/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/compat 2024-08-08T19:42:53,561 creating build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,562 copying build/lib/paths_cli/tests/test_file_copying.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,565 copying build/lib/paths_cli/tests/conftest.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,566 copying build/lib/paths_cli/tests/null_command.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,569 creating build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,570 copying build/lib/paths_cli/tests/commands/conftest.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,571 copying build/lib/paths_cli/tests/commands/test_md.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,573 copying build/lib/paths_cli/tests/commands/test_contents.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,575 copying build/lib/paths_cli/tests/commands/test_append.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,577 copying build/lib/paths_cli/tests/commands/test_equilibrate.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,578 copying build/lib/paths_cli/tests/commands/test_compile.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,580 copying build/lib/paths_cli/tests/commands/test_visit_all.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,582 copying build/lib/paths_cli/tests/commands/test_pathsampling.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,584 copying build/lib/paths_cli/tests/commands/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,586 copying build/lib/paths_cli/tests/commands/utils.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/commands 2024-08-08T19:42:53,587 copying build/lib/paths_cli/tests/test_cli.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,589 copying build/lib/paths_cli/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,591 creating build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,592 copying build/lib/paths_cli/tests/compiling/test_tools.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,594 copying build/lib/paths_cli/tests/compiling/test_topology.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,596 copying build/lib/paths_cli/tests/compiling/test_gendocs.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,598 copying build/lib/paths_cli/tests/compiling/test_cvs.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,599 copying build/lib/paths_cli/tests/compiling/test_core.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,602 copying build/lib/paths_cli/tests/compiling/test_volumes.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,604 copying build/lib/paths_cli/tests/compiling/test_root_compiler.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,606 copying build/lib/paths_cli/tests/compiling/test_plugins.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,608 copying build/lib/paths_cli/tests/compiling/test_networks.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,610 copying build/lib/paths_cli/tests/compiling/test_shooting.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,612 copying build/lib/paths_cli/tests/compiling/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,613 copying build/lib/paths_cli/tests/compiling/test_schemes.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,615 copying build/lib/paths_cli/tests/compiling/utils.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,617 copying build/lib/paths_cli/tests/compiling/test_engines.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/compiling 2024-08-08T19:42:53,619 creating build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,620 copying build/lib/paths_cli/tests/wizard/test_plugin_registration.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,622 copying build/lib/paths_cli/tests/wizard/test_tools.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,623 copying build/lib/paths_cli/tests/wizard/test_standard_categories.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,625 copying build/lib/paths_cli/tests/wizard/conftest.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,627 copying build/lib/paths_cli/tests/wizard/test_openmm.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,628 copying build/lib/paths_cli/tests/wizard/test_errors.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,630 copying build/lib/paths_cli/tests/wizard/test_cvs.