2024-09-23T12:07:43,721 Created temporary directory: /tmp/pip-build-tracker-8upefa0b 2024-09-23T12:07:43,722 Initialized build tracking at /tmp/pip-build-tracker-8upefa0b 2024-09-23T12:07:43,722 Created build tracker: /tmp/pip-build-tracker-8upefa0b 2024-09-23T12:07:43,722 Entered build tracker: /tmp/pip-build-tracker-8upefa0b 2024-09-23T12:07:43,723 Created temporary directory: /tmp/pip-wheel-2nkp2afs 2024-09-23T12:07:43,727 Created temporary directory: /tmp/pip-ephem-wheel-cache-lwdaei0m 2024-09-23T12:07:43,771 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-09-23T12:07:43,774 2 location(s) to search for versions of macrel: 2024-09-23T12:07:43,774 * https://pypi.org/simple/macrel/ 2024-09-23T12:07:43,774 * https://www.piwheels.org/simple/macrel/ 2024-09-23T12:07:43,775 Fetching project page and analyzing links: https://pypi.org/simple/macrel/ 2024-09-23T12:07:43,776 Getting page https://pypi.org/simple/macrel/ 2024-09-23T12:07:43,777 Found index url https://pypi.org/simple/ 2024-09-23T12:07:43,990 Fetched page https://pypi.org/simple/macrel/ as application/vnd.pypi.simple.v1+json 2024-09-23T12:07:43,993 Found link https://files.pythonhosted.org/packages/f1/f8/6b78e3f3c63fef49c5c3e4c0d2f2304e7ad7ceef11aa92888a96a9a9d9f7/macrel-0.4.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.4.0 2024-09-23T12:07:43,994 Found link https://files.pythonhosted.org/packages/73/8a/7e35ed92e3930c06fcf84c4237a58035ce40825e9a007befb973a3363818/macrel-0.6.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.0 2024-09-23T12:07:43,994 Found link https://files.pythonhosted.org/packages/1f/e6/84c10c618a31649b316ebf66d061284dfad74a2e6f5490f6b4b73eecc116/macrel-0.6.1.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.1 2024-09-23T12:07:43,995 Found link https://files.pythonhosted.org/packages/47/87/37920928f4052b8bd2fe92f4d584c4543a9cd844c36408f865b6d67f96d1/macrel-1.1.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.1.0 2024-09-23T12:07:43,996 Found link https://files.pythonhosted.org/packages/dd/40/319ac423a1c8c22fcd9512d8d8726c037edf50b0e5859e04e1ae66b145d6/macrel-1.2.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.2.0 2024-09-23T12:07:43,996 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/42/a7/d72533a839ef768152648c6cff1ad02cb8e0aa2baa682875543822838f34/macrel-1.3.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2024-09-23T12:07:43,997 Found link https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.3.0 2024-09-23T12:07:43,998 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/04/7f/deccb15d02e5f64221dece01ddcb857dce94c55d21c3dd473a752f8c1c48/macrel-1.4.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2024-09-23T12:07:43,998 Found link https://files.pythonhosted.org/packages/68/12/a03aea619552da8ed087eebd78ccd80bd25039a78c04a9ebc37f87a18f3a/macrel-1.4.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.4.0 2024-09-23T12:07:43,999 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/ca/b2/25d9f03f8d20764d45217240559554b3d3500e6617a21722d86c86addce6/macrel-1.5.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2024-09-23T12:07:44,000 Found link https://files.pythonhosted.org/packages/cd/bf/297021fbecc1af181b0f5a1e02627ee8a9ed039725e381f322dd8dfb190f/macrel-1.5.