2024-09-14T14:21:10,764 Created temporary directory: /tmp/pip-build-tracker-729z9y8x 2024-09-14T14:21:10,765 Initialized build tracking at /tmp/pip-build-tracker-729z9y8x 2024-09-14T14:21:10,765 Created build tracker: /tmp/pip-build-tracker-729z9y8x 2024-09-14T14:21:10,766 Entered build tracker: /tmp/pip-build-tracker-729z9y8x 2024-09-14T14:21:10,767 Created temporary directory: /tmp/pip-wheel-yc2dja04 2024-09-14T14:21:10,770 Created temporary directory: /tmp/pip-ephem-wheel-cache-_pttkg2v 2024-09-14T14:21:10,814 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-09-14T14:21:10,817 2 location(s) to search for versions of mantis-xray: 2024-09-14T14:21:10,817 * https://pypi.org/simple/mantis-xray/ 2024-09-14T14:21:10,817 * https://www.piwheels.org/simple/mantis-xray/ 2024-09-14T14:21:10,818 Fetching project page and analyzing links: https://pypi.org/simple/mantis-xray/ 2024-09-14T14:21:10,819 Getting page https://pypi.org/simple/mantis-xray/ 2024-09-14T14:21:10,820 Found index url https://pypi.org/simple/ 2024-09-14T14:21:11,032 Fetched page https://pypi.org/simple/mantis-xray/ as application/vnd.pypi.simple.v1+json 2024-09-14T14:21:11,038 Found link https://files.pythonhosted.org/packages/6b/60/8e7896c931772aa55b703c7df072b6c619cd692a41219f3c61f64feb981e/mantis-xray-3.0.11.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.0.11 2024-09-14T14:21:11,039 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/b6/e6/9b7b126427fba8625d20e0d7002beafcf3ab876150564684de88f3538f29/mantis_xray-3.0.11-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,040 Found link https://files.pythonhosted.org/packages/85/e1/6f91b01092324b4c82dbf6bfbede0d97500bd6f416d343451d4d8754f63c/mantis-xray-3.1.3.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.3 2024-09-14T14:21:11,041 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/26/6c/ba0f56062e4b286944650ce0ce49337b1618d64c46da74dc21f5ce55158a/mantis_xray-3.1.3-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,042 Found link https://files.pythonhosted.org/packages/e9/81/b4539e5e3032cacf58fe2d5a1ea9f55fcef5ac41e923862be24891ee7e61/mantis-xray-3.1.4.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.4 2024-09-14T14:21:11,042 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/e8/bf/ca9b896445982232ad810f9fd3c2df1d81883d10c3494dabda0702b248a9/mantis_xray-3.1.4-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,043 Found link https://files.pythonhosted.org/packages/bb/a2/3e064df48ac8618ba649340d41de97f827ce7b4b75ad5f9c0e91d5e7c21d/mantis-xray-3.1.6.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.6 2024-09-14T14:21:11,044 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/87/7b/e19d1b5a866b141d6a0ba114115984a5485ed9d1836b5f6bf65f9343679a/mantis_xray-3.1.6-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,045 Found link https://files.pythonhosted.org/packages/cf/41/6eb4d9a3f2bb54b0a2daf847328af3b513112c1e84e1ed7019330efd9c2e/mantis-xray-3.1.7.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.7 2024-09-14T14:21:11,046 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/e3/94/4807b8283630601539206d0b0f7835d6bfb9df58a501ea38f9d7d46c0fbc/mantis_xray-3.1.7-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,047 Found link https://files.pythonhosted.org/packages/a8/71/7daef9e8a3eb894b500da4c2be0cd7aca427ed3b35f530d99585be2d71f1/mantis-xray-3.1.9.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.9 2024-09-14T14:21:11,047 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/74/75/8328e4a55241d8d1963fdd0d773f1e93491124703c29390614b1a046705c/mantis_xray-3.1.9-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,048 Found link https://files.pythonhosted.org/packages/1b/2a/f37ff8eff79a30bbc5a1a7ab42ebc87a82ab185de29b026eac167ffa9149/mantis-xray-3.1.10.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.10 2024-09-14T14:21:11,049 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/ab/78/2405e64e9a99096fc9d89c63760d70b9df2b50e6a7ef9e8112e31a8578aa/mantis_xray-3.1.10-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,050 Found link https://files.pythonhosted.org/packages/40/f2/f0a31be70882bb1ae4d51a1f7534f1c34283d519552ec898a6d6dff6c25f/mantis-xray-3.1.11.