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,632 copying build/lib/paths_cli/tests/wizard/test_wizard.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,634 copying build/lib/paths_cli/tests/wizard/test_core.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,636 copying build/lib/paths_cli/tests/wizard/test_volumes.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,638 copying build/lib/paths_cli/tests/wizard/test_pause.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,640 copying build/lib/paths_cli/tests/wizard/mock_wizard.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,642 copying build/lib/paths_cli/tests/wizard/test_two_state_tps.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,644 copying build/lib/paths_cli/tests/wizard/test_plugin_classes.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,646 copying build/lib/paths_cli/tests/wizard/test_load_from_ops.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,648 copying build/lib/paths_cli/tests/wizard/test_shooting.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,650 copying build/lib/paths_cli/tests/wizard/test_tps.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,652 copying build/lib/paths_cli/tests/wizard/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,654 copying build/lib/paths_cli/tests/wizard/test_parameters.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,656 copying build/lib/paths_cli/tests/wizard/test_helper.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests/wizard 2024-08-08T19:42:53,658 copying build/lib/paths_cli/tests/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,659 copying build/lib/paths_cli/tests/test_parameters.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,662 copying build/lib/paths_cli/tests/utils.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,664 copying build/lib/paths_cli/tests/test_plugin_management.py -> build/bdist.linux-armv7l/wheel/paths_cli/tests 2024-08-08T19:42:53,666 creating build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,667 copying build/lib/paths_cli/compiling/errors.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,670 copying build/lib/paths_cli/compiling/volumes.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,672 copying build/lib/paths_cli/compiling/plugins.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,673 copying build/lib/paths_cli/compiling/schemes.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,675 copying build/lib/paths_cli/compiling/root_compiler.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,678 creating build/bdist.linux-armv7l/wheel/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,679 copying build/lib/paths_cli/compiling/_gendocs/config_handler.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,681 copying build/lib/paths_cli/compiling/_gendocs/json_type_handlers.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,683 copying build/lib/paths_cli/compiling/_gendocs/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,685 copying build/lib/paths_cli/compiling/_gendocs/docs_generator.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling/_gendocs 2024-08-08T19:42:53,687 copying build/lib/paths_cli/compiling/engines.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,690 copying build/lib/paths_cli/compiling/gendocs.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,692 copying build/lib/paths_cli/compiling/json_type.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,694 copying build/lib/paths_cli/compiling/tools.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,696 copying build/lib/paths_cli/compiling/shooting.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,698 copying build/lib/paths_cli/compiling/strategies.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,700 copying build/lib/paths_cli/compiling/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,702 copying build/lib/paths_cli/compiling/networks.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,704 copying build/lib/paths_cli/compiling/topology.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,706 copying build/lib/paths_cli/compiling/cvs.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,708 copying build/lib/paths_cli/compiling/core.py -> build/bdist.linux-armv7l/wheel/paths_cli/compiling 2024-08-08T19:42:53,711 copying build/lib/paths_cli/file_copying.