2024-09-27T21:28:18,413 Created temporary directory: /tmp/pip-build-tracker-hegvhqtv 2024-09-27T21:28:18,414 Initialized build tracking at /tmp/pip-build-tracker-hegvhqtv 2024-09-27T21:28:18,415 Created build tracker: /tmp/pip-build-tracker-hegvhqtv 2024-09-27T21:28:18,415 Entered build tracker: /tmp/pip-build-tracker-hegvhqtv 2024-09-27T21:28:18,416 Created temporary directory: /tmp/pip-wheel-4u1ivanq 2024-09-27T21:28:18,420 Created temporary directory: /tmp/pip-ephem-wheel-cache-yhna69s4 2024-09-27T21:28:18,463 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-09-27T21:28:18,466 2 location(s) to search for versions of modelcif: 2024-09-27T21:28:18,466 * https://pypi.org/simple/modelcif/ 2024-09-27T21:28:18,466 * https://www.piwheels.org/simple/modelcif/ 2024-09-27T21:28:18,467 Fetching project page and analyzing links: https://pypi.org/simple/modelcif/ 2024-09-27T21:28:18,468 Getting page https://pypi.org/simple/modelcif/ 2024-09-27T21:28:18,470 Found index url https://pypi.org/simple/ 2024-09-27T21:28:18,616 Fetched page https://pypi.org/simple/modelcif/ as application/vnd.pypi.simple.v1+json 2024-09-27T21:28:18,619 Found link https://files.pythonhosted.org/packages/86/a5/ca2f0f3d28f3b45e87d8e9865ebd9a049c51cff212f51b2dcd6909d35738/modelcif-0.1.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.1 2024-09-27T21:28:18,620 Found link https://files.pythonhosted.org/packages/c0/e4/41bb0130b42352675ae2190c3ac4ab34908e9e3f92b14c4551bcafc93564/modelcif-0.2.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.2 2024-09-27T21:28:18,620 Found link https://files.pythonhosted.org/packages/f4/05/3d5e25e1a99cc28e4460a895bbb57831c7107f5365a610d135fb581017ac/modelcif-0.3.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.3 2024-09-27T21:28:18,621 Found link https://files.pythonhosted.org/packages/d2/6f/c57d3c78010b217522695647886585df97053f625a4731221e60da5ca8ee/modelcif-0.4.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.4 2024-09-27T21:28:18,622 Found link https://files.pythonhosted.org/packages/b0/a6/6306671254961b83234c7796b5cb65e6fa1a60dda379e48d474984464842/modelcif-0.5.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.5 2024-09-27T21:28:18,623 Found link https://files.pythonhosted.org/packages/54/32/41d965a0d9eff134c58830ec90682fdb3b30ff59fcdf62a1ce5c51239a6e/modelcif-0.6.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.6 2024-09-27T21:28:18,623 Found link https://files.pythonhosted.org/packages/96/0f/60aa4379b16b5fc7062a7f05eede21feaab737cf14b753ec114d449ea887/modelcif-0.7.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.7 2024-09-27T21:28:18,624 Found link https://files.pythonhosted.org/packages/1d/50/9f731fabf3c6bf8a85b9555f395d12ad2eee45d88a8fecd332e4d85ea0a4/modelcif-0.8.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.8 2024-09-27T21:28:18,625 Found link https://files.pythonhosted.org/packages/5c/4b/b50a56ed6d2d335813809b27ae4ea9862415b62163c8c10459e7ce738490/modelcif-0.9.tar.gz (from https://pypi.org/simple/modelcif/), version: 0.9 2024-09-27T21:28:18,626 Found link https://files.pythonhosted.org/packages/9b/4d/d9022a7bc5b68468d52c8ba30ea1b7aa541c0ec5af91244dbc0f4e888f6b/modelcif-1.0.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.0 2024-09-27T21:28:18,626 Found link https://files.pythonhosted.org/packages/c7/58/f42d39b78ab2e6744dca79584acd59c3d2a767090b7328f3ebb886e61c56/modelcif-1.1.tar.gz (from https://pypi.org/simple/modelcif/), version: 1.1 2024-09-27T21:28:18,627 Fetching project page and analyzing links: https://www.piwheels.org/simple/modelcif/ 2024-09-27T21:28:18,628 Getting page https://www.piwheels.org/simple/modelcif/ 2024-09-27T21:28:18,629 Found index url https://www.piwheels.org/simple/ 2024-09-27T21:28:18,795 Fetched page https://www.piwheels.org/simple/modelcif/ as text/html 2024-09-27T21:28:18,799 