2024-08-27T07:09:49,879 Created temporary directory: /tmp/pip-build-tracker-qn8slunl 2024-08-27T07:09:49,880 Initialized build tracking at /tmp/pip-build-tracker-qn8slunl 2024-08-27T07:09:49,880 Created build tracker: /tmp/pip-build-tracker-qn8slunl 2024-08-27T07:09:49,881 Entered build tracker: /tmp/pip-build-tracker-qn8slunl 2024-08-27T07:09:49,881 Created temporary directory: /tmp/pip-wheel-yktxx2bz 2024-08-27T07:09:49,885 Created temporary directory: /tmp/pip-ephem-wheel-cache-1otg_r_x 2024-08-27T07:09:49,928 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-08-27T07:09:49,931 2 location(s) to search for versions of nextflow: 2024-08-27T07:09:49,931 * https://pypi.org/simple/nextflow/ 2024-08-27T07:09:49,931 * https://www.piwheels.org/simple/nextflow/ 2024-08-27T07:09:49,932 Fetching project page and analyzing links: https://pypi.org/simple/nextflow/ 2024-08-27T07:09:49,933 Getting page https://pypi.org/simple/nextflow/ 2024-08-27T07:09:49,934 Found index url https://pypi.org/simple/ 2024-08-27T07:09:50,151 Fetched page https://pypi.org/simple/nextflow/ as application/vnd.pypi.simple.v1+json 2024-08-27T07:09:50,156 Found link https://files.pythonhosted.org/packages/d9/3d/162f93ee2c674b19e07782850b8e1044168c3615a9e3e3a9a2d75ad45e8a/nextflow-22.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.1 2024-08-27T07:09:50,157 Found link https://files.pythonhosted.org/packages/0b/00/f6d3c8d84864605147aa79ec17f763fd394f9cfaded672101e3d07bc0345/nextflow-22.10.6.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.6 2024-08-27T07:09:50,158 Found link https://files.pythonhosted.org/packages/f5/e8/e0882a1aad0b30b3ac760ae69914ffe986706f12d6539a1c0a08759d0e2b/nextflow-22.10.7.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.7 2024-08-27T07:09:50,159 Found link https://files.pythonhosted.org/packages/d5/eb/d7cd6b33724ea6c37f8dfd4ed4354a06ed66e8a87bb6c50cca26afa3d210/nextflow-23.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.1 2024-08-27T07:09:50,159 Found link https://files.pythonhosted.org/packages/77/eb/6f5e7d09188ac1fedc1b20c5bb3c679302cda22398c49682f8f3213565db/nextflow-23.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.2 2024-08-27T07:09:50,160 Found link https://files.pythonhosted.org/packages/37/0f/cd4e2d76402ebd60994753df846a4581fe1cd2c5c8ecfad4a0758328edf9/nextflow-23.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.3 2024-08-27T07:09:50,161 Found link https://files.pythonhosted.org/packages/7f/a1/ef4e714fdc8de1cf27f285565feea47eec4c85b96fc9063a07fe8215ef83/nextflow-23.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.4 2024-08-27T07:09:50,162 Found link https://files.pythonhosted.org/packages/5d/28/eb02b1a65c49e3b2dffd9d42e711e0544ee9db637cd4ca43b0c1a64e0eb4/nextflow-23.10.0.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.0 2024-08-27T07:09:50,163 Found link https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.1 2024-08-27T07:09:50,164 Found link https://files.pythonhosted.org/packages/c4/9b/9cfb11bf3e9f51644b177c1ef2c635b11e96aedea5a40fd5839d197de7bd/nextflow-24.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.1 2024-08-27T07:09:50,165 Found link https://files.pythonhosted.org/packages/e3/bd/c2bbb7c09b5c88d1521f40025c5ddec825b5c789f374242afbffba08c84b/nextflow-24.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.2 2024-08-27T07:09:50,166 Found link https://files.pythonhosted.org/packages/5d/f7/65b3d0d6efa2d1dc0a74295b0bafac940349fb553ff77aecc2b19341206c/nextflow-24.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.3 2024-08-27T07:09:50,167 Found link https://files.pythonhosted.org/packages/0e/b6/cecfb82e6f67273377507d12df3bed4ac8ddc31a5761c98ce8ab3edf4454/nextflow-24.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 24.4.4 2024-08-27T07:09:50,168 Fetching project page and analyzing links: https://www.piwheels.org/simple/nextflow/ 2024-08-27T07:09:50,169 Getting page https://www.piwheels.org/simple/nextflow/ 2024-08-27T07:09:50,171 Found index url https://www.piwheels.org/simple/ 2024-08-27T07:09:50,382 Fetched page https://www.piwheels.org/simple/nextflow/ as text/html 2024-08-27T07:09:50,387 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.3-py3-none-any.whl#sha256=939e5cec991c7e0aa855382e5080b22a5a6d4e29ea2fe78489bc82c8efd54618 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,387 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.2-py3-none-any.whl#sha256=e7fec3dff6b4f186a445cb5cfc249c17ac0391558a134e26af1ff85c0e55d3ba (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,388 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-24.4.1-py3-none-any.whl#sha256=de56fffc2db65488a1756d1230de2fdf75ce97d44ab44bd42e5dcd0587b13987 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,388 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.1-py3-none-any.whl#sha256=81573f00e62309b377e56977d79c506407a4283adeb34ab3ccf025ee1b840b79 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,389 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.0-py3-none-any.whl#sha256=7d68961906a1c33d39660746da229605ecefc580b066c8458ebebf96e563549d (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,389 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.4-py3-none-any.whl#sha256=07d049d85a7b1f1772982e66a45e970378c1b3e4a0aa11e94bff54eea2facfaf (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,390 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.3-py3-none-any.whl#sha256=1d2114b09aec49a7701bb1480ca7ce83e23acd47cdb495a709384efc2a525948 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,390 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.2-py3-none-any.whl#sha256=2056f24035f07ee610923e7a8ec19e52b141789365e337ccf71e27a365a68ce6 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,391 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.1-py3-none-any.whl#sha256=c07e0059e657c9519b9cc0b41d127157c166bf9116bacb750aa5fbf8ef9e9a55 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,391 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.7-py3-none-any.whl#sha256=bd32f54d735936e85cc14b26070f88d5b86f2fda68079680e58d5dcd6472ecdd (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,392 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.6-py3-none-any.whl#sha256=10d80820a116271df8dd0c21f0373823dbf31f40715ebb305d3b85d49f39ad72 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,393 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.1-py3-none-any.whl#sha256=746fe26a0a4083913632e05683071cc2fe41d7780835714a38c1d44116ff9073 (from https://www.piwheels.org/simple/nextflow/) 2024-08-27T07:09:50,393 Skipping link: not a file: https://www.piwheels.org/simple/nextflow/ 2024-08-27T07:09:50,394 Skipping link: not a file: https://pypi.org/simple/nextflow/ 2024-08-27T07:09:50,412 Given no hashes to check 1 links for project 'nextflow': discarding no candidates 2024-08-27T07:09:50,414 Collecting nextflow==24.4.4 2024-08-27T07:09:50,417 Created temporary directory: /tmp/pip-unpack-ye6e56ws 2024-08-27T07:09:50,550 Downloading nextflow-24.4.4.tar.gz (7.3 kB) 2024-08-27T07:09:50,577 Added nextflow==24.4.4 from https://files.pythonhosted.org/packages/0e/b6/cecfb82e6f67273377507d12df3bed4ac8ddc31a5761c98ce8ab3edf4454/nextflow-24.4.4.tar.gz to build tracker '/tmp/pip-build-tracker-qn8slunl' 2024-08-27T07:09:50,579 Running setup.py (path:/tmp/pip-wheel-yktxx2bz/nextflow_0888014bac80428c838d888d9f2fa03b/setup.py) egg_info for package nextflow 2024-08-27T07:09:50,580 Created temporary directory: /tmp/pip-pip-egg-info-ts78327t 2024-08-27T07:09:50,580 Preparing metadata (setup.py): started 2024-08-27T07:09:50,582 Running command python setup.py egg_info 2024-08-27T07:09:51,881 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:289: InformationOnly: Normalizing '24.04.4' to '24.4.4' 2024-08-27T07:09:51,881 self.metadata.version = self._normalize_version(self.metadata.version) 2024-08-27T07:09:51,927 running egg_info 2024-08-27T07:09:51,929 creating /tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info 2024-08-27T07:09:51,956 writing /tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/PKG-INFO 2024-08-27T07:09:51,959 writing dependency_links to /tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/dependency_links.txt 2024-08-27T07:09:51,961 writing top-level names to /tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/top_level.txt 2024-08-27T07:09:51,962 writing manifest file '/tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/SOURCES.txt' 2024-08-27T07:09:52,043 reading manifest file '/tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/SOURCES.txt' 2024-08-27T07:09:52,046 writing manifest file '/tmp/pip-pip-egg-info-ts78327t/nextflow.egg-info/SOURCES.txt' 2024-08-27T07:09:52,157 Preparing metadata (setup.py): finished with status 'done' 2024-08-27T07:09:52,161 Source in /tmp/pip-wheel-yktxx2bz/nextflow_0888014bac80428c838d888d9f2fa03b has version 24.4.4, which satisfies requirement nextflow==24.4.4 from