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,714 creating build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,715 copying build/lib/paths_cli/wizard/errors.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,717 copying build/lib/paths_cli/wizard/parameters.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,719 copying build/lib/paths_cli/wizard/volumes.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,722 copying build/lib/paths_cli/wizard/openmm.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,724 copying build/lib/paths_cli/wizard/two_state_tps.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,726 copying build/lib/paths_cli/wizard/plugin_registration.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,728 copying build/lib/paths_cli/wizard/plugin_classes.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,731 copying build/lib/paths_cli/wizard/run_module.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,733 copying build/lib/paths_cli/wizard/standard_categories.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,735 copying build/lib/paths_cli/wizard/wizard.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,738 copying build/lib/paths_cli/wizard/pause.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,740 copying build/lib/paths_cli/wizard/helper.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,742 copying build/lib/paths_cli/wizard/engines.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,744 copying build/lib/paths_cli/wizard/tools.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,746 copying build/lib/paths_cli/wizard/shooting.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,748 copying build/lib/paths_cli/wizard/steps.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,750 copying build/lib/paths_cli/wizard/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,752 copying build/lib/paths_cli/wizard/joke.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,754 copying build/lib/paths_cli/wizard/load_from_ops.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,756 copying build/lib/paths_cli/wizard/tps.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,766 copying build/lib/paths_cli/wizard/cvs.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,769 copying build/lib/paths_cli/wizard/core.py -> build/bdist.linux-armv7l/wheel/paths_cli/wizard 2024-08-08T19:42:53,771 copying build/lib/paths_cli/version.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,774 copying build/lib/paths_cli/_installed_version.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,776 copying build/lib/paths_cli/__init__.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,778 copying build/lib/paths_cli/utils.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,780 copying build/lib/paths_cli/cli.py -> build/bdist.linux-armv7l/wheel/paths_cli 2024-08-08T19:42:53,782 running install_egg_info 2024-08-08T19:42:53,814 running egg_info 2024-08-08T19:42:53,841 writing openpathsampling_cli.egg-info/PKG-INFO 2024-08-08T19:42:53,845 writing dependency_links to openpathsampling_cli.egg-info/dependency_links.txt 2024-08-08T19:42:53,847 writing entry points to openpathsampling_cli.egg-info/entry_points.txt 2024-08-08T19:42:53,849 writing requirements to openpathsampling_cli.egg-info/requires.txt 2024-08-08T19:42:53,851 writing top-level names to openpathsampling_cli.egg-info/top_level.txt 2024-08-08T19:42:53,891 reading manifest file 'openpathsampling_cli.egg-info/SOURCES.txt' 2024-08-08T19:42:53,895 adding license file 'LICENSE' 2024-08-08T19:42:53,902 writing manifest file 'openpathsampling_cli.egg-info/SOURCES.txt' 2024-08-08T19:42:53,904 Copying openpathsampling_cli.egg-info to build/bdist.linux-armv7l/wheel/openpathsampling_cli-0.3.1-py3.11.egg-info 2024-08-08T19:42:53,916 running install_scripts 2024-08-08T19:42:53,931 creating build/bdist.linux-armv7l/wheel/openpathsampling_cli-0.3.1.dist-info/WHEEL 2024-08-08T19:42:53,934 creating '/tmp/pip-wheel-r_ot5l_f/openpathsampling_cli-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-08-08T19:42:53,937 adding 'paths_cli/__init__.py' 2024-08-08T19:42:53,939 adding 'paths_cli/_installed_version.py' 2024-08-08T19:42:53,941 adding 'paths_cli/cli.py' 2024-08-08T19:42:53,942 adding 'paths_cli/errors.py' 