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.11 2024-09-14T14:21:11,050 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/49/99/49835b104666bb882097d7fb34c713cb268188d59ad52c508fbabbbcba23/mantis_xray-3.1.11-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,051 Found link https://files.pythonhosted.org/packages/44/7c/847b05b75a7e49a15f340c931b4499de0d69f3f78a514a8b35627a579e9b/mantis-xray-3.1.12.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.12 2024-09-14T14:21:11,052 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/6e/ae/5b3aa37475e1bab97b24d7a2ea1f6b4287b0aea67122224f855c12581ac5/mantis_xray-3.1.12-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,052 Found link https://files.pythonhosted.org/packages/95/17/a8333aad66b238c2d422d0ba506dba8bd8c671fc912121dd1e0bb0100afe/mantis-xray-3.1.13.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.13 2024-09-14T14:21:11,053 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/52/ad/e35c37bc952108423b9bfd5419c652061c5f0e1183e66ff28e4484e8978e/mantis_xray-3.1.13-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,054 Found link https://files.pythonhosted.org/packages/7b/4e/9bab039ac3675e31d6e929270f1179a0ca79812b7ceb4929f9770a4e5537/mantis-xray-3.1.14.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.14 2024-09-14T14:21:11,054 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/8f/e4/d6a2cd104241945a24e381080e389e535b69467594ca830928023547f5c8/mantis_xray-3.1.14-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,055 Found link https://files.pythonhosted.org/packages/80/dd/0f36d100b29c8b383510d7c6886d4134bb82344762ade06d91f6589b364c/mantis-xray-3.1.15.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.1.15 2024-09-14T14:21:11,056 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/a6/86/c54f252480a8cb9eaf8b3713da09e16327a5e4247a3d09293a6f4af1a2d2/mantis_xray-3.1.15-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,056 Skipping link: No binaries permitted for mantis-xray: https://files.pythonhosted.org/packages/e8/81/df5643d8ea3182ee4d1a1c122fd49c20bc9af349f7c871a067d46905721f/mantis_xray-3.2.1-py3-none-any.whl (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,057 Found link https://files.pythonhosted.org/packages/17/0b/16c3a40edc3e98282ef6e3ecd82f1a103229868d7f608a74d68f827e1419/mantis_xray-3.2.1.tar.gz (from https://pypi.org/simple/mantis-xray/) (requires-python:>=3), version: 3.2.1 2024-09-14T14:21:11,058 Fetching project page and analyzing links: https://www.piwheels.org/simple/mantis-xray/ 2024-09-14T14:21:11,059 Getting page https://www.piwheels.org/simple/mantis-xray/ 2024-09-14T14:21:11,060 Found index url https://www.piwheels.org/simple/ 2024-09-14T14:21:11,215 Fetched page https://www.piwheels.org/simple/mantis-xray/ as text/html 2024-09-14T14:21:11,219 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.15-py3-none-any.whl#sha256=fef377c4c20d8d758c22284040b10459f786f9e8e2cb687b3c2c0f7d1d4a23ed (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,220 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.14-py3-none-any.whl#sha256=4cbfd4a26ed44ef747f3c877095fecb720a4bb56af8b141c23d84f6f49c535c3 (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,220 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.13-py3-none-any.whl#sha256=1ebf9bc6739a53e40cbf4f9a2945d2ea1c6b4f088d9c1ea56244fbd7b86b811c (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,221 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.12-py3-none-any.whl#sha256=7698508a540ba62d9144adbb3385a72fe968752832a5b5eec4237fa54029625c (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,221 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.11-py3-none-any.whl#sha256=1acf110b9b8b63126cdd7013dbaa3458d413f05fc7d7cbb3777087f49844d97e (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,222 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.10-py3-none-any.whl#sha256=9e6ad4e7a43fb274483dec37e8a835b09d8c4e78f10bd4217dd0d2add285c49d (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,222 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.9-py3-none-any.whl#sha256=7df8f2298e5bbd72cff8f6ce3c96982c514724eb82bb3b5b4bc6a1f59b7e01bc (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,223 