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.5.0 2024-09-23T12:07:44,001 Fetching project page and analyzing links: https://www.piwheels.org/simple/macrel/ 2024-09-23T12:07:44,002 Getting page https://www.piwheels.org/simple/macrel/ 2024-09-23T12:07:44,003 Found index url https://www.piwheels.org/simple/ 2024-09-23T12:07:44,167 Fetched page https://www.piwheels.org/simple/macrel/ as text/html 2024-09-23T12:07:44,171 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.4.0-py3-none-any.whl#sha256=2f1342ee07fdbadd57ed2dd272da8509fe388447628dbbcc4654345f5f6c8547 (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,171 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.3.0-py3-none-any.whl#sha256=3da259eb438294850c2ff458e238de2149e4cd5afb84c93820237b440c6b42d1 (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,173 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.2.0-py3-none-any.whl#sha256=48576d924f0180b1aee773e684176977dbcb27b61842fd1b008eb078ae300c6e (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,173 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.1.0-py3-none-any.whl#sha256=5c1275c71873a16760d47f10592fead14821308943c6e2581e2f57f3431a9cf8 (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,173 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.1-py3-none-any.whl#sha256=def298757487ee73cfb70f4d411ad41e4e1ecbe5abecb1b5fca9019cc04440fe (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,174 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.0-py3-none-any.whl#sha256=7ece8510e875f47b331d420a802d239846a2f7703367e550fa0294ddab6fabb8 (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,174 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.4.0-py3-none-any.whl#sha256=3dcc85ce084d596da3b8264c7c44330a4e11a51dc763cbd0c6b9362dcde9f1b6 (from https://www.piwheels.org/simple/macrel/) 2024-09-23T12:07:44,175 Skipping link: not a file: https://www.piwheels.org/simple/macrel/ 2024-09-23T12:07:44,175 Skipping link: not a file: https://pypi.org/simple/macrel/ 2024-09-23T12:07:44,195 Given no hashes to check 1 links for project 'macrel': discarding no candidates 2024-09-23T12:07:44,197 Collecting macrel==1.5.0 2024-09-23T12:07:44,199 Created temporary directory: /tmp/pip-unpack-e9ajjf81 2024-09-23T12:07:44,415 Downloading macrel-1.5.0.tar.gz (4.7 MB) 2024-09-23T12:07:45,406 Added macrel==1.5.0 from https://files.pythonhosted.org/packages/cd/bf/297021fbecc1af181b0f5a1e02627ee8a9ed039725e381f322dd8dfb190f/macrel-1.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-8upefa0b' 2024-09-23T12:07:45,408 Running setup.py (path:/tmp/pip-wheel-2nkp2afs/macrel_85b46659d14943e981d5fc72efbf9541/setup.py) egg_info for package macrel 2024-09-23T12:07:45,409 Created temporary directory: /tmp/pip-pip-egg-info-lmyp5_9h 2024-09-23T12:07:45,410 Preparing metadata (setup.py): started 2024-09-23T12:07:45,411 Running command python setup.py egg_info 2024-09-23T12:07:46,498 running egg_info 2024-09-23T12:07:46,500 creating /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info 2024-09-23T12:07:46,528 writing /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/PKG-INFO 2024-09-23T12:07:46,532 writing dependency_links to /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/dependency_links.txt 2024-09-23T12:07:46,533 writing entry points to /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/entry_points.txt 2024-09-23T12:07:46,535 writing requirements to /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/requires.txt 2024-09-23T12:07:46,536 writing top-level names to /tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/top_level.txt 2024-09-23T12:07:46,537 writing manifest file '/tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/SOURCES.txt' 2024-09-23T12:07:46,630 reading manifest file '/tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/SOURCES.txt' 2024-09-23T12:07:46,632 reading manifest template 