2024-08-08T19:42:53,944 adding 'paths_cli/file_copying.py' 2024-08-08T19:42:53,946 adding 'paths_cli/param_core.py' 2024-08-08T19:42:53,948 adding 'paths_cli/parameters.py' 2024-08-08T19:42:53,951 adding 'paths_cli/plugin_management.py' 2024-08-08T19:42:53,952 adding 'paths_cli/utils.py' 2024-08-08T19:42:53,954 adding 'paths_cli/version.py' 2024-08-08T19:42:53,956 adding 'paths_cli/commands/__init__.py' 2024-08-08T19:42:53,958 adding 'paths_cli/commands/append.py' 2024-08-08T19:42:53,960 adding 'paths_cli/commands/compile.py' 2024-08-08T19:42:53,961 adding 'paths_cli/commands/contents.py' 2024-08-08T19:42:53,963 adding 'paths_cli/commands/equilibrate.py' 2024-08-08T19:42:53,965 adding 'paths_cli/commands/md.py' 2024-08-08T19:42:53,967 adding 'paths_cli/commands/pathsampling.py' 2024-08-08T19:42:53,968 adding 'paths_cli/commands/visit_all.py' 2024-08-08T19:42:53,970 adding 'paths_cli/commands/wizard.py' 2024-08-08T19:42:53,972 adding 'paths_cli/compat/__init__.py' 2024-08-08T19:42:53,973 adding 'paths_cli/compat/openmm.py' 2024-08-08T19:42:53,975 adding 'paths_cli/compiling/__init__.py' 2024-08-08T19:42:53,978 adding 'paths_cli/compiling/core.py' 2024-08-08T19:42:53,979 adding 'paths_cli/compiling/cvs.py' 2024-08-08T19:42:53,981 adding 'paths_cli/compiling/engines.py' 2024-08-08T19:42:53,983 adding 'paths_cli/compiling/errors.py' 2024-08-08T19:42:53,984 adding 'paths_cli/compiling/gendocs.py' 2024-08-08T19:42:53,986 adding 'paths_cli/compiling/json_type.py' 2024-08-08T19:42:53,987 adding 'paths_cli/compiling/networks.py' 2024-08-08T19:42:53,989 adding 'paths_cli/compiling/plugins.py' 2024-08-08T19:42:53,991 adding 'paths_cli/compiling/root_compiler.py' 2024-08-08T19:42:53,993 adding 'paths_cli/compiling/schemes.py' 2024-08-08T19:42:53,994 adding 'paths_cli/compiling/shooting.py' 2024-08-08T19:42:53,996 adding 'paths_cli/compiling/strategies.py' 2024-08-08T19:42:53,998 adding 'paths_cli/compiling/tools.py' 2024-08-08T19:42:53,999 adding 'paths_cli/compiling/topology.py' 2024-08-08T19:42:54,001 adding 'paths_cli/compiling/volumes.py' 2024-08-08T19:42:54,003 adding 'paths_cli/compiling/_gendocs/__init__.py' 2024-08-08T19:42:54,005 adding 'paths_cli/compiling/_gendocs/config_handler.py' 2024-08-08T19:42:54,007 adding 'paths_cli/compiling/_gendocs/docs_generator.py' 2024-08-08T19:42:54,009 adding 'paths_cli/compiling/_gendocs/json_type_handlers.py' 2024-08-08T19:42:54,011 adding 'paths_cli/tests/__init__.py' 2024-08-08T19:42:54,012 adding 'paths_cli/tests/conftest.py' 2024-08-08T19:42:54,014 adding 'paths_cli/tests/null_command.py' 2024-08-08T19:42:54,016 adding 'paths_cli/tests/test_cli.py' 2024-08-08T19:42:54,018 adding 'paths_cli/tests/test_file_copying.py' 2024-08-08T19:42:54,020 adding 'paths_cli/tests/test_parameters.py' 2024-08-08T19:42:54,022 adding 'paths_cli/tests/test_plugin_management.py' 2024-08-08T19:42:54,024 adding 'paths_cli/tests/test_utils.py' 2024-08-08T19:42:54,025 adding 'paths_cli/tests/utils.py' 2024-08-08T19:42:54,027 adding 'paths_cli/tests/commands/__init__.py' 2024-08-08T19:42:54,029 adding 'paths_cli/tests/commands/conftest.py' 2024-08-08T19:42:54,031 adding 'paths_cli/tests/commands/test_append.py' 2024-08-08T19:42:54,032 adding 'paths_cli/tests/commands/test_compile.py' 2024-08-08T19:42:54,034 adding 'paths_cli/tests/commands/test_contents.py' 2024-08-08T19:42:54,036 adding 'paths_cli/tests/commands/test_equilibrate.py' 2024-08-08T19:42:54,038 adding 'paths_cli/tests/commands/test_md.py' 2024-08-08T19:42:54,039 adding 'paths_cli/tests/commands/test_pathsampling.py' 2024-08-08T19:42:54,041 adding 'paths_cli/tests/commands/test_visit_all.py' 2024-08-08T19:42:54,042 adding 'paths_cli/tests/commands/utils.py' 2024-08-08T19:42:54,044 adding 'paths_cli/tests/compiling/__init__.py' 2024-08-08T19:42:54,046 adding 'paths_cli/tests/compiling/test_core.py' 2024-08-08T19:42:54,047 adding 'paths_cli/tests/compiling/test_cvs.py' 2024-08-08T19:42:54,049 adding 'paths_cli/tests/compiling/test_engines.py' 2024-08-08T19:42:54,050 adding 'paths_cli/tests/compiling/test_gendocs.py' 2024-08-08T19:42:54,051 adding 'paths_cli/tests/compiling/test_networks.py' 2024-08-08T19:42:54,053 adding 'paths_cli/tests/compiling/test_plugins.py' 2024-08-08T19:42:54,054 adding 'paths_cli/tests/compiling/test_root_compiler.py' 2024-08-08T19:42:54,056 adding 'paths_cli/tests/compiling/test_schemes.py' 