2024-09-13T06:19:14,895 Created temporary directory: /tmp/pip-build-tracker-em751phx 2024-09-13T06:19:14,896 Initialized build tracking at /tmp/pip-build-tracker-em751phx 2024-09-13T06:19:14,897 Created build tracker: /tmp/pip-build-tracker-em751phx 2024-09-13T06:19:14,897 Entered build tracker: /tmp/pip-build-tracker-em751phx 2024-09-13T06:19:14,898 Created temporary directory: /tmp/pip-wheel-ai7jd4wx 2024-09-13T06:19:14,902 Created temporary directory: /tmp/pip-ephem-wheel-cache-4yucq3qz 2024-09-13T06:19:14,946 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-09-13T06:19:14,949 2 location(s) to search for versions of chrori: 2024-09-13T06:19:14,949 * https://pypi.org/simple/chrori/ 2024-09-13T06:19:14,949 * https://www.piwheels.org/simple/chrori/ 2024-09-13T06:19:14,950 Fetching project page and analyzing links: https://pypi.org/simple/chrori/ 2024-09-13T06:19:14,951 Getting page https://pypi.org/simple/chrori/ 2024-09-13T06:19:14,952 Found index url https://pypi.org/simple/ 2024-09-13T06:19:15,162 Fetched page https://pypi.org/simple/chrori/ as application/vnd.pypi.simple.v1+json 2024-09-13T06:19:15,164 Skipping link: No binaries permitted for chrori: https://files.pythonhosted.org/packages/bb/89/952abdcee3d3740aa415890c0d7a48a25ade5ad37736376b0b9149652576/chrori-0.0.1-py3-none-any.whl (from https://pypi.org/simple/chrori/) 2024-09-13T06:19:15,164 Found link https://files.pythonhosted.org/packages/48/2d/4dceb33a929db257fc05384eea20a0db63296449ff9f40a8f61ccfdcd265/chrori-0.0.1.tar.gz (from https://pypi.org/simple/chrori/), version: 0.0.1 2024-09-13T06:19:15,165 Fetching project page and analyzing links: https://www.piwheels.org/simple/chrori/ 2024-09-13T06:19:15,165 Getting page https://www.piwheels.org/simple/chrori/ 2024-09-13T06:19:15,167 Found index url https://www.piwheels.org/simple/ 2024-09-13T06:19:15,320 Fetched page https://www.piwheels.org/simple/chrori/ as text/html 2024-09-13T06:19:15,322 Skipping link: not a file: https://www.piwheels.org/simple/chrori/ 2024-09-13T06:19:15,322 Skipping link: not a file: https://pypi.org/simple/chrori/ 2024-09-13T06:19:15,341 Given no hashes to check 1 links for project 'chrori': discarding no candidates 2024-09-13T06:19:15,343 Collecting chrori==0.0.1 2024-09-13T06:19:15,345 Created temporary directory: /tmp/pip-unpack-xjzxyq1o 2024-09-13T06:19:15,553 Downloading chrori-0.0.1.tar.gz (10 kB) 2024-09-13T06:19:15,598 Added chrori==0.0.1 from https://files.pythonhosted.org/packages/48/2d/4dceb33a929db257fc05384eea20a0db63296449ff9f40a8f61ccfdcd265/chrori-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-em751phx' 2024-09-13T06:19:15,600 Running setup.py (path:/tmp/pip-wheel-ai7jd4wx/chrori_609a272cf2524916b7a2a41c9f64f5ff/setup.py) egg_info for package chrori 2024-09-13T06:19:15,601 Created temporary directory: /tmp/pip-pip-egg-info-5paqbeup 2024-09-13T06:19:15,602 Preparing metadata (setup.py): started 2024-09-13T06:19:15,603 Running command python setup.py egg_info 2024-09-13T06:19:16,755 running egg_info 2024-09-13T06:19:16,757 creating /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info 2024-09-13T06:19:16,784 writing /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/PKG-INFO 2024-09-13T06:19:16,787 writing dependency_links to /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/dependency_links.txt 2024-09-13T06:19:16,789 writing entry points to /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/entry_points.txt 2024-09-13T06:19:16,790 writing requirements to /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/requires.txt 2024-09-13T06:19:16,791 writing top-level names to /tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/top_level.txt 2024-09-13T06:19:16,793 writing manifest file '/tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/SOURCES.txt' 2024-09-13T06:19:16,880 reading manifest file '/tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/SOURCES.txt' 2024-09-13T06:19:16,881 reading manifest template 'MANIFEST.in' 2024-09-13T06:19:16,882 adding license file 'LICENSE' 2024-09-13T06:19:16,884 writing manifest file '/tmp/pip-pip-egg-info-5paqbeup/chrori.egg-info/SOURCES.txt' 2024-09-13T06:19:16,994 Preparing metadata (setup.py): finished with status 'done' 2024-09-13T06:19:16,999 Source in /tmp/pip-wheel-ai7jd4wx/chrori_609a272cf2524916b7a2a41c9f64f5ff has version 0.0.1, which satisfies requirement chrori==0.0.1 from https://files.pythonhosted.org/packages/48/2d/4dceb33a929db257fc05384eea20a0db63296449ff9f40a8f61ccfdcd265/chrori-0.0.1.tar.gz 2024-09-13T06:19:17,000 Removed chrori==0.0.1 from https://files.pythonhosted.org/packages/48/2d/4dceb33a929db257fc05384eea20a0db63296449ff9f40a8f61ccfdcd265/chrori-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-em751phx' 2024-09-13T06:19:17,004 Created temporary directory: /tmp/pip-unpack-z13sufsi 2024-09-13T06:19:17,005 Created temporary directory: /tmp/pip-unpack-oichr1zn 2024-09-13T06:19:17,005 Building wheels for collected packages: chrori 2024-09-13T06:19:17,009 Created temporary directory: /tmp/pip-wheel-35bkby2i 2024-09-13T06:19:17,010 Building wheel for chrori (setup.py): started 2024-09-13T06:19:17,011 Destination directory: /tmp/pip-wheel-35bkby2i 2024-09-13T06:19:17,012 Running command python setup.py bdist_wheel 2024-09-13T06:19:18,065 running bdist_wheel 2024-09-13T06:19:18,209 running build 2024-09-13T06:19:18,210 running build_py 2024-09-13T06:19:18,242 creating build 2024-09-13T06:19:18,243 creating build/lib 2024-09-13T06:19:18,244 creating build/lib/chrori 2024-09-13T06:19:18,245 copying chrori/haplocall.py -> build/lib/chrori 2024-09-13T06:19:18,248 copying chrori/__init__.py -> build/lib/chrori 2024-09-13T06:19:18,249 copying chrori/selectvariants.py -> build/lib/chrori 2024-09-13T06:19:18,252 copying chrori/params.py -> build/lib/chrori 2024-09-13T06:19:18,254 copying chrori/utils.py -> build/lib/chrori 2024-09-13T06:19:18,256 copying chrori/mkvcf.py -> build/lib/chrori 2024-09-13T06:19:18,258 copying chrori/visualize.py -> build/lib/chrori 2024-09-13T06:19:18,260 copying chrori/mergevcf.py -> build/lib/chrori 2024-09-13T06:19:18,262 copying chrori/refindex.py -> build/lib/chrori 2024-09-13T06:19:18,293 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-09-13T06:19:18,293 !! 2024-09-13T06:19:18,295 ******************************************************************************** 2024-09-13T06:19:18,295 Please avoid running ``setup.py`` directly. 2024-09-13T06:19:18,295 Instead, use pypa/build, pypa/installer or other 2024-09-13T06:19:18,296 standards-based tools. 2024-09-13T06:19:18,297 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-09-13T06:19:18,298 ******************************************************************************** 2024-09-13T06:19:18,299 !! 2024-09-13T06:19:18,299 self.initialize_options() 2024-09-13T06:19:18,322 installing to build/bdist.linux-armv7l/wheel 2024-09-13T06:19:18,322 running install 2024-09-13T06:19:18,346 running install_lib 2024-09-13T06:19:18,374 creating build/bdist.linux-armv7l 2024-09-13T06:19:18,375 creating build/bdist.linux-armv7l/wheel 2024-09-13T06:19:18,377 creating build/bdist.linux-armv7l/wheel/chrori 2024-09-13T06:19:18,378 copying build/lib/chrori/haplocall.