'MANIFEST.in' 2024-09-23T12:07:46,634 warning: no files found matching 'macrel/data/*' 2024-09-23T12:07:46,634 adding license file 'LICENSE' 2024-09-23T12:07:46,637 writing manifest file '/tmp/pip-pip-egg-info-lmyp5_9h/macrel.egg-info/SOURCES.txt' 2024-09-23T12:07:46,750 Preparing metadata (setup.py): finished with status 'done' 2024-09-23T12:07:46,757 Source in /tmp/pip-wheel-2nkp2afs/macrel_85b46659d14943e981d5fc72efbf9541 has version 1.5.0, which satisfies requirement macrel==1.5.0 from https://files.pythonhosted.org/packages/cd/bf/297021fbecc1af181b0f5a1e02627ee8a9ed039725e381f322dd8dfb190f/macrel-1.5.0.tar.gz 2024-09-23T12:07:46,758 Removed macrel==1.5.0 from https://files.pythonhosted.org/packages/cd/bf/297021fbecc1af181b0f5a1e02627ee8a9ed039725e381f322dd8dfb190f/macrel-1.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-8upefa0b' 2024-09-23T12:07:46,765 Created temporary directory: /tmp/pip-unpack-5s6dmtse 2024-09-23T12:07:46,766 Created temporary directory: /tmp/pip-unpack-cv2j0kq9 2024-09-23T12:07:46,766 Building wheels for collected packages: macrel 2024-09-23T12:07:46,770 Created temporary directory: /tmp/pip-wheel-ejdd6h0c 2024-09-23T12:07:46,771 Building wheel for macrel (setup.py): started 2024-09-23T12:07:46,772 Destination directory: /tmp/pip-wheel-ejdd6h0c 2024-09-23T12:07:46,772 Running command python setup.py bdist_wheel 2024-09-23T12:07:47,847 running bdist_wheel 2024-09-23T12:07:47,991 running build 2024-09-23T12:07:47,992 running build_py 2024-09-23T12:07:48,024 creating build 2024-09-23T12:07:48,025 creating build/lib 2024-09-23T12:07:48,026 creating build/lib/macrel 2024-09-23T12:07:48,027 copying macrel/ampsphere.py -> build/lib/macrel 2024-09-23T12:07:48,030 copying macrel/__init__.py -> build/lib/macrel 2024-09-23T12:07:48,031 copying macrel/ORFs_prediction.py -> build/lib/macrel 2024-09-23T12:07:48,033 copying macrel/AMP_features.py -> build/lib/macrel 2024-09-23T12:07:48,034 copying macrel/macrel_version.py -> build/lib/macrel 2024-09-23T12:07:48,036 copying macrel/AMP_predict.py -> build/lib/macrel 2024-09-23T12:07:48,038 copying macrel/output.py -> build/lib/macrel 2024-09-23T12:07:48,040 copying macrel/fasta.py -> build/lib/macrel 2024-09-23T12:07:48,042 copying macrel/macrel_features.py -> build/lib/macrel 2024-09-23T12:07:48,044 copying macrel/main.py -> build/lib/macrel 2024-09-23T12:07:48,047 copying macrel/filter_smorfs.py -> build/lib/macrel 2024-09-23T12:07:48,048 copying macrel/utils.py -> build/lib/macrel 2024-09-23T12:07:48,050 copying macrel/database.py -> build/lib/macrel 2024-09-23T12:07:48,053 creating build/lib/macrel/tests 2024-09-23T12:07:48,054 copying macrel/tests/test_predict.py -> build/lib/macrel/tests 2024-09-23T12:07:48,055 copying macrel/tests/test_features.py -> build/lib/macrel/tests 2024-09-23T12:07:48,057 copying macrel/tests/__init__.py -> build/lib/macrel/tests 2024-09-23T12:07:48,059 copying macrel/tests/test_ampsphere.py -> build/lib/macrel/tests 2024-09-23T12:07:48,064 creating build/lib/macrel/data 2024-09-23T12:07:48,065 creating build/lib/macrel/data/scripts 2024-09-23T12:07:48,066 copying macrel/data/scripts/trim.pe.ngl -> build/lib/macrel/data/scripts 2024-09-23T12:07:48,068 copying macrel/data/scripts/count.ngl -> build/lib/macrel/data/scripts 2024-09-23T12:07:48,070 copying macrel/data/scripts/trim.se.ngl -> build/lib/macrel/data/scripts 2024-09-23T12:07:48,072 creating build/lib/macrel/data/models 2024-09-23T12:07:48,073 copying macrel/data/models/AMP.pkl.gz -> build/lib/macrel/data/models 2024-09-23T12:07:48,139 copying macrel/data/models/Hemo.pkl.gz -> build/lib/macrel/data/models 2024-09-23T12:07:48,173 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-09-23T12:07:48,174 !! 