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.7-py3-none-any.whl#sha256=88b201ef21cf49fec4fea0aacfb4588920384214075901df4a3ca3d30e289acd (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,223 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.6-py3-none-any.whl#sha256=99fe76aad498c988d2c8a83e3cf283ab4ecc38fb5ffc833a8d940ad8f1dca32e (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,224 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.4-py3-none-any.whl#sha256=0df3af2ed091916fb3f47a28232e64ffcebd67b280c2d1bf9fef0c9a1487e9c6 (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,225 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.1.3-py3-none-any.whl#sha256=93310989f033f6b49d9aee26932fe08f19977666e2615ee4ec2e6995bbf6b56c (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,225 Skipping link: No binaries permitted for mantis-xray: https://www.piwheels.org/simple/mantis-xray/mantis_xray-3.0.11-py3-none-any.whl#sha256=3fca5a989a33032b935c3b515d91f6f5794403712502c25c92f9799459f7feea (from https://www.piwheels.org/simple/mantis-xray/) (requires-python:>=3) 2024-09-14T14:21:11,226 Skipping link: not a file: https://www.piwheels.org/simple/mantis-xray/ 2024-09-14T14:21:11,226 Skipping link: not a file: https://pypi.org/simple/mantis-xray/ 2024-09-14T14:21:11,247 Given no hashes to check 1 links for project 'mantis-xray': discarding no candidates 2024-09-14T14:21:11,249 Collecting mantis-xray==3.2.1 2024-09-14T14:21:11,251 Created temporary directory: /tmp/pip-unpack-4xef4ohi 2024-09-14T14:21:11,729 Downloading mantis_xray-3.2.1.tar.gz (1.6 MB) 2024-09-14T14:21:12,316 Added mantis-xray==3.2.1 from https://files.pythonhosted.org/packages/17/0b/16c3a40edc3e98282ef6e3ecd82f1a103229868d7f608a74d68f827e1419/mantis_xray-3.2.1.tar.gz to build tracker '/tmp/pip-build-tracker-729z9y8x' 2024-09-14T14:21:12,318 Running setup.py (path:/tmp/pip-wheel-yc2dja04/mantis-xray_98725ea783f24529be610e2b24ad4537/setup.py) egg_info for package mantis-xray 2024-09-14T14:21:12,319 Created temporary directory: /tmp/pip-pip-egg-info-9jxy5mbj 2024-09-14T14:21:12,319 Preparing metadata (setup.py): started 2024-09-14T14:21:12,321 Running command python setup.py egg_info 2024-09-14T14:21:13,398 running egg_info 2024-09-14T14:21:13,399 creating /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info 2024-09-14T14:21:13,425 writing /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/PKG-INFO 2024-09-14T14:21:13,429 writing dependency_links to /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/dependency_links.txt 2024-09-14T14:21:13,431 writing entry points to /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/entry_points.txt 2024-09-14T14:21:13,432 writing requirements to /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/requires.txt 2024-09-14T14:21:13,433 writing top-level names to /tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/top_level.txt 2024-09-14T14:21:13,435 writing manifest file '/tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/SOURCES.txt' 2024-09-14T14:21:13,524 reading manifest file '/tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/SOURCES.txt' 2024-09-14T14:21:13,526 reading manifest template 'MANIFEST.in' 2024-09-14T14:21:13,549 adding license file 'LICENSE' 2024-09-14T14:21:13,553 writing manifest file '/tmp/pip-pip-egg-info-9jxy5mbj/mantis_xray.egg-info/SOURCES.txt' 2024-09-14T14:21:13,666 Preparing metadata (setup.py): finished with status 'done' 2024-09-14T14:21:13,670 Source in /tmp/pip-wheel-yc2dja04/mantis-xray_98725ea783f24529be610e2b24ad4537 has version 3.2.1, which satisfies requirement mantis-xray==3.2.1 from https://files.pythonhosted.org/packages/17/0b/16c3a40edc3e98282ef6e3ecd82f1a103229868d7f608a74d68f827e1419/mantis_xray-3.2.1.tar.gz 2024-09-14T14:21:13,671 Removed mantis-xray==3.2.1 from https://files.pythonhosted.org/packages/17/0b/16c3a40edc3e98282ef6e3ecd82f1a103229868d7f608a74d68f827e1419/mantis_xray-3.2.1.tar.gz from build tracker '/tmp/pip-build-tracker-729z9y8x' 2024-09-14T14:21:13,678 Created temporary directory: /tmp/pip-unpack-w06y9sht 2024-09-14T14:21:13,679 Created temporary directory: /tmp/pip-unpack-5kqgimmg 2024-09-14T14:21:13,680 Building wheels for