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,380 copying build/lib/chrori/__init__.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,382 copying build/lib/chrori/selectvariants.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,385 copying build/lib/chrori/params.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,387 copying build/lib/chrori/utils.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,389 copying build/lib/chrori/mkvcf.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,391 copying build/lib/chrori/visualize.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,393 copying build/lib/chrori/mergevcf.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,395 copying build/lib/chrori/refindex.py -> build/bdist.linux-armv7l/wheel/./chrori 2024-09-13T06:19:18,397 running install_egg_info 2024-09-13T06:19:18,430 running egg_info 2024-09-13T06:19:18,456 writing chrori.egg-info/PKG-INFO 2024-09-13T06:19:18,459 writing dependency_links to chrori.egg-info/dependency_links.txt 2024-09-13T06:19:18,460 writing entry points to chrori.egg-info/entry_points.txt 2024-09-13T06:19:18,462 writing requirements to chrori.egg-info/requires.txt 2024-09-13T06:19:18,463 writing top-level names to chrori.egg-info/top_level.txt 2024-09-13T06:19:18,492 reading manifest file 'chrori.egg-info/SOURCES.txt' 2024-09-13T06:19:18,495 reading manifest template 'MANIFEST.in' 2024-09-13T06:19:18,496 adding license file 'LICENSE' 2024-09-13T06:19:18,498 writing manifest file 'chrori.egg-info/SOURCES.txt' 2024-09-13T06:19:18,499 Copying chrori.egg-info to build/bdist.linux-armv7l/wheel/./chrori-0.0.1-py3.11.egg-info 2024-09-13T06:19:18,510 running install_scripts 2024-09-13T06:19:18,526 creating build/bdist.linux-armv7l/wheel/chrori-0.0.1.dist-info/WHEEL 2024-09-13T06:19:18,528 creating '/tmp/pip-wheel-35bkby2i/chrori-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-09-13T06:19:18,531 adding 'chrori/__init__.py' 2024-09-13T06:19:18,532 adding 'chrori/haplocall.py' 2024-09-13T06:19:18,533 adding 'chrori/mergevcf.py' 2024-09-13T06:19:18,535 adding 'chrori/mkvcf.py' 2024-09-13T06:19:18,536 adding 'chrori/params.py' 2024-09-13T06:19:18,538 adding 'chrori/refindex.py' 2024-09-13T06:19:18,539 adding 'chrori/selectvariants.py' 2024-09-13T06:19:18,540 adding 'chrori/utils.py' 2024-09-13T06:19:18,542 adding 'chrori/visualize.py' 2024-09-13T06:19:18,544 adding 'chrori-0.0.1.dist-info/LICENSE' 2024-09-13T06:19:18,545 adding 'chrori-0.0.1.dist-info/METADATA' 2024-09-13T06:19:18,546 adding 'chrori-0.0.1.dist-info/WHEEL' 2024-09-13T06:19:18,547 adding 'chrori-0.0.1.dist-info/entry_points.txt' 2024-09-13T06:19:18,548 adding 'chrori-0.0.1.dist-info/top_level.txt' 2024-09-13T06:19:18,549 adding 'chrori-0.0.1.dist-info/RECORD' 2024-09-13T06:19:18,550 removing build/bdist.linux-armv7l/wheel 2024-09-13T06:19:18,666 Building wheel for chrori (setup.py): finished with status 'done' 2024-09-13T06:19:18,669 Created wheel for chrori: filename=chrori-0.0.1-py3-none-any.whl size=13301 sha256=c60469a9510fe7d9ed39b439b6e94edcf20e2510a668cc484144e0d8c956a390 2024-09-13T06:19:18,670 Stored in directory: /tmp/pip-ephem-wheel-cache-4yucq3qz/wheels/2c/79/a6/87b451abd0a26bb1fdec4f65d854d20dbb7684506e78cb0d04 2024-09-13T06:19:18,679 Successfully built chrori 2024-09-13T06:19:18,683 Removed build tracker: '/tmp/pip-build-tracker-em751phx'