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-1.0-py3-none-any.whl#sha256=4782652706712e4ec8216ac169d5060b3cad34baa38a64dfb61bc8dd167bb973 (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,799 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.9-py3-none-any.whl#sha256=3db0d4df7570020db1d55ff08c97436acfe5d1db7fd778a257670a53f4dd9a1a (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,800 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.8-py3-none-any.whl#sha256=0411d65fded5464fba7e793c6a01057251bf3cda9782219f108c950ce4c2098a (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,801 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.7-py3-none-any.whl#sha256=07d83425989a8fc2ea50033649cf34ec26f301302a4fdab4852cced4449eb416 (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,801 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.6-py3-none-any.whl#sha256=801425688ac82395addadb3b309f8997c14e82f54a1d1f496709629a7cf0120f (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,802 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.5-py3-none-any.whl#sha256=8147a5f6f13bbbc25f264598c5b811918c46052a31cd8dc0f96d61a5c1a1f10e (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,802 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.4-py3-none-any.whl#sha256=6f0b768aea5f824a71925aafb9a24ada80a01e46d092fa10d716fc618d17f306 (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,803 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.3-py3-none-any.whl#sha256=29e9f2d6e46ceb2eb0db7184254c7f08855642868169dc34c42598c1854fe1f0 (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,803 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.2-py3-none-any.whl#sha256=e33a96339a2aac8c856cb699699a0b0085e5a55589fb463f0c369d974a8314ac (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,804 Skipping link: No binaries permitted for modelcif: https://www.piwheels.org/simple/modelcif/modelcif-0.1-py3-none-any.whl#sha256=196dd0a0a4f66f3a926afb5bd2fee81d8e68eeb69a9e3c3daaeb388fad7d9467 (from https://www.piwheels.org/simple/modelcif/) 2024-09-27T21:28:18,805 Skipping link: not a file: https://www.piwheels.org/simple/modelcif/ 2024-09-27T21:28:18,805 Skipping link: not a file: https://pypi.org/simple/modelcif/ 2024-09-27T21:28:18,825 Given no hashes to check 1 links for project 'modelcif': discarding no candidates 2024-09-27T21:28:18,827 Collecting modelcif==1.1 2024-09-27T21:28:18,830 Created temporary directory: /tmp/pip-unpack-wqo04_q_ 2024-09-27T21:28:19,048 Downloading modelcif-1.1.tar.gz (65 kB) 2024-09-27T21:28:19,183 Added modelcif==1.1 from https://files.pythonhosted.org/packages/c7/58/f42d39b78ab2e6744dca79584acd59c3d2a767090b7328f3ebb886e61c56/modelcif-1.1.tar.gz to build tracker '/tmp/pip-build-tracker-hegvhqtv' 2024-09-27T21:28:19,184 Running setup.py (path:/tmp/pip-wheel-4u1ivanq/modelcif_cede1cad84134994846f305778f7b654/setup.py) egg_info for package modelcif 2024-09-27T21:28:19,185 Created temporary directory: /tmp/pip-pip-egg-info-t7hm6bom 2024-09-27T21:28:19,186 Preparing metadata (setup.py): started 2024-09-27T21:28:19,187 Running command python setup.py egg_info 2024-09-27T21:28:20,242 running egg_info 2024-09-27T21:28:20,244 creating /tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info 2024-09-27T21:28:20,272 writing /tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/PKG-INFO 2024-09-27T21:28:20,275 writing dependency_links to /tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/dependency_links.txt 2024-09-27T21:28:20,277 writing requirements to /tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/requires.txt 2024-09-27T21:28:20,278 writing top-level names to /tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/top_level.txt 2024-09-27T21:28:20,280 writing manifest file '/tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/SOURCES.txt' 2024-09-27T21:28:20,371 reading manifest file '/tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/SOURCES.txt' 