collected packages: mantis-xray 2024-09-14T14:21:13,684 Created temporary directory: /tmp/pip-wheel-k8fsvxu_ 2024-09-14T14:21:13,685 Building wheel for mantis-xray (setup.py): started 2024-09-14T14:21:13,686 Destination directory: /tmp/pip-wheel-k8fsvxu_ 2024-09-14T14:21:13,686 Running command python setup.py bdist_wheel 2024-09-14T14:21:14,742 running bdist_wheel 2024-09-14T14:21:14,882 running build 2024-09-14T14:21:14,883 running build_py 2024-09-14T14:21:14,915 creating build 2024-09-14T14:21:14,916 creating build/lib 2024-09-14T14:21:14,917 creating build/lib/mantis_xray 2024-09-14T14:21:14,918 copying mantis_xray/logos.py -> build/lib/mantis_xray 2024-09-14T14:21:14,928 copying mantis_xray/Mrc.py -> build/lib/mantis_xray 2024-09-14T14:21:14,933 copying mantis_xray/data_stack.py -> build/lib/mantis_xray 2024-09-14T14:21:14,935 copying mantis_xray/__init__.py -> build/lib/mantis_xray 2024-09-14T14:21:14,937 copying mantis_xray/__main__.py -> build/lib/mantis_xray 2024-09-14T14:21:14,939 copying mantis_xray/helpers.py -> build/lib/mantis_xray 2024-09-14T14:21:14,941 copying mantis_xray/mantis.py -> build/lib/mantis_xray 2024-09-14T14:21:14,944 copying mantis_xray/henke.py -> build/lib/mantis_xray 2024-09-14T14:21:14,946 copying mantis_xray/nnma.py -> build/lib/mantis_xray 2024-09-14T14:21:14,948 copying mantis_xray/mantis_qt.py -> build/lib/mantis_xray 2024-09-14T14:21:14,961 copying mantis_xray/data_struct.py -> build/lib/mantis_xray 2024-09-14T14:21:14,963 copying mantis_xray/tomo_reconstruction.py -> build/lib/mantis_xray 2024-09-14T14:21:14,965 copying mantis_xray/analyze.py -> build/lib/mantis_xray 2024-09-14T14:21:14,970 creating build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,971 copying mantis_xray/TomoCS/forward_backward_tv.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,973 copying mantis_xray/TomoCS/util.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,975 copying mantis_xray/TomoCS/_rank_order.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,976 copying mantis_xray/TomoCS/__init__.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,978 copying mantis_xray/TomoCS/sirt.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,981 copying mantis_xray/TomoCS/tv_denoising.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,983 copying mantis_xray/TomoCS/projections.py -> build/lib/mantis_xray/TomoCS 2024-09-14T14:21:14,986 creating build/lib/mantis_xray/file_plugins 2024-09-14T14:21:14,987 copying mantis_xray/file_plugins/file_sdf.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:14,989 copying mantis_xray/file_plugins/file_ncb.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:14,992 copying mantis_xray/file_plugins/__init__.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:14,994 copying mantis_xray/file_plugins/file_xrm.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:14,998 copying mantis_xray/file_plugins/file_dataexch_hdf5.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,001 copying mantis_xray/file_plugins/file_json.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,004 copying mantis_xray/file_plugins/file_csv.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,006 copying mantis_xray/file_plugins/file_nexus_hdf5.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,008 copying mantis_xray/file_plugins/file_sm_netcdf.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,010 copying mantis_xray/file_plugins/file_stk.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,012 copying mantis_xray/file_plugins/file_bim.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,014 copying mantis_xray/file_plugins/file_tif.py -> build/lib/mantis_xray/file_plugins 2024-09-14T14:21:15,016 running egg_info 2024-09-14T14:21:15,043 writing mantis_xray.egg-info/PKG-INFO 2024-09-14T14:21:15,046 writing dependency_links to mantis_xray.egg-info/dependency_links.txt 2024-09-14T14:21:15,048 writing entry points to mantis_xray.egg-info/entry_points.txt 2024-09-14T14:21:15,049 writing requirements to mantis_xray.egg-info/requires.txt 2024-09-14T14:21:15,050 writing top-level names to mantis_xray.egg-info/top_level.txt 2024-09-14T14:21:15,083 reading manifest file 'mantis_xray.egg-info/SOURCES.txt' 2024-09-14T14:21:15,087 reading manifest template 'MANIFEST.in' 2024-09-14T14:21:15,112 adding license file 'LICENSE' 2024-09-14T14:21:15,116 writing manifest file 'mantis_xray.egg-info/SOURCES.txt' 2024-09-14T14:21:15,119 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'mantis_xray.images' is absent from the `packages` configuration. 