2024-09-23T12:07:48,175 ******************************************************************************** 2024-09-23T12:07:48,175 Please avoid running ``setup.py`` directly. 2024-09-23T12:07:48,176 Instead, use pypa/build, pypa/installer or other 2024-09-23T12:07:48,177 standards-based tools. 2024-09-23T12:07:48,178 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-09-23T12:07:48,178 ******************************************************************************** 2024-09-23T12:07:48,180 !! 2024-09-23T12:07:48,181 self.initialize_options() 2024-09-23T12:07:48,206 installing to build/bdist.linux-armv7l/wheel 2024-09-23T12:07:48,206 running install 2024-09-23T12:07:48,231 running install_lib 2024-09-23T12:07:48,259 creating build/bdist.linux-armv7l 2024-09-23T12:07:48,260 creating build/bdist.linux-armv7l/wheel 2024-09-23T12:07:48,262 creating build/bdist.linux-armv7l/wheel/macrel 2024-09-23T12:07:48,263 copying build/lib/macrel/ampsphere.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,266 copying build/lib/macrel/__init__.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,268 copying build/lib/macrel/ORFs_prediction.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,270 copying build/lib/macrel/AMP_features.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,273 creating build/bdist.linux-armv7l/wheel/macrel/data 2024-09-23T12:07:48,275 creating build/bdist.linux-armv7l/wheel/macrel/data/scripts 2024-09-23T12:07:48,276 copying build/lib/macrel/data/scripts/trim.pe.ngl -> build/bdist.linux-armv7l/wheel/./macrel/data/scripts 2024-09-23T12:07:48,278 copying build/lib/macrel/data/scripts/count.ngl -> build/bdist.linux-armv7l/wheel/./macrel/data/scripts 2024-09-23T12:07:48,280 copying build/lib/macrel/data/scripts/trim.se.ngl -> build/bdist.linux-armv7l/wheel/./macrel/data/scripts 2024-09-23T12:07:48,282 creating build/bdist.linux-armv7l/wheel/macrel/data/models 2024-09-23T12:07:48,284 copying build/lib/macrel/data/models/AMP.pkl.gz -> build/bdist.linux-armv7l/wheel/./macrel/data/models 2024-09-23T12:07:48,353 copying build/lib/macrel/data/models/Hemo.pkl.gz -> build/bdist.linux-armv7l/wheel/./macrel/data/models 2024-09-23T12:07:48,358 copying build/lib/macrel/macrel_version.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,360 copying build/lib/macrel/AMP_predict.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,362 copying build/lib/macrel/output.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,364 copying build/lib/macrel/fasta.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,366 creating build/bdist.linux-armv7l/wheel/macrel/tests 2024-09-23T12:07:48,367 copying build/lib/macrel/tests/test_predict.py -> build/bdist.linux-armv7l/wheel/./macrel/tests 2024-09-23T12:07:48,369 copying build/lib/macrel/tests/test_features.py -> build/bdist.linux-armv7l/wheel/./macrel/tests 2024-09-23T12:07:48,371 copying build/lib/macrel/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./macrel/tests 2024-09-23T12:07:48,373 copying build/lib/macrel/tests/test_ampsphere.py -> build/bdist.linux-armv7l/wheel/./macrel/tests 2024-09-23T12:07:48,375 copying build/lib/macrel/macrel_features.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,377 copying build/lib/macrel/main.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,379 copying build/lib/macrel/filter_smorfs.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,381 copying build/lib/macrel/utils.