2024-09-27T21:28:20,373 reading manifest template 'MANIFEST.in' 2024-09-27T21:28:20,375 adding license file 'LICENSE' 2024-09-27T21:28:20,378 writing manifest file '/tmp/pip-pip-egg-info-t7hm6bom/modelcif.egg-info/SOURCES.txt' 2024-09-27T21:28:20,487 Preparing metadata (setup.py): finished with status 'done' 2024-09-27T21:28:20,492 Source in /tmp/pip-wheel-4u1ivanq/modelcif_cede1cad84134994846f305778f7b654 has version 1.1, which satisfies requirement modelcif==1.1 from https://files.pythonhosted.org/packages/c7/58/f42d39b78ab2e6744dca79584acd59c3d2a767090b7328f3ebb886e61c56/modelcif-1.1.tar.gz 2024-09-27T21:28:20,492 Removed modelcif==1.1 from https://files.pythonhosted.org/packages/c7/58/f42d39b78ab2e6744dca79584acd59c3d2a767090b7328f3ebb886e61c56/modelcif-1.1.tar.gz from build tracker '/tmp/pip-build-tracker-hegvhqtv' 2024-09-27T21:28:20,497 Created temporary directory: /tmp/pip-unpack-gkoiwi4d 2024-09-27T21:28:20,498 Created temporary directory: /tmp/pip-unpack-iqxa33mm 2024-09-27T21:28:20,499 Building wheels for collected packages: modelcif 2024-09-27T21:28:20,503 Created temporary directory: /tmp/pip-wheel-1ctnj7w2 2024-09-27T21:28:20,503 Building wheel for modelcif (setup.py): started 2024-09-27T21:28:20,505 Destination directory: /tmp/pip-wheel-1ctnj7w2 2024-09-27T21:28:20,505 Running command python setup.py bdist_wheel 2024-09-27T21:28:21,535 running bdist_wheel 2024-09-27T21:28:21,667 running build 2024-09-27T21:28:21,667 running build_py 2024-09-27T21:28:21,701 creating build/lib/modelcif 2024-09-27T21:28:21,703 copying modelcif/alignment.py -> build/lib/modelcif 2024-09-27T21:28:21,705 copying modelcif/model.py -> build/lib/modelcif 2024-09-27T21:28:21,708 copying modelcif/reader.py -> build/lib/modelcif 2024-09-27T21:28:21,711 copying modelcif/__init__.py -> build/lib/modelcif 2024-09-27T21:28:21,713 copying modelcif/reference.py -> build/lib/modelcif 2024-09-27T21:28:21,715 copying modelcif/descriptor.py -> build/lib/modelcif 2024-09-27T21:28:21,717 copying modelcif/associated.py -> build/lib/modelcif 2024-09-27T21:28:21,720 copying modelcif/dumper.py -> build/lib/modelcif 2024-09-27T21:28:21,723 copying modelcif/data.py -> build/lib/modelcif 2024-09-27T21:28:21,724 copying modelcif/qa_metric.py -> build/lib/modelcif 2024-09-27T21:28:21,727 copying modelcif/test.py -> build/lib/modelcif 2024-09-27T21:28:21,729 copying modelcif/protocol.py -> build/lib/modelcif 2024-09-27T21:28:21,731 creating build/lib/modelcif/util 2024-09-27T21:28:21,732 copying modelcif/util/make_mmcif.py -> build/lib/modelcif/util 2024-09-27T21:28:21,735 copying modelcif/util/__init__.py -> build/lib/modelcif/util 2024-09-27T21:28:21,765 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-09-27T21:28:21,766 !! 2024-09-27T21:28:21,767 ******************************************************************************** 2024-09-27T21:28:21,768 Please avoid running ``setup.py`` directly. 2024-09-27T21:28:21,768 Instead, use pypa/build, pypa/installer or other 2024-09-27T21:28:21,769 standards-based tools. 2024-09-27T21:28:21,770 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-09-27T21:28:21,771 ******************************************************************************** 2024-09-27T21:28:21,772 !! 2024-09-27T21:28:21,772 self.initialize_options() 2024-09-27T21:28:21,794 installing to build/bdist.linux-armv7l/wheel 2024-09-27T21:28:21,795 running install 2024-09-27T21:28:21,819 running install_lib 2024-09-27T21:28:21,846 creating build/bdist.linux-armv7l/wheel 2024-09-27T21:28:21,848 creating build/bdist.linux-armv7l/wheel/modelcif 2024-09-27T21:28:21,850 copying build/lib/modelcif/alignment.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,852 copying build/lib/modelcif/model.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,854 copying build/lib/modelcif/reader.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,857 copying build/lib/modelcif/__init__.