2024-09-14T14:21:15,119 !! 2024-09-14T14:21:15,120 ******************************************************************************** 2024-09-14T14:21:15,121 ############################ 2024-09-14T14:21:15,121 # Package would be ignored # 2024-09-14T14:21:15,122 ############################ 2024-09-14T14:21:15,123 Python recognizes 'mantis_xray.images' as an importable package[^1], 2024-09-14T14:21:15,123 but it is absent from setuptools' `packages` configuration. 2024-09-14T14:21:15,125 This leads to an ambiguous overall configuration. If you want to distribute this 2024-09-14T14:21:15,125 package, please make sure that 'mantis_xray.images' is explicitly added 2024-09-14T14:21:15,125 to the `packages` configuration field. 2024-09-14T14:21:15,126 Alternatively, you can also rely on setuptools' discovery methods 2024-09-14T14:21:15,126 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-09-14T14:21:15,127 instead of `find_packages(...)`/`find:`). 2024-09-14T14:21:15,128 You can read more about "package discovery" on setuptools documentation page: 2024-09-14T14:21:15,129 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-09-14T14:21:15,130 If you don't want 'mantis_xray.images' to be distributed and are 2024-09-14T14:21:15,130 already explicitly excluding 'mantis_xray.images' via 2024-09-14T14:21:15,130 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-09-14T14:21:15,131 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-09-14T14:21:15,131 combination with a more fine grained `package-data` configuration. 2024-09-14T14:21:15,132 You can read more about "package data files" on setuptools documentation page: 2024-09-14T14:21:15,137 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-09-14T14:21:15,138 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-09-14T14:21:15,139 even if it does not contain any `.py` files. 2024-09-14T14:21:15,139 On the other hand, currently there is no concept of package data 2024-09-14T14:21:15,140 directory, all directories are treated like packages. 2024-09-14T14:21:15,140 ******************************************************************************** 2024-09-14T14:21:15,142 !! 2024-09-14T14:21:15,142 check.warn(importable) 2024-09-14T14:21:15,143 copying mantis_xray/Mantis_batch_settings.txt -> build/lib/mantis_xray 2024-09-14T14:21:15,143 copying mantis_xray/dialogalign.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,144 copying mantis_xray/dialogsave.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,145 copying mantis_xray/henke.xdr -> build/lib/mantis_xray 2024-09-14T14:21:15,145 copying mantis_xray/pageloaddata.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,146 copying mantis_xray/pagemap.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,147 copying mantis_xray/pagestack.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,150 copying mantis_xray/showalign2.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,153 copying mantis_xray/showartefacts.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,156 copying mantis_xray/showmulticrop.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,159 copying mantis_xray/showodmap.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,162 copying mantis_xray/showspectralroi.ui -> build/lib/mantis_xray 2024-09-14T14:21:15,164 copying mantis_xray/stylesheet_global.qss -> build/lib/mantis_xray 2024-09-14T14:21:15,166 creating build/lib/mantis_xray/images 2024-09-14T14:21:15,167 copying mantis_xray/images/Mantis_logo.icns -> build/lib/mantis_xray/images 2024-09-14T14:21:15,172 copying mantis_xray/images/Mantis_logo.ico -> build/lib/mantis_xray/images 2024-09-14T14:21:15,177 copying mantis_xray/images/Mantis_logo_about.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,182 copying mantis_xray/images/document-open.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,186 copying mantis_xray/images/help-browser.