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,383 copying build/lib/macrel/database.py -> build/bdist.linux-armv7l/wheel/./macrel 2024-09-23T12:07:48,385 running install_egg_info 2024-09-23T12:07:48,419 running egg_info 2024-09-23T12:07:48,446 writing macrel.egg-info/PKG-INFO 2024-09-23T12:07:48,449 writing dependency_links to macrel.egg-info/dependency_links.txt 2024-09-23T12:07:48,451 writing entry points to macrel.egg-info/entry_points.txt 2024-09-23T12:07:48,452 writing requirements to macrel.egg-info/requires.txt 2024-09-23T12:07:48,453 writing top-level names to macrel.egg-info/top_level.txt 2024-09-23T12:07:48,486 reading manifest file 'macrel.egg-info/SOURCES.txt' 2024-09-23T12:07:48,490 reading manifest template 'MANIFEST.in' 2024-09-23T12:07:48,492 warning: no files found matching 'macrel/data/*' 2024-09-23T12:07:48,492 adding license file 'LICENSE' 2024-09-23T12:07:48,495 writing manifest file 'macrel.egg-info/SOURCES.txt' 2024-09-23T12:07:48,497 Copying macrel.egg-info to build/bdist.linux-armv7l/wheel/./macrel-1.5.0-py3.11.egg-info 2024-09-23T12:07:48,511 running install_scripts 2024-09-23T12:07:48,528 creating build/bdist.linux-armv7l/wheel/macrel-1.5.0.dist-info/WHEEL 2024-09-23T12:07:48,531 creating '/tmp/pip-wheel-ejdd6h0c/macrel-1.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-09-23T12:07:48,534 adding 'macrel/AMP_features.py' 2024-09-23T12:07:48,535 adding 'macrel/AMP_predict.py' 2024-09-23T12:07:48,536 adding 'macrel/ORFs_prediction.py' 2024-09-23T12:07:48,538 adding 'macrel/__init__.py' 2024-09-23T12:07:48,540 adding 'macrel/ampsphere.py' 2024-09-23T12:07:48,542 adding 'macrel/database.py' 2024-09-23T12:07:48,543 adding 'macrel/fasta.py' 2024-09-23T12:07:48,544 adding 'macrel/filter_smorfs.py' 2024-09-23T12:07:48,546 adding 'macrel/macrel_features.py' 2024-09-23T12:07:48,547 adding 'macrel/macrel_version.py' 2024-09-23T12:07:48,549 adding 'macrel/main.py' 2024-09-23T12:07:48,551 adding 'macrel/output.py' 2024-09-23T12:07:48,552 adding 'macrel/utils.py' 2024-09-23T12:07:49,138 adding 'macrel/data/models/AMP.pkl.gz' 2024-09-23T12:07:49,185 adding 'macrel/data/models/Hemo.pkl.gz' 2024-09-23T12:07:49,187 adding 'macrel/data/scripts/count.ngl' 2024-09-23T12:07:49,188 adding 'macrel/data/scripts/trim.pe.ngl' 2024-09-23T12:07:49,189 adding 'macrel/data/scripts/trim.se.ngl' 2024-09-23T12:07:49,191 adding 'macrel/tests/__init__.py' 2024-09-23T12:07:49,192 adding 'macrel/tests/test_ampsphere.py' 2024-09-23T12:07:49,194 adding 'macrel/tests/test_features.py' 2024-09-23T12:07:49,195 adding 'macrel/tests/test_predict.py' 2024-09-23T12:07:49,197 adding 'macrel-1.5.0.dist-info/LICENSE' 2024-09-23T12:07:49,198 adding 'macrel-1.5.0.dist-info/METADATA' 2024-09-23T12:07:49,199 adding 'macrel-1.5.0.dist-info/WHEEL' 2024-09-23T12:07:49,200 adding 'macrel-1.5.0.dist-info/entry_points.txt' 2024-09-23T12:07:49,201 adding 'macrel-1.5.0.dist-info/top_level.txt' 2024-09-23T12:07:49,202 adding 'macrel-1.5.0.dist-info/RECORD' 2024-09-23T12:07:49,256 removing build/bdist.linux-armv7l/wheel 2024-09-23T12:07:49,381 Building wheel for macrel (setup.py): finished with status 'done' 2024-09-23T12:07:49,430 Created wheel for macrel: filename=macrel-1.5.0-py3-none-any.whl size=4674974 sha256=50073e0809addd798eeb18c96a237fa039edd33144069935bcaeaba2397b02ac 2024-09-23T12:07:49,431 Stored in directory: /tmp/pip-ephem-wheel-cache-lwdaei0m/wheels/be/36/44/feb8d2365d9f20ac0b1dbca2d44d178f521d159d0f5dc33457 2024-09-23T12:07:49,445 Successfully built macrel 2024-09-23T12:07:49,562 Removed build tracker: '/tmp/pip-build-tracker-8upefa0b'