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,860 copying build/lib/modelcif/reference.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,862 copying build/lib/modelcif/descriptor.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,864 copying build/lib/modelcif/associated.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,866 copying build/lib/modelcif/dumper.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,870 creating build/bdist.linux-armv7l/wheel/modelcif/util 2024-09-27T21:28:21,871 copying build/lib/modelcif/util/make_mmcif.py -> build/bdist.linux-armv7l/wheel/./modelcif/util 2024-09-27T21:28:21,873 copying build/lib/modelcif/util/__init__.py -> build/bdist.linux-armv7l/wheel/./modelcif/util 2024-09-27T21:28:21,875 copying build/lib/modelcif/data.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,877 copying build/lib/modelcif/qa_metric.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,879 copying build/lib/modelcif/test.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,880 copying build/lib/modelcif/protocol.py -> build/bdist.linux-armv7l/wheel/./modelcif 2024-09-27T21:28:21,882 running install_egg_info 2024-09-27T21:28:21,917 running egg_info 2024-09-27T21:28:21,943 writing modelcif.egg-info/PKG-INFO 2024-09-27T21:28:21,946 writing dependency_links to modelcif.egg-info/dependency_links.txt 2024-09-27T21:28:21,948 writing requirements to modelcif.egg-info/requires.txt 2024-09-27T21:28:21,949 writing top-level names to modelcif.egg-info/top_level.txt 2024-09-27T21:28:21,980 reading manifest file 'modelcif.egg-info/SOURCES.txt' 2024-09-27T21:28:21,984 reading manifest template 'MANIFEST.in' 2024-09-27T21:28:21,985 adding license file 'LICENSE' 2024-09-27T21:28:21,989 writing manifest file 'modelcif.egg-info/SOURCES.txt' 2024-09-27T21:28:21,991 Copying modelcif.egg-info to build/bdist.linux-armv7l/wheel/./modelcif-1.1-py3.11.egg-info 2024-09-27T21:28:22,000 running install_scripts 2024-09-27T21:28:22,013 creating build/bdist.linux-armv7l/wheel/modelcif-1.1.dist-info/WHEEL 2024-09-27T21:28:22,015 creating '/tmp/pip-wheel-1ctnj7w2/modelcif-1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-09-27T21:28:22,020 adding 'modelcif/__init__.py' 2024-09-27T21:28:22,021 adding 'modelcif/alignment.py' 2024-09-27T21:28:22,023 adding 'modelcif/associated.py' 2024-09-27T21:28:22,025 adding 'modelcif/data.py' 2024-09-27T21:28:22,026 adding 'modelcif/descriptor.py' 2024-09-27T21:28:22,030 adding 'modelcif/dumper.py' 2024-09-27T21:28:22,032 adding 'modelcif/model.py' 2024-09-27T21:28:22,034 adding 'modelcif/protocol.py' 2024-09-27T21:28:22,035 adding 'modelcif/qa_metric.py' 2024-09-27T21:28:22,040 adding 'modelcif/reader.py' 2024-09-27T21:28:22,042 adding 'modelcif/reference.py' 2024-09-27T21:28:22,044 adding 'modelcif/test.py' 2024-09-27T21:28:22,045 adding 'modelcif/util/__init__.py' 2024-09-27T21:28:22,047 adding 'modelcif/util/make_mmcif.py' 2024-09-27T21:28:22,049 adding 'modelcif-1.1.dist-info/LICENSE' 2024-09-27T21:28:22,050 adding 'modelcif-1.1.dist-info/METADATA' 2024-09-27T21:28:22,051 adding 'modelcif-1.1.dist-info/WHEEL' 2024-09-27T21:28:22,052 adding 'modelcif-1.1.dist-info/top_level.txt' 2024-09-27T21:28:22,053 adding 'modelcif-1.1.dist-info/RECORD' 2024-09-27T21:28:22,055 removing build/bdist.linux-armv7l/wheel 2024-09-27T21:28:22,173 Building wheel for modelcif (setup.py): finished with status 'done' 2024-09-27T21:28:22,176 Created wheel for modelcif: filename=modelcif-1.1-py3-none-any.whl size=41030 sha256=9357ab5c7d66b9a2444151cdf7d49a859b138f1e2ad44142321b0ac1b3d0342b 2024-09-27T21:28:22,177 Stored in directory: /tmp/pip-ephem-wheel-cache-yhna69s4/wheels/30/44/e6/d0f8e5852306e9a28b2cf53c214bc376a4fca9a59504e186d0 2024-09-27T21:28:22,188 Successfully built modelcif 2024-09-27T21:28:22,192 Removed build tracker: '/tmp/pip-build-tracker-hegvhqtv'