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,192 copying mantis_xray/images/logo-2l-32.ico -> build/lib/mantis_xray/images 2024-09-14T14:21:15,194 copying mantis_xray/images/media-floppy.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,197 copying mantis_xray/images/mirror.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,199 copying mantis_xray/images/open-sl.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,201 copying mantis_xray/images/rotate.png -> build/lib/mantis_xray/images 2024-09-14T14:21:15,232 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-09-14T14:21:15,233 !! 2024-09-14T14:21:15,234 ******************************************************************************** 2024-09-14T14:21:15,234 Please avoid running ``setup.py`` directly. 2024-09-14T14:21:15,234 Instead, use pypa/build, pypa/installer or other 2024-09-14T14:21:15,235 standards-based tools. 2024-09-14T14:21:15,236 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-09-14T14:21:15,236 ******************************************************************************** 2024-09-14T14:21:15,237 !! 2024-09-14T14:21:15,238 self.initialize_options() 2024-09-14T14:21:15,259 installing to build/bdist.linux-armv7l/wheel 2024-09-14T14:21:15,259 running install 2024-09-14T14:21:15,284 running install_lib 2024-09-14T14:21:15,310 creating build/bdist.linux-armv7l 2024-09-14T14:21:15,311 creating build/bdist.linux-armv7l/wheel 2024-09-14T14:21:15,313 creating build/bdist.linux-armv7l/wheel/mantis_xray 2024-09-14T14:21:15,314 copying build/lib/mantis_xray/logos.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,322 copying build/lib/mantis_xray/showartefacts.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,325 copying build/lib/mantis_xray/pageloaddata.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,328 copying build/lib/mantis_xray/stylesheet_global.qss -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,329 copying build/lib/mantis_xray/Mrc.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,334 copying build/lib/mantis_xray/data_stack.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,337 copying build/lib/mantis_xray/__init__.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,338 copying build/lib/mantis_xray/__main__.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,340 copying build/lib/mantis_xray/showalign2.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,343 copying build/lib/mantis_xray/helpers.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,345 copying build/lib/mantis_xray/pagemap.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,348 copying build/lib/mantis_xray/showspectralroi.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,350 copying build/lib/mantis_xray/Mantis_batch_settings.txt -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,352 copying build/lib/mantis_xray/henke.xdr -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,361 copying build/lib/mantis_xray/mantis.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,364 creating build/bdist.linux-armv7l/wheel/mantis_xray/images 2024-09-14T14:21:15,365 copying build/lib/mantis_xray/images/Mantis_logo_about.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,370 copying build/lib/mantis_xray/images/mirror.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,372 copying build/lib/mantis_xray/images/document-open.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,375 copying build/lib/mantis_xray/images/Mantis_logo.ico -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,380 copying build/lib/mantis_xray/images/logo-2l-32.ico -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,382 copying build/lib/mantis_xray/images/media-floppy.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,385 copying build/lib/mantis_xray/images/rotate.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,387 copying build/lib/mantis_xray/images/open-sl.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,388 copying build/lib/mantis_xray/images/Mantis_logo.icns -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,392 copying build/lib/mantis_xray/images/help-browser.png -> build/bdist.linux-armv7l/wheel/./mantis_xray/images 2024-09-14T14:21:15,397 copying build/lib/mantis_xray/showmulticrop.