https://files.pythonhosted.org/packages/0e/b6/cecfb82e6f67273377507d12df3bed4ac8ddc31a5761c98ce8ab3edf4454/nextflow-24.4.4.tar.gz 2024-08-27T07:09:52,162 Removed nextflow==24.4.4 from https://files.pythonhosted.org/packages/0e/b6/cecfb82e6f67273377507d12df3bed4ac8ddc31a5761c98ce8ab3edf4454/nextflow-24.4.4.tar.gz from build tracker '/tmp/pip-build-tracker-qn8slunl' 2024-08-27T07:09:52,166 Created temporary directory: /tmp/pip-unpack-a8u_uta7 2024-08-27T07:09:52,167 Created temporary directory: /tmp/pip-unpack-fouw3afp 2024-08-27T07:09:52,167 Building wheels for collected packages: nextflow 2024-08-27T07:09:52,171 Created temporary directory: /tmp/pip-wheel-yrt8a8ye 2024-08-27T07:09:52,172 Building wheel for nextflow (setup.py): started 2024-08-27T07:09:52,173 Destination directory: /tmp/pip-wheel-yrt8a8ye 2024-08-27T07:09:52,174 Running command python setup.py bdist_wheel 2024-08-27T07:09:53,232 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:289: InformationOnly: Normalizing '24.04.4' to '24.4.4' 2024-08-27T07:09:53,233 self.metadata.version = self._normalize_version(self.metadata.version) 2024-08-27T07:09:53,244 running bdist_wheel 2024-08-27T07:09:53,379 running build 2024-08-27T07:09:53,380 running build_scripts 2024-08-27T07:09:53,380 creating build 2024-08-27T07:09:53,381 creating build/scripts-3.11 2024-08-27T07:09:53,382 copying launcher/nextflow -> build/scripts-3.11 2024-08-27T07:09:53,384 changing mode of build/scripts-3.11/nextflow from 644 to 755 2024-08-27T07:09:53,412 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-08-27T07:09:53,413 !! 2024-08-27T07:09:53,414 ******************************************************************************** 2024-08-27T07:09:53,414 Please avoid running ``setup.py`` directly. 2024-08-27T07:09:53,415 Instead, use pypa/build, pypa/installer or other 2024-08-27T07:09:53,415 standards-based tools. 2024-08-27T07:09:53,417 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-08-27T07:09:53,417 ******************************************************************************** 2024-08-27T07:09:53,419 !! 2024-08-27T07:09:53,419 self.initialize_options() 2024-08-27T07:09:53,440 installing to build/bdist.linux-armv7l/wheel 2024-08-27T07:09:53,441 running install 2024-08-27T07:09:53,465 running install_egg_info 2024-08-27T07:09:53,522 running egg_info 2024-08-27T07:09:53,547 writing nextflow.egg-info/PKG-INFO 2024-08-27T07:09:53,550 writing dependency_links to nextflow.egg-info/dependency_links.txt 2024-08-27T07:09:53,552 writing top-level names to nextflow.egg-info/top_level.txt 2024-08-27T07:09:53,580 reading manifest file 'nextflow.egg-info/SOURCES.txt' 2024-08-27T07:09:53,586 writing manifest file 'nextflow.egg-info/SOURCES.txt' 2024-08-27T07:09:53,588 Copying nextflow.egg-info to build/bdist.linux-armv7l/wheel/./nextflow-24.4.4-py3.11.egg-info 2024-08-27T07:09:53,596 running install_scripts 2024-08-27T07:09:53,597 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.4.data 2024-08-27T07:09:53,597 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.4.data/scripts 2024-08-27T07:09:53,598 copying build/scripts-3.11/nextflow -> build/bdist.linux-armv7l/wheel/nextflow-24.4.4.data/scripts 2024-08-27T07:09:53,600 changing mode of build/bdist.linux-armv7l/wheel/nextflow-24.4.4.data/scripts/nextflow to 755 2024-08-27T07:09:53,610 creating build/bdist.linux-armv7l/wheel/nextflow-24.4.4.dist-info/WHEEL 2024-08-27T07:09:53,612 creating '/tmp/pip-wheel-yrt8a8ye/nextflow-24.4.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-08-27T07:09:53,616 adding 'nextflow-24.4.4.data/scripts/nextflow' 2024-08-27T07:09:53,618 adding 'nextflow-24.4.4.dist-info/METADATA' 2024-08-27T07:09:53,619 adding 'nextflow-24.4.4.dist-info/WHEEL' 2024-08-27T07:09:53,620 adding 'nextflow-24.4.4.dist-info/top_level.txt' 2024-08-27T07:09:53,620 adding 'nextflow-24.4.4.dist-info/RECORD' 2024-08-27T07:09:53,621 removing build/bdist.linux-armv7l/wheel 2024-08-27T07:09:53,738 Building wheel for nextflow (setup.py): finished with status 'done' 2024-08-27T07:09:53,740 Created wheel for nextflow: filename=nextflow-24.4.4-py3-none-any.whl size=7414 sha256=dd8afff5397e3bd0f6f7bb2f50680177e7b244eb90f9b176391034e9ac648894 2024-08-27T07:09:53,742 Stored in directory: /tmp/pip-ephem-wheel-cache-1otg_r_x/wheels/2a/3d/30/d108e79640fb97ceb1433108dbb3f5daa1516d451cc1b5f83d 2024-08-27T07:09:53,750 Successfully built nextflow 2024-08-27T07:09:53,753 Removed build tracker: '/tmp/pip-build-tracker-qn8slunl'