2024-08-08T19:42:54,057 adding 'paths_cli/tests/compiling/test_shooting.py' 2024-08-08T19:42:54,059 adding 'paths_cli/tests/compiling/test_tools.py' 2024-08-08T19:42:54,060 adding 'paths_cli/tests/compiling/test_topology.py' 2024-08-08T19:42:54,061 adding 'paths_cli/tests/compiling/test_volumes.py' 2024-08-08T19:42:54,062 adding 'paths_cli/tests/compiling/utils.py' 2024-08-08T19:42:54,064 adding 'paths_cli/tests/wizard/__init__.py' 2024-08-08T19:42:54,065 adding 'paths_cli/tests/wizard/conftest.py' 2024-08-08T19:42:54,067 adding 'paths_cli/tests/wizard/mock_wizard.py' 2024-08-08T19:42:54,068 adding 'paths_cli/tests/wizard/test_core.py' 2024-08-08T19:42:54,069 adding 'paths_cli/tests/wizard/test_cvs.py' 2024-08-08T19:42:54,071 adding 'paths_cli/tests/wizard/test_errors.py' 2024-08-08T19:42:54,072 adding 'paths_cli/tests/wizard/test_helper.py' 2024-08-08T19:42:54,073 adding 'paths_cli/tests/wizard/test_load_from_ops.py' 2024-08-08T19:42:54,074 adding 'paths_cli/tests/wizard/test_openmm.py' 2024-08-08T19:42:54,076 adding 'paths_cli/tests/wizard/test_parameters.py' 2024-08-08T19:42:54,077 adding 'paths_cli/tests/wizard/test_pause.py' 2024-08-08T19:42:54,079 adding 'paths_cli/tests/wizard/test_plugin_classes.py' 2024-08-08T19:42:54,081 adding 'paths_cli/tests/wizard/test_plugin_registration.py' 2024-08-08T19:42:54,082 adding 'paths_cli/tests/wizard/test_shooting.py' 2024-08-08T19:42:54,083 adding 'paths_cli/tests/wizard/test_standard_categories.py' 2024-08-08T19:42:54,084 adding 'paths_cli/tests/wizard/test_tools.py' 2024-08-08T19:42:54,086 adding 'paths_cli/tests/wizard/test_tps.py' 2024-08-08T19:42:54,087 adding 'paths_cli/tests/wizard/test_two_state_tps.py' 2024-08-08T19:42:54,088 adding 'paths_cli/tests/wizard/test_volumes.py' 2024-08-08T19:42:54,090 adding 'paths_cli/tests/wizard/test_wizard.py' 2024-08-08T19:42:54,092 adding 'paths_cli/wizard/__init__.py' 2024-08-08T19:42:54,093 adding 'paths_cli/wizard/core.py' 2024-08-08T19:42:54,095 adding 'paths_cli/wizard/cvs.py' 2024-08-08T19:42:54,096 adding 'paths_cli/wizard/engines.py' 2024-08-08T19:42:54,098 adding 'paths_cli/wizard/errors.py' 2024-08-08T19:42:54,099 adding 'paths_cli/wizard/helper.py' 2024-08-08T19:42:54,101 adding 'paths_cli/wizard/joke.py' 2024-08-08T19:42:54,102 adding 'paths_cli/wizard/load_from_ops.py' 2024-08-08T19:42:54,103 adding 'paths_cli/wizard/openmm.py' 2024-08-08T19:42:54,105 adding 'paths_cli/wizard/parameters.py' 2024-08-08T19:42:54,106 adding 'paths_cli/wizard/pause.py' 2024-08-08T19:42:54,108 adding 'paths_cli/wizard/plugin_classes.py' 2024-08-08T19:42:54,110 adding 'paths_cli/wizard/plugin_registration.py' 2024-08-08T19:42:54,111 adding 'paths_cli/wizard/run_module.py' 2024-08-08T19:42:54,112 adding 'paths_cli/wizard/shooting.py' 2024-08-08T19:42:54,114 adding 'paths_cli/wizard/standard_categories.py' 2024-08-08T19:42:54,115 adding 'paths_cli/wizard/steps.py' 2024-08-08T19:42:54,116 adding 'paths_cli/wizard/tools.py' 2024-08-08T19:42:54,117 adding 'paths_cli/wizard/tps.py' 2024-08-08T19:42:54,119 adding 'paths_cli/wizard/two_state_tps.py' 2024-08-08T19:42:54,120 adding 'paths_cli/wizard/volumes.py' 2024-08-08T19:42:54,122 adding 'paths_cli/wizard/wizard.py' 2024-08-08T19:42:54,124 adding 'openpathsampling_cli-0.3.1.dist-info/LICENSE' 2024-08-08T19:42:54,125 adding 'openpathsampling_cli-0.3.1.dist-info/METADATA' 2024-08-08T19:42:54,126 adding 'openpathsampling_cli-0.3.1.dist-info/WHEEL' 2024-08-08T19:42:54,127 adding 'openpathsampling_cli-0.3.1.dist-info/entry_points.txt' 2024-08-08T19:42:54,128 adding 'openpathsampling_cli-0.3.1.dist-info/top_level.txt' 2024-08-08T19:42:54,130 adding 'openpathsampling_cli-0.3.1.dist-info/RECORD' 2024-08-08T19:42:54,134 removing build/bdist.linux-armv7l/wheel 2024-08-08T19:42:54,279 Building wheel for openpathsampling-cli (setup.py): finished with status 'done' 2024-08-08T19:42:54,283 Created wheel for openpathsampling-cli: filename=openpathsampling_cli-0.3.1-py3-none-any.whl size=140604 sha256=6677c4a7c0034a51005a1a6ceae915c7e82e7acd514810457a22827789989686 2024-08-08T19:42:54,284 Stored in directory: /tmp/pip-ephem-wheel-cache-uaklgmfu/wheels/fe/43/80/916e6c6620468d301068db20fbfdeccec49fdba484ca985f99 2024-08-08T19:42:54,298 Successfully built openpathsampling-cli 2024-08-08T19:42:54,305 Removed build tracker: '/tmp/pip-build-tracker-u_5ybcm1'