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,399 copying build/lib/mantis_xray/pagestack.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,402 copying build/lib/mantis_xray/showodmap.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,405 copying build/lib/mantis_xray/henke.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,407 creating build/bdist.linux-armv7l/wheel/mantis_xray/TomoCS 2024-09-14T14:21:15,408 copying build/lib/mantis_xray/TomoCS/forward_backward_tv.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,411 copying build/lib/mantis_xray/TomoCS/util.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,413 copying build/lib/mantis_xray/TomoCS/_rank_order.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,414 copying build/lib/mantis_xray/TomoCS/__init__.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,416 copying build/lib/mantis_xray/TomoCS/sirt.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,418 copying build/lib/mantis_xray/TomoCS/tv_denoising.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,421 copying build/lib/mantis_xray/TomoCS/projections.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/TomoCS 2024-09-14T14:21:15,423 copying build/lib/mantis_xray/dialogalign.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,425 copying build/lib/mantis_xray/nnma.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,427 copying build/lib/mantis_xray/mantis_qt.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,439 copying build/lib/mantis_xray/data_struct.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,441 copying build/lib/mantis_xray/tomo_reconstruction.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,444 copying build/lib/mantis_xray/analyze.py -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,448 creating build/bdist.linux-armv7l/wheel/mantis_xray/file_plugins 2024-09-14T14:21:15,449 copying build/lib/mantis_xray/file_plugins/file_sdf.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,452 copying build/lib/mantis_xray/file_plugins/file_ncb.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,454 copying build/lib/mantis_xray/file_plugins/__init__.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,457 copying build/lib/mantis_xray/file_plugins/file_xrm.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,461 copying build/lib/mantis_xray/file_plugins/file_dataexch_hdf5.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,465 copying build/lib/mantis_xray/file_plugins/file_json.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,467 copying build/lib/mantis_xray/file_plugins/file_csv.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,469 copying build/lib/mantis_xray/file_plugins/file_nexus_hdf5.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,472 copying build/lib/mantis_xray/file_plugins/file_sm_netcdf.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,474 copying build/lib/mantis_xray/file_plugins/file_stk.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,476 copying build/lib/mantis_xray/file_plugins/file_bim.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,478 copying build/lib/mantis_xray/file_plugins/file_tif.py -> build/bdist.linux-armv7l/wheel/./mantis_xray/file_plugins 2024-09-14T14:21:15,481 copying build/lib/mantis_xray/dialogsave.ui -> build/bdist.linux-armv7l/wheel/./mantis_xray 2024-09-14T14:21:15,483 running install_egg_info 2024-09-14T14:21:15,514 Copying mantis_xray.egg-info to build/bdist.linux-armv7l/wheel/./mantis_xray-3.2.1-py3.11.egg-info 2024-09-14T14:21:15,525 running install_scripts 2024-09-14T14:21:15,542 creating build/bdist.linux-armv7l/wheel/mantis_xray-3.2.1.dist-info/WHEEL 2024-09-14T14:21:15,545 creating '/tmp/pip-wheel-k8fsvxu_/mantis_xray-3.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-09-14T14:21:15,547 adding 'mantis_xray/Mantis_batch_settings.txt' 2024-09-14T14:21:15,566 adding 'mantis_xray/Mrc.py' 2024-09-14T14:21:15,569 adding 'mantis_xray/__init__.py' 2024-09-14T14:21:15,570 adding 'mantis_xray/__main__.py' 2024-09-14T14:21:15,579 adding 'mantis_xray/analyze.py' 2024-09-14T14:21:15,583 adding 'mantis_xray/data_stack.py' 2024-09-14T14:21:15,585 adding 'mantis_xray/data_struct.py' 2024-09-14T14:21:15,586 adding 'mantis_xray/dialogalign.ui' 2024-09-14T14:21:15,587 adding 'mantis_xray/dialogsave.ui' 2024-09-14T14:21:15,589 adding 'mantis_xray/helpers.py' 2024-09-14T14:21:15,592 adding 'mantis_xray/henke.py' 2024-09-14T14:21:15,649 adding 'mantis_xray/henke.xdr' 2024-09-14T14:21:15,718 adding 'mantis_xray/logos.py' 2024-09-14T14:21:15,724 adding 'mantis_xray/mantis.py' 2024-09-14T14:21:15,780 adding 'mantis_xray/mantis_qt.py' 2024-09-14T14:21:15,785 adding 'mantis_xray/nnma.py' 2024-09-14T14:21:15,788 adding 'mantis_xray/pageloaddata.ui' 2024-09-14T14:21:15,791 adding 'mantis_xray/pagemap.ui' 2024-09-14T14:21:15,794 adding 'mantis_xray/pagestack.ui' 2024-09-14T14:21:15,797 adding 'mantis_xray/showalign2.ui' 2024-09-14T14:21:15,799 adding 'mantis_xray/showartefacts.ui' 2024-09-14T14:21:15,801 adding 'mantis_xray/showmulticrop.ui' 2024-09-14T14:21:15,803 adding 'mantis_xray/showodmap.ui' 2024-09-14T14:21:15,805 adding 'mantis_xray/showspectralroi.ui' 2024-09-14T14:21:15,806 adding 'mantis_xray/stylesheet_global.qss' 2024-09-14T14:21:15,808 adding 'mantis_xray/tomo_reconstruction.py' 2024-09-14T14:21:15,810 adding 'mantis_xray/TomoCS/__init__.py' 2024-09-14T14:21:15,811 adding 'mantis_xray/TomoCS/_rank_order.py' 2024-09-14T14:21:15,813 adding 'mantis_xray/TomoCS/forward_backward_tv.py' 2024-09-14T14:21:15,815 adding 'mantis_xray/TomoCS/projections.py' 2024-09-14T14:21:15,818 adding 'mantis_xray/TomoCS/sirt.py' 2024-09-14T14:21:15,819 adding 'mantis_xray/TomoCS/tv_denoising.py' 2024-09-14T14:21:15,821 adding 'mantis_xray/TomoCS/util.py' 2024-09-14T14:21:15,823 adding 'mantis_xray/file_plugins/__init__.py' 2024-09-14T14:21:15,825 adding 'mantis_xray/file_plugins/file_bim.py' 2024-09-14T14:21:15,826 adding 'mantis_xray/file_plugins/file_csv.py' 2024-09-14T14:21:15,833 adding 'mantis_xray/file_plugins/file_dataexch_hdf5.py' 2024-09-14T14:21:15,835 adding 'mantis_xray/file_plugins/file_json.py' 2024-09-14T14:21:15,838 adding 'mantis_xray/file_plugins/file_ncb.py' 2024-09-14T14:21:15,839 adding 'mantis_xray/file_plugins/file_nexus_hdf5.py' 2024-09-14T14:21:15,842 adding 'mantis_xray/file_plugins/file_sdf.py' 2024-09-14T14:21:15,843 adding 'mantis_xray/file_plugins/file_sm_netcdf.py' 2024-09-14T14:21:15,845 adding 'mantis_xray/file_plugins/file_stk.py' 2024-09-14T14:21:15,847 adding 'mantis_xray/file_plugins/file_tif.py' 2024-09-14T14:21:15,863 adding 'mantis_xray/file_plugins/file_xrm.py' 2024-09-14T14:21:15,876 adding 'mantis_xray/images/Mantis_logo.icns' 2024-09-14T14:21:15,899 adding 'mantis_xray/images/Mantis_logo.ico' 2024-09-14T14:21:15,913 adding 'mantis_xray/images/Mantis_logo_about.png' 2024-09-14T14:21:15,920 adding 'mantis_xray/images/document-open.png' 2024-09-14T14:21:15,934 adding 'mantis_xray/images/help-browser.png' 2024-09-14T14:21:15,936 adding 'mantis_xray/images/logo-2l-32.ico' 2024-09-14T14:21:15,940 adding 'mantis_xray/images/media-floppy.png' 2024-09-14T14:21:15,942 adding 'mantis_xray/images/mirror.png' 2024-09-14T14:21:15,943 adding 'mantis_xray/images/open-sl.png' 2024-09-14T14:21:15,944 adding 'mantis_xray/images/rotate.png' 2024-09-14T14:21:15,950 adding 'mantis_xray-3.2.1.dist-info/LICENSE' 2024-09-14T14:21:15,951 adding 'mantis_xray-3.2.1.dist-info/METADATA' 2024-09-14T14:21:15,952 adding 'mantis_xray-3.2.1.dist-info/WHEEL' 2024-09-14T14:21:15,953 adding 'mantis_xray-3.2.1.dist-info/entry_points.txt' 2024-09-14T14:21:15,954 adding 'mantis_xray-3.2.1.dist-info/top_level.txt' 2024-09-14T14:21:15,955 adding 'mantis_xray-3.2.1.dist-info/RECORD' 2024-09-14T14:21:15,973 removing build/bdist.linux-armv7l/wheel 2024-09-14T14:21:16,105 Building wheel for mantis-xray (setup.py): finished with status 'done' 2024-09-14T14:21:16,123 Created wheel for mantis-xray: filename=mantis_xray-3.2.1-py3-none-any.whl size=1581193 sha256=f5e4d1011bd07e00f355a826fd5983e73dd607e4ca56ab93d3964eb241417848 2024-09-14T14:21:16,124 Stored in directory: /tmp/pip-ephem-wheel-cache-_pttkg2v/wheels/65/5d/64/06b0a0dc7080b7395bfa5cb8a98800d0ac732fd566a6028a46 2024-09-14T14:21:16,137 Successfully built mantis-xray 2024-09-14T14:21:16,176 Removed build tracker: '/tmp/pip-build-tracker-729z9y8x'